LOCUS       DAWEYF010000001        56503 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.001, whole genome shotgun sequence.
ACCESSION   DAWEYF010000001 DAWEYF010000000
VERSION     DAWEYF010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 56503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56503
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.001"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            52..1005
                     /locus_tag="WGN93_000001"
     CDS             52..1005
                     /locus_tag="WGN93_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ0225981.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDEMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1122..1445)
                     /locus_tag="WGN93_000002"
     CDS             complement(1122..1445)
                     /locus_tag="WGN93_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0225982.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1618..2979)
                     /locus_tag="WGN93_000003"
     CDS             complement(1618..2979)
                     /locus_tag="WGN93_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ0225983.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAAHRLVMIGDAAERYQEDPVRILRAIRLSGKLGFDLSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPVPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAADRHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            complement(3334..5034)
                     /gene="recJ"
                     /locus_tag="WGN93_000004"
     CDS             complement(3334..5034)
                     /gene="recJ"
                     /locus_tag="WGN93_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ0225984.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVSLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDTEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQMTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTFITDGSLPARDITLEQAQNLAKHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
     gene            complement(5103..5819)
                     /locus_tag="WGN93_000005"
     CDS             complement(5103..5819)
                     /locus_tag="WGN93_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0225985.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVELDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTKKHTDKSKLFENIAYTPTTLILDAV
                     GAVLALPVAALIAATNSSDK"
     gene            complement(5866..6378)
                     /locus_tag="WGN93_000006"
     CDS             complement(5866..6378)
                     /locus_tag="WGN93_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ0225986.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAIVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPNADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MESQGGTGEA"
     gene            6532..7863
                     /gene="pmbA"
                     /locus_tag="WGN93_000007"
     CDS             6532..7863
                     /gene="pmbA"
                     /locus_tag="WGN93_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ0225987.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8160..8363)
                     /locus_tag="WGN93_000008"
     CDS             complement(8160..8363)
                     /locus_tag="WGN93_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ0225988.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8606..8908
                     /gene="clpS"
                     /locus_tag="WGN93_000009"
     CDS             8606..8908
                     /gene="clpS"
                     /locus_tag="WGN93_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ0225989.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8910..11201
                     /gene="clpA"
                     /locus_tag="WGN93_000010"
     CDS             8910..11201
                     /gene="clpA"
                     /locus_tag="WGN93_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ0225990.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLDRDLKNMVYGQENAIDALVTAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSMGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPGLGF
                     TAKREHGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTPALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTALA"
     gene            complement(11241..14339)
                     /locus_tag="WGN93_000011"
     CDS             complement(11241..14339)
                     /locus_tag="WGN93_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ0225991.1"
                     /translation="MSLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSKPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKKLSAAENRQALL
                     HPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKVATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEEYMNGYIDDRTG
                     EVRRGYLDVAKELRERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QSVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEALNETA
                     AKRYLISSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGT
                     DI"
     gene            complement(14336..15475)
                     /locus_tag="WGN93_000012"
     CDS             complement(14336..15475)
                     /locus_tag="WGN93_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ0225992.1"
                     /translation="MGRSLTEIAEQLKGSNKKVQLIYAFNGTGKTRLSGEFKNLIAPT
                     SSEGADGEPTRRKFLYYNAFTEDLFFWDNDLLANEAPRLKIQKNSFTDWLLRDNGLDG
                     AVIKNFQYYTDDKLTPDFNDNFSEIVFYFARGNDEQIENIKISKGEESNFIWSIFYVL
                     IRQVIAELNIPEDSEEGRSTDQFDDLEYIFIDDPVSSLDENHLIQQAVDLADLIKSSE
                     SELKFIITTHNVLFYNVLYNELKLKNKNGSYLLLKNEDGSFDILEKRGDSNKSFSYHL
                     HLKGVIEKAIQNQQVERFHFILLRNLYEKTANFLGYEEWSNLLPEDGRQNYFQRIINF
                     TSHSTLSNEEFIEPTRQEQETIKLLLKHLLDNYNFFQSNEQRDNP"
     gene            complement(15518..16723)
                     /locus_tag="WGN93_000013"
     CDS             complement(15518..16723)
                     /locus_tag="WGN93_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ0225993.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGEVAEIGTGSSNRQDEEHDG
                     EYPFYVRSKNILRSSTYQFNETAIIIPGEGGIGDIFHYAEGKYALHQRAYRVHVVIPD
                     LSPKFLYYFMNVDFKRYIQAKSVGATATSIRKPMLQRFPIPIPPLETQQKIVKILDKF
                     TELEATLEAELALRKRQYQYYRDFLLDFDNQIGGGADGYQCRLKDVVWKTLGEVTLPT
                     ENIKWKYTDKIYQYIDLTSVSREYKTITDTIAISANNAPSRAQKIVKEHDVIFATTRP
                     TLQRFTIISKKFSGEIASTGYCVLRANCKEVLPKWIYYQISTERFNQYVEVNQSGSAY
                     PAISDAKVKEFKIPIPSLPEQEKIVAILDKFDTLTHSISEGLPYEITLRRKQYEYYRE
                     QLLAFPKAA"
     gene            complement(16889..17899)
                     /locus_tag="WGN93_000014"
     CDS             complement(16889..17899)
                     /locus_tag="WGN93_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ0225994.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQF
                     RQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(17896..19440)
                     /locus_tag="WGN93_000015"
     CDS             complement(17896..19440)
                     /locus_tag="WGN93_000015"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ0225995.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTKPKLKDSKPFDAVVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEISETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(19513..20517)
                     /gene="rfaD"
                     /locus_tag="WGN93_000016"
     CDS             complement(19513..20517)
                     /gene="rfaD"
                     /locus_tag="WGN93_000016"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ0225996.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            complement(20646..21677)
                     /locus_tag="WGN93_000017"
     CDS             complement(20646..21677)
                     /locus_tag="WGN93_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ0225997.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPFIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEILLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKN"
     gene            complement(21679..22914)
                     /gene="dcm"
                     /locus_tag="WGN93_000018"
     CDS             complement(21679..22914)
                     /gene="dcm"
                     /locus_tag="WGN93_000018"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ0225998.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(22951..23922)
                     /gene="hldA"
                     /locus_tag="WGN93_000019"
     CDS             complement(22951..23922)
                     /gene="hldA"
                     /locus_tag="WGN93_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ0225999.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(23977..24717)
                     /gene="pyrF"
                     /locus_tag="WGN93_000020"
     CDS             complement(23977..24717)
                     /gene="pyrF"
                     /locus_tag="WGN93_000020"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ0226000.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(25243..25890)
                     /gene="adk"
                     /locus_tag="WGN93_000021"
     CDS             complement(25243..25890)
                     /gene="adk"
                     /locus_tag="WGN93_000021"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ0226001.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            26105..26944
                     /gene="htpX"
                     /locus_tag="WGN93_000022"
     CDS             26105..26944
                     /gene="htpX"
                     /locus_tag="WGN93_000022"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ0226002.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(27247..27807)
                     /locus_tag="WGN93_000023"
     CDS             complement(27247..27807)
                     /locus_tag="WGN93_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226003.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(27921..28313)
                     /locus_tag="WGN93_000024"
     CDS             complement(27921..28313)
                     /locus_tag="WGN93_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ0226004.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(28521..28913)
                     /locus_tag="WGN93_000025"
     CDS             complement(28521..28913)
                     /locus_tag="WGN93_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ0226005.1"
                     /translation="MAKSFNQAASELTDIFPNISLTDFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(29030..29440)
                     /locus_tag="WGN93_000026"
     CDS             complement(29030..29440)
                     /locus_tag="WGN93_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ0226006.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(29454..29891)
                     /locus_tag="WGN93_000027"
     CDS             complement(29454..29891)
                     /locus_tag="WGN93_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ0226007.1"
                     /translation="MKISIFWLYNAFILERSIMPKSLSLQDVQLRFSSKFPDKTVLKF
                     TKNYEPVTIQCPLHGSVVYGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGE
                     IYEFASTLAASKFIGCSNSTLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(30303..31601)
                     /locus_tag="WGN93_000028"
     CDS             complement(30303..31601)
                     /locus_tag="WGN93_000028"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ0226008.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGWRESTFGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(31705..32856)
                     /locus_tag="WGN93_000029"
     CDS             complement(31705..32856)
                     /locus_tag="WGN93_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ0226009.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGAVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTIERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            33191..34570
                     /gene="norM"
                     /locus_tag="WGN93_000030"
     CDS             33191..34570
                     /gene="norM"
                     /locus_tag="WGN93_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ0226010.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFIDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            34749..35789
                     /gene="murB"
                     /locus_tag="WGN93_000031"
     CDS             34749..35789
                     /gene="murB"
                     /locus_tag="WGN93_000031"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ0226011.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            35801..36451
                     /locus_tag="WGN93_000032"
     CDS             35801..36451
                     /locus_tag="WGN93_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ0226012.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            36506..37303
                     /locus_tag="WGN93_000033"
     CDS             36506..37303
                     /locus_tag="WGN93_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ0226013.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTIDLNQDSAFQSANLARDTSFWRHHANKPVWFCLLPPSSLTHYADTVKQWA
                     ELARACNVQHLIFTSSTSVYGDTARECDEIALPDPQTESARQILAAEQHLLDSGVPNI
                     DILRLGGLYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPSGRRLKN
                     IIEPRHPTRREFFTEEAAKLGLPAPDFAPDDSVGKIIRTVCDNGLSL"
     gene            37354..37920
                     /locus_tag="WGN93_000034"
     CDS             37354..37920
                     /locus_tag="WGN93_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ0226014.1"
                     /translation="MSAFLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGRFSREPESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            37940..38830
                     /locus_tag="WGN93_000035"
     CDS             37940..38830
                     /locus_tag="WGN93_000035"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ0226015.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            38855..39613
                     /locus_tag="WGN93_000036"
     CDS             38855..39613
                     /locus_tag="WGN93_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ0226016.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NHWEGDTGRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(39668..40333)
                     /locus_tag="WGN93_000037"
     CDS             complement(39668..40333)
                     /locus_tag="WGN93_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ0226017.1"
                     /translation="MAVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(40533..41429)
                     /locus_tag="WGN93_000038"
     CDS             complement(40533..41429)
                     /locus_tag="WGN93_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ0226018.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTIARLTMTVYLPAEQKGTHMS
                     RFVALMEQHAEALDFAQLRKLTTEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVCLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            41498..42655
                     /locus_tag="WGN93_000039"
     CDS             41498..42655
                     /locus_tag="WGN93_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ0226019.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKVLAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPLDCWLVLRGIKTLALRMEAHCKNALEIARRLEDHPAIEKVFY
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(42718..43719)
                     /gene="hemB"
                     /locus_tag="WGN93_000040"
     CDS             complement(42718..43719)
                     /gene="hemB"
                     /locus_tag="WGN93_000040"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ0226020.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEASNLGIPMLALFPVVTTNKTECAQEAYNPE
                     GLVPTAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(43902..44186)
                     /gene="yhbY"
                     /locus_tag="WGN93_000041"
     CDS             complement(43902..44186)
                     /gene="yhbY"
                     /locus_tag="WGN93_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ0226021.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            44296..44916
                     /locus_tag="WGN93_000042"
     CDS             44296..44916
                     /locus_tag="WGN93_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ0226022.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            44980..46947
                     /gene="ftsH"
                     /locus_tag="WGN93_000043"
     CDS             44980..46947
                     /gene="ftsH"
                     /locus_tag="WGN93_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ0226023.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            47168..47599
                     /locus_tag="WGN93_000044"
     CDS             47168..47599
                     /locus_tag="WGN93_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ0226024.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSVTLVEAFVKEADRRYA"
     gene            47592..47870
                     /locus_tag="WGN93_000045"
     CDS             47592..47870
                     /locus_tag="WGN93_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ0226025.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            47923..48501
                     /gene="pth"
                     /locus_tag="WGN93_000046"
     CDS             47923..48501
                     /gene="pth"
                     /locus_tag="WGN93_000046"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ0226026.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            48562..48768
                     /locus_tag="WGN93_000047"
     CDS             48562..48768
                     /locus_tag="WGN93_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ0226027.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            48765..49127
                     /locus_tag="WGN93_000048"
     CDS             48765..49127
                     /locus_tag="WGN93_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ0226028.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            49358..50773
                     /locus_tag="WGN93_000049"
     CDS             49358..50773
                     /locus_tag="WGN93_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13/DASS family transporter"
                     /protein_id="HEZ0226029.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVALLRLSRGSMKAAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKERKTYVFVLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            50892..51401
                     /locus_tag="WGN93_000050"
     CDS             50892..51401
                     /locus_tag="WGN93_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ0226030.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            51568..52950
                     /locus_tag="WGN93_000051"
     CDS             51568..52950
                     /locus_tag="WGN93_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ0226031.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMKIAIDAGNGVGGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPK
                     NLQDLIVELKNGEAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(52970..53725)
                     /locus_tag="WGN93_000052"
     CDS             complement(52970..53725)
                     /locus_tag="WGN93_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226032.1"
                     /translation="MIKIRNIHKTFGKNTILRGINLDVCKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(53735..54451)
                     /locus_tag="WGN93_000053"
     CDS             complement(53735..54451)
                     /locus_tag="WGN93_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ0226033.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(54441..55268)
                     /locus_tag="WGN93_000054"
     CDS             complement(54441..55268)
                     /locus_tag="WGN93_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0226034.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            55553..56461
                     /locus_tag="WGN93_000055"
     CDS             55553..56461
                     /locus_tag="WGN93_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ0226035.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKTRFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGHDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT        13556 a        15387 c        13757 g        13803 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgc
      361 accaagcgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatga gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt cgaccgtgtc
      661 accaagctga ttgaaaaagg tctgattgag attgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 ggcgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctttg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtatccg tatccgtttc tttatccgtc caaccgatac atcaatcgaa ttttctgcat
     1141 cggattgcct catcttcgca aaacattgcc gaagtttcgc ggttgcacgc ctgacgcact
     1201 ttctgccgcg ccacgccttc attccgatcg cttgcctcaa acgtcttctg aaaaggcgta
     1261 acgctgcata catacatggt ggaatttgaa ccgaaaaggt cgattttgac ggtattgctg
     1321 ccgctttcca atacggcgac acggtgttcc aactgcgcca gacgtgcttc caaatcgccg
     1381 attctgtcgg caaatgcagg catggcggca cacgcggtca aaatgcccaa aatacatttt
     1441 ttcatcaatt tttccttgtt tcttgaaccc tacccacccg gacatccttt ttccgagagg
     1501 cagggtcaga ctttatttac ggggatgaat ccccttacaa atcaggataa tacatagaac
     1561 ggcactttat gcttcatccc atgtgttgaa acttcattgc tccttgtctg ttgaccctta
     1621 ttcccaatcc gttccctcaa ccttcggctt gggtttgcgc ctgcgacggc ggcgtttttt
     1681 cgcctgtcct tcgttttttt cgtgtcggtc ggcggcttcg tttttggtca tctccgaccg
     1741 ctgttccgtc gatgccgtct gaaacgccgt ccaccactcg gcaagggcgc ggtccgcatt
     1801 gccggtttcg gcgcgcaaga gcaggaaatc ataggcggca cggaaacgcg cctgtgcaaa
     1861 cagtttgtgc ggccttgcgc ctttgcggtt ttcaaactgc ggctggaaca tccaaatttc
     1921 gcgcatcgtg gcggaaaagc gttgcggtac gccccaaccg cgttcgacgg tttcgcgcat
     1981 cgtattgatt gcatcggaca gggcgggcac gggtttcaaa ccctgttgca gattgctttt
     2041 ccaatggcgt tccaactccg gccacatcag ggccgccagt acgaaaccga ccgaaaccga
     2101 tttgtcggca cgcagccgct catcggtatt tttcagggca agcaccgtca tttttccggc
     2161 gatgccgtct gaaacgcgca aagcattgag cagcggatgg atgtcgtccg gtatgtcaaa
     2221 tccgttcaaa cgtttcagac actcgcgagc gtgccctgaa aacagcaatt tcataatttc
     2281 gtcgaacagc ctcgctaccg gttcgtgctt cagacggcat atcgattcgg caatcggtgc
     2341 ggcggtttct tccgacagat caaagcccaa tttgcccgac aggcggatgg cgcgcaaaat
     2401 cctgacaggg tcttcctgat agcgttcggc ggcatcgcca atcataacca gcctgtgggc
     2461 ggcaacatcg gcaatcccgt tgtggaaatc caaaatctct tctttttcag gatcgtaata
     2521 caaggcattg caggtaaaat cgcgccgcat cgcatcttct tcgatgctgc cgtaggtgtt
     2581 gtccttcatg attctgccgt gcgcgttctg atgaaccttt gcaccgccgc gaaacgtcgt
     2641 tacttcgata atctccgcac cgttcatcac atggacaatc tgaaaacgcc tgccgatgat
     2701 gcggctgcgg cggaagagtt tgtgcacctg ttcgggcgtg gcatcggttg ccacatcgaa
     2761 atccttgggt tcgatgccga gcagcaggtc cctgaccgcg ccgccgacca cataagcctg
     2821 aaaccccgcc cctttcaggc ggcgtatgac gttttcggcg gcaaagctca acatttcggc
     2881 acggatgttg tgtctttcgg caggaatgac cgttttactt tccgcttttt tactgctccg
     2941 accggaaggc agcatcttat tcaaccattt tttcagcata aatattctga cccgaagagc
     3001 ggcatctcca cgggcaaccg tgttcagacg gcatcgggcg caggtttgca agatgccgta
     3061 accataaaca aaaggcgtag aaactacgcc gtccgaatca cgccgccctc gcggcggcaa
     3121 cgcgtcatta taacagattg ccctccaaaa aaatcagacc ctgcttttgt ggcggagtct
     3181 gaaatttgat gcaccttata tattgcgtcc ctaagaaagg atgattaaca aaaattaacg
     3241 ccctttactt tcttttccga ttgggaacat tcccgtcgta caaacaggca aatgaaggaa
     3301 cagaaatcac attcaaacgg cgttccgccg cctctacgcc gcttcccagt agtcgatata
     3361 aagctgcaat tcgaggttgt tgcgccattc gttggcaacg gggcggtaca ccgtgcggat
     3421 gtattcgggg atgtcttcgc tgcaacgcca aaacatcgct tcaaattcgc agccgtcttt
     3481 ttgcagccag acttttttgt gtttgccctc cgcgcccaaa ggttgctggc ggacgacgtg
     3541 gaactcgtcg gtaaaactcg gcggcgcgaa gccctgcccc caaacgtgtt tagcaaggtt
     3601 ttgcgcctgt tccagcgtaa tgtcgcgtgc aggcaggctg ccgtcggtga tgaaggtttg
     3661 cgacaaatcg tcttcgcaca ccatttcgcg cacggcttct tcaaaggccg tctgaaacgc
     3721 gggaatgttg tgttcgagta tgctcaagcc cgccgccatc gcgtgtccgc cgaatttcaa
     3781 aatcaaatcg ggatggcgtt tggacaccaa gtccaaagca tcgcgcaagt gaagattggg
     3841 aatggaacgc cccgaaccgc gcacttcacc gttgtcggca ggcgcaaaca cgatggtcgg
     3901 acgataaaaa cggtctttga ggcggctggc aacgatgccg accacgcctt gatggaagtc
     3961 gtcgcgatac gccaccaaag tcatctgacc tgaaggcagg gtttcaggaa aagcattcag
     4021 cgcgtcttgc agcatagact gctcgatttc gcgacgttcg atattgaggt tgtttaactg
     4081 cgccgccagt tcctgcgcct cggtatcatc tcgcgccaac aggcaggcaa taccgaccga
     4141 catatcgtcc agccgtccgg cggcgttgat gcgcgggccc aacgcaaaac ccatatcaaa
     4201 cggctgcgcc ttgcgccaat cgcgccgcgc cacttcaaac aaggcgcgga taccggggcg
     4261 cattttgccg gagcgcatcc gtttcaaacc ttgcgacacg aggatgcggt tgttgtgatc
     4321 gagggagacg acgtcggcaa cggtaccgag tgcgaccaaa tccaaaaggt cgcccagatt
     4381 cggctctttt aggccgtctg aaaaataatt gcggcggcgc agttcggcac gcaaagccat
     4441 cagtacataa aaaatcacgc ccacgcccgc caagcttttg ctttggaaac cgcagccttt
     4501 ttggttcgga ttgacgatga tgcagtctgg cacggtctcg gcaggcagat ggtggtcggt
     4561 tacaatcaca tccaaaccca attcctgcgc acgcgccacg cctgcgatgc tggcaatgcc
     4621 gttatcaacc gtaatcagca aatccacgcc ttgcgcggcg gcgatttcgg ccagctcggg
     4681 cgttaaaccg tagccgtgtt caaagcggtt gggcacgagg aaatctactt ttgcccccat
     4741 cgccgccaaa ccgtccaaac cgacggcaca cgcggtcgcg ccgtcggcat cgtagtcggc
     4801 gacaatcaag attttttcct gacgctcaac cgcatccgcc aaacggcggg cggcggcttc
     4861 gcaattcgtc agcgtttgat aaggcaggag ggaagcgagt ttgtcgtcca attcggcagg
     4921 actttgcaca ccgcgcgagg cacaaagccg ggcgattaaa ggatcggcgc cggcggtgag
     4981 caaatgattg aaaacgtcgg tattgacgga tcgggtttgg attttgacgg acatagcgtg
     5041 gaactttaca gtgcggatgt gtttgaaatg ccgtctgaag gcttttcaga cggcattgcc
     5101 gttcatttgt ctgaggaatt cgtggctgca atcaacgccg cgacaggcaa ggccagcacc
     5161 gcgcccaccg catccagtat caacgtggtg ggcgtatatg caatattttc aaacaacttg
     5221 gatttgtcgg tatgtttttt cgtaaccgtg taataaatat cggcaggcac actttgctca
     5281 aaatgataat cggcgttcag tttttgcggt gtggcgtagt atttgccttt ggcggatacg
     5341 cagcgcgtgt aaatagtccg attgtcaagt tcgaccgctt caaacccgag ctgtttcagc
     5401 ttggcgatgt cggcaggctt gtcggtatcg tagcgcaggc aaaggccttc ggtactgaaa
     5461 ttctggctgc caggcgattc gagtttgacc ggcagggctt ggtggcgagc atagctcggg
     5521 gtatcctcaa ctatttggaa gggtttgtcc agccctgcct tcaaaatgcc cgtcagcttc
     5581 gccgaatctt cgggattgac gacgaaccag tatttcccgc ccatcatcac cagactgccc
     5641 ttttccaatt gggcattgtc tttggcaacc acaccgaagg cgcggatttg atccttgtca
     5701 acgtgtttat aggcggtcgt ttggctgaac gggtcgttca tgccccacat cattgccgta
     5761 cagccgttca acatcaaggc tgccgccaaa acggcggcgg tcgttttacg gaacaacatt
     5821 ttatcttcca atcagaatga cggcggatgc cgtctgaaaa tatgcctagg cttcccctgt
     5881 tccgccttgg ctttccataa cggttttcaa ctcttgaaac agggcgcgga aatttttcgg
     5941 cggtttgttc tgttcctgtt cttttttggt attgcggatg agcgtcctca gcttgcccgc
     6001 atcggcgttt ggaaaatcgg acataaactg cgtcagcgcg ccgtcgtccg ccagcagctc
     6061 catccgcgtc cgctccacac gttgcaaaaa ggcgttgtgc gccgcatcgt cgccgcgcag
     6121 cttggcaaga aatgcctcga tgggcgcggg atcggtatcg cgcatcagtc tgccgataaa
     6181 ttgcgcctgc cgcttgagcg cgccgttgga tgtgattttt ttataggtaa cgatggcttc
     6241 gtacaaatct tcgtccaagc cgattttttt caacgtgtcg cttgagagct tggtcagctc
     6301 catacccaaa tcctgcaaac cgttcatctg ctttttcatt tgggttttgc tgacccattc
     6361 gtcttcttgt tcaaacatct tcattctcaa attttatccg acgggcgcat tttaacagaa
     6421 tgattccgcg ttcagacggc attttgcacc gtccgccctg caaacggacg cttttgcccc
     6481 tgccgcccga aacggttaaa atgccgcaac gctccaccaa gaaagatttc tatgctgttc
     6541 aaccacaccg cttccgaact tctcgacctc tgccgccgca cgctcgactt ggcaaaagca
     6601 gcgggcgcga ccgccgccga agccgatttc agcgaatcca tcggacaaag cgtcagcgtg
     6661 cggctgggcg aaatcgaaca aatcgagttc cagcaggaca agtcgctgga cattaccgtt
     6721 tacgtcggca aacgcaaagg ccgcgctggc accgccgatt tctccgaaca agccctgcgc
     6781 gacaccgtcc gcgccgccgc cgacatcgcc cgccacaccg ccgaagacgg ttgcgccgga
     6841 cttgccgatg cctgtctgat ggcaaaacac atcggcgacc ccgaccttta ccacgaatgg
     6901 gatttggata cggaagccgc cgtcggcttg gcaaaacaat gcgaacaagc cgccctgaac
     6961 gaggatgagc gcatcgaaaa ctccgaaggc gcggcggtgc aaaccggcca ttaccaatac
     7021 gtttacggca acacccacgg ttttgccgca caccggcaag gcacgcacca cagcatttcc
     7081 tgcagcgtcg ttgccgccga cgaaaacggc atgcagcgcg actactggta cgattccgcc
     7141 tgccgccatc cggatatgga cagccccgaa accatcggtc aaaccgccgc ccgccgcact
     7201 ttgcgccgac tcggcagccg cagcatcccg acaggcagct accccgtcct cttcgatacc
     7261 accgtttcgg gcggtcttat cggacacctc gtcggcgcac tctccggcgg cgcgctctac
     7321 cgccaaagca gtttcctgat cgacagcatc ggcaaaaaag tcctgcccga tttcctcaac
     7381 ctgcgcgaag aaccgcacat cccccgctct ttccgcagca gctattttga tgcggaaggc
     7441 gttgccaccg cgccgcgctt cgtgattcaa aacggcattg tcgaaggcta tttcctcagc
     7501 agttacagcg cgcgcaaact cggtatgcag accacgggca acgccggcgg cgcgcacaac
     7561 ctgtatttga accatacgca cgaaacgcaa tccgacctgc tgaaagaaat ggggacggga
     7621 ttgttggtaa ccgaactgat gggacagggc gcgaacacca ttaccggtga ctactcgcgc
     7681 ggcgcggcgg gtttttgggt ggaaaacggc gtgattgcct accccgtcca cgagattacc
     7741 gtagccggac gcttgcagga tatgtaccgc gacattgtcg gcgtggcgga tgacgctttg
     7801 cggcgttcgt ccaacaaaat cggctcgatt ctgattgcgg ggatgacggt tgccggaagc
     7861 tgaacgccct gccgatgccg tctgaagacg aaggcagcac gttttgcccc gtgcctgccc
     7921 gtttgccgtt ttatgccgca ccgccttttg ccgacaacat tgcacatttt ttcatcagca
     7981 ctgattttcc cttatccgtc aaaatactaa gccacttgtc cacaacaggg tacacacaag
     8041 ttcaggataa ggcgtgcggg gattggggtt tttccgccgc cggcaaaacg gcagacaaaa
     8101 acggcgggac attgcctgtc ccgccgtttt caaatataca tttgaccgta catcaggaat
     8161 taagcagcct gaatgttggc ggcctgtttg cctttagggc cggtggttac gtcgaaagag
     8221 acacgttggc cttctttcag ggttttgaaa ccttccatat tgattgctga gaagtgagcg
     8281 aacaaatctt cgccgccttc atcaggcgtg atgaaaccaa aacctttagc gtcgttaaac
     8341 cattttacga taccggttgc cattagaaac ttcctatact caaaaattaa caaaatcagc
     8401 aaaacaaggc atacggcaaa ccgagccgtc tggcgttcct tccagcttga tatactcggc
     8461 ggatgcccaa tcctgcttaa ccgtcttttt acatttgtta agacaaaacg tcaagctatg
     8521 ttttcaaaaa agtgggaaaa taggcaaaag taccgaaaat acaacaaaaa tgccgtctga
     8581 acgcggcttt caaatgggac acactatgac cgcgcaacac caatccgaca cgctcttgca
     8641 ccgtctgaac accctgccgc cgaaacgtta cggcgttttc ctattgaacg acgattacac
     8701 cacgatggaa tttgtcgttg aaatcctgac cgaaatcttc atgctcggac aagaacaggc
     8761 ggtagcggta atgctcttgg ttcatcacga aggcaaaggc ctgtgcggca cttacacgcg
     8821 cgatattgcc caaaccaaac agcaacaagt catgcagcgg gcaaaagccg aagggcatcc
     8881 gctgcaatgt attgtcgagg agatttaata tgcttgcacc cgaattggaa cagattttgc
     8941 agcagcttta ccgcgaggcg cgtaaggctc attatgaatt tatcagcctc gagcatctgc
     9001 ttttggtact catcgaagaa gatgcctccg tgccgaacgt cttaaaactc tgcggcgcgg
     9061 atttgaaagt ggtgtccgaa cagctcgccg ccagcgttgc cgaaaacacc cccctgattc
     9121 ccgaacacct tttagacacg gtcgaaaccc ggcccacgct cggcttccaa cgcgtgatgc
     9181 aacgggcgat ggtgcatacc cagtctgccg gaaaagccgc agtcgaaccg ttggacgttt
     9241 tggtcgcgct gatgagcgaa accgacagcc acaccgtcta tttcctcaag ctgcaatcgg
     9301 ttacgcgttt tgaagttttg cgctgtattg cccacggctc tcccgatgaa gatgaagacg
     9361 atggcaacta ttcttcagac ggcatggacg acgataatga aaaccgcacc aaaccgggca
     9421 aaaacccttt atcggcgtac accgtcaacc tcaacgccga agtcaaagcc ggccgtatcg
     9481 accctttgat tggtcgcaaa cacgaaatgg aacggctggt gcaaatccta tgccgccgcc
     9541 gcaaaaacaa tccgcttttg gtcggcgaag cgggcgtggg caaaaccgcg ctggcggaag
     9601 ggctggcaca tcaaatcgtc aacggcggca ttccagacgc gctcaaagat gccgaagtgt
     9661 acgcgctgga tatgggctcg ctgttggcgg gcacgaaata ccgcggcgac tttgaagcgc
     9721 gggtcaaatc cgtcttgaaa cagctcgaaa aaatcccgca cgccattttg tttatcgacg
     9781 aaatccacac catcatcggc gcaggcagca ccagcggcgg caccatggac gcgtccaacc
     9841 tgctcaaacc cgcgctggca aaaggttcgc tgcgctgcat cggcgcgacc acttacgacg
     9901 aataccgcac cattttcgac aaagaccacg ccttaagccg ccgcttccaa aaaatcgacg
     9961 tggtcgaacc caccgtttcc gaaaccgtac aaatcctgcg cggcttgaag ccgatgtttg
    10021 aagccttcca ccaagtccgc tatacgcaag gcgcactcga agccgccgcc gaactctccg
    10081 cacgctacat caacgagcgt ttcctgcccg acaaagccat cgacgtgatg gacgaagcag
    10141 gcgcggcgca acggattctg cccaaatcca aacagaaaaa agtcatcggc aaagcacaaa
    10201 ttgaaaccgt catcgccaaa gtcgcgcgga ttcccgaaaa aaccgtgtcg cacgacgaca
    10261 aacaagtgtt gcaattcctc gaccgcgatt tgaaaaacat ggtttacggt caggaaaacg
    10321 ccatcgacgc gttggttacc gccgtcaaaa tgtcgcgctc cggccttgcc ctgcccgaca
    10381 aaccgatagg cagtttcctc ttctccggtc cgaccggcgt gggcaaaacc gaagccgcca
    10441 aacagcttgc ctactcgatg ggcgtaccgc tgcaacgctt tgatatgtcc gaatacatgg
    10501 aacgccatgc cgtatcacga ctcatcggcg cgcctccggg ctacgtcggc tttgaacaag
    10561 gcggcctttt gaccgaagcc gtcaacaaac agccgcattg cgtgttgctc ttggacgaaa
    10621 tcgaaaaagc ccaccccgac attttcaacg tcctcctgca agtcatggac gcaggcaaac
    10681 tgaccgacaa caacggcaag agtgccgatt tccgcaacgt catcctaatc atgaccacca
    10741 acgcgggcgc ggaaagcctc agccgccctg gcctcggctt taccgccaag cgcgaacacg
    10801 gcgacgaaat gcaggcaatc aacaagctct tcacgcccga gttccgcaac cgcttggacg
    10861 cgattatccc atttgcaccc ttgtccgaac ccatcatcgt caaagtcgtg gacaaattcc
    10921 tgctccagct cgaacaccag cttctcgaca aaaaagtcga agccgaattc acgcccgcat
    10981 tgcacaaata tctggcggaa aaaggtttcg acccgcaaat gggcgcgcgc ccgatgcacc
    11041 gtctgattca ggaaaaaatc cgcaaaccgc tcgccgacga actcctgttc ggcaaactat
    11101 ccgacggcgg cttcgtgcgg atagactggg atgcggcaaa agaagaagcc gtgttgaagt
    11161 ttaagaaaag caaggtcaaa ataaaaaccg ccctcgcatg aaatcaaaaa tgccgtctga
    11221 aagattcaga cggcattttt ttaaatatct gtccctattc cggcaaactt ctccacaaac
    11281 gccgcgattt tttggaagac actttgtttc ttcgtcagat attgcggatt gagcggactc
    11341 attttcggca gggtttcggt cagttccgtg ccgttttcgc tggcatagcc gcgtttgagc
    11401 gagctgatta aatagcgttt agcggcggtt tcgttcaggg cttcggcggc aatcaatcct
    11461 gccgcttcgt gccgcatcac ctcttgcgcg taggtgtaaa aggtttccag tatggcggga
    11521 acgtcgggca ctttgtccaa atccgtatcg ttgatgaaat ccacaatcag accctctttg
    11581 gcgcggtgtc cgatacttgc gcggatgatg cggcggattt cttccaccag ctccgctttg
    11641 cctttgattt ttttgtggtg ttcgaaaacc agttgcaaaa tgtaatccaa attgatttcc
    11701 tgcgatttga gcaaatccac ctcaaaaacc acatcgtccc aatcgatttt cgattgctct
    11761 ttctgttcgc ctgctttttg gcggcgcaac caatcgcgga tgtcgttgta ggcggaacgg
    11821 tagtcctgca ccgccctttc agacggcatc ggcacttgcc gcatttcctg cacgtcttca
    11881 tcgctcaagt agtatttttc ttgaaacgcc ttcatcgcat cttcgtccgc cgcgtccaca
    11941 ctctgcaact cgcgcagcgc ggcaaattca tcgtagttct gcaatacgtt ttccgcccgc
    12001 aggtattcgc cgaagagttt ggcaaaatct tttttgtctt tttccgtttc gattttgtcg
    12061 ggatcgggga aacgctcgcg caattctttt gccacatcca aataaccgcg ccgcacttcg
    12121 cccgtccgat catcgatata gccgttcatg tattcttcgt agcttttttc caacaccacg
    12181 tttttggtgt ttttatcgcc gaacagggta atcgcatcaa tggttgcctg ctccaaatcg
    12241 cggaagcaga caatattgcc gaaggttttg gtggcatcgt aaatgcggtt ggtgcgcgaa
    12301 aacgcctgca tcaggccgtg atagcgcagg tttttatcga caaacagcgt gttcagcgtc
    12361 ggcgcgtcaa aacccgtcaa aaacataccg accacaatca gcaaatccac ttcctggttt
    12421 ttcacccgtt ttgccaaatc gcggtagtag ttctgaaagg ctttgctgtc cgtgccgaaa
    12481 ttggttttga aacaggcgtt gtaatcgttg atggcagcct gcaaaaattc tttcgcgctg
    12541 ctgtccatcg cttccggttc aaaggtctca tcaacaattt caccgacggc gttctgctct
    12601 tcgttggccg caaaggaaaa aatggtggcc actttcagcg ggtgcaggct gcctgcctgt
    12661 tgtgttttga acgcttcgta atagcacttc gccgcatcca cgctgctgac ggcaaacatc
    12721 gcgttaaagc ctttgccacc cgcattcagc cggtgcgttt tctgcctgaa ctggttcagg
    12781 atatattgcg tgatttcgcg gatgcgttcg gggtgcagca gggcttggcg gttttcggca
    12841 gcactcagtt tcttctcatc ctgttccgct tccacggctt tgaactgcgg gcgcacatcg
    12901 ttgtaatcca ctttgaattt caatactttt tcatcgcgga tggcatcggt aatcacataa
    12961 gaatgcaact cacgcccgaa cacgcccgcc gtggtttccg cgcccaaagc gttttcggga
    13021 aaaatcggcg taccggtaaa gccgaactgg cagaattttt taaatttctt tttcagattt
    13081 ttttgcgctt cgccgaattg cgagcggtgg cattcgtcga aaataaagac aacctgctgg
    13141 tgataaaccg gcagattatc ttcactcttc atcaggttgt tcagcttttg gatggtggta
    13201 acgatgattt tgttgtcgtc tttttccaaa ttgcgtttca aacccgccgt gctttccgaa
    13261 ccgttcacgc tgtcggtcga aaaacgttgg tattccttca tcgtctgata gtccaaatcc
    13321 ttcctgtcca ccacgaagaa aaccttgtcg ataaatgccg attccgtcgc cagacgcgcc
    13381 gccttaaagc tggtcagcgt tttgccgctg cccgtggtgt gccaaacata gccgccgctt
    13441 tccggcttgc tccaattctt cgcctgcgcc gaactgttga ttttccacaa aatgcgttcg
    13501 gcggcggcaa tctggtacgg ccgcataatc agcagcgtat cattcgcatc gaacacgctg
    13561 taatgcagca aaacgctcag taatacgctt ttttgcagga acgtggcggt aaagtctttc
    13621 aaatccttaa tcggatgatt gtccgaccgc gcccaattca tcgtgaaatc gaagctgttt
    13681 ttgtcgcgct tggtggtgtt ggcgaaatag cgcgtgtccg tgccgttgga aatcacgaag
    13741 atttgcagga atttgaacag cgaattttcg ctgttgaagc tctctttgct gtaacggtgc
    13801 acctgattga atgcctcgcg caccgccaca ccgcgctttt tcaattcaat ctgcaccagc
    13861 ggcaggccgt ttaccaacac ggtaacgtca tagcggtttg catgcgtgcc cgtctgctca
    13921 aactggttga taagctgcac atggttgcgg gcaaggtttt tcttgtccag cagataaatg
    13981 tttttcagac ggccgtcatc aaaagcgaaa tcgtaaatat ggtcgtcgtg gattttgcgg
    14041 gttttatcgg taatattttc agacggtctg tccagatatt ccgtcaaaaa ccgcgcccat
    14101 tcgccgtctg aaaacgccac atcgttcagc cgctgcaact gcgcgcgcag gttttccagc
    14161 agcctgcttt ggctgttcaa atccttgcgg tattcgtaac cctgattctg caaatcggcg
    14221 attaactccg cttccaaccg gttttccgat tggtagctgc ccgactgttc gattttttca
    14281 tattggtcga gcacgatgaa attcggcgtt tcggcgatgg gtttggtttc gaggctcatg
    14341 gattatctct ttgttcatta ctttgaaaaa aattatagtt atccagcaag tgtttcagaa
    14401 gtaatttgat agtttcttgt tcttgccgtg ttggttcaat aaattcctca tttgataatg
    14461 tagaatgact tgtgaagtta ataatacgtt gaaaatagtt ttgtctacca tcttcaggca
    14521 gaagattaga ccattcttca taacctaaaa aattagctgt tttctcatac aggtttctta
    14581 gtaaaataaa atgaaatctc tctacttgtt gattttgtat agctttttca ataactcctt
    14641 ttaagtgaag gtgatatgaa aaacttttat tggaatcccc acgtttttca agaatatcaa
    14701 aactaccatc ttcatttttt aacaaaagat aacttccatt tttatttttc aactttagtt
    14761 cattgtatag aacgttgtaa aataaaacat tatgtgtggt aataataaac tttaactctg
    14821 attcgctact ttttatcaaa tcagccaaat caaccgcttg ctgaatcaga tgattttcat
    14881 ccaaagagct gacagggtca tcaataaaaa tatattccaa atcgtcaaac tgatctgtgg
    14941 aacgtccttc ttcgctatct tctggaatat tcaattcagc gatgacttgt ctgattaata
    15001 catagaaaat gctccaaata aaattacttt cttcaccttt ggaaattttg atattttcaa
    15061 tctgctcatc attaccacga gcaaaataaa atacaatttc tgaaaaatta tcattaaaat
    15121 caggagtcaa cttatcatct gtataatatt gaaagttttt aataacagct ccatccagtc
    15181 cattatccct aagcaaccag tcggtaaaac tattcttttg aatttttaat cttggagctt
    15241 cgttcgctaa caaatcattg tcccaaaaga ataaatcctc agtaaatgca ttatagtaga
    15301 gaaattttct tcttgttggc tctccgtctg ccccttctga actggttgga gcaattaaat
    15361 tcttaaactc tccggataaa cgcgttttcc ctgttccgtt aaaggcatag ataagctgaa
    15421 cctttttatt gcttcctttc aattgttcag caatctcagt taaacttctt cccattatat
    15481 ttccttatca atattttcag atgacattat cccaatttca ggctgccttg gggaaggcaa
    15541 gcagctgttc acggtaatat tcgtattgtt ttcggcgcag ggtgatttcg tacggcaggc
    15601 cttcgctgat ggagtgggtc agggtgtcga atttgtcgag gatggcgacg attttttcct
    15661 gttcggggag tgaggggatg gggattttaa attctttaac ctttgcatct gatattgctg
    15721 gataagctga gccactttga tttacttcaa catattgatt aaacctttct gttgagattt
    15781 gataataaat ccactttggc aatacctctt tgcaatttgc tcttaataca caatatcccg
    15841 tgcttgcaat ttcaccagaa aatttcttac taattattgt aaaacgttgt agcgttggcc
    15901 gagtagttgc aaaaatcaca tcatgttctt ttacaatttt ttgagctcta cttggcgcat
    15961 tatttgctga tattgcaata gtatcagtaa tggttttata ttcccgacta actgaagtca
    16021 aatcaatata ttggtaaatt ttatctgtat atttccattt aatattttca gtaggtaagg
    16081 ttacctcccc caacgtcttc caaaccacat ctttcagacg gcattgatag ccatcagctc
    16141 cccccccgat ttgattgtca aaatctaaaa gaaagtcacg gtaatactgg tattggcgtt
    16201 tgcgcagggc taattctgct tccagcgtag cttccagctc agtgaatttg tcaagtattt
    16261 ttacaatttt ttgttgggtt tctaggggtg ggatggggat tggaaatctt tgcaacattg
    16321 gttttcgaat agatgtagct gttgccccca cactctttgc ttgaatatac cttttaaaat
    16381 ctacattcat gaagtaataa agaaatttag gggataaatc aggtattaca acatgaactc
    16441 tatatgctct ttgatgtaag gcgtatttac cttccgcata gtggaatata tctccaattc
    16501 caccttctcc gggaataata atagcagtct cattgaattg atatgttgat gatctaagaa
    16561 tatttttaga tcgaacataa aatggatact ctccatcatg ctcttcatcc tgcctattgg
    16621 aacttcctgt accaatctca gccacctccc ccaacggctt ccactccact ggtgccgtct
    16681 gaatcatctc aatcaatttt ttcgctttgc tttgcatatc catggttgtt ttccgtttct
    16741 ttccctctgc ggcgggatgc ggggcggttg tggggtgctt cggctcactc tgtccgtttg
    16801 ccgttatttc tgcgggctga agtccgtcct gctttcaggc tgcctgcaat ggtgtgcagg
    16861 ctgctttttc aggtagcctg aatggtagtt attttgtgcg gtcttttttc tgtttgatct
    16921 gttgcacggc tgttttttcc aacgctttaa cgctttccag ataggcttgc tccaccggcg
    16981 acaggatgcg cgcttcatag gcgcggtatt cgcgttcggc tttctgctct gcctgtttgc
    17041 ggctgatgct gcctgcaccc tgtaatgtgc cttgtccgta cagcccggaa aatttgtcca
    17101 attcggctat ccagtcgcgc atatacatgg ggctttgctc ctgcgctttg atttccgcta
    17161 ggtcgaagaa ggcggaaacc agacggttca ggcggaacag ttcgtcttcg gtcagatagt
    17221 ttttggcgat tttggcttca ttcagcgtgg ggattgcgcc ttgaaaggtg gtcagcccca
    17281 taaagtcttt gctgctgtcg gcacggctgt atatcagctc agctgcggtt tgccggctgg
    17341 cggcatagtg cagtttgttt tgaacggcgg caaaaaaggt ttggctttcg ctgcttttgg
    17401 ggttgtagtc ttggctggtg gcatataaat caagcacttg ccggtatagg gctttttcgc
    17461 tgctgcggat gtcgcgaatg cggttgagca gttctttcca atagtcgccg ccgcctgtgc
    17521 ctttcaggcg ttcgtcgtct atggcaaagc ctttggtcag atattcgtcc agccgttcgg
    17581 ttgcccattg gcggaattgg atgccccgcg cggaacggac gcggtagccg acggcaataa
    17641 tcatgggcag ggaataatgg gcgattttgc ggtttacctt gcgcccgttt tcattttgaa
    17701 ctgtcaactg gaagttgaca gttgccttct cttccaattc ttgctctgca agaatggttt
    17761 taatgtgttt gctgatattt tgtttggtgg tttggtacag ttctgccatg tccgcctgcg
    17821 tcagccaaag ctgtccgcca aattcctgca aggcaaattg ggcagtgccg tcgttggcgg
    17881 tgtataggat gatgctcatg cttcaatctc tgcaatcact tcgtcaattt cacgccgcag
    17941 ccgttcgatt ttggcaacgg tttcgctgat ttcggcgtta agctgtttga tgtcgataat
    18001 ttcgcgggtg tcttcgggtt caacatagct gctgacggcg aggttgtagc cgttgtcttt
    18061 gacggtttgc tgggcggcgt tttgggcgat atgcggcaca tcggctttgt cggcgaagag
    18121 tttgacgatt tcggcaatgt gttcttcggt taagacgttg ttgttggttt cttttttaaa
    18181 gaagccgcct gcgtcgataa attggatgtc ggtattgtct ttgtgtttgg acaaaaccag
    18241 gatattgacg gcgatgccgg tgccgtaaaa gagattgggc gcaagggcaa tcacggtttc
    18301 cacgtagttg ccctccacca gatattggcg gattttctgc tctgcgccgc cgcgataaaa
    18361 aatgccgggg aaagagacga tggcggcgcg gcctctgccg gaaaggtagt tcagtgcgtg
    18421 caggatgaag gcaaaatcgg ctttggattt cggggcgagt acgcctgcgg gggcaaagcg
    18481 gtcgtcgttg attaaggtgg ggtcgtcgct gcctatccag ttaatggaat aaggcggatt
    18541 ggaaacgacg gcatcaaagg gtttgctgtc tttgagcttg ggcttggtca gcgtgtcgcc
    18601 caattcgatg tggaatttgt tgtaattgac gttgtgcaga aacatgttca ttcgggcgag
    18661 gttgtaggtg gtgtggttga tttcctgccc gaagaagcct tcttcgatga tgtgctcgtc
    18721 aaactgtttt ttcgcctgta agagcaggct gcccgagccg caggcgggat cgtaaatttt
    18781 atttaccttt tcctgcccgt gcaccgccag ccgcgcaatc agcttggata cgctttgcgg
    18841 ggtgaaaaat tcgccgccgg atttgcctgc gttggcagcg tagttggaaa tcaggtattc
    18901 gtaggcatcg ccgaaaaggt cgatgtggtg gtcttcaaaa ctgccgaaat cgagttccgc
    18961 cacgcctttt aggacggcgg caaggcgttt gttcttgtcg gcaacggtgc tgccgagccg
    19021 gctgctggtg gtgtcgaagt cgtcaaacag gcctttaatg tcttgttcgg acggatagcc
    19081 ggaggcggag ctttcaatcg cggtaaaaat ttctttcagc ttggtgttga gctcttcgtt
    19141 ttgatgggct tcggcggcaa tattgcaaaa aagctggccg gggtagatga aatagccttt
    19201 gactttgacg gcatcgtctt tgatttcggg cgtgatgatg ctgtccggca tagcggcgta
    19261 atcaatactg ctgtcgcctg cctgcatata gtcggtaaag ttttcgctga taaagcggta
    19321 gaaaagtgtg ccgagaacgt attgtttaaa gtcccagccg tccaccgcgc cgcgtacttc
    19381 gtcggcaatt ttccaaattt ggcggtgcag ttgggcgcgt tgttgcattt cggtcatcat
    19441 cgaaatccat ataaaagtta aacaaatcga aatcgcctga tattttcaga cgatttttta
    19501 cgggcattca aattaagcca aattttccag catccatttg acgtagcgct cgacgcctga
    19561 tttgacatcg aaaaattctt ccgtataacc tgcctcacgc aatttggtga tgtcggcttg
    19621 agtgaagctt tggtatttgc ctttgagcgc atcgggaaat gggatgtagc ggataagttc
    19681 ttcttctacc agctctttca agctcatttc gggtttgcct tcggcggcgc ggcaggcgtt
    19741 gacggtggcg gcggcgagtt cgttgaactg ttggctgcgg ccggtgccga ggttgtagat
    19801 gccggaaagt tcgggatggt cgaagaagta gaggttgact ttggcaacgt cttcgacgct
    19861 gacaaagtcg cgggtttgtt cgccgttgcc gtagccgtcg ttgctgccga acaggttgac
    19921 gtaaccgtgt tcgcggtatt ggtggaaatg gtggaaggcg acggatgcca tacggccttt
    19981 gtgttgttcg tgttgtccgt acacgttgaa gtagcggaag ccgacgactt gggcggtcaa
    20041 gccttctttc atgcggcggc gcaatacttg gtcaaacagg aatttggaat agccgtacac
    20101 attgagcggt ttttcgagtt cgcgctcttc acggaagatt tcgcctttac catacacggc
    20161 ggcactggag gcataaagga agggaatgcg ttcgtcctga caccagtcca acaaatccag
    20221 cgtgtactgg tagttgtttt ccatcatata caaaccgtcg tgattcatgg tgtcggaaca
    20281 cgcgccttga tggaaaacgg cttcgatgtt ttgataaggt aaaatgtgtt ccctcacttg
    20341 gcggatgaat tcatgtttgt cgagataatg ggcgatttcg cactcggcaa ggtttttgaa
    20401 tttttcgcct ttgctcaaat tatcgacggc aacaatgtca gtaataccgc gttgattaag
    20461 tgctttgacg atgttgctgc cgataaagcc ggccgcgcct gttacgatga tggtcatatt
    20521 cggtttcctt tgttttgagt aaaattaata aacttagtta caagaaatca tcgatattgt
    20581 cctgaaacac aaatttgcga tgatattcca aatatttttc tcttccttcg ggatatattc
    20641 tcatcttaat tttttgcatt tggattgata ttaagttttt cccatgtgta acggcttagt
    20701 cgagtaccgc aaatcaaacg accatcatcc aagaaagtaa tataaccttg atcgaacaac
    20761 caatcataag tcggcgttaa agctaaccca tttaaataat ctaatgcctc tttctcattt
    20821 ttctcagtaa tacaaaccat ataaggttta atatgactag cccttaacaa aatctcatct
    20881 gtaattaatg taaatggaca ttgcggcata tgatttataa catccttgcg atatttctgc
    20941 tgcccttttc tacttttctg tttaatgatt tcttgctcta cgaattgatt aaattctgaa
    21001 gccggtattt ctaatttttc tcttgataag agttgcgggt gcacgataga gcgaaattga
    21061 taatccaaaa atattcggaa ataaaataat ggttctgaat cttctatatc tttgacaggc
    21121 aatagtttaa gaattgataa ataactaatt ttgggcaata caatcttacg ccaaattgac
    21181 catatatcat cctccgaacg gatataaccc ctacggtaac ctttagaatt ttccaaatgg
    21241 tctgatacat catggattga aaagaaaata ttttctgtag gcagattatt aatacttaaa
    21301 acgtaatcat cataaaacct tgaaatatca tgatgatatt tctgttcttg tttgtgatat
    21361 tcaacttttg catcaaccaa ataacgctgt aaatttttct tattaaaaaa acaatttttc
    21421 tgaatgaaag gatattctac cctccttcca ttttttgtct cagtaatccc ccaattttca
    21481 tactcaaaaa atgtacttag ttttcgacca ctatcatcaa tataactacc tacatatttg
    21541 cgtgcttccc cattaccacc aaaaacagat aacttgttat tcctgtgaat aaaactatct
    21601 tccgcacgta aattttgaat actatcgaca ataaaatact ctatgttttc aatagtaatt
    21661 ctttgaaaat ccggcatttt actctccata aagcgtaata tccatttgtt ttaatatagc
    21721 gattaataca tcaacaacaa tactgtttcc cgcttggcga tacatttgag tatcactaac
    21781 taaaatttta aaatcatctc taaaacccat tagccgcaaa cattccctag gtgttaattt
    21841 acgaatacgt ccacgattat gagtaacata attatcaacc ccggcacgat gcattttatg
    21901 catagtttgc aataatgggc gagctacagg caaatcagtt tccgtactgg ttttaaaatt
    21961 ttttgttcct cctgccaaaa cataattttt gattttttca gaaagataat atttttcctc
    22021 aacgttattt acatcaaaaa taaagtcatc aaattcagat tcgcgggctg cctgaaaaat
    22081 aaaatcacca tgccaattaa attgttgatt tgctttttgg cataaggcaa tttctccatt
    22141 aatctgtgta taacgttttt gtctattttt agaactggta acaaatttca cacccttttc
    22201 acgtaaaaaa tatttgctat cagtatagtc ctccaaaaaa tcttgcatag tatgttctaa
    22261 ttcaatcttt tcaggaaact gaaaaccatt tataggaggg gtatgaaagc caacaacaaa
    22321 aatacgctca cgatgttgag gaatcccata atccttacta ttcattattt ggaaatataa
    22381 gtcataacca agtgaataaa aaacactttt tacaactttc caagtttttc cattatcatg
    22441 attaagcaag ccctttacat tttcataaat aaatatcttt ggttggactt catccacaac
    22501 gcgagcaaat tcatagaata atgttcctcg tgtatcttct aatcctgcac gtttgccaac
    22561 catggaaaat gcttggcaag gactgcctcc aactaaaata tcaacttgat ttctaaactt
    22621 tctcgcatca aattgagtaa tgtcgttatg ccaaaaatct tcatttaatt tatagtttcc
    22681 aagataactt tttttaacgt atggatcaat atctcctgaa aaaacaatgg tatggtttaa
    22741 atttaatcgg tggaatgcct gttcaaccgc accaatcccg ctgaatacgg ttgctaatct
    22801 aatatgtgaa tcaggtttaa gaaaagtttt agatttccaa ccttgttgac tgggaaagag
    22861 caaagttttt tgtaatcgag tatcgtgtgt ctgtgccatt gtcgaaatag tcatacttat
    22921 atcgttctgt ttatcttatc aatatgaaaa ctacattgtt gattgccctg acaatgcctt
    22981 gatcaattcg gcaaacgagc aaaccgccgt accgagtttc gccacgacaa ccccggccgc
    23041 agtattggca aggtacatgg cttcgggcat ggtgcagcct gccgccaaac ccaagcccat
    23101 tccggcaatg acggtgtcgc ccgcaccgga tacgtcgtaa acttcttggg cgcgggtggg
    23161 ctggtaaatc ggttcgcctt cgctgaacaa ggtcatgcct tcttcgcttc gggtcagtaa
    23221 aacggcggtc aggtcgaggt ggcggcgcag gttttgcgct ttttcggtca gctcgctttc
    23281 gtttttccaa ctgccgacca cttctttcaa ttcggcgcgg ttaggcgtaa tcagagttgc
    23341 accgacatat ttttcgtaat cgtcgccttt ggggtcgatt aagacggttt tgccggcgtg
    23401 tttcgcccaa tcgatcatat cggagatatg cgacaggccg cctttgccgt agtctgaaaa
    23461 aatgattgcg tcgtattcgg gcaagatttc gcggtatttc tgcttgattt gttccaacac
    23521 ttcgcagttg ggatgttctt caaaatcaag acggataagc tgctggttgc gggcgacgac
    23581 gcgcagtttg acggtggtgg cgatttgttt gtcgcgcatc agataggagg cgacgccgtc
    23641 ctgcaccatc agcgcatcga gcgcgtcggc ggcttcgtcg ttgccggtta cggacaacag
    23701 ccctgccctg ccgcccaacg aagcgatgtt gcgcgcgaca tttgccgctc cgcccgcgcg
    23761 ttggtcgatt cgtccgattt tcgccaccgg cacgggggct tcgggcgaaa tacgggacac
    23821 atcgccgaac caatagcggt cgagcatcac gtcgccgaca accaggactt tggcttgcgc
    23881 gaaacgggat ttgagggttt cttgttggaa cttggcggac atattgcctc cgttgtattt
    23941 tttcagacgg cctcagcctg taaggccgtc tgaaaatcag tttgcttcaa ggtttgccac
    24001 gcggttcact tcgcgcaata cggctaccgg atcggcagct tgggttacag gacgacccat
    24061 taccaaataa gtcgaaccgg cagccaaggc ttcggccggt gtcatgatgc ggcgctggtc
    24121 atcattattg ccggcaacgt ccaagcggat gccgggcgtg accaagacaa aatcctgtcc
    24181 caattcgcgg cgcagcggcg cggcttcttg ggcggaacag accacgccgt ccaagcccga
    24241 actttgcgcc agttttgcca agcggatgac ttgttcttca ggggcggtgt tcaaaccgat
    24301 ttccgccaaa tcgctttgtt ccatgctggt caacacggtt acgccgatta agagcggctt
    24361 cgtgccgtat ccggcaacgg cttctgctgc ggcttccatc atacggcggc cgcccgatgc
    24421 gtgcatatcg accatccaaa cgcccatatc ggcagcgact ttgcaggctt gcgcgacggt
    24481 gtggggaata tcgtggtatt tcaaatcgag gaaaagtttg aaaccttgat tgattaagct
    24541 ttctgccaaa ttgcgtcccg tcgcggtaaa cagctctttg ccgattttga tttgacacaa
    24601 tgtcgggtca aggttgcgga cgaatccgag cgtgtctttt tcgttggaaa aatcaagggc
    24661 gacgatgacg ggggtgcgtt gttgcggagt ttggaagtcg gagattaaag gattcatggt
    24721 gttttcgttt cgggttttca gacgaccttt atcgtctttt tcgcagtata gtggattaac
    24781 tttaaaccgg tacggcgttg tctcgcctta gttcaaagag aacgcttctc taaggtgctg
    24841 aagcacaaag tgaatcggtt ccgtactatc tgtactgcct gcggcttcgt cgccttgtcc
    24901 tgatttttgt taatccacta taacaacgta aattcaaacc gtaggtcggg cattgatgtc
    24961 cgacctacgc ggactcaagc ccccgacaaa ctgtttcgga taaatttgaa ccggtacatc
    25021 agccgtcatt cccgcgcagg cgggaatcca ttgataaaac tcagttcatc agatttaaac
    25081 agcgattgcc caaattcaga aatggattcc cgcctgcgcg ggaatgacgc caaatgatta
    25141 tttttcggtt gcaacacgct gtttatcaaa aacaggtcgt ctgaaaacct gattttctgt
    25201 tttcagagtg cgaagcctgc ccgtgggtac gaccttttcg atttatttgc ccaatgcgcc
    25261 caatacttcg gctttcacgg cttctaccgg ctgagtgccg tcaactttga tgtatttagg
    25321 cgcgtgttcg ccttccagtt tgctgtaaaa atcaaccaaa acttcggttt gctcgtggta
    25381 aacggcaagg cgttttttca cggtttcttc tttgtcgtcg tcgcgctgaa tcaaatcttc
    25441 tccggttacg tcgtctttgc cttcaacttt gggcgggttg taggtaacgt ggtaagtacg
    25501 gccggaagcc aaatgcacgc ggcggccgct catgcggtcg acaatcacgc tgtcaggcac
    25561 gtcgatttca acgactgcat ccaaatccac gcctgcttca accatcgctt cggcctgtgc
    25621 cagcgtgcgc gggaaaccgt cgaacaggaa accgtttttg cagtcgtctt gcgcgatgcg
    25681 ttctttgacc atgccgataa tgatgtcgtc gcgcaccaag ccgccttcgt caatgatttt
    25741 tttcgcttcc aaacccaagg gcgtgccagc cttaatcgcg gcgcggagca tgtcgccggt
    25801 agagatttgc ggaatgccga acgcggcggt gatgaattgc gcctgagtgc ctttgcccgc
    25861 gcccggcgcg cctaaaagta atgctttcat gaagtgatcc tttgaaatgt gtttattgga
    25921 atcaaacaga tggtttacga ttctacacgg cttggcacaa tagttcaaaa accaactgca
    25981 caaactgcca tttgcaagca aatgttttgc atacctttgc cgagtctgat attcacaagc
    26041 cggcaacttt ttgggacaat ccccaaaatt tcaaaacatc acaccctacc aaaaaggaac
    26101 atccgtgaaa cgaatttttc tgtttttggc taccaatatc gctgttttgg tcgtaatcaa
    26161 cattgttttg gcggttttgg gcatcaacag ccggggcggc acgggcagcc tgttggcgta
    26221 ttccgccgtc gtcggcttca ctggttcgat tatttcgctg ctgatgtcca aattcatcgc
    26281 caaacaatcg gtcggcgcgg aagttatcga cacgccgcgc accgaagaag aagcctggct
    26341 tttgaacact gtcgaagccc aagcgcggca atggaacctg aaaacgcccg aagtcgccat
    26401 ctaccactcc cccgaaccca atgcctttgc cacgggcgca tcgagaaaca gctccctgat
    26461 cgccgtcagc accggtttgc tcgaccatat gacgcgtgac gaagtggaag ccgtattggc
    26521 gcacgaaatg gcacacgtcg gcaacggcga tatggttacg ctgacgctga ttcaaggcgt
    26581 ggtcaatacc tttgtcgtgt tcctgtcgcg cattattgcc aacctgattg cccgaaacaa
    26641 cgacggcagc cagtcccagg gaacttattt cctggtcagc atggtattcc aaatcctgtt
    26701 cggcttcctt gccagcttaa ttgtcatgtg gttcagccga caacgcgaat accgcgccga
    26761 cgcgggcgcg gcaaaactgg tcggcgcgcc gaaaatgatt tccgccctgc aaaggcttaa
    26821 aggcaacccg gtcgatttgc ccgaagaaat gaacgcaatg ggcatcgccg gagatacgcg
    26881 cgactccctg ctcagcaccc acccttcgct ggacaaccga atcgcccgcc tcaaatcgct
    26941 ctgagccgat ttgaaacaac aaaaaaaccg tacgcgcaag cagtacggtt ttttgtatat
    27001 gctgtctgaa aacatcaggt ttccataccg acaccaaccg tatccatttc cgcaccggat
    27061 acgccgcatt gatataccct gataaaccgt atccggacag aaaatatagt ggattaacaa
    27121 aaaccagtac ggcgttgcct cgccttagct caaagaaaac gattctctaa ggtgctgaag
    27181 caccaagtga atcggttccg tactatttat actgtctgcg gcttcgtcgc cttgtcctga
    27241 tttttgttaa tcccctatat cagataaaac agcggtaaaa ttgccgtctg aaaccaactc
    27301 tgcgccatac gggacacgct ctgcacgtct atttgcctcc gatatatcct ccctactgta
    27361 ggaacgtctg ccgatttgca cgaaatcggc acctctagca cccttcagga tggcggacgt
    27421 tatccgttct tgggattctg caagacggtc gacggcatta tacagacgct cggtctgata
    27481 cccttccgaa gcaacctgct tcaggtattc caaataaccg taacccaacg cccctccgac
    27541 aagcagggtc gtcaacgcta ccagcgttgc cgaacggatt ttagggggca tatcttgaag
    27601 catatctcta ccgaaccgaa ccaaagtctc tttaaagtcg gactctacac gcgtagaacc
    27661 ctcggaaatc ttgaagttca actcatactg cttccgtttg tccgctgtca accgcttgag
    27721 gttgtcatcc ccgtattgga cggttgacac aaccctgtac agactgtcct gtatttcgac
    27781 cagcgtctgt gcaaagttgg cggtcataac tggattccca acccttgccg ccgattctga
    27841 tactcaaaac ggtatccagg cgttccagca gggcttcggg agacagcagt gcgtattctt
    27901 caatattttc cataggttga ttatagcaga accttatacc tgttacagac aaggttgtcg
    27961 ggatttgaac gtccgtcgag cttggttcgt atagagccgt agggggtgtt tagggctttg
    28021 gcggcagctt gtacgctggg gaacgtgagt gtttcgcctg tggcggtgtc gaggatggag
    28081 acaggttttt ggttttgggg aggcgtattt tccttcattt taagtttccc gcactccgga
    28141 cacccatact ttgactttat agctgtgtcg taatacaaaa gttggacaac cccgtgcgta
    28201 ggacatctaa cactggaagg tttataaatg ccactgaact ccaacaattc taaatgtgga
    28261 aatttctctt gaaagcgtga tttggcggta tcgaaagtca ttcgcttacc cataatttgt
    28321 ctccataggt tatgtgcaaa tggattacac aaccaaaata tagaaatttt caaatttttt
    28381 gagacctacc tgaaatcctg cgcaagcaca atgtaaagaa aaatggtata cgtctttact
    28441 aaatctttac ataaattaac tctaaccggg atttgaacgt ccgtcgagct tggttcgtag
    28501 gatttagggt gttgtgaacc ttacctatcg tacccaagca ctttgtacct gtttgaaata
    28561 aggttgtcgg gcgacgttcg acccttgagc ctgtgattga tttgttggaa atgtacacct
    28621 aaagcagcac ctgcggcagt aacgcttggg aacgtgagtg tttcgttggt cgttgtgtcg
    28681 aggatgagga ggggcttccc tacatttgga ggtgtttggg tttttgacat cttagcacac
    28741 tcaggacacc cgtactttga ctttataagg gcattaaatg tcgaataacg aacgttcccg
    28801 tgcataggac aattaacggt tactgggtaa ttcacaccgt caaagtcggt tagagagata
    28861 ttagggaata tatcagtaag ttcagaagct gcttggttga aagatttggc catttgagac
    28921 tccaaaattg attgtcaaat ggatttaata gcaaatttat aaaaatgtca aatttttcga
    28981 gaagcacctg atagtggcga ggggtataca ctgttaaaaa gtgtatacgt catttagtgc
    29041 agatgtgaac cttatacctc cctgcaagta aagtctctgt gtgaacccga ccttttatac
    29101 ggtcagtgat agctgctggg tttataccca atgaccttgc agcagatgct cttgagggga
    29161 atgtaagtgt ttcgccagtt acagtatcct ccaatactgt atttttagat aatttatcta
    29221 ttgtatcttc tggaattttg tgggaattga caccataaga tgcacatttt ggacacccac
    29281 ttttagagtc caacatactt ttgaatgtag agcaagtaac cctcccgtgt ataggacaga
    29341 cgattaccgt cgggtaacga acgccattga actccacaag attcaaatgt ggaaatttag
    29401 aggttagctt agaaactgct tgagtaaatg taagtgccat agtggttgtg aacttacttt
    29461 accaacctat aacgatacct aatcaatcgg tcaaacggag tgcgtccgct taaacgtaca
    29521 gctaaagtgc tgttggagca accgataaat ttactggcag ccagtgtact tgcaaactcg
    29581 tagatttccc ctgtctctgt gtcctccaac ctaatggcaa cggcgtttgg agagggcttt
    29641 tcgggatttc gagtacattc aggacatcct gttgaggatt tcatggcagc ttgtagattc
    29701 ccgtaaacaa ccgacccatg caaagggcat tggattgtta ccggttcgta gtttttagtg
    29761 aacttcaaaa ccgtcttatc aggaaattta ctggaaaacc ttaactgaac atcttgtagc
    29821 gagagtgatt ttggcattat agacctttct aaaatgaaag cattatacaa ccaaaatata
    29881 gaaattttca aattttctct gaacgcactg gtatccgatg gagctaaatg taaagaaaaa
    29941 tggtatacgt ctttactaaa tctttacaca ttttaactgt atagtgtttg acaaacaaca
    30001 ggcataggcg cataatgcac ccgtagttag atagatagta aggagataac caatgactta
    30061 gcacctgccc ccctctctct cgcgcacccc gcccctcgct tgcggctaat gggctttgcg
    30121 cgacatatac actttcatct cctgcatggc ttaactgcct atgcaatagt acacacatca
    30181 acaaatcagg ctggcacgtc ttggcattgg ctgacgtacc attgtagccc gaaatgttga
    30241 taccctacta tttatgacca acggcggatt agggcttcag acggcaattt tactgcaaaa
    30301 ccttatgcga acggatgatg cagcacaatc gtttcttcgc ggtcggggcc ggtggagacg
    30361 atggcgaccg gcgcaccgca gacttcttca atccgtttca aatatgcttt ggcattggca
    30421 ggtaatgcgt cgtagctttt cacgccgaaa gtggattcac gccagccggg catggtttcg
    30481 taaatcggct tgcaggtttc caccgcatcg gaaccgcaag gcaggatgtc ggttttgccg
    30541 ccgtcgggca attcatagcc gacgcagata ttgatggttt caacgccgtc cattacatcg
    30601 agtttagtaa tacacatacc ggaaatgccg ttgatttgga tggagcgttt caatgcggcg
    30661 gcatcaaacc agccgcagcg gcgtgcgcgt ccggttaccg aaccgaattc gtgtccgcgt
    30721 tctgccaaac ctgcgccgac ttcgtcgaac aattcggtcg ggaacgggcc cgaaccgacg
    30781 cgcgtggtat aggctttgac gatgcccaaa acataatcca gcatttgagg acctacgccc
    30841 gcgcctgcgg aagcggctcc cgccagacag ttggacgagg taacgaaggg ataagtgccg
    30901 tagtcgatgt ccaacaacgc accttgcgcg ccttcaaaca gcagtttttc gccgtttttg
    30961 tttttctcgt tcaacacgcg ggacacgtcg gtaatcatcg gcgcaatgcg cggcgcgact
    31021 ttttcgataa ccgccatcac gtcttccgct ttaaccggct cggcattgtg cagatgttgc
    31081 agttggacat tgtaataggc aaggacggca tccagttttt cacgcagttt ttcaggatgc
    31141 agcaaatcgg cggcgcgaat ggcgcggcgt gccactttgt cttcgtaggc agggccgatg
    31201 ccgcggccgg tcgtgccgat tttgcctttg ccgcgcgatg cttcgcgggc ttggtcgagc
    31261 gcgatgtggt aaggcaggat cagcgggcag gtcggcgcga ttttcagacg gccttcgacg
    31321 tttttcacgc ctgccgcgtt caactcgtcg atttcgccca acagggcttc gggggagacg
    31381 acaacgcccg aaccgatgaa gcagtccaaa ctttcatgca ggatgccgct cggaatcagg
    31441 cgcaaaatgg tttttttgcc gccgacaacc aaggtatggc ccgcattgtg gccgccttgg
    31501 aagcgcacca cgccgccggc ttcttccgcc agccagtcaa cgattttacc tttaccctcg
    31561 tcgccccact gtgcgccgat tactacaaca tttttagcca tagccatata acctatcgat
    31621 attaaaaatt attgcggaaa tccccaaacc ggtgcggctt tgcgccccgc cacgatttgc
    31681 ctttcatccg ccatgaacgg gtatttagcg tttcacgacc tgccaaacgc cgtccgtctt
    31741 tttcagacgg cctgcaagct cttccgaaac attgtgtccg ataccgtagt caatcacgac
    31801 acactgccct tgttcacgca aggcttcgac tgcttcgcgc gccgcttcgg catcttccgc
    31861 atcgaccaac acggcgggct gccgttcgat ggtgggcaaa cgcccgataa agctgcgcaa
    31921 gtcgaaactg aatcccgttg ccgggcgcgc cctgccgaaa tatccgccca atccgtcata
    31981 acgcccgccg cgcgcgaccg cgtcgtggaa atcggcggca taggcggcat acagcaagcc
    32041 cgtgtggtaa ttgtcgacac gcagctcgga caagtcgata tggatttcac aatcggggaa
    32101 tgcgtcgcac accgcctgca attcgcccaa cgcgccgccg accgccgaca aatccggcaa
    32161 ccgtccgcgc gcgtcggaca acacttcacg cccgccgtac aggcgcggca acagcgagaa
    32221 tgcttttgcc cacatgccgt ccagcttcca agccttgacc tgcgcttcga ccgccccggt
    32281 atctttatcc tgcatcaagg caagcagcgt tgcggactgc cccgcatcca aatgtgccgc
    32341 atcggacaag gcgcgaaata tgccgatatg ccccagcgaa agcagcactt tgcccatatc
    32401 ggcaattttc atgcttttca gcataaggtc tatcagctcg atgtcgccac ggatgtcggc
    32461 aaaaccgtac atttccgccc ctgcctgcaa gggttcgcgc atattcagca gaccgtcggg
    32521 ctgcgcgtgc aacaccggac cggcataaca caaccgatta atcccttggt tggcggataa
    32581 aagatgggca tcgatacgcg ccacctgcgg cgtgatgtcg gcgcgtatgc ccaactgcct
    32641 gccgctgagc ctgtccgtta ccaaaatggt tttcagggaa agccccgcat cgatatgcgt
    32701 cagcagggaa tgtgcgtact ccatcagcgg aggctgtacc agttcataac cgtgtacgcg
    32761 gaacagtgcc aacaactgct ccctcgcgct ttcaagctgc cgcgcgttcg tgggcagtac
    32821 gtcggcgata tgttccggaa gctgccatgt ctgcatgaga atctgccttc tattttatca
    32881 tgtaaataca aaaggctgcc cgatccgcaa tcagacggca tctttgccgc aacgcatcac
    32941 gccgctgtca aaacggcgat gcttccttcc gattcagaat ccgaacagcc cctgtccgac
    33001 ggctcaatgc cgtcaagtcg ttaaaaccaa actttaccat aaaatacaca caatctgaat
    33061 atacttttat accctgtatc cgccgtctga cggcacggca tttttttact atataatgtg
    33121 caccattatt tctcatcact tcctgctgcc gttttctgct tcagacggca tttttgttga
    33181 ttgaacactt atgctgctcg acctcaaccg cttttccttt tccgtcttcc tgaaagaagt
    33241 ccgcctgctg accgctcttg ccctgcccat gctgttggcg caggtcgcgc aggtgggcat
    33301 cggttttatc gatactgtga tggcgggtgg tgcaggcaag gaagacttgg cggcggtggc
    33361 tttgggcagc agcgcgtttg ccacggttta tattaccttt atgggcatta tggcggcgct
    33421 gaacccgatg attgcccagc tttacggcgc gggtaaaacc gacgaagtgg gcgaaacggg
    33481 gcggcagggg atttggttcg ggctgttttt gggcgtgttc ggcatggtct tgatgtgggc
    33541 ggcgattacg ccgttccgca actggctgac cttgagcgat tatgtggaag gcacaatggc
    33601 gcagtatatg ctgttcacca gcttggcgat gccggcggca atggtacacc gcgcactgca
    33661 cgcctacgcc tccagcctga accgcccgcg cctgattatg ttggtcagct ttgcggcgtt
    33721 tgtgttgaac gtgccgctga actatatttt cgtttacggc aaattcggta tgcccgcttt
    33781 gggcggcgca ggctgcggac tggcgacgat ggcggtgttt tggttcagcg cgctggcatt
    33841 gtggatttat atcgccaagg aaaatttctt ccgcccattc ggactgacgg cgaaattcgg
    33901 caaaccggat tgggcggtgt tcaaacagat ttggaaaatc ggcgcaccca tcgggctgtc
    33961 ttattttttg gaagccagcg cgttttcgtt tatcgtgttt ttgattgcgc ctttcggcga
    34021 ggattatgtg gcggcgcagc aggtcggcat cagtttgtcg gggattctct atatgattcc
    34081 gcaaagcgtc ggctcggcgg ggacggtgcg catcggcttt tcgcttgggc ggcgcgaatt
    34141 ttcgcgggcg cgttatattt cgggcgtgtc actggtgtta ggatggatgc tcgccgtgat
    34201 taccgtgctt tccttggtat tattccgttc gccgctggta agtatgtaca acaatgatcc
    34261 ggcggtttta agcatcgccg ccaccgtctt actgttcgcc ggcttgttcc aaccggcaga
    34321 cttcacccaa tgtatcgcct cctacgcctt gcgcggctac aaagttacaa aggtgccgat
    34381 gttcatccac gccgccgcct tttggggctg cggtctgctg ccgggctacc tgctcgccta
    34441 ccgtttcgat atgggcattt acggcttctg gacggcattg attgcctcgc tcaccatcgc
    34501 cgccatcgcc ttggtgtggt gcttggaatt gtgcagtagg gagatggtca gatcgcataa
    34561 ggccgtctga aaactccgcc gattaaaaat atagtggatt aacaaaaacc agtacggcgt
    34621 tacctcgcct tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgattttt
    34681 gttaatccac tatagaaacg atgggctgaa gcccgccact ggcaatactc attttaaagt
    34741 tcaaacccat gcaacccatc cgataccgaa ccgaccttac cccctacaac actttcggcc
    34801 tgcgcgccca agcccgagcc tttattgcgc ttgaacacgc cgacgggttg cgcgacatcg
    34861 tccggctacc cgagttcaac cgagatactg ttttatggct gggcggcggc agcaatatcc
    34921 ttttgatgga ggactacgcc ggtctggtcg tacatatgga aaacaaaggc atacgcgaaa
    34981 ttgctcgttc agacggcatg gttctgattg aagcgcaggc gggcgaaatc tggcacgatt
    35041 ttgtcctgca cgccgtcgcg ctgggtttga acggtttgga aaacctgagc ctgattccgg
    35101 gtacggtcgg cgcgtcgccc gtgcagaaca tcggcgcata cggcgtagag gcgaaagatg
    35161 tgattcacag cgtgcgctgc ttcgatttgg atacggaaac ctttgtaacc ctttccaatg
    35221 ccgactgccg cttcgcctac cgcgaaagcc tgttcaagca ggaaggtaaa gggcgttatg
    35281 tgattgtttc ggtcgtattt gcattaaaaa cgcattttgt gccgaacttg ggttacggcg
    35341 atttggcggc cgccgttgcc gaactgagcg cgggcagggt gccgacggcg aaagatgttt
    35401 ccgatgcagt gtgtgcaatc cgcaacagta aacttcctaa tcctaacgtg cttggcaatg
    35461 tcggcagttt ctttaaaaac cccgtcgtca gcgcagaaaa agccgccacc ttgttgcagc
    35521 ggcatcctga tatgccgcgc tatccgcagc ccgacggttc ggtcaaactc gccgccggct
    35581 ggctgatcga ccaatgtcgt ctgaaaggct ttcaaatcgg cggcgcggcg gtacatgaca
    35641 ggcaggcttt ggtcttagtg aacaaaaaca atgcctcggc aaacgatgtc cggcaattgg
    35701 cgcaacacat caaatttaca gtatttgctc ggtttcaggt agaattgcac gccgaaccca
    35761 attggctgcc tgcttcgttc agcctgtaaa tccaaggagt atgcccgtga cccgccccgc
    35821 caaaatcaat acttacacac gcatcatcga cgccagcctt gcgcttttca acgaggaagg
    35881 cgagcgcaac atcagcacca accatattgc cgcccacttg ggcatcagtc cgggcaacct
    35941 ctattaccac ttccgcaaca aagacgaaat catcgtccaa ctgttcaaac gttacagcga
    36001 agccctgctg gaatacctca acgaagccgt gttgccgtct gatgtggaag actccatcaa
    36061 ttatatggcg ggcatttacg acgtgatgtg ggaataccgc ttcctattca gcgacgtgaa
    36121 caccctgctt gcacgcagtg ccgaactatt gggcgaacac aataccttca cccaagccaa
    36181 agtctccccg ctcttggtca acctactgac ccagctcaac ggtctgaaca tcatccaagc
    36241 cgaccaaacc gccatgaacg acctcgccgt caatatgtgg atgatcacga aatactggtt
    36301 cgacttcgac agctccctgc gcggtcgtac caagctgacc gaagactcca aagcacgcgg
    36361 catccgccgc accttaagcc tccttcgtcc ttatcttttg cccgaacacc gcaagaaata
    36421 cgaccggaaa atcggcaacg gcaacccgta aacccacagc gtccgaatca gccttcagac
    36481 ggcacttacc cgacggtatc agcgaatgcg cgcagtcccc ccgccccata tctccatcac
    36541 aggcctaggt tacctcggcc tgccgctggc acaaaagttt taccaacacg gcagccgcgt
    36601 cgccgccata aaacgcagcc tgacttcgga cgacatcaac ctgcccatac acctcgatac
    36661 catcgacctc aatcaagaca gcgcgtttca aagcgcgaac cttgcccgag atacaagctt
    36721 ttggcggcac catgccaaca aacccgtttg gttctgcctc ttgccgccat catcgctgac
    36781 acattacgcc gataccgtca aacaatgggc agaacttgcc cgggcgtgca acgtgcaaca
    36841 cctgattttc acaagcagta ccagcgttta cggcgataca gcgcgcgaat gcgacgaaat
    36901 cgccctaccc gatccgcaaa ccgagtccgc ccgccaaatc ctcgccgccg aacaacacct
    36961 gctcgacagc ggcgttccga acatcgacat cctgcggctg ggcgggcttt attgcgccga
    37021 acgccatccc gtcagccgcc ttgttcaaaa gcaaaacatc ccgggcggca accgccccat
    37081 caacatcgtc caccgtaata tcgccgtcga aagcctgttt cagacggcat ttaaccccag
    37141 cggcaggcgg ctgaaaaaca ttatcgaacc gcgccacccg acacgccgcg aattttttac
    37201 ggaagaagcc gccaaactcg gcctgcccgc gccggatttc gcacccgacg acagcgtggg
    37261 caaaatcatc cgtaccgttt gcgataacgg cttaagcctg taaaataagc ggcaacagca
    37321 acaaacaggc attctccgcc ccaatcagaa aatatgtccg ccttcctccc catcatcaac
    37381 cgcctgattc tgcaaagccc ggacagccgc tcggaacttg ccgcctttgc aggcaaaaca
    37441 ctgaccctga acattgccgg gctgaaactg gcgggacgca tcacggaaga cggtttgctc
    37501 tcggcgggaa acggctttgc agacaccgaa attaccttcc gcaacagcgc ggtacagaaa
    37561 atcctccaag gcggcgaacc cggggcgggc gacatcgggc tcgaaggcga cctcatcctc
    37621 ggcatcgcgg tactgtccct gctcggcagc ctgcgttccc gcgcatcgga cgaattggca
    37681 cggattttcg gcacgcaggc agacatcggc agccgtgccg ccgacatcgg acacggcatc
    37741 aaacaaatcg gcaggaacat cgccgaacaa atcggcagat tttcccgcga acccgagtcc
    37801 gcaaacatcg gcaacgaagc ccttgccgac tgcctcgacg aaataagcag actgcgcgac
    37861 ggcgtggaac gcctcaacga acgcctcgac cggctcgaac gcgacatttg gatagactaa
    37921 ccttcagacg gcatccgaca tgaacagccc ttttcacaac atcggcatcg taacccgccc
    37981 caacacgccc gacatccaag acaccgcaca cacgctgatt acctttttga agcagcacgg
    38041 ctttaccgtc tatctcgacg aagtcggcat aaaggaaggc tgcatctata cccaagacac
    38101 cgtcggctgc catatcgtca acaagaccga actggggcaa tactgcgacc tggtcgccgt
    38161 tttaggcgga gacggcacct ttctctccgt cgcccgcgaa atcgccctgc gcgccgttcc
    38221 gattatcggc atcaaccaag ggcatttggg cttcctgacc caaattcccc gcgaatatat
    38281 gacggacaag ctattgcccg ttttagaagg gaaatacctt gccgaagagc gcatcctgat
    38341 tgaggccgca ctcatccgcg aaggcaaaac cgccgaacgc gccatcgccc tcaacgatgc
    38401 cgtcctctcc cgtggcggcg ctggacagat gattgagttt gaagtcttcg tcaatcggga
    38461 attcgtctat acccagcgtt cggacgggct gattgtctcc acccccaccg gatcgaccgc
    38521 ctattcgctt gccgccggcg gccccatcat gcaggcagga ttacacgcct tcacactcgt
    38581 acccatctgc ccgcaatcca tgaccaaccg ccccatcgcc attcccgaca cgtctgaaat
    38641 cgaaatcctc gttacccaag gcggcgacgc gcgcgtccat ttcgacggtc aaacccatat
    38701 cgacgtgcaa aacctcgacc gcatcaccat ccgccgctac cgaaatccct tacgcatttt
    38761 gcacccgacc gactaccaat atttcaaaac cctgcgccaa aaactgcact ggggcgaaca
    38821 attggtctga accgaccctt accggaaaac acctatgaat ccaaaaactc cccccgacca
    38881 tacagaagat gccgtgcgcc tctccaaacg catggcgcaa ctggggcttt gttcgcgccg
    38941 cgaagccgac ggctacatcg aacagggctg ggtaacggtc aacggcaaaa ccgccgtact
    39001 cggtcagaaa gtttcaccgg cagaccgtat cgaactgaac aagaaagccc acgaacagca
    39061 ggcggcacgc attaccatcc tgttgaacaa acccgtcggc tatgtcagcg cacaagcgga
    39121 aaaaggctat aaatccgccg ccgaactgat tacccctgaa aatcactggg aaggcgatac
    39181 cggccgcatc cgtttcgatc cgaaacacaa aatcggcctc gcccccgccg gcaggctgga
    39241 catcgactcg gtcggattgc tggtattgac tcaggacggc cgtatcgcca agcagcttat
    39301 cggcgaaaac agcggcagtg aaaaagaata tttggtgcgc gtgcgcggca aattggacga
    39361 aaaaggactt gccttactga atcacggatt gagtttggac ggcgagaaac tgcgtcccgc
    39421 ccaagtagaa tggcaaaacg aagaccaact gcgtttcgta ttgaaacaag gtaaaaagcg
    39481 gcaaatccgc cgtatgtgcg aactggtcgg actgcgcgtc gtcgggctga aacgcatccg
    39541 catgggtaag gtcaagctcg gcaggctgcc gcccggcaaa tggcgttatc ttgctcccgg
    39601 cgaatcgttt taaataagca ttaaaaaatg ccgtctgaac gtccttacgt tttcagacgg
    39661 cattgcctta tgcccaaata acggtttctt ccaagggcct gcgcgctttc gtggcgattt
    39721 cctgaacgcg gtagccgaat gtcgcggcaa cggacacgcc ccattctgcc gcatcgaaca
    39781 aaccgaactg cccggacaat acgcgttcca tatcggcata gttgaaacct tccaccgggc
    39841 aggaatcgat acctgccatc gccgcacccg tcatcatgtt gcccaacgcg atataggtct
    39901 ggcggcaaca ccagtcaaac aaggcgcgcg aatcgtccaa aatcttgatg tcgtcggctt
    39961 gaaacgcctg atacctcgcc aaagattttg ccatggcatc cggttcggta acgccgcgcc
    40021 gtttgaggct ttccaacata aacgggctgt cgaagcgggc atttttcttt gccaaaaaca
    40081 ccaccaaatg actggcggta tccaaagcat ccgccatacc ccaagaaaac ggcttgattg
    40141 cctgtcggat ttcggggttt tgaaccacaa caaactgcca aggctccgaa ccgaccgaac
    40201 tgggcgacaa acgcccgagt tctaaaataa actgaaaatc ctcggcactg attttacgtg
    40261 ccgcatcgta atgccggcat gatttgcggt ttttaaatgc ggatagaacc tgctctttgc
    40321 ttaatactgc catcgcacat cctttcatta cttgtattgc aaattgattt caaaccgata
    40381 cggcactgcc gcaccataca atccgtcctc gccatcaagc ttcatccgga ctttacccat
    40441 ctctctacgg ctgggaaaac aaagcggcgg cagactcggg aataacgccc caatgccttt
    40501 cagacggcat ttgggcatca ttgcaaacgc gcctacgggt aggcgatata ggcataagcc
    40561 gaatggttgt ggatagactc gaaattctcg ctctcgacaa cgaaactctt gatgcgtttg
    40621 tcggcgatca gcgaagtagc gacatcgcgc accatatctt ccacgaattt cgggttttcg
    40681 taggcctttt cggtaacgta tttttcatcg gggcgtttga gcaggccgta gagttggcag
    40741 ctcgcctgcg cctccacata atcgatgact tcctcgatac cgacttcggc atcggcagtc
    40801 aggctgacgg taacgtgcga acgctgatta tgcgcgccgt attgggaaat ttctttggaa
    40861 cacgggcaaa gcgaggttac gggaatcatg accttcatac tgtggccgta tgccccgtct
    40921 ttgatttcgc ccgtgagaca gacatcataa tccagtaagg accgaatacc ggaaaccggc
    40981 gcggttttct tgcggaaaaa cggaaaagaa acgctgattt tgccggcgcg ggaatctaaa
    41041 agcgcgacca tttcggtagt cagcttgcgc aattgtgcaa aatccaaggc ttcggcatgt
    41101 tgctccatca atgcgacaaa acgcgacata tgcgtcccct tctgctcagc aggcaggtaa
    41161 accgtcatgg tcagacgggc aatggtggac tggatgcctt ctgcagtttg cagggtaatc
    41221 ggaaagcgca ggtctttgat accgacctga ttgatcggca gattgcgcaa atctcggctg
    41281 gattgcacgt ctgcaatagt gttcatgagt tgtttttcct taatattcat gtaattgttg
    41341 agatgtgtgc atggtatggc gtttccgccg gggaatatac cgtcaatctg caaatgcgag
    41401 attatatcac tcgcttttag cagctgcatt gattgtttct atttttcaga tagtgataaa
    41461 atcttcgatt attcacatct acataggcag agaccaaatg aaattcgcca cgaaagccat
    41521 tcattccagc tacgattgcg acgaacacaa ccgcgcgctg atgccgccga tttatcaaaa
    41581 cagtatgttt gcgttgcacg agattggcga aaatgtgcct taccgttatt cgcgcctgag
    41641 caacccgacc cgtcagattt tagaagacac cgttgccgat ttggaacacg gtgcggcagg
    41701 ttttgcgttt tccagcggta tggcgggaat tgatgccgta tggcgcactt tcctgcgccc
    41761 gggcgatacc attgtcgccg tcgccgatat ttacggcggc gcttatgatt tattggtcga
    41821 tgtttatcaa aaatgggggg tgaacgttgt ttttgccgat ttaggcaatc cggataattt
    41881 ggacgaactg cttaaagcgc acaaggtcaa actggtttgg ctggaaacgc cgtccaatcc
    41941 acttttacgc ttggtagaca tcaaagtcct tgccgcaaaa gccaaagcag ccggtgcgct
    42001 ggtcggtatc gacaacactt ttgccacgcc gtatctgcaa cagccgttgg atatgggttg
    42061 cgattttgta ttccattccg ctaccaaata tttgtgcggc cattccgacg tgttgatggg
    42121 catcgtcgtt gccaaaacca aagaactggc gcagcctttg cacgatatga tggtgcatac
    42181 cggcgcggtt gccggcccgc tggactgctg gctggtgttg cgcggcatca aaacgcttgc
    42241 cctgcgtatg gaggcacact gcaaaaacgc actcgaaatc gcgcgccgtc tggaagacca
    42301 tcctgccatt gaaaaagtgt tctatcccgg cctgccgtcg cacgaacatt atgaactcgc
    42361 ccaagcgcaa atgcctaaag gcatcggcgg cgtggtgacg gtttatctca aaaacgacac
    42421 gcgcgaagcg gcaaacagcg tgattaaaaa catgaaactg gtcaaaatgg cttccagcct
    42481 cggcggcgtg gaaagtttgg tcaaccattg ctattcccag tcccacagcg gcgtgccgca
    42541 taatgtgaaa atggaaatgg gcatcaaagt cggcctgctg cgtttctcca tcggcatcga
    42601 agacgcggac gatatttgga acgatatttc cgccgcactc gatacgactt tgtaaaccgt
    42661 aaaaatgccg tctgaaacca tagtttcaga cggcatttca atattgcgaa tcaaatatca
    42721 acgcttcagc atcttggccg cctcaatggc ataataggtc aaaatcccat ccgcgcccgc
    42781 acgtttgaat gccagcaggc tttccaaaac cactttatcg ccatccagcc atccgttggc
    42841 aaccgccgcc tgtagcatcg catattcgcc cgaaacctga taggcataag tcggcacacc
    42901 gaactcgtcc tttacgcggc ggacaacgtc caaatacggc aaaccgggct tgaccattac
    42961 catatccgca ccttcctgaa tgtccaacgc cacttcgtgc aacgcctcat cggtatttgc
    43021 cggatccatc tggtaggtct ttttatctgc cttgcccaaa ttgcccgaac tgcctaccgc
    43081 atcacggaaa gggccgtaaa atgcagaagc atatttggcg gaatacgcca taatccgcgt
    43141 atggatatgc ccggcatcct ccaacgcctc gcgaatcgca ccgatacgcc cgtccatcat
    43201 atcggaaggg gcaaccacct gcgcgcccgc ttcagcgtgg cacaaagcct gcttgaccaa
    43261 aacctctacg gtttcatcgt tcatcacata accgttttcg tccgtcagcc cgtcctgacc
    43321 gtgcaccgta taaggatcga gcgcgacatc cgtcataatg cccagttcgg gaaacctctc
    43381 acgcaaggct cggacggctg tcggcaccag tccttcaggg ttatacgcct cctgcgcaca
    43441 ttctgtctta tttgtcgtaa cgacagggaa tagtgccagc atgggtattc ccaaatttga
    43501 cgcttcctcc gccgtaaaca gcagcctgtc caaactttga cgcttcacac ccggcataga
    43561 aggcacatcc tcctcgcgcg ccgacccctc caatacgaac accggataaa tcaaatcatc
    43621 ggcggtcagc gtgtgttcgc gcatcaggcg gcgtgaaaaa tcgtccctgc gcatacggcg
    43681 catacgcgaa gccggaacat tgcggtaagg aaactgcata agccctccaa tcatcctgtc
    43741 aacaattcaa accatacgga agccgccgca acttgcagac agcatcgggc ggcaatcaaa
    43801 atccgttttc accggaaagg gtttcggccc gccgaaatgc cgcgccgaag gacggcgtcc
    43861 cgcccattaa agaacaatag caaaacaaca gcttcaggct gtcagccttc gatattctta
    43921 cgccacaata ccaaaagttt cccgatatgc tgaacaggtt gcgcgtcaac cgcctcacat
    43981 aaggcagtgc agatttcgat acgttcggca cggtcgtcgc cgaatacgcg cactttaatc
    44041 agctcatgcg ccgtcaatgc cgcatcggtt tccttgatga ccgcgtccgt cagaccctgc
    44101 tgaccgacca tcacaacagg atggagatgg tgcgcgcgcg ctttcagttc caaaatttct
    44161 ttggtgttca atttggtatc cgtcattttc ctactgcttg aataaaaaga ataatgcggc
    44221 attgtacgcg atttggcacg acatcggcaa aattaacgta caatacgcgg tttccattcc
    44281 gacccgcgaa ccactatggc tgtacgttcc aaatcctcaa aagcgtggct gcacgaacac
    44341 gtcaacgacc actacgtcca tatggcgcaa aaagacggct accgcgcccg tgccgcatac
    44401 aaacttttgg aaatcaacga aaaagacaaa ttaatcaaac ccggcacggt acttgccgac
    44461 ttgggcagcg caccgggaag ctggtcgcag gttgccgcca agctgacggg tacttccgga
    44521 gcagttttcg ccttggacat cctgcctatg gaagccatag ggggcgtctc cttcattcag
    44581 ggcgacttcc gcgagaacga cgtactggca caattcgaaa ccttgttgga caaccgcccg
    44641 ctcgaccttg taatttgcga tatggcgccc aatatgtcgg gaaacgccgt aagcgatcag
    44701 gcacgcagct tttatctgtg cgaactggct ttagacttcg cctcgcaaca cctgaaaacc
    44761 ggcggcagct ttttggtcaa agtctttcag ggtgcaggct atcaggaata catggcagcc
    44821 atgcgcgaaa ttttcggcac ggtgcagacg cgcaaacccg aagcctcgcg caatcgctcc
    44881 agtgagattt atttattggg caaaaataaa cgctgacaat acagacggcg tgctttacaa
    44941 tcatttccgt tttacacctc aattatggag ccttgctaag tggggaacac ctttaaatca
    45001 atccttgtct gggtcgcctt gggtatcggc ctgatggctg cgttcaacgc tttagacggt
    45061 aaaaaagaag acaacgggca aatcgaatat tctcagttca tccaacaggt caacaacggc
    45121 gaagtatccg gcgtcaacat cgaaggatcc gtcgtcagcg gctacctgat taagggcgag
    45181 cgcaccgaca aaagcacctt cttcaccaac gcgcctttgg acgacaacct gattaaaaca
    45241 ctgctcgaca aaaacgtccg tgtaaaagta acgccggaag aaaaaccgag cgcgctggct
    45301 gccctgtttt acagcctgct gcccgtcctg ctgctgattg gcgcgtggtt ctactttatg
    45361 cgtatgcaga cgggcggcgg cggaaaaggc ggcgcattct cattcggcaa aagccgcgca
    45421 cgcctgctgg acaaagatgc caacaaagtg acctttgccg atgtcgccgg ctgcgacgaa
    45481 gccaaagaag aagtgcagga aatcgtcgat tacctcaaag caccgaaccg ctatcaaagc
    45541 ttgggcgggc gcgtgccgcg cggcatcctg ctggcgggca gcccgggtac gggtaagacg
    45601 cttttggcaa aagccattgc aggcgaagcc ggcgtgccgt tcttcagcat ttcaggttcc
    45661 gactttgtcg aaatgttcgt cggtgtcggt gcgagccgcg tccgcgatat gttcgagcag
    45721 gcgaagaaaa acgccccctg catcatcttt atcgacgaga ttgacgcagt cggccgccaa
    45781 cgcggcgcag gtttgggcgg cggcaatgat gagcgcgagc aaacattaaa ccaattgttg
    45841 gttgaaatgg acggttttga gagcaatcag actgtaattg tgattgcggc aaccaaccgc
    45901 cccgacgtac tcgatcctgc gctgcaacgc cccggccgtt tcgaccgcca agtcgtcgtc
    45961 cccctgccgg acatccgggg gcgcgaacag attttgaacg tccattctaa aaaagtgcct
    46021 ttggacgaat ctgtggattt attgtccctc gcgcgcggca cgccgggttt ttccggtgcg
    46081 gatttggcaa acctggttaa cgaagccgcc ctgtttgccg gccgccgcaa caaagtcaaa
    46141 gtcgatcaaa gcgattttga agacgcaaaa gacaaaatct atatgggtcc ggaacgccgc
    46201 agtatggtga tgcacgaaga cgaaaaacgt gcgacggcgt atcatgagtc cggacacgcg
    46261 attgttgccg aaagcctgcc ctttaccgac cccgtccaca aagtaaccat tatgccgcgc
    46321 ggacgtgcgc tgggtctgac ttggcagctt ccggagcgcg accgcatcag tatgtataaa
    46381 gatcagatgt tgagccagct ctccatcctg ttcggcggac ggattgccga agacatcttc
    46441 gtcggacgca tctccaccgg cgcatcaaac gactttgaac gcgcaaccca aatggcgcgc
    46501 gaaatggtaa cgcgctacgg catgagcgac aaaatgggcg tgatggttta tgcggaaaac
    46561 gaaggcgaag tcttcttagg acgcagcgta acccgttcgc aaaacatttc cgagaaaacc
    46621 cagcaggaca tcgatgcgga aatccgccgg attttggacg agcagtatca ggttgcctac
    46681 aaaatcctcg atgaaaaccg cgacaagatg gaaaccatgt gcaaagccct gatggaatgg
    46741 gaaaccatcg accgcgatca ggtactggaa atcatggcgg gcaaacaacc cagtccgccc
    46801 aaggattaca gccacaacct gcgcgagaat gcggacgcgg cggaagataa cgcgccgcac
    46861 gctccgactc gggaagaaac cgaagcacct gccccggcag acaccgcttc gacagagtcc
    46921 gagcagcagc ctgaaaacaa ggcttaactt cccgaacaaa cggcagcccg caagctgccg
    46981 ttttcccatc ctgttttcag acggcatttt ccgctcaatg ccgtctgaaa cgccaaagcc
    47041 gtatcggttt ttgcggatct gcgatatggc ggtttaaatt gaaatcagac gaggcaaggc
    47101 tgtaccggtt taaaattaaa ccgctataat accgcccttc gaatacacgc ccgcattggt
    47161 gatgcctgtg aaaaaagttg aaaaaaacat cttggtgctg cacggcgcgg acaaaatgtt
    47221 cgagctggtc gataaggttg aagactatcc gcactttctg ccgtggtaca gcaagaccga
    47281 ggtcatcggg cgtagcggca acgaactgaa ggcgcggctg tttatggact atatgcacgt
    47341 tcgccaatca ttcgccacgc acaaccgcaa cattccgggc agggaaatcc gtatggaact
    47401 gctcgagggt ccgttcaaaa ccttacgtgg aacgtggaaa tttatcgatt tgggcgacga
    47461 tatgtgcaaa atcgaattca atttggaata cgatttttcc aatgccgttt tgtccgcctt
    47521 aatttccccc gtcttcaacc acctttccgt cacgctggtc gaagcgttcg tcaaagaggc
    47581 agaccgccgt tatgcttgaa attgagattg tgtacgggct gcccgaccga caggttttga
    47641 aaaccatgca gcttgccgaa ggaacaaccg tccgcgccgc cgcactgcaa agcggtttgg
    47701 acggcatatt tgaagattta aacctgcatt ccgcgccttt gggcattttc ggcaaagccg
    47761 tcaaagacga cacgccgctg cgcgacggcg accgcatcga agtgtaccgc ccgctgttga
    47821 tcgaccccaa agaagcgcgc cgcaaacgcg ttcaaaatca agaagaataa ccatgccgtc
    47881 tgaagccttc agacagcatt cgacagaaac acggaaaata tcatgtcaaa cacaatcaaa
    47941 atggttgtcg gcttgggcaa cccgggcaaa gaatacgaac agacacgcca caatgcgggt
    48001 ttttggttcc tcgacgaact ggcgtggaaa tggaaggctt catttaaaga agaaaaaaaa
    48061 ttcttcggcg aagtcgcccg tgccgccctg cccgacggcg acgtttggct gctcaaacct
    48121 gccacgttca tgaaccgttc cggacaggca gttgccgccc ttgcgcagtt ttataaaatc
    48181 aaacccgaag aaatcctcgt cgtccacgac gaactcgaca ttccctgcgg acggatcaaa
    48241 ttcaaactcg gcggcggcaa cggcggacac aacggcttga aagacattca ggcaaaactc
    48301 ggcacggcag actattaccg tctgcgcctc ggcatcggcc acccgggcga ccgcaacctc
    48361 gtcgtcggct atgtcctgaa caaacccagt acggaacacc gccgacagat tgacgatgcc
    48421 gtcgccaaat ccctgcaggc catacccgac atccttgccg gcaaatggga agaggcaacc
    48481 cgcttcctgc acagcaaatg acccgatgcc gtctgaagcc ctttcagacg gcatgttccc
    48541 gatttccata tccgaacagt catgaccgaa ctcaagcagc ttatccaaac cgaatccatc
    48601 cccgtcatcg aagaaaccct cgatttcctg ctgtacgaat gcagcatcga cgacgcacca
    48661 tccgccgaag aagtggcaca atggcgcgac atacttgccg cacgcggcgg caaattcctg
    48721 cgcctgtcca aaatctgcca aacgtggctg gacgaggagg cggcatgaag ctgccgcgca
    48781 accgcttcag cctgctttcc gcattgtggt ttgccggcgg catctattcg ctgctcttca
    48841 aagctgccga caccgcgccg ccgccgtttc cgcatttcga caaagcagca caccttgccc
    48901 tgtttttcgc acaaatctgg cttttgacca aagcattcaa aaccggaaaa cttcccatcc
    48961 cctaccgcag cctgatggtc tttgccctct gtttcgccct cttcagcgaa tgcgcgcagg
    49021 catggtttac cgcaacgaga accggcagtt tgggcgatgt tcttgccgat atggcaggta
    49081 cggttctcgc actctttgcc gcccgcgccg ccgaccgccc ggactgaatc ggtttatttc
    49141 ccccaaacag gatgcacctc ttcccgatac atcctatttt tccccttaca tatcaatccc
    49201 atctcataaa caaaaccgac aaatcgttta caatatattt acactacatc agattacaaa
    49261 tatactcgaa ccagttgcag aagcggcgat tccacaaacc gtttcggatt gcacgacaca
    49321 aaagaaaaac cgattttgtt gccttaaagg agtattcatg aacctgcatg caaaggacaa
    49381 aacccagcat cccgaaaacg tcgagctgct cagtgcgcag aagccgatta ccgactttaa
    49441 gggcctgctg accaccatta tttccgccgt cgtctgtttc ggcatttacc acatcctgcc
    49501 ttacagcccc gatgccaata aaggtatcgc gttgctgatt ttcgttgccg cactttggtt
    49561 taccgaagcc gtccacatta ccgtaaccgc actgatggtg ccgattctcg ccgtcgtact
    49621 cggtttcccc gacatggaca tcaaaaaggc gatggctgat ttttccaacc cgattatcta
    49681 catttttttc ggcggcttcg cgcttgccac cgccctgcat atgcagcggc tggaccgtaa
    49741 aatcgccgtc gccctgctgc ggctgtcgcg cggcagtatg aaggccgccg tgctgatgtt
    49801 gttcctcgtt accgcctttc tgtccatgtg gatcagcaac accgccaccg ccgcgatgat
    49861 gctgcctctg gcaatgggta tgctgagcca cctcgaccgg gaaaaagaac gcaaaaccta
    49921 cgtcttcgtc ctgctcggca tcgcctattg cgccagcatc ggcggcttgg gcacgctcgt
    49981 cggctcgccg cccaacctga ttgccgccaa agccctaaat ctggacttcg tcggctggat
    50041 gaagctcggc ctgccgatga tgctgttgat tctgcccttg atgctgctct ccctgtacgt
    50101 catcctcaaa cctaatttga acgaacgcgt ggaaatcaaa gccgaatcca tcccttggac
    50161 gctgcaccgc gtgatcgcgc tgttgatttt ccttgccaca gccgccgcgt ggatattcag
    50221 ctccaaaatc aaaaccgcct tcggcatttc caatcccgac accgttatcg ccctgagtgc
    50281 cgccgtcgcc gtcgtcgtct tcggcgtggc gcaatggaag gaagtcgccc gcaataccga
    50341 ctggggcgtg ttgatgctct tcggcggcgg catcagcctg agcacgctgt tgaaaacatc
    50401 cggcgcgtcc gaagccttgg gacagcaggt tgccgccacc ttttccggcg cgcccgcatt
    50461 tttggtgata ctcatcgtcg ccgccttcat tatttttctg accgagttca ccagcaacac
    50521 cgcctccgcc gcattgcttg taccgatttt ctccggcatc gctatgcaga tggggctgcc
    50581 cgaacaagtc ttggtattcg tcatcggcat cggcgcatct tgtgccttca tgctgccggt
    50641 tgccacaccg cctaacgcga ttgtgttcgg cacgggctta atcaagcaac gcgaaatgat
    50701 gaatgtcggc atactgctga acatcctctg cgtagtattg gttgctctgt gggcttatgc
    50761 tgtactgatg taaaccatcg acctaaacaa caagaccgtc tgaaagaata tttttcagac
    50821 gaccttgaag tttgtcgttc agacacaatt tgtcgaatca ttcaaaaccg gattctaacg
    50881 aaaggaaacc catgattatc ctgcacacca acaaaggcga catcaaaatc gaactcgatt
    50941 tcgacaaagc ccctgttacc gccaaaaact tcgagcaata cgtcaaagac ggcttctacg
    51001 acggcgtaat cttccaccgc gtcatcaaag gcttcatgat tcaaggcggc ggcatggatg
    51061 aaaacatgaa cgaaaaagaa acccgcgatc cgattcaaaa cgaagcgtcc aacggcctgc
    51121 ccaacgataa atacaccatc gccatggcac gcacttccga cccccattcc gccagcgcgc
    51181 aattcttcat caacactgcc gacaacgctt tcctgaactt ccgttctaaa gagctgtacg
    51241 gcaaaaccgt cgtccaagac tggggctatg ccgtattcgg taaagtcgtt gacggttttg
    51301 acgttgtcga tgccatcgaa ggcgtttcta ccaaacgtca tggttaccac gacgacgtac
    51361 cgagcgaacc tgtcgtcatc attaaagccg aagcggtata aaccgacaat ccgaaagcag
    51421 cctgcacaaa ggctgctttt atttcagacg gcatgttatt tgatgtaacc gtgctatgcc
    51481 gtctgaaaac cggacgcaag ccttcagacg gcataccgct atgttaaaat atgcccgttt
    51541 ttcctaaacg gacacaaagg aaaccttatg gcaaatattg cccgcgacat cttcaaagcc
    51601 tacgacatcc gaggcattgt cggcaaaacc ctgaccgacg atgccgccta tctcatcggc
    51661 agggccatcg ccgccaaagc cgccgaaaaa ggcatgaccc gcatcgcgct cggacgcgac
    51721 ggacgcttga gcggtcccga actgatggag cacatccaac gcggctttac cgacagcggc
    51781 atcgacgtcc tcaacgtcgg tatggtcgcc acgcccatgc tctattttgc cgccatcaac
    51841 gaatgcggcg gcagcggcgt gatgattacc ggcagccaca atccgcccga ttacaatggt
    51901 ttcaaaatga tgctcggcgg cgacacgctc gcaggcgaag ccattcaaga acttttagcc
    51961 attattgaaa aagacggttt tgttgccgcc gacaaacaag gcaacgtaac cgaaaaagac
    52021 atctccggcg aataccacaa ccacatcgtc ggccacatca aactcaaacg ccccatgaaa
    52081 atcgccatcg acgcaggcaa cggcgtaggc ggcgcattcg caggcaaact ctacaaaggc
    52141 ttgggcaatg aagttaccga acttttctgc gaagtggacg gcaacttccc taatcaccac
    52201 cccgaccctt ccaaaccgaa aaacctgcaa gacctcatcg tcgagctcaa aaacggcgag
    52261 gccgaaatcg gcttagcatt tgacggcgat gccgaccgct tgggcgtggt taccaaagac
    52321 ggcaacatca tctatccgga ccgccaactg atgcttttcg cgcaagacgt gttgagccgc
    52381 aatcctaaag ccaaagtgat tttcgacgtc aaatccaccc gtctgcttgc gccttggatt
    52441 aaagaacacg gcggcgaacc tgtgatggaa aaaaccggcc acagctttat caaatccgcc
    52501 atgaaaaaaa ccggcgcgcc ggttgccggc gaaatgagcg gacacatctt cttcaaagaa
    52561 cgctggttcg gcttcgacga cggtctgtac gccggcgcac gcctcttgga aatcctgtct
    52621 gcctccgata atccgtccga agtgttaaac aacctgccgc aaagcatttc cacgcccgaa
    52681 ctcaacatcg ccctgcccga aggcagcaac ggccatcagg ttatcgacga actcgccgcc
    52741 aaagccgaat ttgaaggcgc aaccgaaatc atcaccatcg acggtctgcg cgttgaattt
    52801 cccgacggct tcggtctgat gcgtgcttcc aataccacgc cgattctggt gttgcgtttt
    52861 gaggcggata cgcaagaagc catcgagcgg attcaaaacc aattcaaagc cgtcatcgaa
    52921 agcaatccga atctaatctg gcctctgtaa acacaggaaa aatgcttaat caaatcttgg
    52981 tagattggat ttggcttaaa aatctccgcg tccgttcgtg tttggggtgg tcgaacaact
    53041 ctttcgggct gccctgctct acgataacgc cgccgtccat cacgacaacg gtcgtggcaa
    53101 cttccagcgc gaacttgatt tcgtgggtaa cgacgaccat cgtccaacct tcccgcgcca
    53161 attccttcat ggcgttcaac acgtcttgca ccaactcggg gtcaagcgcg gaagtgggtt
    53221 cgtcaaacaa catcagctcg ggctgaatcg ccaatgctcg ggcaatgccg acgcgctgct
    53281 gctgaccgcc ggaaagctgg tagggataca aatccacttt gtcgcccaag ccgacttttt
    53341 ccagcagttt cagagcctct tcgcgcgctt gggcggcagg cttgccctgt acggcaaccg
    53401 gtccttccat cacgttttcc aaggcggttt tgtgcggaaa gaggttgtat tgttgaaaca
    53461 ccatgcctga tttgcggcgc agtgccaaaa tatcgtgttt gcttggtttt ttagaaaaat
    53521 cgattttcag cggtcgctcg ttgtcgaact cgatttgtcc gtcttcgggc atttccaacg
    53581 cgtttaggca tcgcagaaac gtcgttttac ccgagccgga aggcccgagg atgacgacca
    53641 cctgcccttt gcacacatcc aaattgatgc cgcgcaaaat ggtatttttg ccgaaggtct
    53701 tatggatatt gcggatttta atcatgacaa ctccttattt ggcgacatag cggtcgaagc
    53761 gtttttccaa gcgcgcctga atcaggaaca gcactttgca aaaacaccag taaaccaaag
    53821 cggcttcgat atagacgggc aaaaagtcat aagtgcggtt tgccgtttcc tgcgcgacgc
    53881 ggaataattc cgttaccgtc acgactgccg cgagcgaggt gtttttaaac aaaccgataa
    53941 actcgttgct caaaggcggc acggcaacgc gaaatgcctg cggcgcgacg atgcggcgga
    54001 acgtctgcat ataggtcatg ccgatggaga aacctgcttc ccattggcct ttcggtacgg
    54061 acaaaattgc cgcgcgtatg gtttcggaag catatgcgcc gacattgagc gaaaagccga
    54121 tgatggcggc aggaatcggg tcgatataga tgccgacgga aggcagcccg taaaacacaa
    54181 tcacaagctg aaccaacagc ggcgtaccgc gaatgacgga aatataaaat tccaccaatt
    54241 tcagcaggat tttccgcacg atgccgccgg cgggcataat ccgcaccaaa gccacggcta
    54301 ccgcaatcat cataccgata acgaaagaag ctgccgccaa aggcagagag accgcgaagc
    54361 cggctttgac cataggcaaa aacgcgctga caatcatatc ggcgcgtgtt tccgtcataa
    54421 acggcagcga agcaaggaaa ttattgaaca ctgatgtctt ttccgaagaa ttgttcgccc
    54481 agttttttca gcgtaccgtc ggctttcagc tcgttgattg ccgtactgaa tttcgccacg
    54541 gcttcgtcat tgcccttgtt gacaatcagg ccggaaccga ctttttcatc ggcaggtgcg
    54601 gaccaaacga ttttcacgcc cgcattcggg tttttcttca gatagtccaa aaccgccaat
    54661 tcgtcgttca gggttgcatc ggcacgtttt tgttcaatca gggtcagcga ttgcgccaaa
    54721 ccgtcaacag ccaccaaatc tgcgcctgca gctttggctt tttcgccgta gttgctggtc
    54781 agggattgtg cggttttcac gcctttgatg tcgtcgatag atttgatgtt gctgtcgtta
    54841 cgggcaacca atacggcacc gctccagctg taaggatcgg atttgtcgaa tgtcgcttgg
    54901 cgttcggggc tggtcagacc gacttggttt gccaccacgt cgaaacgccc cgccttcaaa
    54961 cccgccatca tcgaatccca ttgcgtttct ttaaactcga ctttcacgcc cagtttttcc
    55021 gccacggcgc gggttacttc cacatcgtaa ccggtcagtt tgccgtcctt gtcgtggtag
    55081 gtaaacggtg cgtaagtgcc ttccgtgccg acggtaaccg tgcctttatt gttgatgcgc
    55141 tcgattaaag aaccggaaac tgccgattgt gcaggcgcgg aagatgctcc gctgccgctt
    55201 tccgaaccgc cgcaggccgc caaaaccaat gcggcaatgc cgccgagtac gaattttttc
    55261 aacatcattc tctcctgtaa aaagtgtgca agtgcggcat tctaagtgaa attgcggcaa
    55321 acacaaagaa tacttttttt atatggttat tccaaatcgg aatggaaaag atatgccgaa
    55381 gccgccggaa gcggaaataa agggggcggg aaaggcgacg ggcggcacga aaccgaaaag
    55441 cggcatcagg tatgcaaacg gcggattcac gcacgccgtt ccggcaaaaa tccgcctgcc
    55501 gattcggtgc tataatccat ccgaaacaga tgacaccaaa aaggaacatc tcatgaacac
    55561 gccccaatcc gccatcattc ccgaccacgc ccaagccggc atctttatcg aagccgactt
    55621 cgccgccaac cgcctcaacg atattaaagc cgcctgccgc gcttcgctcg acgcgttatc
    55681 cgccttgaaa acccgctttc cggacgatat tttgggtctg accatcgcct tcggcagcaa
    55741 agcctgggca acattcggac atacggacga aggcagtgaa atcaaaccct tctccgaaat
    55801 gggcaacggg cttgcgccgt ccacgcagca cgatatgtcc atccacatcc aatctttccg
    55861 ccaaaacgcc gcctacgcgc ttgcccaatc cgttttgggc gcgttcggcg acagcatatg
    55921 cgtcgcgtcc gaagaacacg gtttgcgcct gtatcaggat cgcgggctgg acggtttcgt
    55981 cgacggcacg gaaaacccgc agggcgatga aaatgtccgc gaagtcgcca tcatccccga
    56041 aggaaaaccc gatgcgggcg gcagctatgt cctgctgcaa aaatacctgc acgatttgaa
    56101 aaaatgggat gccgtccccg tcgccgaaca ggaggcctcg gtcggacgcg gcaaggaaac
    56161 cgacgacgaa ttcggccacg atgtccgcct gcccgattcg cacctcggcc gcgtcaacct
    56221 gaaagaaaac ggagtcggcc tgaaaatcgt ccgccgcagc ctgcccttcg gcaaaatcag
    56281 cggcgaacac ggtttgatgt ttaccgcata ctgccgcacg ctgcacaata tcgaagcgca
    56341 attattgagt atgttcggcg acacggatgg caaaaccgac ctgctgctcc ggcacctctc
    56401 cgccgccgtt tcgggcggat actactacgc gccgtctgtc gaacgcctgc aaaacctcta
    56461 agccagacga tgccgtctga aaccattttt cagacggcat ttt
//
LOCUS       DAWEYF010000002        35960 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.002, whole genome shotgun sequence.
ACCESSION   DAWEYF010000002 DAWEYF010000000
VERSION     DAWEYF010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35960
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.002"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(127..1989)
                     /gene="hscA"
                     /locus_tag="WGN93_000056"
     CDS             complement(127..1989)
                     /gene="hscA"
                     /locus_tag="WGN93_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ0226036.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAKELQQI
                     RQGIADLQGRLKDGKAEDIRSAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            2160..3032
                     /gene="hpnD"
                     /locus_tag="WGN93_000057"
     CDS             2160..3032
                     /gene="hpnD"
                     /locus_tag="WGN93_000057"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ0226037.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVRARYGSFEELKLYCRRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            3111..4424
                     /locus_tag="WGN93_000058"
     CDS             3111..4424
                     /locus_tag="WGN93_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ0226038.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPYYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            4508..5227
                     /locus_tag="WGN93_000059"
     CDS             4508..5227
                     /locus_tag="WGN93_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ0226039.1"
                     /translation="MATLTDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGYPEPFAICFDLISAEEKEFEHFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            5392..6063
                     /locus_tag="WGN93_000060"
     CDS             5392..6063
                     /locus_tag="WGN93_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ0226040.1"
                     /translation="MKTVSTAVVLAAAAVSLPGCATESSRSLEVAKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            6073..6441
                     /locus_tag="WGN93_000061"
     CDS             6073..6441
                     /locus_tag="WGN93_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ0226041.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGDNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            6438..7085
                     /locus_tag="WGN93_000062"
     CDS             6438..7085
                     /locus_tag="WGN93_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ0226042.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            7374..8517
                     /locus_tag="WGN93_000063"
                     /pseudo
     CDS             7374..8517
                     /locus_tag="WGN93_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246189.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            complement(8627..8836)
                     /locus_tag="WGN93_000064"
     CDS             complement(8627..8836)
                     /locus_tag="WGN93_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226043.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(8833..9129)
                     /locus_tag="WGN93_000065"
     CDS             complement(8833..9129)
                     /locus_tag="WGN93_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ0226044.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRHHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            complement(9108..9713)
                     /locus_tag="WGN93_000066"
     CDS             complement(9108..9713)
                     /locus_tag="WGN93_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226045.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVIEKSARLA
                     VAAGAIIGKRQQLEDKLNAIETAPGLDALEKEIEEWTLNIG"
     gene            9793..10080
                     /locus_tag="WGN93_000067"
     CDS             9793..10080
                     /locus_tag="WGN93_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEZ0226046.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            10052..10354
                     /locus_tag="WGN93_000068"
     CDS             10052..10354
                     /locus_tag="WGN93_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEZ0226047.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(11076..13049)
                     /locus_tag="WGN93_000069"
     CDS             complement(11076..13049)
                     /locus_tag="WGN93_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ0226048.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGAAADNAHIVFGDNTLRLHGANNRISYNNHDIFHKANKPRFAEDIKGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPAGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRSDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQGLQDKADRDHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
     gene            complement(13060..13620)
                     /locus_tag="WGN93_000070"
     CDS             complement(13060..13620)
                     /locus_tag="WGN93_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ0226049.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPSSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            complement(13617..14672)
                     /locus_tag="WGN93_000071"
     CDS             complement(13617..14672)
                     /locus_tag="WGN93_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ0226050.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADELGAAANVRDGEAQLMAAPAGVSTECR
                     LTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLG
                     TVDIAITSADGVPSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGID
                     LDDAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANRAADTVN
                     RIEWFKAGAINVTEMPS"
     gene            complement(14686..15033)
                     /locus_tag="WGN93_000072"
     CDS             complement(14686..15033)
                     /locus_tag="WGN93_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HEZ0226051.1"
                     /translation="MDKELNPGTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(15133..15801)
                     /locus_tag="WGN93_000073"
     CDS             complement(15133..15801)
                     /locus_tag="WGN93_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEZ0226052.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDFEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(15798..16943)
                     /locus_tag="WGN93_000074"
     CDS             complement(15798..16943)
                     /locus_tag="WGN93_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ0226053.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(16933..18264)
                     /locus_tag="WGN93_000075"
     CDS             complement(16933..18264)
                     /locus_tag="WGN93_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HEZ0226054.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGMTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAVAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAAINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDMARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(18264..20435)
                     /locus_tag="WGN93_000076"
     CDS             complement(18264..20435)
                     /locus_tag="WGN93_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HEZ0226055.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPDTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALGWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAAIQQQTAAYQAALAQDTAAVTTGLAQVQ
                     SAMASASQTINTNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            20590..21172
                     /locus_tag="WGN93_000077"
                     /pseudo
     CDS             20590..21172
                     /locus_tag="WGN93_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249360.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(21216..21485)
                     /locus_tag="WGN93_000078"
     CDS             complement(21216..21485)
                     /locus_tag="WGN93_000078"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226056.1"
                     /translation="MPKTVRRYGEPRRAVGGGAVKRSYLTAHKSYRQAVILMAKAGIG
                     ADAVRDMCHAELSAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(21425..21790)
                     /locus_tag="WGN93_000079"
     CDS             complement(21425..21790)
                     /locus_tag="WGN93_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226057.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     CLKPSAATASPDAPSAAEQ"
     gene            complement(21794..22171)
                     /locus_tag="WGN93_000080"
     CDS             complement(21794..22171)
                     /locus_tag="WGN93_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ0226058.1"
                     /translation="MSDATYTGAVIMEVNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEGRRTSYLDCFTVDTS
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(22236..23645)
                     /locus_tag="WGN93_000081"
     CDS             complement(22236..23645)
                     /locus_tag="WGN93_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEZ0226059.1"
                     /translation="MPHIDFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVAGRLKTAITAADVTVTAS
                     GSGAAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANVFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVFNAIEQRGCIGVLGMSAALSTATTATGKINDGRI
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPWFAECNNA
                     LYNGLTPLTAVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(23648..23845)
                     /locus_tag="WGN93_000082"
     CDS             complement(23648..23845)
                     /locus_tag="WGN93_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HEZ0226060.1"
                     /translation="MSKIKVTAADGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAAPNTKTRNTKGE"
     gene            complement(23842..24492)
                     /locus_tag="WGN93_000083"
     CDS             complement(23842..24492)
                     /locus_tag="WGN93_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HEZ0226061.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPASTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPERTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(24482..24904)
                     /locus_tag="WGN93_000084"
     CDS             complement(24482..24904)
                     /locus_tag="WGN93_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HEZ0226062.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFRRPFEDLPPILVRLCCDIARYRLTAAQGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFVNGKNKVFGRDH"
     gene            complement(24904..25302)
                     /locus_tag="WGN93_000085"
     CDS             complement(24904..25302)
                     /locus_tag="WGN93_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226063.1"
                     /translation="MAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARNDVEMLTT
                     ALEKAEDDKKALSAELAELKVQHTQRAADALADSRDVMLVSTGADGKEFWRGGLLFDG
                     GWREVKRAEVGEAVWKAICAEPMLQRKAVE"
     gene            complement(25367..26275)
                     /locus_tag="WGN93_000086"
     CDS             complement(25367..26275)
                     /locus_tag="WGN93_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HEZ0226064.1"
                     /translation="MDKSAILTAITAAFRKEFQTGLESVKPDYTAVAMTIPSNTATNT
                     YAWLGKFPQMREWVGSRQIEKMNKQAMSLDNKKFEATVGVARTDIEDDQVGMYRPMMA
                     AMGESAAALPDTLVWGLLKKGKTTVGYDGQYFFDTDHPVYEKSDGTGQNTPHSNLTTG
                     TDNDAPTFYVVDDTKTLKPLIFQNRTDSEFETKFDPSKSDRVFMEDEYLYGSRRRCNA
                     GFGLWQLMHMAEKTALTRENLAAIIVKMQKIKADGGYVLNVKPSLLVVPPELEDKARE
                     LLEADKINGTTNTFKGRLKLHVCVHL"
     gene            complement(26275..27336)
                     /locus_tag="WGN93_000087"
     CDS             complement(26275..27336)
                     /locus_tag="WGN93_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226065.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAEGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            complement(27567..27983)
                     /locus_tag="WGN93_000088"
     CDS             complement(27567..27983)
                     /locus_tag="WGN93_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEZ0226066.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            complement(28111..29436)
                     /locus_tag="WGN93_000089"
     CDS             complement(28111..29436)
                     /locus_tag="WGN93_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEZ0226067.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDTYLTLAYKAPDGSLYTTDRGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQSFGTDLYAMLPDLIHEPEYIFYDKSRGKESFVLLGK
                     PLEGNEKYRLMAVLKYLPQYDSIFLDSFRRADEKEIVKSKKRYEMKKGY"
     gene            complement(29423..30991)
                     /locus_tag="WGN93_000090"
     CDS             complement(29423..30991)
                     /locus_tag="WGN93_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HEZ0226068.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            complement(30991..32613)
                     /gene="terL"
                     /locus_tag="WGN93_000091"
     CDS             complement(30991..32613)
                     /gene="terL"
                     /locus_tag="WGN93_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ0226069.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTILDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWHGIKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYLANKDEMERGAQTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRETG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFGNEIKSKWSR"
     gene            complement(32632..33441)
                     /gene="dcm"
                     /locus_tag="WGN93_000092"
     CDS             complement(32632..33441)
                     /gene="dcm"
                     /locus_tag="WGN93_000092"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ0226070.1"
                     /translation="MDKQKPTVGSLFAGIGGFDLGFEQAGFDTAWQVEINPVPRAVLT
                     DRFPYAKQFEDVRTVLSELWPVDVIIGGFPCQDVSIAGKRKGLAGERTGLFYDAMRIV
                     DQLKPRWIVLENVTGLLNSNNGEDFQTVIKSLAECGYVGYWRVLNAAYFGVPTARRRV
                     FLVAGLGEYPPPMSLWLTPAQLESYLARLTRAGCKSRMVLCLEGFPMEPLTAQAQIFS
                     LRPTDGVRWLSGKERLTMMGFSSEWMRPTLRRLKLRETPSVRRSHAGLPKN"
     gene            complement(33434..33940)
                     /locus_tag="WGN93_000093"
     CDS             complement(33434..33940)
                     /locus_tag="WGN93_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ0226071.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRASYTLADGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     VEVEKKFG"
     gene            complement(33943..34140)
                     /locus_tag="WGN93_000094"
     CDS             complement(33943..34140)
                     /locus_tag="WGN93_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226072.1"
                     /translation="MSAPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(34137..34403)
                     /locus_tag="WGN93_000095"
     CDS             complement(34137..34403)
                     /locus_tag="WGN93_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226073.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS"
     gene            complement(34415..34753)
                     /locus_tag="WGN93_000096"
     CDS             complement(34415..34753)
                     /locus_tag="WGN93_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226074.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYNTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(34750..34968)
                     /locus_tag="WGN93_000097"
     CDS             complement(34750..34968)
                     /locus_tag="WGN93_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226075.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            34981..35151
                     /locus_tag="WGN93_000098"
     CDS             34981..35151
                     /locus_tag="WGN93_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ0226076.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(35196..35501)
                     /locus_tag="WGN93_000099"
     CDS             complement(35196..35501)
                     /locus_tag="WGN93_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226077.1"
                     /translation="MSLLKTVKMQAAVVLTALALTACSSTSAPSATEIKVVEKAVLPT
                     PPAALMVAPVRPNPPKDGKTVTLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(35398..35817)
                     /locus_tag="WGN93_000100"
     CDS             complement(35398..35817)
                     /locus_tag="WGN93_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226078.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQAVID
                     KMEKDKAQALLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGSHGLQLYKRALGYGN"
     gene            complement(35789..>35960)
                     /locus_tag="WGN93_000101"
     CDS             complement(35789..>35960)
                     /locus_tag="WGN93_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226079.1"
                     /translation="NVACAAGTVKFVMLPDPSAEIWAVYLGIVGGYAVARSLVSVKRQ
                     EVENESRETAGE"
BASE COUNT         7461 a        10224 c         9525 g         8750 t
ORIGIN      
        1 acgcccttga tgacggtttt catcgaatag acaatgcctg acttttccat atcgatgttt
       61 ttcaagtgtt ttcgagcctt cagacggcat caggttatat ctatgccgtc tgaaaccgtt
      121 taagtatcaa atattatcga cactctggcc tgtcaatgcg cgttggatat tgcggttcat
      181 gcgtttggcg gcgaagttgt cggtgctgcg gctgagtttg gcgacggcgg agcggatgtc
      241 ttcggctttt ccgtctttca gacggccttg caaatcggcg atgccttgcc ggatctgttg
      301 caattctttg gcatccagta aatcgctgtc caactcgagg gcggcgttga cggcatcggt
      361 caggctttcg gcttcgacta cggcttcggc gcgggcgcgt gccgccatat cttcggcggc
      421 gttgtccata ctgtctttaa gcattcgggt aatcgcgccg tcgtccaagc cgtaggaagg
      481 tttgacttcg atttgcgcct gtacgccggt gctttgttct tgggcggaaa cggacagcag
      541 cccgtccgca tcgatttgga aggttacgcg gatacgcgcc gcacccgccg ccatcggtgg
      601 aatgccgcgc agggtgaatt tggcaaggct gcggcagtca gaaacgagct cgcgctcgcc
      661 ttgcacgacg tgtatcgtca tcgcggtttg accgtctttg aaggtggtaa agtcctgcgc
      721 gcgcgcggtg gggatggtgg aattgcgcgg gatgattttt tccgccaagc cgccgtaggt
      781 ttccaaaccg agcgacaaag gtgtaacgtc cagcagcagc cattcgccgt cggttttgtt
      841 gcctgcgagg acgtttgcct gtatggcggc gccgagcgcg acgacttcgt cgggattgag
      901 gttgttcagc ggggtttgtc cgaagaaggt ggcgactgcc tgttggacgt gcagcatacg
      961 ggtcgaaccg ccgaccataa tcacgccttt gacttcgttt ttaccgacac cggcatcttt
     1021 caacgcctgt gtgaccggtt cgagcgtttt catcaccaaa tgctgcgtca ggttgtggaa
     1081 ctcggcgcga ctgatgcttg tgtcgattgc catgccgtct gaaagcgtcg cctgaatgcg
     1141 cgcttcggtt tgcgtggtta attgttcttt ggcggcgcgg acgagcgaga gcaggagttg
     1201 gctgtcttgt tcgttgagtt gggagagtcc gttttgttcg agcaggcggc agaacaggcg
     1261 gtggtcgaaa tcgtcgccgc ccaacgcgct gttgccgccg gtggctttga cttcaaacag
     1321 tcctttggtc agttgcaata cggatacgtc gaatgtgccg ccccctaagt cgtacacgac
     1381 aaacgtgcct tccgaggcgt tgtccagccc gtaggcgatt gcggcagcgg tgggttcgtt
     1441 gagcaggcgc aatacgttca aacccgccag acgcgcggca tctttggtgg cttggcgttg
     1501 ggcatcatcg aaataggcag ggacggtaat caccacgccg accaaatcgc cgcccaaggt
     1561 ttcttcggcg cgcgatttaa gggttttgag gatttccgcc gacacttcga caggcgtttt
     1621 caccccctgc cgcgtatgca gttcgataac gcgttgattg tcgccgaaac ggtaaggcag
     1681 gtaatgcgta ttttgatgca gatcggcaag cgtccgcccg ataaggcgtt tggcggagct
     1741 gacggtgttc agcgggtcgg ttttttgggc ggacagggcg gttttgccga cttcaatgcc
     1801 gccgttttcc agatagcgga cgacggaagg cagggtaacg cgcccttcgg catcgggcag
     1861 acaggcggca ctgccgctgc ggacggtggc gaccaagctg ttggtcgtac ccaaatcgat
     1921 gcctgccgcc aaacggtgcc ggtgcggggc ggcggacata cccggttctg aaatctgcaa
     1981 aagagccata aattctgcct gtcggtgcgg tgtgtaaagg aaggaaagcg gcattttaac
     2041 agaatttgcg ccgatagttg agcaaaccgc taaggattgg gtcgtgccgc cgaaattgcc
     2101 ctctaccgcc aaatgccgat aaaatccgcc tttcccgccc atcattagga atataaatcg
     2161 tgaaaggact cgactattgc cgccaaaaag cagaagaaag ccgctccagt tttttgtcgg
     2221 gcttccgttt cctgactcag gaaaaacggg atgcggtaac ggttttatat gctttttgcc
     2281 gcgaattgga cgatgtggtt gacgaatgtt ccaaccccga tgttgcacag gcgacattga
     2341 actggtggcg cggcgatttg gacaaggtat tcggcggcgc gatgccggaa caccccgtca
     2401 atcaggcctt gcggcaggtt aaggaaacct tcaagctgcc gaaatatgaa ctggaagcct
     2461 taatcgacgg gatgcagatg gatttggttc gggcgcgtta cggcagtttt gaagaattga
     2521 aactgtactg ccgccgtgtt gcaggtgtag tcggctgcct gattgcgcgg attttggggt
     2581 tttcagacgg caaaacgctg gaatacgccg acaagatggg acttgcgctg caactgacca
     2641 acatcatccg cgatgtcggc gaagacgcgc gcaggggacg gatttacctg ccgatggagg
     2701 aaatgcagcg gtttgatgtc cccgcaagcg tgattttgca atgcagcccg acgggcaatt
     2761 ttgccgaatt gatggcgttc caaatcaaac gcgcccgtga aacctaccgc gaagccgtat
     2821 cgctgctgcc ggctgccgat aaaaaagccc aaaaagtcgg actggttatg gcggcggttt
     2881 attacgagct attgaacgaa atcgaccggg acggcgcgca aaacgtcctc aaatacaaaa
     2941 tcgccctccc ttcgccgcgc aaaaaacgca ttgccctgaa aacctggtta ttcggattca
     3001 aaccgcgccc cggcacgccg gaacgggcat aaggcgcata ccgcccgccc ttcaggaaaa
     3061 cccaaccccc gccgccccga aaaacggggt ttcaaccatt ggaggaataa atgatgaaca
     3121 cgccgcatcc gcgcccgaaa atcgccgtca tcggcgcagg ctgggcagga ctgtccgccg
     3181 ccgtcacctt ggcgcggcac gccgacgtta ccctgtttga agccggccgg caggcgggcg
     3241 gcagggcgcg cacactggcc ggaaataccg acggtttcgg ttttttggac aacgggcagc
     3301 acattttgct cggcgcatac cggggcgtgt tgcgcctgat gaaaaccatc ggttcggatc
     3361 cccgtgccgc ctttttgcgc gtaccgctgc actggcatat gcacggcggt ttgcagttcc
     3421 gcgccctccc cctgcccgcg ccgctgcata ttttgggcgg cgtgctgctt gcccggcgtg
     3481 caccgactgc attcaaagcc aaactgcttg ccgatatgtc cgatttgcag aagtccgcac
     3541 gcctcggaca gcccgacacg acagttgcac aatggctgaa acagcggaac gtgccgcgtg
     3601 ccgccgtgat gcagttttgg cagccgctgg tgtggggtgc gctcaacacg cctttggaaa
     3661 ccgcaagcct gcgcgtgttg tgcaacgttt tgtccgacgg cgtgctgacg aaaaaatccg
     3721 gcagcgacta tctcctaccc aagcaggatt tgggcgcaat cgtcgccgaa cccgccttgg
     3781 cggagcttca acggctcggc gcggacatcc gcctcgaaac gcgcgtatgc cgtctgaacc
     3841 ccctcccgga cgggaaagtg ctcgtcaacg gcgaagcttt cgatgccgcc gtccccgcca
     3901 ccgcgcccta ccacgccgcc gcgctcctgc ccgaaggcac gcccgaacac gttcagacgg
     3961 catatcaaaa ccttcgctat cacgccatca ccaccgtcta tctgcgctac gccgaacccg
     4021 tccgcctgcc cgccccgctg accggccttg ccgacggcac ggtgcaatgg ctgctttgcc
     4081 ggggcaggct cggactgcct gaaaacgaag tgtccgccgt catcagcgtt tccgaccgcg
     4141 tcggcgcgtt tgcaaaccgg gcgtgggcgg acaaagccca cgccgacctc aaacgcatcc
     4201 ttccgcattt gggcgaaccc gaagccgtgc gcgtcatcac cgaaaaacgc gccacaaccg
     4261 cagccgatgc cccaccaccg gatttgtcgt ggctgcaccg gcaccgcatc ttccccgccg
     4321 gcgactacct ccacccatac taccccgcca cgctcgaagc cgccgtacaa tcaggtttcg
     4381 cttccgcgga agcctgcctg caaagcctga acgatgccgt ctgaaaacgc cggccggcat
     4441 caggacgctt tacaaggtgc ggcaaaacgc taaaataccc ccgaccgacc accaaaaagg
     4501 aaaaagtatg gcgacactga ccgacaaaac catcttagtt accggcgcat cgcaagggct
     4561 gggcgaacag gttgccaaag cctatgcggc agcaggcgcg actgtgattt tggttgcccg
     4621 tcatcagaaa aaactggaaa aagtgtatga cgcgattgtc gaagccggat accccgaacc
     4681 attcgccatc tgctttgacc ttattagcgc ggaagaaaaa gaatttgaac atttcgccgc
     4741 caccattgcc gaagccacgc aaggcaaact ggacggcatc gtccactgcg ccggctattt
     4801 ttacgccctc tcgccgctgg atttccaaac cgtcgccgaa tgggtcaacc aataccgcat
     4861 caacaccgtc gcacctatgg ggctgacccg cgccctgttc ccgctgctga agcagtcgcc
     4921 cgacgcgtcc gtcatcttcg tcggcgaaag ccacggcgaa acacccaaag cctactgggg
     4981 cggcttcggc gcgtccaaag ccgcgttgaa ctacctgtgc aaagtcgccg ccgacgaatg
     5041 ggaacgcttc ggcaacctgc gcgccaacgt cctcgtcccc ggccccatca attccccgca
     5101 acgcatcaaa tcccatccgg gcgaagccaa aagcgaacgc aaaagctacg gggacgtgct
     5161 gcccgcattt gtctggtggg caagtgccga aagcaaaggg cggagtggcg aaatcgttta
     5221 cctctaaatc cggaaaaggc aggcatcccg cccgcgccgc gattccgttt gaaaaatatc
     5281 cgtaccttcc gcgcgcatcc gtcccgcaca gacaaacacc ttgacttaaa tttacataag
     5341 gacaataatg ataactcgtt atttccttaa cttgacctta gggtaaattt tatgaaaacc
     5401 gtttccaccg ccgttgtcct tgccgccgct gccgtttcac tgcccggctg tgcgaccgaa
     5461 tcctcacgca gtctcgaggt agcaaaagtc gcctcctaca atacgcaata tcacggtgtt
     5521 cgtaccccga tttccgtcgg aacattcgac aaccgctcca gcttccaaaa aggcattttc
     5581 tccgacgggg aagaccgttt gggcagccag gcaaaaacca ttctggtaac gcacctgcaa
     5641 cagaccaacc gcttcaacgt actgaaccgc accaatttga acgcattaaa acaggaatcc
     5701 ggcatttccg gcaaagcgca taacctgaaa ggcgcagatt atgtcgttac cggcgatgta
     5761 accgaattcg gacgcagaga tgtcggcgat catcagctct tcggcatttt gggtcgcggc
     5821 aaatcgcaaa tcgcctatgc aaaagtggct ctgaatatcg tcaacgtcaa tacttccgaa
     5881 atcgtctatt ccgcacaggg cgcgggcgaa tacgcacttt ccaaccgtga aatcatcggt
     5941 ttcggcggca cttccggcta cgatgcgact ttgaacggca aagttttaga cttggcaatc
     6001 cgcgaagccg tcaacagcct ggttcaggct gttgacaacg gcgcatggca acccaaccgt
     6061 taaggagaaa tgatgaatcc gaaaaccttg agccgtttgt cgctgtgtgc ggcggtcttg
     6121 gctctgaccg cctgcggcga caacgggcaa aaatccctgt attattacgg cggctatccc
     6181 gataccgtct atgaaggttt gaaaaacgac gacacttcgt tgggcaagca gaccgaaaag
     6241 atggaaaaat actttgtgga agccggcaac aaaaaaatga atgccgcccc gggtgcgcac
     6301 gcccatctgg gactgctgct ttcccgttcg ggagacaaag agggcgcgtt ccgccagttt
     6361 gaagaagaga aaaggctgtt tcccgaatcg ggcgtattta tggacttcct gatgaaaacc
     6421 ggtaaaggag gcaagcgatg aaacctttga ttttagggct tgccgccgtg ttggcgctgt
     6481 ctgcctgcca agttcaaaaa gctcccgatt tcgactacac gtcattcaag gaaagcaaac
     6541 cggcttcaat tttggtggtt ccgccgctga acgaatcgcc cgatgtcaac ggaacatggg
     6601 gtgtactggc ttcgaccgcc gcgccgcttt ccgaagccgg ctattacgtc ttccccgccg
     6661 cagtcgtgga ggaaaccttc aaacaaaacg gcttgaccaa tgccgccgat attcacgccg
     6721 tccggccgga aaaactgcat cagattttcg gcaatgatgc ggttttgtac attacggtta
     6781 ccgaatacgg cacttcatat caaattttag acagcgtgac gaccgtatcc gccaaagcac
     6841 ggctggtcga ttcccgcaac ggaaaagagt tgtggtcggg ttcggccagc atccgcgaag
     6901 gcagcaacaa cagcaacagc ggcctgttgg gggctttggt cagcgcagtg gtcaatcaga
     6961 ttgccaacag cctgaccgac cgcggttatc aggtttccaa aaccgccgca tacaacctgc
     7021 tgtcgcccta ttctcacaac ggcatcttga aaggtccgag attcgtcgaa gagcagccca
     7081 aataagcata tgccgtctga acctctccga gcttcagacg gcatatgcga atcttgatac
     7141 ttgcaagccg caccgcccaa aatcgggcgg ccggtttcaa tatccgaaca aggttcgggt
     7201 tctgtatttt gcagaacccg aaccttttat tcaaatttaa acttaattcc ggcgtggttg
     7261 tatggtaaat taacacgcaa tatgccctga cctgcaaaac ttccccaaac ttcatcaaaa
     7321 aatcaactgt acccgtcttt ttcagacggc attgataccg taagaaattt cccatgcaga
     7381 aatggcaaac cgagctttat tccacaccgc tttggctttg tctgacactg aaaagcgcgg
     7441 tcaaagtctt gctgctgatt acggcgatga ttacgctggt gttaaccgaa atgcggctga
     7501 atgtgttgag tacctttatg tccaaagggc tttacgactc gatgcaggat ttgaaatgct
     7561 tcggcatttt ggatgtttgc tgcaatgaac gcgggcgtgg tgctgatacg ggcgtttaac
     7621 aacgtcgtca acgacttcct cgatcaaggc ttggcgatta aatggtcgga gcggctcaac
     7681 gaagtgctga cagcacgctg gcttgccgac aaaaactact accgcctgca aatgcgccgc
     7741 cacgcgccag acaacatcga ccagcgtatc caacaggacg cgcaggaatt tatcgcttcg
     7801 accatcgaat ttgtgcgcgg catggtcaat tcggtcgtta cttctctgga atttgccgtt
     7861 gttttgcggg gcttggctgg catcctgacc gtgttcggct tcgacattcc gcacggcatc
     7921 gtttggtttg tctatatatt tgtgattttg gcgaccttta tcgccatgtg gataggcaac
     7981 cctttgattc gttacaatta tgaaaacgaa aaactcaacg gcgactaccg ttattccctc
     8041 atccgcgtgc gcgaccacgc cgaaagcgtg gcgttttaca acggcgaaaa acatgaatac
     8101 gaccagcttt ccgaccgctt taaagccatt atccgcaacc gttggcgcat tgcgcggcaa
     8161 agcgtctgct taagcggctt taacgatatg ttcaccaacg gcatcaaact cttcccgatt
     8221 attttgcaag ctccgcgcct gtttgccgga caaatcaaaa tcggcgacat ccagcaaacc
     8281 gtccaagcct tcgcgcgact gcaaaacgcg ctttctttct ttcgaatgtt ctacaacaaa
     8341 ttcaccgcct accgcgcccg attggagcgt ctgtacggct ttttgctgag taccgaagaa
     8401 caacacagcg cgcggcaacc cgagattagc gaagtttcag acggcattgc actggaatgt
     8461 aaggcggcgg cagcttttgc acgaattggc ggcagctttt gcaccgccga agcgtaggaa
     8521 attgtattag cttttgcaca aatttatccc cgtttaatgg tctgttaaac ggggattatc
     8581 ttatgccttt aaaagtagta cgctacttgc ggtcagaact tataaatcag gtggtcgtcg
     8641 tagcttgaat tgctgttgat gtgctgctca cagtcaaggt ttggctgcct gcaaaacgct
     8701 cccatccggt caggcgcagt tctgccacga ggtcaagata agtaggcagt tcgctgcggg
     8761 tgccggagaa gaagacaaat ggcggccgca ccattgccat caggcgcaga aactctacca
     8821 tgccgaagta gttcatcgcg tccccttttc cccggcggcg cggctttggt tgaaccgcgc
     8881 gtcgtgctgc ctgcctttca gttcgctgat atacgcctgc cggcagtggt ggcggtcgaa
     8941 aaatacgccg ttgatcaggg tgtataaaac cttccagcgg gttttgggct tttgggcgag
     9001 ccgcgcgccg cgataggtgc ggcttgagag ggtttcgtcc gccgcgccgc cggttagggc
     9061 gttgaacagt tggtcgatgg ctaccaacag gtggtaaacg tattttttca gccgatgttt
     9121 agcgtccatt cttcgatttc cttttccagc gcgtccaatc ctggcgcggt ttcgatggcg
     9181 ttcaatttgt cttcgagctg ctgacgcttt ccgataatcg cgccggcggc aacagccagg
     9241 cgggcggatt tttcgataac tttttcaatc aaaacgtcca attccacgcc ccttgcggcg
     9301 gcgatttgcg ccagcatcgg ggtcggggcg ttgttgtccg cctgccgcgc gagggcttct
     9361 ttttcctgcc tgtaaaagct gtcgatttcc acttggggat agcccgccaa gaggctgttt
     9421 ttgagttcgt ccgcctttgc cgcgaggcgg aatgccgtgg cggttttttg ttcggcgaaa
     9481 cgggcggcgg cagcggcttc gccgatttcc catttcttgc cgtcccattc gtggtattcg
     9541 gacgggcgcg gcggggttaa aacggggcgg ccgtcggaat ctgcggcaat ctgcccgccc
     9601 tgcgcctgtc ctgccaaaag ggcggcgtat tcttcggcgc ggacggcaac cgcgccttcg
     9661 gggatgctgc ccaaggtgtc gtcgtaaaag ccgtttttga aatagatggt catttcgggg
     9721 tttccttttt tgtatttaca ttttggtttt ttgccgctta taatgtaacg acaaaatacg
     9781 ctgcaagctg caatgaagat tgaatttgac tccgaaaaaa atcaacgcaa tatcgaagag
     9841 cggaatttgc cctttgaatc agtcgggcaa atacgctgga caacggccgt tattgtgccc
     9901 gatgtctgct ttgattaccc cgaaccgcgt tatgttgccg ctgcttatct aggcgatacg
     9961 caacgcctgc acattgtctg ttttacgccg ataaaagacg gcatccgtgt catcagtttt
    10021 cgcaaagcga ataaaagaga ggttaaaaaa tatgcaacgt caatccttaa caaacgctga
    10081 cggcgaagtg cgggaacttg ccgccgaaga ttttgcgctt gcccgcccca ttgccgaagc
    10141 cctgcccgaa gacttggcac aggtgctttt ttcccatcaa aaacaattgg aagaaaaggg
    10201 cgtaatgcaa aaacgaaaca caggcaaaac cccgaaacaa ctcgttacca tacgcctgtc
    10261 cgccgatgtg gtcgaaaaat tccgcgccgg cggcaagggc tggcagacgc gcatcaacga
    10321 ggttttgcgc caatatgtcg cccaattgaa ataacggggg cggccgctgc ttatcgggcg
    10381 cgcccgacta tcctttcccg cgcggtttcg gccgtgcggt tttttgttgc cggtgccgtc
    10441 cgaagggggc agcggctttt tgcgcggtca ttcccgcctt tcgttattcc cgccactttc
    10501 cgtcattccc gcgaaggcgg gaatcccgaa acccctgccg ccgtcattcc cgcgcaggcg
    10561 ggaatccagt ccgttcggtt tcagccgttt ccgatagatt cctgccgcgt ttggggtctg
    10621 gattcccgcc tgcgcgggaa tgacggcggc gggggtttct gttttttccg atagattcct
    10681 gttgcgtcgg ggtctggatt cccgctttcg cgggaatgac ggcggcgggg gtttctgttt
    10741 tttccgatag attcctgccg cgtttggggt ctagattccc gctttcgcgg gaatgacggt
    10801 ggcgggggtt tctgtttttt ccgatagatt cctgccgcgt ttaggggctg gattcccgct
    10861 ttcgcgggaa tgacgaaagc ggcgggaatg acgaagagtg gcaggattgg cggggcatag
    10921 gtttcggggg attggcggcg cggccggttt cggtcggatt gcttggatcg gcgggctgaa
    10981 gcccatctct acagcccatc tctacagccc atctctacag cccatctcta cagcccatct
    11041 ctacagcccg tctctacagc catctctaca gcccgctagt cttgcagtgc ctcgagcaag
    11101 ccgtctcggc ggcggcggtt tcggggtccg gttgatgttc ttccactctc tctttgcggt
    11161 tcttcgttgg tttcaggtat ttcggggcct atcggggagc tggcggcgtt tcccgaggcg
    11221 gctttgccga tggccatcca gtcgcaactg ccttcgtacc agttggtaat aatggcggcg
    11281 gcgtggtttt ttgcgcggat aaacagccag ttgtgttgcc ttcgatcgcc ggtaacgcgt
    11341 cccgaatggc gttcggatac gaagcatttg acgttgccgt cggcaaaggc gacggggaag
    11401 acgacttcgt tttcgatggg gccgccgctt cttgtaaacc tgtaactgcc ggtctgtatc
    11461 attgtgccgt cggggaatct gacaatatcc acgccgccga tggtttggcg tgtgaattgc
    11521 gcggcaacgg cggtgctgat tttttcgtcc agcccttgga tttgggcggc ggtgtgggtg
    11581 tggtcgcggt cggctttgtc ttgcaaacct tgcgccagcg tgcccgcgtc cagcgcgcct
    11641 gcgttgatgg tttcgccgtg ggactttatc caaaacacgg cttcgcccaa ggtgtcggcg
    11701 gctttgatgc acagttttaa aaccagggct ttggggcggt tttcgtcgcc gcccgttgcc
    11761 attttgctgt ccgagcgcgg ggttaaaaag ccgttgtcgt ttaaatcgcc gtccgtccaa
    11821 gtcgatacga gcgcgcttct ctgcctttcg ttgtggtctt cgtaaccgac ggctgccgtg
    11881 tctgtgtggt ttgtccagtg tgaaaatact ttgtggacgt gccgtttgat ttcgtcttcc
    11941 tgcttcgttc cgactgccaa gctgttgcct gcgttgcgga taaagcggtc ttccgcctgc
    12001 gggacgtttt ggatgctgcc gtattttccg gtcagcagac ggtacagctc gggataagcg
    12061 gtttcggtta cgcgcgtgcg gatgtcgtca aacgccagcc agccggtcgg gatttggtcg
    12121 gacggaaacc acgcggtgat gccgatgtcg gtacggctca aatcgggcag gcggttgctg
    12181 ttgcccaagg cgcggtagag gtcggggaag gtgttttgcg caaaggtcgt gccgttggct
    12241 ttgagatagc ctgcggggtt ttgtacggct ttgggaaagg atacgatcgc gccggcgggg
    12301 atgccgtccg aattgagttt tttccatgcg gaccagttgt cgtttgcgct gctcgtttgg
    12361 tggcgttcgt acacgtcgga cgtgtaggcg ggataaccca actgcctgca ccagccgggt
    12421 tgcgttccgg cgatgacttg gatatggcag gcggtgtttt caacgggcag gttggagctg
    12481 ccgaccgccg tcggcaggga atagatgccg tctgttttga gggtgttcaa atcgccccgg
    12541 aatgtttcga ctttgaaatt gccgatgccg tatccggaca gtgtgttcgg tttgcctttg
    12601 atgtcttcgg caaaacgcgg tttgttggct ttgtggaaga tgtcgtggtt gttgtaggaa
    12661 atgcggttgt ttgcgccgtg caggcggagg gtgttgtcgc cgaagacgat gtgggcgttg
    12721 tcggcagccg cgccgatgta ggctttgtgg ccgccgttcc agttcgtctg gttggcggat
    12781 aaatggatgc cgctttggaa ttgggtttgg gcagtaaagg ttttttggcc ggtgatggtt
    12841 tggtcgccgg tggtaactac agccagccta tttagtgctg ccagtaattg attaggctgc
    12901 gacttatccg gctggatacc ggccgcagtc agcacggcca gcagctcgga ttgcacttgg
    12961 ttgagccacc acgcgggcag gatggtgccc aattcggaca cgccgtcgcc gtcgtggaag
    13021 gtcttgtcgg gggtttcgat ggggtgcatg gtttagtcct tatcggtagg taaatcggat
    13081 agcggtgtgg gcgggcttga ggcggttgaa caggctctcg atcacggcat cgctgtaatc
    13141 ggtcagcctg tcgcccgccg ccgagatacc ggcgcggaat cgggtaatgc ggttgttgcc
    13201 gccgcgcacg ttaacgtgcc acacccacat gatttcctgc ggcgcaagac ggtcgccggc
    13261 gcggtttaca ccggcgcgga acggctgcgg ttcgtcgatt tggatttgat agcccgccgc
    13321 ctcggccaaa cgcacaaaat aaggaatact caagccgcct gtttcgttta gcttggccat
    13381 gacggccaac acacggcgct ggcggttttt gcccgtaccg tccaaaccta atacgcgctc
    13441 ccaatcggcc agcatttggc cggcgctgct cgggtcgacg gcatcggcaa cgctttgagc
    13501 cgattccgcc accgcatcca gcgctgcgcc gtctatttct gcctgcgccc gcacacgcgg
    13561 ggcattgcgg gcatacgaca cggggggcaa cagaccccgc aagatgtctt gatagctcat
    13621 gacggcatct ccgttacatt aatcgcgccc gctttaaacc actcgatgcg gttaaccgta
    13681 tcggcggcac ggttggccgt cggcgcagtc agacggcggt cgatcacacc atccacattg
    13741 ctgatagccg cctcgatttg cgacacagtc agaccgtcgc cggggatcag ggtgtcgaaa
    13801 tattctttta gagccgtccg tatgcggcgc ttggcatcgt ccaagtcgat gccgtcgagc
    13861 ttgacttgca cggtaacagg caccgccgtt acggttggct tgagtaccag cgcatttttt
    13921 gccgttaccg ggcgcatctc gtcgatataa gcctgtacgc ggcgcacagt ttcttccgac
    13981 ggcacaccgt cggcggaggt aatggcaata tccaccgtac ccaagccgcg gcgcagcgga
    14041 taaacatatg cgctggttac gccgtcaaca ctcaacgccc agtttttata gtcgtaacgg
    14101 ttgccgcctg cgggcggtcg gcggatgatt tccaacagac gcgccagcag tgaggcatcg
    14161 ctttctcggt cggtgccgcc ttgtacggta aggcggcatt cggtggacac accggcgggg
    14221 gcggccatca gttgcgcctc gccgtcgcgc acattggcgg ccgcgcccag ctcgtcggcg
    14281 attgccggta tttccgccgt gccgccgctg ccgataacgg cgcgggcggt agtgcggtaa
    14341 aaacgctggc cgatacgcac ttgcaggccg tctgaaagca tggattgcgc aataccgctt
    14401 acggtcagcg tgccgctggc cgtggtagga ttgcggcggc gcaagccgcg catggaggca
    14461 tgccgctcca aatactcgcg gtcggcggta tcagggaaaa tctgccgcac aatccagctt
    14521 tgatgcgcat attgcccttc ggcgcagctg gccaaacggc tggcgtgcac ataatggtcg
    14581 ctgtcggggc tgatatcggc atccggccac aggcttttgg tatcgcgcag gatacgctcg
    14641 cggatttgct caaatgtcgg cgtttcaaac acgtttaaaa cctctttaaa tcacgggcac
    14701 ttcgtggcgg taatcaaacc cgcccgccgc cgtatccacc cggatatgca ggatcaggcg
    14761 gccgtcgtgc ggctgctctg cgcgcacggt aatcttgtcg gcacgcccgc tcttaacaat
    14821 cggttgcagt gcctcatcgg catattgctc ggccaacagg ctgacccgtt gcaggtcttt
    14881 ttcgcgctgc aacaaatgca gcagcgagcc gagcgtttta tccgcccacc agctgcccaa
    14941 cggtgtcatc aaacggatat acacggcatt ttgcagcgta tcgacggtgc ggccggtata
    15001 gtcgccggtg ccggggttta gctctttgtc catgttggca ttttgccgtt ttcagacggc
    15061 ctcacggagt acacgggctt caatcccgca cgcacaaaaa agcagcccga aggctgccaa
    15121 aggtctgctt gtctatgccg gttccgccgg taaggttttg ccgccgatgc tgtcggtatg
    15181 cgggtgctgg cgcaacgata tattgccggc caccacgtcg ccgtcggtgt taaagctgcc
    15241 gcccgtttgg ttaacatcgc cgctaaaggt ggctccgtcg ccgccctcga cggccatgcc
    15301 gccgttgccg ttgatttggc cttgcgccgt caacactgca ctggtctcca ccaacggagc
    15361 gttaaatttg gcatccgtgg ccgcattaac ctcgtattgt ttgcagttaa cccggtacac
    15421 gtcgcaatcg gcctcaatga ttttgccttg cttaatcacg atttttgcac cctcatgatt
    15481 aaaaatcgcc gtctcgccgg gcttaaggtt tttgatgcgg tagctgccgt gctggctgca
    15541 cacaatcaca ccgtgcgaag tattgccgcc cagcggtatc actaccgctt cgctgccgtc
    15601 gggcggatgg ctggcaaagc cgtattcctg caaatgttca aagtcttgca gggtttcgtc
    15661 ggccaagccg ctcaactgca cgcgctgtat cggctcggac gacaccacca gcgtgatttt
    15721 tccccgaaag gccgcgcgca gggtttcgcc gatattttta gcagtttgtg ccgttttttt
    15781 cgccaattta ctcaaactca ttcaaacacc gccgtttctg cttgtttttt gccgcctttt
    15841 ttgcccttat ggctcacgcc tttgcgtttg cctttgcgct tgcgcgccgc ctcggccttt
    15901 ttggggtaag cgtcgggtgt ccaaataccg tcctctttga gccgcagctc ggtttgcgtg
    15961 ccatccatgc gggatagcat aaaccgccgc cccatcagaa aaaacaccgc atcgataccg
    16021 tgctcgtcgt cgatcacatg cacacgctgg ccaggttgcc acaatacgcc gtcgcgggtt
    16081 ttatggccgc ccacggttat cgtgagtgta aatccctcca gccgccagtc ggccagctgc
    16141 tttttagcct gcttttgcaa tgcggccaaa ttgtcggcat cggacaccac caccgtttta
    16201 gggcggtgca gcgtcatcgt cgggtctttg tacacccact ttaaatcgtg tttggcgctg
    16261 tcgccgctgc ggccgtgcga ttgcgccaaa aaagtaacct cggaaaagcg gttgtcggta
    16321 tcccactcaa tgtccatgcg ctcgatattg cagcggctgt cggtgcggct ccaacacaat
    16381 gtcgccaccg gcgggctgct gtaatccgca ccgcccacca ccaacgtgcc gtccggctcc
    16441 agccacggat gcagcccgac cgagttggca atatgggtta atgcctgcca tacggtttcg
    16501 cccggctcga tgtcgatttt gtccaaagcg gggttgtttt cggccttaag caccaccgct
    16561 ttaatctgcg gccacggcgc ggccagcttt ttggctgcat ccaataccgt catgcccttt
    16621 acattgagct gcggcgcgga gcaatccacc aaaaaaccgg ccaaatcacg cccgctcaag
    16681 ctcaactcgc ggctgccctt gcttttgccg tggcgctggc tgccgatgat gcccgtcatc
    16741 acgatttgcc cgtctatcac tacctcgcag ctctctccgc ttaaatcggg tatggccgcc
    16801 tccggcccca acctgccgat gacaaaatcg aagctgtcgg cagggattaa aaagtcgctg
    16861 tcgatgtcgt agcgctccca gtggcggtgc tctttaccgc ccacgcgcac cgacacggca
    16921 tagccgtatg aattattttg catagctgtt gaccaaagtg ccgcgcttga taaacgcggg
    16981 gtggtggata tggggattga gccgcaccag ctctgctgcg cgggccatat cgccgtaaaa
    17041 ctcgtgggcg atttggtgta tcgtaccgtc gattggggct tggcgcacaa tcagcggcgg
    17101 cttttggttg atggccgccg caaccaacgc attcagacgg cctgccgccg cgcgcaggga
    17161 ttctgccgtt tggtaagcct cggtatacac ggcgttggcc gtcagcccac cagactcggc
    17221 agcagccgtc tgcaccgccc gcaaggcggc aatctcggcc tgcatacggc ggcgcatggc
    17281 gcggttaacc tcaatcaaat cgggcgcggt catctcttcg ccatgcgcct cgattaatgc
    17341 cgttgccacc gacaacagcg atgacgtgga taacaggcgc accgcctgcg ctaccggctg
    17401 cacctgtttg gcggttaacc ggttcaggcg gttttgcagg ccgtctgaaa agcggccggt
    17461 cagtaaatta tcagggatag cggcggcacg gtcggcaaca gccacagccc cgtcaaaccg
    17521 ctgtcgcggc gaccaaccgg catggtgcat ggcattatcg gccaaacccg cctcacggcg
    17581 tatgccagta tctaccatga ccgatatatc cgcaaacagc ttggccgagc cgtttttaaa
    17641 cgccgctgcg ctgtatccgc cccgatcggg aaaggcaatt ttgtccaaat caaacaaacg
    17701 gcgcaccgca ccaaacgtac ccgatgccgc actccaaatg cccagcgcgc tgccccataa
    17761 agccgatacg cccgcatcca ccgccaacac cgcatcaaca aagccgatag ccgcctcgcg
    17821 gtaggtgtcg atatcagcaa tcaacgcctc aagctcgacc aaaaaggcgt tttcaaaaac
    17881 aaagatttcc tgcgcttcgg ccgcctcgcg gaaagtaata tcgatgcccg cataatccac
    17941 ataatcggcc tcatgtcggt aactccatga tgccgcaatc atgttgtgca tccgccccca
    18001 aacagggtgc accagcacgc cgccgcccgg ctgctccagc gcatccagca gctttttcag
    18061 acggcctgca tagcccttgc cccaaaacac cgcattaatc tgcacctgcc gcccggtcat
    18121 gcccatgtct tcaaggtcga taccctgcac aaacggccgc gcatgctcgg ccaatgcctt
    18181 gccgttgctc tcgtccacca cctcaatatc aaagccgacg cccttgtaag atgcgtcctg
    18241 caataaggta tgccatccgc tcattattga cccgctccac ggccgaacat ggccacttga
    18301 taccgcgata cctcattcgc gataacacgt ccgtcgatat tcaggctcac attggtattg
    18361 atggtctgac ttgccgacgc catcgcactt tgcacttgtg ccaaacctgt tgtaactgca
    18421 gccgtatcct gcgccaatgc tgcctgatac gccgccgtct gctgctgaat ggctgcctga
    18481 tacgccgccg tctgagttga aaacaacgga gacaacatct tatcggtagg ctgcgctgac
    18541 ggagcagcca aatactgagg gacaccaccc cgcgcctgtt cccgcttcgg cgcaggttca
    18601 aatcggatac cgttgttttt cagacgatta atcatttcag gagttgtctt ggtaccacgc
    18661 aaaccctttg gcaatgtgcc gtcacccaaa gactcggaat acagcaacat acctaacaaa
    18721 cccgcccgtt taactaacgc tggattattc atgagcccgc taccggcaga ttttccccat
    18781 gacagcaact taccgcctgc cgctgtggca cctgctgcca cgccgcctgc ggaagcctta
    18841 ccccatccca acgctttact acctacatct ttcagaaagc ctgcaccttt accgccaccg
    18901 gcggttaata acattgcggc agacgccgct gttgccgccg tcgtcaatgc ttgcagggct
    18961 agagtggcat tagggtattc cgctgccagc tttttaaacg aggtttccat atccaccaat
    19021 gttcccgtca gactttcccg caacattgcc agcgattcct gttgctcttg ttgcgccgct
    19081 gccgacaaca ttcgcgcctc gttgttctta gcaatttttc cgttatccaa cgttacgcca
    19141 gccaacgaag ccatatattc acggatttgc gtcatatccg ttgcagccag caaaccttgt
    19201 tttgcctgca aatcaggcag cagttgcgcc aaaagcgcgc ccttaagcat atttgcctgc
    19261 tccgccgccg tcttatcgcc tgcagccgcg cgtttcttat aatcttggta ttgcttatcc
    19321 tttactagca tggcatcggc aagacgggac aacacctgca ctgcgttttc gccgttttgc
    19381 ttgccttgca caaccgagcc tatccaatcg acacctttct tcgggtcatt cggatttgcc
    19441 atcttcttca gacgacctat cgtgtcaggc gacagagttt tactcaaaag attttgcaca
    19501 ttagtcgccg cttcggcagg actgcccgat ttattcgccg cagattgtaa gagtgagagc
    19561 aggtagtcca aaccgccgac accattcatc cctgcctgtt gcgcggcagg gagcaggctc
    19621 ggcagctccc gaaccatatc ccgcacctcg aaagtgccgt ctaaacccga ttgcaagacg
    19681 tgctcaagcc cgagttgcag gtctttaccg ctcatgccgc catctttcag ggttttaatc
    19741 agttttgccg tatcctcgcc actgccttct gaggcaagtg caaaagcata tgccgcctgc
    19801 gcttcattct tggtttgggc aaaattcaga ctggtggtca tcatgccgct gattaaatcc
    19861 aaagccttat cgtgggtccc gccatttttc tcgacaagtt caagtgccaa atccttgatc
    19921 tgttgcgcac cttcagttgc aatccacgct gccgatttac tgttatcctc aataaatgcc
    19981 tgtctggaca cgcggttgat gttctcatca agctgctttc tgttgtccat agcaggctta
    20041 agcaccgtat acgctgccgc gccaccagcc accgcagctg caccgaatct tccgattttt
    20101 cccatcttgt ccgcaaatcc cgtgccctgt ttcagttccg cgttcagctc gcgaattcgg
    20161 ttacgcgtag cgaccgccgc ccgtgccaaa tcattttgtg atgccttgcc gctgcgcgcc
    20221 aaacggttaa acgcagcctg tgtcagcatg atttcgcgtt gaatctgttt ttctgagcgg
    20281 atgccggtca acgcataagt atggctttgc cgttcaagtt gcgcccgcga tttcgcggta
    20341 cgatctaatt gtcgttgagt atcagccagt agccgtctcg ctccgtcatc tcgggcggtt
    20401 aacaccaacg acagtttcat gttcccgttt gccataaaaa gcagccttta aacgtattaa
    20461 ctcaaggtca attatcgttt aaaggctgtt taagggaggc ggtatgggct tcaaccccgt
    20521 tttcgtgctt tatttgtttg ttgcgttata ataccagaat gataaccatt ttattcaaag
    20581 ggatatttta tgaatatgaa aaaattgatt tccgcaattt gtgtttcaat tgttttatca
    20641 gcctgcaacc aacaatcaaa aacggcacaa gccgaagaac ctgtccaaag tatccaggct
    20701 gctgattgta ccgccccaat ggacatcaca gttgaacaat atctcatcaa tttggagcaa
    20761 gcatttaaaa ctcagaacgt ctcaacaaaa atccataata aaaatattgt caagaccgat
    20821 tgtggttatg accttacttt ggtaatggat tttggggcga ttgcgctcaa actggacgag
    20881 cagcaaaaaa ttagagctat ctcagtaggc tacattttaa aaaccgacgg agagaaagga
    20941 caaaatctag tcaataatgc cataaatgga ttacacagta ttcaggcagt tctgtcttta
    21001 actaccacag acaaattggg cgaatcggaa gcaggaaaac aacttcgtca aagaatccaa
    21061 tcagacagga gcaacagcgc aaaaagacgt tccggcagat ggtattttat atagcgttgt
    21121 ttttgaaaaa gaaacaaaca ccattgcaat aatcggcaga aaacaaccct aaccgtcaaa
    21181 taaaaaaaag gtcgtctgaa actcagacga cctttttatt ttccctccgg ctttctcagc
    21241 cgtttcgaca caatcactcc ctcttccttt ggcgttttta tgcccaggct cgacaggatg
    21301 tcttcaaacc atgccgacag ctcggcgtgg cacatatcgc gcactgcgtc cgcccctatc
    21361 cccgcctttg ccatcaggat gaccgcctga cggtagcttt tgtgtgccgt caggtagctg
    21421 cgttttactg ctccgccgcc gacggcgcgt cggggctcgc cgtagcggcg gacggtttta
    21481 ggcacaaatc ctcctgagcc gccatcacgg tatggtagtc ttcggtagag aggttttcca
    21541 tcagccactg cgccgtcagg atgtcggatg ggataccttg ggcttcaatc tgctgcgacc
    21601 agtaggtcag cgtctctagg acgtcgcgtt gcagcagttc ggcttttgtg gcgttttcgg
    21661 gcagctcggg caagtcatca atcagggcga acgccgccag ttcgccgccg acggtcagtg
    21721 gcttgaggcg taattcagat acgactttgc cattgtaggt cagcccgtgg gtcagtttga
    21781 cggtaatcac gcattactcc ttgattttgt gcaaagcaat catctcaatg tcgatgcgtg
    21841 cctcgttatc gacttcatat tgctcgctgg tatcgacggt aaagcagtcg aggtaggaag
    21901 tgcggcgacc ttcgtcgttg atggggtaaa tcgtgatttt cgccttggtg atgttgtccc
    21961 agtcgatttc cgtaccgtcg atcggaatgg cggcggtaac gcttaatttg tgttcggtta
    22021 cgccgtcaca ataaccgttg actcggccgt tgcggttcat cgttttgacc ggcttgcggc
    22081 ctgtagtggt ttgcggcttg atgctcacaa tctcgatatc gcggccgttc acctccataa
    22141 tcaccgcgcc ggtataggta gcgtcgctca tgctttatcc ttttttaagg tttcagacgg
    22201 cctttaaacc tgttttaaac gccgtctgaa aagggttaca aaatcaaatc aatgcgcccg
    22261 gcaaagacgt gcaggccgtt gaccacatcg gcggggataa tggcattaac acggttgggg
    22321 tcgttttgcg cacgcgccac caccagcttg cctttgttgg cctcggcgtt ttcgatgatt
    22381 tcggcttggt cgagcttaat cagcacgtcc aaaatctcgc tcttaacctt gggcagcagg
    22441 cggtcgctca atttgtcgcg cggaaaacgc agggcaatgc gctctttaac gctgcggcgc
    22501 acataatcca gcgtgcgaat ggtggtaatg tcgagtagtg ccgggtcgtc ggtgttgttg
    22561 gccgacttgg tataggttga tacggcacgc ataatctgca cgcggttgtt gaccgctgtg
    22621 agcggggtca agccgttgta cagcgcattg ttgcattctg caaaccacgg ccattgcgca
    22681 tcaggtgtaa cggccagccc tttgatttcc agcgtgttca gcggcttggc agggtcttct
    22741 tcaaaggcca acaccgccgc ataacctgcg gcgatgatgc cgtttggctc taccgcacct
    22801 ttgtaccaag cacaggtaat gcggccgtcg ttgattttgc cggtagcggt ggtggccgtg
    22861 ctcaaggccg cactcatacc caatacgccg atacagccgc gctgctcgat ggcgttgaat
    22921 acgttggtaa tatggttgct caaggctttg gcgttggcgt catcgctaaa cgggctgcaa
    22981 ataatgtgat aatgcttgcc cgccactttg gacaaggccg tggcaatgtc cgcatttttg
    23041 gcaccgccgg taaagacatt ggcttgataa gtcaggccgg tattgccggt gctcacggtt
    23101 aagccgctct cgttgccgat ctcgcctttg tgtttggccg tcagcgtaac ggctgcgccg
    23161 ctgccggatg cggtaacggt tacatcggcg gcagtgatgg cggttttcag acggcctgcc
    23221 actgtggcgg cggtctcgcc ggtgttaacg gccgtgctta cctgcttgcc gccaatcgtg
    23281 atttccacca cgcccggcgc ggtggccgtg ccggaaaggg taacggttgc ggttgcctgc
    23341 acgcctgcgc tgtggtcggc aataccgata acggtcaaat ccaaataagg gttgttggca
    23401 aatgcttggc gcaccatcaa atgcgccagc gagccttgtc cgaacaaatc ggccgcctcg
    23461 gcatcgctaa atagttgcac cggctctaag gcgggctgta tgcccgcggt cagcatgggt
    23521 gcaaccatca ataccttttg cggattttgc ggcaaacctt gcacggcatt gcgggtgtta
    23581 aattcaatat actgcccggg cacgcggatg ctgcccggaa tcgtgtcaaa atcaatatgg
    23641 ggcatcatta ctctccctta gtattgcggg ttttggtatt tggggcggca tcctcaacca
    23701 ccaccaaatc gccgtcatca atcatgcggc ggtaatacag gctgttgccg tccacctcca
    23761 ccggctcttg gccgatatat tcgtgcgggt tgtgttcggt cggcacacgc aggccatctg
    23821 ccgccgttac tttgattttg ctcattgctt atccttaagg gttaggttta caggtatttc
    23881 atcggcggat tgcgggtcgt aaattttgcc gtccaacccc tcgaaatcag gccacggctc
    23941 gctcaatgta ccctgatact tggtaaagat atggttgggg tcgtcgggat tgtcggtgcg
    24001 ttcggggtag cggtcatttt ccaacccgca ggtgttaaag cggatggcat actcaaccgc
    24061 atatatgctt actgcggcgt tttgcaccag cacatgattg gcaatcgcgc gcaccgcttt
    24121 gggcaccaag ccgcggctat cggcaaaacc gagccgctgg ccgtcaagca ggcggcgaac
    24181 agcgcggatt aaatcgttgc tgccgatttc gcggctgtcg atgccgcctt gccgctgcgc
    24241 ctgctcgttg cgcagattgc gggccgccac catcaccaca aattcggcgg tatcctgata
    24301 acgtccgcat acgccgccgg tgctggcagg ctcaactttg ctgccgccat acgttaccca
    24361 aaccgcaggc agcgtatgga tttgccccgc caaatcgtcg gcctcgccgt tgtagctttt
    24421 aaccgtgcgc accatgcgac ccaagccccg tttcagacgg tctgttatcg cttgctcaat
    24481 atcagtgatc acgcccgaac accttatttt taccgtttac aaacacaata ccgtcttcgc
    24541 ccgcggccac ttcttcgccg ctatcatcca cgcccagctg cacttcgcct ttggccatag
    24601 cacgcagcag gtcgagcacg tcgattttgt agcggttgcg gatttcgtcg gtaatcaaca
    24661 cgccctgagc cgccgtcaga cggtagcggg caatgtcgca gcaaaggcgc accaagatgg
    24721 gcggcagatc ctcaaaaggt cgtctgaacc gccccagata cgcgtcgatt tcggcagtgg
    24781 cgtccaccag cgcggtttgt gcgacctcgc ggtcaatcag cccctcgttg ttgcggtcgg
    24841 tgagctgcaa gacttccagc tcaccgaaac gcgcaaccat atcctcaacc gtcgcgtatg
    24901 ccattactcg accgccttgc gttgcagcat aggctcggcg cagattgcct tccacaccgc
    24961 ttcgccgact tcggcgcgct tcacttcacg ccagccgccg tcaaacagca ggccgccgcg
    25021 ccaaaattct ttgccgtctg cgccggtact gacgagcatc acatcgcggc tgtccgccaa
    25081 agcgtcggcg gcgcgttgcg tatgctgcac tttgagttcg gcaagttcgg cggacagtgc
    25141 ctttttgtcg tcttcggctt tttccaaggc tgtggtcagc atttcgacat cgtttcgggc
    25201 ggcggcaagc tctgcctgca cggcgtccaa ttcggctttg atgtcttcaa acgacggggc
    25261 ggcggtttcg gcggtttctg gtttgttgtt ggtttttgcc atgatgactc cttgtttcag
    25321 acggccttta aataggtgtt aaaggtcgtc tgaaaacggt tcggggttac aggtggacgc
    25381 aaacgtgcag tttcagacgg cctttgaagg tattggtcgt gccgttgatt ttgtcggctt
    25441 ccaataattc acgggctttg tcttccagct cgggcggaac gaccaagagg ctgggcttca
    25501 cattcaacac atagccaccg tcggctttga ttttctgcat tttgacgata atggcggcga
    25561 ggttttcgcg ggtcagcgcg gttttttccg ccatgtgcat cagttgccac aaaccgaaac
    25621 cggcattgca gcggcggcgc gatccgtaca ggtattcgtc ttccataaac acgcggtcgg
    25681 atttggacgg gtcgaatttg gtttcaaact cggagtcggt gcggttttgg aaaatcagcg
    25741 gcttcagggt cttggtgtca tcgacgacgt agaaggtcgg cgcgtcgttg tccgtaccgg
    25801 tcgtcagatt ggagtgcggc gtattctgac ccgtgccgtc cgatttctcg taaacggggt
    25861 ggtcggtatc gaagaaatat tggccgtcat aaccgacagt ggttttacct tttttgagca
    25921 gaccccacac cagcgtatcg ggcagggcgg cggcggactc gcccattgcc gccatcatcg
    25981 ggcggtacat gccgacttgg tcgtcttcga tgtccgtacg cgctacgccg acggttgctt
    26041 caaacttttt gttgtcgagg ctcatcgcct gcttgttcat tttttcgatt tggcgcgagc
    26101 cgacccattc gcgcatttgg gggaatttgc cgagccacgc ataagtattg gttgccgtat
    26161 tggacggaat ggtcatcgca acggcggtat agtcgggctt gacggattcc aaacccgttt
    26221 gaaattcttt gcggaatgct gccgtgattg cggtcaaaat cgctgatttg tccattactt
    26281 accttcgctt tctttgattt ttacaaattc ttcgccggac atgcccagca tttttgctgc
    26341 ggctgcctct tctgcagtca gtgcggcgac gcgttcgtcg ggtgctttac cgcccgtttg
    26401 cgagcctgcc agtgcagcga ccggctgggc gttttcaata aagccggtca aaaatgccaa
    26461 gccgcccggc tgtttcaata cgccttctgc ccactccttc tgagcaggca gcaatttgcc
    26521 tgaagtcagc gcggcggtaa tcaattcgtt gcctttgtct gcttcctgct tggcagtcag
    26581 cgcggcgact ttgctttgca gctcttgaac cactgagata ggcgcgtatt tagtcaaatc
    26641 aggcttggcg gtttgcgccg tcaatgccgc gatgcggctg tctttttccg ccagctgcgc
    26701 gaacacgtcg gcagacaatg ccacgtcttt cggcttggct tccacgagcg cggacaatgc
    26761 cgccttcagt tcttcttcgc ccgcatcagg cagaccgaac agttgctgta acaactcttt
    26821 catagggttt tgctccgttt ccggttttaa aatttgcgcc gacgctgccg ccagcacctc
    26881 gtccataccg tccaacgcgg ggaaatttgt cagcgcggcg tgaaaaattt tgcttacata
    26941 tccctttgtg tcataggaaa acacagcaga gatgtagcga tactcttttg cggcaattgc
    27001 cgcagccgcc ttgtccgtcc actccacttc ggcaaacatg cctttaggcg tgaactccag
    27061 ccaacgcatc caaccggcgg caggtgcagg ttgtccgttt ttctctttgt agagcgtctg
    27121 gtgttcataa tcgacaacca actgattgcg cgagctgttg gccaacaacg cgacatcatg
    27181 accgttttct tcggtcagat accacgcagg gacatcagtc ggacgaccgt ctactgcgcg
    27241 aaattcgcca tatggcagca gttggattcg cccgtctttt ggctgcacct cgaaactgca
    27301 cacggcaagt agggtttttt gtgcattttt ggacatgtgt acctctctca atacggtcat
    27361 tttgcctatt tgaaaaaaca acaaagagta ggcgtgcttc aaaccctccc gccatttttt
    27421 taaaacctgt ccgcgcgata cacaattaat cgttttcagg ggctttttag aagcgtctag
    27481 gattgatttt tatatcttgg gcaggggttt gtattacccg cataaaaaaa cgcgctaaaa
    27541 agcgcgtttt tgagggtttt ataaattcac ggtatcagac ccgaaaaata atcctgcaca
    27601 tcgtccatca aagcctgttt gtcgtcgtcc gtcagcgtca aaaattcccg ttgcggaatc
    27661 cgaactttgc ggttgcgccc cgccataccg ccgaagttgt ggatggcggc atagacgata
    27721 ttcgtaccga caagggcggt atcgttgtct gacagtgtgg aaaaactgtc tttcagacga
    27781 cccgaatccg aaagcggctt gccgtcgcgg tattttagcc ccaaccattt cggacggcct
    27841 gcgtagcgga aattgagctt gaccgccgtg tgcatggttt cggacagtcg gcgcatcagc
    27901 aggtagcggt tttcgatccc gttgccaagc cgctcgattt ggtttaggac gacaaagata
    27961 ttgtctattt tgacatcaat catggtatta tcctgcctag gctactaaaa aagcggtgaa
    28021 tttgtctgcc ctccgcagcc cttatgcagt cctcggactg ggattggtat ccgttacata
    28081 agcgagagtg tgtcgggatt gcagtccgac ttagtagcct tttttcattt catagcgttt
    28141 cttacttttc acaatttctt tttcatccgc cctgcgaaac gaatccaaaa aaatcgaatc
    28201 gtactgtggc agatatttca aaactgccat caatctgtat ttttcgttcc cctccaacgg
    28261 ttttccgagc aaaacaaaac tttcttttcc tctgcttttg tcataaaaaa tatattcggg
    28321 ctcatgaatc agatcgggga gcatggcata taaatctgtt ccaaacgatt gcccctcccg
    28381 actgtccacc tgtttgacca atgtatcatc agacagccac accgtcgctc gtgtcatacc
    28441 tgccaattct tgcgtttcct tgctcaatac acccgcagca aatttaagct gtcttgatag
    28501 cgcatttcgg attttgattt tctgctcttt atcgggcttg ccatcaatat ccaaacgttg
    28561 cttgacttca taaaactctt tttcaagctg tttaaagctg gttttaaaat ccgcaccacc
    28621 catttccgct ttggcaaatt gatgcgccaa cgcacggtcg tacttgtcta aatcggggcg
    28681 gtagttcatt cgtccggcgt tgtaatcaaa tcctcgatcg gtcgtgtaca gactgccatc
    28741 cggtgcttta taggcaaggg tcagataagt atcgcctttt ttgttgtaga ttttatgggt
    28801 ctcgactaga ttgtccgccg tgctttgccc gacaatccgc ccctggcgtt ccacatcccg
    28861 ctccgacagc gcgatgaccg agcaacggca gttgtagccg ttgggcgggt aaaacgttgc
    28921 ccaaaacggg tcgtcgtagc ggtacaccag cccgtctatt gccgaatgcg ccggacgggt
    28981 gcggctgtcg cctaccgcgt catacatcca ataaggccgt gcatcaatat ttgccatata
    29041 tccttgatat tgaccggcgt tgtaggcagt ttgcatgttg gtacggtaaa tcgtctccaa
    29101 cctccgcggc gaaccgaata cctcgccggt ggctgggtcg atgatatcct taccgttatg
    29161 cccgttcgga tgcagccagc ccttgttgcc gagcagattc aagatacctt ttcgccaatc
    29221 gtcaaacgac tgtccacttt ttgccgattc aaccatcgaa gttttgatgt cgttgagcat
    29281 atccaagtcg gtcatgcggg caatcgtata gactttggca atttcggagg ctgtcagatt
    29341 gcggtagctc tccgccgtaa cctttttact ttccagccac tcgattgcct tttttggcgg
    29401 cagacttaag gcaaatccca aatcaggcgc gggcatggtc ttgtcccaaa atatcgctga
    29461 taaacaaggc ctgctgcata taggtacgca gtttcgcgtt gtccaaattc ggataaagcg
    29521 cattcagtgc ggcatctgcc tcctcgtagc tgttgcaagc attaagtgcg gcaaccgcct
    29581 gacgcaccat cgggttgagc tgagaattga aatcgggctc aaccagcgcg tcatccaacg
    29641 cgccgtccaa tatttcctga tgcctgcccg tagccttaga tggtacggtg tgggcggata
    29701 aagccgccaa tgcagttctg tttatcggat tgtccggtac ctgccgcacc aacacagcct
    29761 caccctcctg cacatctgga atgaccagtt tgtcgcgcac ccagctttcg gggatttgta
    29821 cgccgacatc caccagtttc gggatagcgt cggcaaagac cgcgatgtct ttcggctcgc
    29881 gcgtgtcaaa ttcaaatttc ggcacgcggt ttgggtcggc attgggatag ttgatttgca
    29941 ggaacggtcc gatgatttgg cttgtgatgg tttgcgccac ctgttttgcg tccgacacca
    30001 gcaaatcgcg gcgtacctcg ttgtggatat tgcccagcgc gttggtgctg gattttccgt
    30061 ccgcaccgct ggttagcgtt tgccccaaaa tcagccgcgc cgccgatttt tcgcaccagt
    30121 cggccatctg caaaaacgga ttgctggttg ccatcgtacc gcttgcagcg ttgtgcagct
    30181 cgatttccat accttctggc atgatgcctg ccgcgttgtg accgatttcc gccaccgctc
    30241 gaagcagggt gtttttttcc tctttggttg cgcccgcgcc gtatttgccg atacggatgg
    30301 gcatgccgta cagctccaaa aactcggcaa aatcgtggac ggcgtagtgt ttgaacatat
    30361 acagccagga aagcgtgcgg aaaagcccgt tgcgcgcctg ctggacgctg cgcgattttt
    30421 gggtatgaac gacccagccc agcggccaca acgcttcgcc ttccggattt tcgcgggtac
    30481 gcagcagcag cccgttgtct ttgtcccatt tgaaccagct ttgcgggcgg tggataaagt
    30541 ttcggggtag gtaaaggccg tctgaaaata cccactcgac ctccaacgca gaaaatccgt
    30601 gccctaccgc gtccatcaaa tccataatca ggtcttcgag ggtaggcagg ctgtccatca
    30661 tttcgtaggc ttggtcggac agcttttctt cttcgggcgt cgcatttcgc ggcggggcga
    30721 cgcgccagtt gagcgtcagc agcgcgcgtt tgcgcgtccc catatttgcc gcgatgtcgc
    30781 tgtcgcgctc ctcaatgtcc gcgaaaagct cgtgttgggc gcggatgtcg ccgctttccg
    30841 catcctcgaa gagggcccgc atcttttgcg gtgtaataaa attggacgga tgctcggcga
    30901 taacccgacc ggtcgccgta atttgagcca cgtccgtctg caatgcagct tcgggctttt
    30961 ggattttagt tttattgttc ttttttgcca ttatcggctc catttacttt ttatctcgtt
    31021 accaaaatcg ttatcggtag ggctttgcca ttctatcggc acacaattgg ccaccgcccc
    31081 cgaccagagc atatgcactg catcaggacc atcatcatga tcagcctttg gaaaatggcg
    31141 gaactgctgt atcagcgtct gttggctctc attcaacaga atcaaaccgt tcgccatgtg
    31201 aggctgtaaa gtctcaatcc gcaagagctt gtccgatacc ggcttgaccg cccgcgccgg
    31261 gacaggtatt ccacgcgccg cgctgcgctt gaccagctca tctttcaaaa attcctgaaa
    31321 ctgaaccgtc tcaacaaacc acagtttgca acgatattga cggtgcaatc tgataacgtc
    31381 ctcaataatc aaatcaggga gacgtttttt aatctgagct tccacgacat acagtttgcc
    31441 ggtttcacgt tgataaccgc caatgataat cgccgacggg tcacggctcg cccccgcttt
    31501 acccagcgac gggtcgagcg caccgaaata caccaaatcg gacggcaggt cgttccaaaa
    31561 cttcatcgac ttggcaaacg gcgcatcttc gccgctgacc gggtcgtttt gatattcgct
    31621 gtcaaatgtc gcatgaccgt cacgcgcacg gattttcatc agcgcgagta cgccgcgagc
    31681 cgcccagctt gtttgcgcac cgcgctccat ctcgtcttta ttggcgagat aaaacgcctc
    31741 ggccacagtc tcgccgtcgt ttcggaaaag ttcctcccat ctgtcccaca aatccatgcg
    31801 gtcgggccag cgtttcatcg ccttaaactt aataccgtgc caaaacgggt tattcaaagt
    31861 gcggttaagt acgctgtcgt aatgcaaaat cgtgccgata tatatcacat cgtatttctg
    31921 gccgacaccg cccaaaggca atacagtctt agtcagccac gcattgagct tgtcgcgctg
    31981 ttcggggttg cggacttgct cgtcattctc aatatcgtcc aatatggtca ggtcaggacg
    32041 gtaagggccg tgacgcaaac cgcgcagctt tttaccgcta ccggccactt ggactttaac
    32101 gtcattggcc gtcacaatcg taccggcctg ccatacgcgg ccctgcccgc atacttccgg
    32161 aaagtcggtt ttcaagcgcg gattaaattc caattccgcc ttgatggctt cgagcatcgg
    32221 gtatgcctga tctatgctgt ccatcacaat aacggcataa tgtttttggc ctgtcacaat
    32281 acaccacagc gtaaacaact gagtaacctg cgtcgactta ccctcgccac gcggcgcacc
    32341 caccgcctca ttttcccctt tgggggagcg gataatctcc ggcagacggc tgaataaaaa
    32401 cgcatgcagt tcggattttt caggggagcg gatataatgc ggaaagtagg tgttgacgaa
    32461 atactcgtaa ccgcctaccg ggtcaaacac cttggcacgg cgtgcagcaa tagccttggg
    32521 cgacgcatcg aagccgtcca cttccgcttc gatgacttgg cgcaggctgg cggccagttc
    32581 ggcaagggat ttgaggaatt cttttgtttt catgcattta aaaagtctta atcaattttt
    32641 cggcaatcca gcgtgagacc ggcggacaga cggcgtttcc cgcagcttga gcctccgcag
    32701 tgttggcctc atccattccg aggagaagcc catcatggtt agacgctctt tgccgctcaa
    32761 ccatcgcacc ccgtccgttg ggcgtaacga gaatatttgc gcctgagcgg tcaatggctc
    32821 cattggaaat ccctctaagc aaagtaccat gcggcttttg cagcccgcac gtgtcaaccg
    32881 agcgaggtaa gactccaatt gagccggcgt cagccataaa ctcatagggg gggggtactc
    32941 tcccaatcca gcgaccaaga aaactcgacg gcgtgccgtg gggactccga aatatgctgc
    33001 attaagcacg cgccagtatc ccacataccc gcattcggca agggacttga tgactgtttg
    33061 aaagtcttcg ccattgttgc tattgagcaa acccgtaacg ttttcaagga caatccagcg
    33121 gggtttaagc tggtcgacaa tacgcattgc gtcataaaat aaacctgttc tttccccggc
    33181 aagaccttta cgcttaccgg ctattgatac atcctgacat gggaatccgc caataatcac
    33241 atctaccggc cataattctg acaataccgt tctgacatcc tcaaactgtt ttgcgtatgg
    33301 gaagcggtcg gtcaaaactg cacggggtac aggattaatc tctacttgcc aagcagtgtc
    33361 aaaaccagcc tgttcaaatc ccaaatcaaa cccgccaata cctgcaaaaa ggcttccgac
    33421 ggtaggtttt tgcttatcca aacttcttct ccacctccac cccaaacggc tccaatacct
    33481 ccacaaaagc aggcaaatgt ttgggatgtt tttcttgcac aaacgccatc aagaactcaa
    33541 tcaattccaa agccgtcgcc agttttgacg tttccggcat cacacgcgca ttggcggata
    33601 cggttttcgt aaacgcatcg gccaggctgg ccaacagctt ggcgcggtcc gatggcggca
    33661 aatcttcggt actcgaatcc tgcagcatcg tcatcgtgct gttgtactgc accataaaac
    33721 cggccaacat cgcacggctc aagtcttcaa taccgccgtc ggccaaagtg taggaggcgc
    33781 gcatcttatc ccagtcgtcg cctttttcct tatccgcacg tttccacgca cgcgcagtgg
    33841 tctgcgggat ttcgcacatc aaggccgccg tttccaaagt ttgctcgccg ctcacataga
    33901 gccggcgtaa cttttcacgg atttcttgcg ggtgagccat aattacagcc ccattttcgc
    33961 tttaagcaat tcccagccga ccgtaatcac gccgccgccc agtgcgccga atgtaatggc
    34021 cgtgcgtttc gtgtcttggc ggatttgtgc aatttccgcc tgcatttcct tctgattttt
    34081 cagcgtttga tcagtcttgt tttcaatacg cgccaaggct tccaaaatcg gggcactcat
    34141 gatttgtctg ctttcctgtc cagtttttcg tttacttttt ccaacttgtt ttcgatgcgt
    34201 cccaacgaag ccgcaatatt gtcgcggtct gccttggcat cttgcttggt gtgataagag
    34261 agcttgaccg cgtgcagctc ctctttcagg tcgtcgatac gcttgtccgc ctctttcaga
    34321 cggcctgaaa tgccgttgac ccaaaaccaa aatgccgccg tcgcaatcgg ccacagggtt
    34381 ctgaaaccaa attcaaagtc catttaaaac ccctttaaac cggcacatcg ccgaatacga
    34441 tacggacggc gtaaccgtca gggcgattgc tggcaatctc cagtccatca ccatcattac
    34501 aaacacagta atacgccccc aaagtttgcc aaaccgcacg tttaaaggtg ttatagttcg
    34561 taattggata ttcaaggtga aacgtcgtct gaaaatcctt atccatgcgt accgcgtact
    34621 caatgcctgc cttatccaac agatcggaaa catgaatgac aaacggctct tgttcgcgtg
    34681 cgcggcttaa gcccaattcc aaatcggcat ggcgcacagc caactgacgt tcaactaatt
    34741 cacggtaggt cattctttga tacccattaa atattttgtc cgcttgtaca atttcttaac
    34801 ccacgaaata tttacaaatg tataaacctt tgctacaact tcgccgtcat agtgcgcatt
    34861 ttctcgtgca gcccgaaatt tcgccctggc ttcttcaggg ttgtccgccc aaatgctcaa
    34921 tgaccaggac ttgccgttaa agcggtaaga aaacgtgtac tcattcatag gagaaacctt
    34981 atgtattttg aaatctataa agacgcaaaa ggcgaatacc gttggcgttt gaaagcagcc
    35041 aaccatgaaa tcatcgctca gggcgaaggc tacaccagca agcaaaactg ccagcacgca
    35101 gtcgatttgc tgaaaagcac taccgccgct acccctgtaa aagaggtata aaatccgctt
    35161 ttaccctcag cccgcgccct acgcgggctt ttttgtcagt ttccgacttt gcgggagtga
    35221 ttgcccgccc agtcgcgcca agcctgattt tggttttcaa gttcggcaac atagccgcca
    35281 aactcagcgg cgtgttccaa cagcgttact gtcttgccgt ctttcggcgg attcgggcgt
    35341 accggcgcaa ccatcaatgc ggcaggcggt gtcggcaaga ccgccttttc gacaacctta
    35401 atttccgtag ccgagggcgc gcttgtagag ctgcaagccg tgagagccaa agccgtcaat
    35461 acaaccgccg cctgcatttt tacggtcttg agtaaggaca ttttcgattt cctttttatt
    35521 ttccgttttc agacggctga cttccgcctg ttttttcgcc aaagccatgc cgacggcgtg
    35581 cgccttgact tcatattttt tagcttccgc acgcgcctgt tccagctcgc gtgcatagtt
    35641 ttgagccgac aacagcaggg cttgcgcttt gtctttttcc atcttgtcaa tgaccgcctg
    35701 ctgcttcgca aaagccgact tgtagccttg atggtgcgac accgccaaac ccgtgccgac
    35761 aagcgcgatg atggcaatcg gttgccagtt attcgccagc agtttcacga gattcattct
    35821 cgacctcctg acgtttgacg ctgaccaacg aacgcgccac cgcatagccg ccgacaatgc
    35881 ccaaatacac cgcccaaatc tccgccgacg ggtcgggcag catcacaaac ttaaccgtcc
    35941 ccgccgcgca ggcaacgttt
//
LOCUS       DAWEYF010000003        35157 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.003, whole genome shotgun sequence.
ACCESSION   DAWEYF010000003 DAWEYF010000000
VERSION     DAWEYF010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35157
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.003"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(144..234)
                     /locus_tag="WGN93_000102"
     tRNA            complement(144..234)
                     /locus_tag="WGN93_000102"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="WGN93_000103"
     tRNA            complement(273..359)
                     /locus_tag="WGN93_000103"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(395..481)
                     /locus_tag="WGN93_000104"
     tRNA            complement(395..481)
                     /locus_tag="WGN93_000104"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Leu,seq:cag)
     gene            570..2945
                     /gene="rnr"
                     /locus_tag="WGN93_000105"
     CDS             570..2945
                     /gene="rnr"
                     /locus_tag="WGN93_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ0226080.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGIDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRQ
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKTQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLATLREQL
                     GLLGLQLGGGDNPSPKDYAALVEQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WGN93_000106"
     CDS             complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WGN93_000106"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ0226081.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     ALIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRNRLV
                     TVPEGTSIDEAREIMHAHKVERVLVLNDQDELKGLITVKDILKTTEFPNANKDAEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVSEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSADKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4894..7452)
                     /gene="glnD"
                     /locus_tag="WGN93_000107"
     CDS             complement(4894..7452)
                     /gene="glnD"
                     /locus_tag="WGN93_000107"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ0226082.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVGELCESVRDDITGDTAFLEARFLFGNRQTADKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGISDARQFAADHF
                     LTEEESDLLAWLVENHLLMSIVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQALLEQLT"
     gene            complement(7501..7821)
                     /locus_tag="WGN93_000108"
     CDS             complement(7501..7821)
                     /locus_tag="WGN93_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0226083.1"
                     /translation="MMGNKLTPPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPS
                     ESGI"
     gene            complement(8146..8619)
                     /gene="bfr"
                     /locus_tag="WGN93_000109"
     CDS             complement(8146..8619)
                     /gene="bfr"
                     /locus_tag="WGN93_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ0226084.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(8647..9111)
                     /gene="bfr"
                     /locus_tag="WGN93_000110"
     CDS             complement(8647..9111)
                     /gene="bfr"
                     /locus_tag="WGN93_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ0226085.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(9575..10558)
                     /gene="lipA"
                     /locus_tag="WGN93_000111"
     CDS             complement(9575..10558)
                     /gene="lipA"
                     /locus_tag="WGN93_000111"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ0226086.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(10551..11174)
                     /gene="lipB"
                     /locus_tag="WGN93_000112"
     CDS             complement(10551..11174)
                     /gene="lipB"
                     /locus_tag="WGN93_000112"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ0226087.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11176..11451)
                     /locus_tag="WGN93_000113"
     CDS             complement(11176..11451)
                     /locus_tag="WGN93_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ0226088.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            11636..12706
                     /locus_tag="WGN93_000114"
     CDS             11636..12706
                     /locus_tag="WGN93_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ0226089.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(12813..13760)
                     /locus_tag="WGN93_000115"
     CDS             complement(12813..13760)
                     /locus_tag="WGN93_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ0226090.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(13775..14182)
                     /locus_tag="WGN93_000116"
     CDS             complement(13775..14182)
                     /locus_tag="WGN93_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ0226091.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIAKP"
     gene            14263..14922
                     /gene="ung"
                     /locus_tag="WGN93_000117"
     CDS             14263..14922
                     /gene="ung"
                     /locus_tag="WGN93_000117"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ0226092.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKRKLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            complement(15430..15945)
                     /locus_tag="WGN93_000118"
     CDS             complement(15430..15945)
                     /locus_tag="WGN93_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226093.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(16411..18333)
                     /locus_tag="WGN93_000119"
     CDS             complement(16411..18333)
                     /locus_tag="WGN93_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ0226094.1"
                     /translation="MIEIKNLTLQRGLKILLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALLKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(18410..18805)
                     /locus_tag="WGN93_000120"
     CDS             complement(18410..18805)
                     /locus_tag="WGN93_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ0226095.1"
                     /translation="MMRRRGKKMLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGIS
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            18978..20285
                     /locus_tag="WGN93_000121"
     CDS             18978..20285
                     /locus_tag="WGN93_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ0226096.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVAREDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEKQNVIVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            20278..20712
                     /locus_tag="WGN93_000122"
     CDS             20278..20712
                     /locus_tag="WGN93_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226097.1"
                     /translation="MTEPKHEMLTKEQVAARKKAKAKIRTIRIWAWVILALLALTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(20771..21040)
                     /locus_tag="WGN93_000123"
     CDS             complement(20771..21040)
                     /locus_tag="WGN93_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ0226098.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(21222..23672)
                     /gene="lon"
                     /locus_tag="WGN93_000124"
     CDS             complement(21222..23672)
                     /gene="lon"
                     /locus_tag="WGN93_000124"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ0226099.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIETVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALLGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHVHVP
                     EGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEPSGAE
                     AAAESASKPKPRSRATKH"
     gene            23923..25026
                     /locus_tag="WGN93_000125"
     CDS             23923..25026
                     /locus_tag="WGN93_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ0226100.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWHYVRESGANGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQADLRVADVL
                     KTKPVHKKAADPDDPLAFARNRETTFLYRLKKA"
     gene            complement(25098..26843)
                     /gene="recD"
                     /locus_tag="WGN93_000126"
     CDS             complement(25098..26843)
                     /gene="recD"
                     /locus_tag="WGN93_000126"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ0226101.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQPFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(26911..27606)
                     /gene="lolD"
                     /locus_tag="WGN93_000127"
     CDS             complement(26911..27606)
                     /gene="lolD"
                     /locus_tag="WGN93_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ0226102.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRLLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAETAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(27599..28846)
                     /locus_tag="WGN93_000128"
     CDS             complement(27599..28846)
                     /locus_tag="WGN93_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ0226103.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDAVWVRDWTYNNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            29051..29329
                     /locus_tag="WGN93_000129"
     CDS             29051..29329
                     /locus_tag="WGN93_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226104.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(29385..30002)
                     /gene="recR"
                     /locus_tag="WGN93_000130"
     CDS             complement(29385..30002)
                     /gene="recR"
                     /locus_tag="WGN93_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ0226105.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(30069..31607)
                     /locus_tag="WGN93_000131"
     CDS             complement(30069..31607)
                     /locus_tag="WGN93_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ0226106.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAMQNEQADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(31662..32036)
                     /locus_tag="WGN93_000132"
     CDS             complement(31662..32036)
                     /locus_tag="WGN93_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ0226107.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAGTQQKVLSSTAEAVKLMSEMPSLIKRPVLECGGRV
                     YVGFSEETYDGIFKRQAPCRQG"
     gene            32126..33814
                     /locus_tag="WGN93_000133"
     CDS             32126..33814
                     /locus_tag="WGN93_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ0226108.1"
                     /translation="MLQSENSKNLISCSIKALPIMISTNGITMQFGAKPLFENVSVKF
                     GEGNRYGLIGANGSGKSTFMKILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVL
                     DVVMMGHTEMWAAMTERDAIYANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLS
                     GVGISEDLHNAKMAEVAPGFKLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVL
                     NQYDSTMIIISHDRHFLNEVCTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNA
                     KAKEKLQELQEFVARFSANKSKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEAD
                     EKAKLHRQAVEVEKLAKLFETQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAY
                     NPEYSDGLLPDEGTIKWAEKASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIR
                     GTLGRLLFGSNDVVKKVKVLSGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESL
                     NMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            33886..35139
                     /locus_tag="WGN93_000134"
     CDS             33886..35139
                     /locus_tag="WGN93_000134"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ0226109.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFSA
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEVANQVDSGKIAAECRAQGKVHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
BASE COUNT         7759 a         9081 c         9587 g         8730 t
ORIGIN      
        1 taccgcaaaa cataccataa aaaaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc gggagaagac tcgaacttcc
      301 acacccatga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaatat tgaaataaag caaagcattt gatttggtgc ccgggagaag actcgaactt
      421 ccacacccgt gaggatacta gcacctgaag ctagcgcgtc taccaattcc gccacccggg
      481 ctttgcttta tttgctgttt tgcggtacag tgtcctgccg caaagaagtc gctattatat
      541 agttcataaa gagaatgtca acagtccaaa tgaataaaaa tattaaatct ttaaatttac
      601 gggaaaaaga cccgttttta agtcgtgaaa aacagcgtta tgaacatcct ttgcccagtc
      661 gggaatggat aatcgaattg ttggagcgca aaggtgtgcc ttcaaaaatc gaatcgcttg
      721 cgcgcgagct gtcgattacg gaagacgagt atgtcttttt cgaacgccgt ctgaaggcga
      781 tggcgcggga cggtcaggtt ttaatcaacc gtcggggcgc ggtttgcgcg gcggacaaat
      841 tggatttggt caaatgccgc gtcgaggcgc ataaggacgg tttcggtttt gccgtgccgc
      901 tcacgcccgc caaagacggt gattttgttt tgtatgaacg ccagatgcgc ggcattatgc
      961 acggcgatat tgtcactgtt cgtcctgccg gcatcgaccg taggggccgc cgcgaaggga
     1021 cagttctgga tattgtcgaa cgcgcgcaaa gcaaagtggt cggccgtttc tatatggata
     1081 ggggcgtggc gattttggag ccggaagaca agcgtctgaa ccaaagcatc gtattggaac
     1141 cggacggcgt ggcgcgtttc aaacctgaat ccggtcaggt catcgtcggc gaaattgagg
     1201 tttatcctga gcaaaaccgg caggcagtgg caaaaatcat cgaagttttg ggcgattatg
     1261 ccgacagcgg catggagatt gaaattgccg tgcgcaagca tcatttgccg caccaattca
     1321 gtgaagcgtg tgccaaagcc gtgaaaaaaa ttcccgacca tgtacgcaaa agcgatttga
     1381 aaggccgcgt cgatttgcgc gacctgcctt tggtaacgat tgacggcgaa acggcgcgcg
     1441 attttgacga tgcggtgttt gccgaaaaaa tcggacgcaa ttaccgtctg gtcgtggcga
     1501 ttgccgatgt cagccattat gtccgccccg atgacgctat cgacacggac gctcaggaac
     1561 gcagcaccag tgtttacttc ccgcgccgcg tgattcccat gttgccggaa aacctgtcca
     1621 acggcatctg ctcgctcaat cctaatgtcg agcgtttgtg tatggtgtgc gatatggtca
     1681 tcacttacgc gggcaatatt aaagaatacc gcttctaccc cgccgtgatg cgctctcatg
     1741 cccgcctgac ctacaaccaa gtttggaaat ggctttcagg cggcatcggg catccgttca
     1801 aaacacaaat cgacacgctt tacaaactct tcaaaatcct tcagaaaaag cgtttcgaac
     1861 gcggggcggt ggagtttgac agcatcgaaa cccaaatgct tttcgacgac aacggtaaaa
     1921 ttgaaaaaat cgtccccgtt gtccgcaacg atgcccacaa gctgattgaa gaatgtatgc
     1981 tggcggcgaa tgtttgcgcg gcggattttc tgttgaaaaa caagcatacg gctttgttcc
     2041 gcaaccattt gggccccacg cccgaaaaac tcgccaccct gcgcgagcag ctcggtctgt
     2101 tggggcttca acttggcggc ggcgacaacc cgtcgccgaa agactatgcc gcgcttgtcg
     2161 aacaattcaa aggcagacct gatgccgaat tgctgcaagt catgatgttg cgctccatgc
     2221 agcaggcggt ttacgaaccg cattgcgacg gacactttgg tcttgcctac gaagcatacg
     2281 cccacttcac ctcgcccatc cgccgctatc ccgacctgac cgtacaccgc gccatcaaag
     2341 ccgtgttgaa tcagcaaacc tacacgccaa aaaaaagctg gcaggctttg ggcgtgcata
     2401 cctcgttctg tgagcgccgt gccgacgacg ccagccgcga cgtggaaaac tggctgaaaa
     2461 cctattatat gcgcgataag gtcggcgaag tattcgaagg taaaatctcc ggcatgacca
     2521 gttttggtat ctttgtaaca ctggacggca tccacattga cggcttggtg catatcagcg
     2581 atttgggcga agactatttc aacttccgcc ccgaaatcat ggcaatcgaa ggcgaacgca
     2641 gcggcatccg tttcaacatg ggggacaggg ttgccgtccg ggtcgcccgt gccgatttgg
     2701 atgatggaaa aatcgatttt gtcctgattg ccgaggggag cggcaggggg cggaaagtta
     2761 aatcatccgc gtctgccaaa ccggcaggga cggcggggaa agggaaaccg aaaaccgccg
     2821 ccgagaaaaa aacagcccga ggcggcaaag taaggggaag gggcgcgtct gccgccgcag
     2881 aatcggggaa aaaggcaaag aaaccggttc cgattaaggt aaaaaaacgg aaaggcaaat
     2941 cataatgctg acggggtggc ttggggaggg cggggcatac tttcccgaag ccgccgcccg
     3001 attttttgat atggcggccg gcgcatcatt tcaggccaat cgaaacgccc gtattgaaag
     3061 attgcgttta tttccaccgc cgttttaaag gccggcggta ttcggcagac ggggcgcaaa
     3121 cggcgttcag acggcatttt cattctttcg gcgtgtccgt ccgaattgct ttgcccgtcc
     3181 gcgcaatcag cccgtgcggc ttgccttgaa cggacaaaaa atgccgtctg aaacccgaaa
     3241 atcaggtttc agacggcatt ttgccttgaa aaggctgttc aaatcagcgg tggtagttcg
     3301 gtgcttcttt agtgatttga acgtcgtgaa cgtgcgattc gctcatacct gcggaagtga
     3361 tttccacaaa ttcggctttt tcgtgcattt cggcaatatt ggcgcaaccc aagtaaccca
     3421 tactggaacg cagaccgccg gtcagctggt ggatgatgtt cacaatcggg cctttgtaag
     3481 gaacgcggcc ttcgatgcct tcggggacgt atttgtcggc gctgtcggtt ttgtcttgga
     3541 agtagcggtc ggcagaacct tggctcatcg cgcccaatga acccataccg cgataggatt
     3601 tgtaagagcg gccttggtag agttcgattt cgcccggtgc ttcttccgta ccggcaaaca
     3661 taccgccgag catgacgctg tatgcacctg ctgccagagc tttggcaata tcgccggaga
     3721 agcggatacc gccgtcggca atcaggggaa cgcctgtacc tttcagggct tcggaaacat
     3781 tgtgaatcgc agtcagttga ggtacgccca cgccggccac gatacgggtc gtacaaatcg
     3841 agcccgggcc gataccgact ttaacggcat ccgcacctgc agcgaccaaa tccaaagcgg
     3901 ctttggcagt cgcgatgttg ccgccgatga cttggatgtg cggataagtt tctttaaccc
     3961 agcgcacgcg atcgataacg ccttggctat gaccgtgggc agtatcgacc acaatcacgt
     4021 ctacgccggc ttctaccaat gctttgacgc gctcttcggt atcgccgcca gtacccaccg
     4081 cggcaccgac gcgcagacgg ccttcggcat ctttgttggc attagggaat tcggttgttt
     4141 tcaaaatatc tttaactgta atcagacctt tgagttcgtc ttggtcgttc aacaccaaaa
     4201 cgcgctcaac tttgtgcgca tgcatgattt cgcgggcttc gtcgatgctg gtaccttcag
     4261 gtacggtcac caaacggttg cggggggtca tgatggcaga aaccggcaga tcgacacggt
     4321 tttcaaaacg caggtcgcgg ttggtcacga taccgaccac tttgccgttt tcaacaacag
     4381 gcagaccgga cattttgcgt ttgcgttgtg cgcgcatttc caagacttcg cggatcaatg
     4441 cggtcggcgc aacggttacg gggtctttga ccacgccgct ttcgtggcgt tttactttgg
     4501 aaacggcgcg cgcctgcatt tcgggcggca tgtttttatg gatgatgccg atgccgcctt
     4561 cctgtgccat cgaaatggcg aggcgcgcct cggtaacagt gtccatcgcg gcggaaagca
     4621 gggggaggtt gagtgtgatt tcgcgggtga gcttggtttg aagtttaacg tctcgcggca
     4681 gcacggtcga atgtgcggga accaacaaaa catcgtcgaa agtataggct ttttctacga
     4741 tacgcataat gctcggtctt tcagtttgtg caagatgcac ggcattatag cacgttaccg
     4801 gcggcttgac agtttatatt gtttgcaata tcccccgcct tcagacagcg tacggcgcgg
     4861 cggcgggata ccgtctgaaa accggcaggg tgcttatgtc aactgttcca gcaaagcctg
     4921 cttcaatgag gactggattt ttgggttttt caggtcgggg ctaaaaacgg taaaactgtc
     4981 ttcggcgcgt tcatccagtg tggagatttt ggcatagcgc aggctgacgt tgtgggcgaa
     5041 aaagacttcc gccatatcgg cgagcaggaa ggggcggttg acggcggtaa tttcgacgga
     5101 gtaccagtcc ggatagtctt cttcgggggt gatggtgatg cttggcgcga tcggcatgta
     5161 gcggctgcgg cggctgatgc ggcggctatg gctggagatt tcggcaacgg tgtgtccgtg
     5221 gataaagctg ttgagttcgg cttcgagcgc gctttggatg tcggggtagt cttcgggagc
     5281 gtgctgcgag gggatttgca cgatgaaggt gtcgaggatg tagtcgtgtt cggtaataaa
     5341 ggcgcgggcg gcgaggatgt cgaagccgtg gcggctgaag atgcggcaga ggcgggcgaa
     5401 caggcgcggg ccgttgggca tgaaaaccat gacttgaaag ctgtcgcttt tgggcaggat
     5461 gcggctgcgg acgatggggg tttcaaagtc gtggactagg ttggcggcgt gccacaggat
     5521 ttcgcgggac tggtggcggg cgaagtaggc ggaaccgagc gcgttccata gttttttctg
     5581 ctgtttttcg gggacggcgg cgcgggtgag taagtcggcg gcttcctgcc ggcggcggcc
     5641 gaagagggtg tgcgggttgc cgccgttgcc tgtaaggtag cgtccggcgg catggaagag
     5701 gctttccagc aggctggcgc gccatgcgtt ccacagcttg ggattggtac cgcgtatgtc
     5761 ggaaatggtc agaaggtaga gcgcgctgag gcgttcgtgg gtttggacgc gtttgcagaa
     5821 ggcatcgagt acgtcggggt cttggatgtc ttctttttgg gcgacgatgg acataagaag
     5881 atggttttcg accagccagg caagcaggtc gctttcttct tcggtcagga agtggtcggc
     5941 ggcaaattgg cgcgcgtctg agatgccttg tatggcatgg tcgccgccgc gtcctttggc
     6001 gatgtcatgg aaaaaggcgg caaggtagag gatgtcttgt ttttcaaagg actgcatcag
     6061 tgcagaggcg tagggcagct cgtggctgtg catatccaag gcaaggcggc ggacgttgcg
     6121 gacgacggcg aggatgtggt cgtccacggg atagatgtgg aacaggtcgt gctggagcag
     6181 gccgacgatt ttttcccacg cgggcaggta gcgtcccaat acgccgtaga ggttgaggaa
     6241 gcgcagggtt tgggtcagtc cgttgccgtt gcggaaaaag ccggcgaagc ggtggcggtt
     6301 ttcagaattt tggtagaagc tgcggttgat tttgcgcgtc gcgccccacc atgcgcgcag
     6361 ggtttgcggt tcgagcgcgg taatgtcgtt gcgctgctgc atgatttcga cgattttgaa
     6421 aatgtgttcg ggccgtctga aaaaaatatc ggtgtgccgc gcggcgattt ggttgttgac
     6481 ttggatgtag tcgtcgtcaa tccgcagggt aacgcgcaac ggggtggagg aaacgcggct
     6541 ttgcagcata ggcgtgagga tgccgcccag ttgtttgacg gttttaatcg cgcggtaaaa
     6601 cacgcgcatc agttcttcgc tttggcggcg gaggttcaag ccttcataac ccatgctttc
     6661 ggcgacttgc ggctgcaaat cgaacagcag gcggtcttcg gcgcgcttgg cgtttaaatg
     6721 cagatggatg cggatgtggg cgaggcggcg gtagccgtgc gaaagcatac cggcttcggc
     6781 acgcgtcaaa atccgctgtt tgagcaggtc gggcaggtcg gtcgccaagc cttgcgcctt
     6841 cgctatccaa agcagggtgt ggatatcgcg cagaccgccc ggacagcttt tgatattcgg
     6901 ctccaatact gcccccgaac cttgcgattt ggcgtggcgg tgttccatct ccaccagttt
     6961 tgcctcgaca aacgccgcca cattgcgctg cgcgttcatt ttttccgcta gtttatccgc
     7021 cgtttggcgg ttgccaaaca aaaacctagc ctctaaaaac gccgtgtccc ccgtaatatc
     7081 gtcgcgcacg ctttcgcaca gttcgccaac gctgccgctt tttacagacg gcatcagttt
     7141 gcagtcccac agggtttgga caaaccgggc aatctgttcc tgaatgccgt ctgaaagcgg
     7201 ggcaggggag acaaccgcca aatccacatc cgaacaggga tacagttcgc cgcgtccgaa
     7261 gccgcctacc gccatcaggc ataacgcgct gttttgaaaa tactctgccc acaatgccgc
     7321 cagtaaggtt tcgactgccg ccgtgtattc tctgaaaaat accgacacgc ggttggcttt
     7381 caaataatgc gcttcggcgg catcgcgctg ctgtttgaag gtttccagtg ctgaagacag
     7441 gtttgcaggc atttttattc tttcgattgg cgggaaaaag ggaggcggat ggttcggcgg
     7501 tcaaataccg ctttcagacg gcatttgtcg ggtatcggcg gaattggtca tcaggttcaa
     7561 ccgttcctgc ggcggcagca gcaactgata cgccgccacg cccaaagccg ccgccatttt
     7621 ttcgatattc gacagggcga tgttccagcg tttgcgttcg actgccgaca cataagtcct
     7681 gtccaaaccg cattgccgcg ccaattcttc ttgcgaccaa cccttgttca cgcggaaaag
     7741 ccgcatattg tatgccaata ccgcccgcaa atcctgttcg tcaggcagtt cggcaggcgg
     7801 ggtcaatttg ttgcccatca tttgcttcca gataaatggt taaaattaag catttgctgt
     7861 tacggatttt acttcacata aaagccaaaa aaaaggggtg gcggcagcca cacccaaaca
     7921 cacacacatc aagaggaaag aggtaaaatc aagacagatt gggaaacagc aaacaagcaa
     7981 tctagatttc atatcggtat tatcaaacaa aaaccgttat cgagtattga ttcaaatcaa
     8041 tttagatttt attcgcaaac cggcaaagaa aaacggcata cccgtttata cggatatgcc
     8101 gtctgatgat gcaggggact gctgtatttg gcagtggttt gtgttttagt cctcttgcgc
     8161 cgctgtttgc aggtagttcg gcaaaccaat tttgccgatt agttcctgct gggtttcgag
     8221 ccagtcgatg tgttcttcgt tggtgtcttt ttgtttttcc aacaaatcac ggctgacgta
     8281 atcctgttgc gcttctgctg tggcgatggc ggcaagcagg gcttcgtgtt tttcctgttc
     8341 tttggtcaaa tcgcaggcga tgatttcttc ggtggactcg ccaatcagaa gcttgcccag
     8401 ttcttgcagg ttcggcaggc cttcaaggaa cagaatgcgc tcgatcaaat cgtcggcagc
     8461 tttcatttca acgatggact gtttgaagaa atgttcgccc agttcttcaa agccccagtt
     8521 tttcaaaata cgggcgtgaa ggaaatattg gttgatggtt accagcagca agcctaagtt
     8581 tttgtttagc tcgcggataa ccagacggtc gcctttcata cggactcctt ttattccgaa
     8641 tacggattac agttggcttt ggtagtagtt gccttcgcca attaactcga tcaggcgaag
     8701 ctgctgttcc agccagtggg cgtggtcttc ttcggtatct ttcagttggg caaccatcag
     8761 gtcgcgcgta acatagtctt gagcctcttc gcacagtttg atgccttttt tcaacgcatc
     8821 acgtacttca tattcggttt gcaggtcggc tttgaggcag gaaaccacgt ccgtgccgat
     8881 attcagttcg gcgcgtgcca ttttcggcgt gccgcccagc atcaggatgc ggcggatgaa
     8941 gtcttcggcg tgtgtggttt cttcttccat ctcgtggttg agacgttcaa aaagtttggt
     9001 gtagccccat tcggagtaga ggcgggagtg gataaagtat tggtcgcgtg ccgccagctc
     9061 gccagacagc aattcgttca tataatcaac aacagcttga ttgccttgca taatatctct
     9121 ctttctgtaa cttggttttc ggtatgtctg aacagcatct gtgtcgctat tcgggatgcg
     9181 tgcattgtat gcaaaagctg tcggcatgac aaattttcta tttaaaatac aaacaattat
     9241 caaaagaaat agggcgtatt ccccgatgcc ttccaaatca gtatgctgtt tcttatcggt
     9301 tttttgtgct gttaaaacta agaatccata tcatccataa agaacattta cacttgttaa
     9361 ctatagcgaa aaacaaatag agcacggttt tttatcaaaa tttataatga atcgttctca
     9421 ttaaccgaca gattcttttg agattatcgg attttgggaa taaattatgc cgtttgaggg
     9481 gctttcagac ggcatagaca attaaagctg attaaacaac gcggcagaca gcagcgtagg
     9541 aaattatttt ttacttcgga acggtatttt gggtttaatg atgcccgcaa ccgccgtggc
     9601 tttcgcgtaa ggcttcggca gcctgttcgt cggcgtggta gctggaacgt accatcgcgc
     9661 cgatggcggc attgctgaag cccagttcgt atgcttcttt ttcaaagatt ttgaactgct
     9721 cgggcgtaac gtagcgcagg acgggcaggt gtccgtctga aggctggagg tactgtccga
     9781 tggtaatcat ttcgatattg tgcgcccgca tatcgcgcat aatttcacgc acgtcttcgt
     9841 ctgtttcgcc caagccgacc atgatgccgg atttggtcgg gatgtgcggc atcatttctt
     9901 tataacgttt taataagtct aaagaatgtt gataattggc accgggacgg gcttttctgt
     9961 acaggctcgg atgggtttct aggttgtggt tcatcacgtc gggcggggtt tcggcaagga
    10021 ttttgagtgc gatgtccaag cgtcctcgga agtcggggac gaggatttcg attttggtgt
    10081 tcgggctggt ttcgcggatg gctttgatgc agtcggcgaa atgctgtgcg ccgccgtcgc
    10141 gcaggtcgtc gcggtcgacg gaggtgatga cgacgtaacg caggttcatg gctttgacgg
    10201 attcggcgag gtttttcggt tcgtcggggt cgagcatatt gggccgaccg tgtcccacgt
    10261 cgcagaacgg gcagcggcgg gtgcagatgt cacccataat catgaaggtc gccgtgcctt
    10321 tgctgaagca ttcgccgatg ttggggcagg aggcttcctc gcaaacggtg tgcatctttt
    10381 gttcgcgcaa aatgtctttg atttcaaaga atttgcgcga tgggagtttg gcgcgtatcc
    10441 attcgggctt tttcagtttc tcctgaaggg ggacgacttt gatggggatg cgggcggttt
    10501 tgtccgcgcc tctgagtttg atgccgcgtt tggggtcgtc ggttttgatt tcactcattg
    10561 ttgtctgctt tcggtgtgaa ttgtgtttca aggtgtgcgg taagtttggc ggcgacttcg
    10621 tccggcgtgg ggcagggttg gacaaaatcc gcgatttgcg tcatttccat accggcgtag
    10681 ccgcaggggt tgatgtgggt aaacgggctt aaatccatat tgacgttgag cgcaagcccg
    10741 tgatagacgg agccgttttt gatacgcagc cccagtgagg cgattttgcg ttctccgaca
    10801 taaacgccgg ggcgtttggg gtctgccgcc gcttcgatgc cgtattctgc caatgtggcg
    10861 atgatgctgt tttcaagcgc ggaaacgatg ttgcggacgc tggttttgcg ccgtttgaaa
    10921 tcaatcatcg tataaacgac caattgcccg ggcccgtgat aggtaatctg cccgccccgg
    10981 tcgatttgga cgacgggaat gtcgtcgcga atcagcaggt gttcgggttt tcccgccagt
    11041 ccttgtgtga acacgggcgg gtgttcgacg acccacagtt cgtcttcggt gtcagcattc
    11101 cgtccggcat taaaggtttt catcgcttca aaagtcggca gatattcgac caaacctttg
    11161 tgtatgattt tcatctcaaa gtaccacttt gaccagttcg tgcgaagtca gcgcgcggta
    11221 gatgttgtcc aattgttctt ggttttcaac ctttacctga acggtggcgc cggtatagtt
    11281 gcctttgctg ctcggacgcg tggtgatgtg gtgcgcctgc gtgtcggggg cgtggaggcg
    11341 gacggtgtct aaaaccgcct gctcgaactc gggatgcacc gcgcccatta ctttcaatgg
    11401 gaaggtgcag ggaaattcga tgagggatgt tttgtttttt tgttcggtca tgatgtgctg
    11461 ccttgtcgtg tacggtatgc cgtctgaagg cgggtttgcc tttcagacgg catcggatgt
    11521 gcgttatttt agcctaaacc gcgataacag gctatcggga aggcggaggc ttttttgacg
    11581 gcgcggcggt tctgctatac tggcgcacaa tattattttt agaagggtgg tttttatgta
    11641 tcggaggaaa gggcggggca tcaagccgtg gatgggtgcc ggtgcggcgt ttgccgcctt
    11701 ggtctggctg gttttcgcgc tcggcgatac tttgactccg tttgcggttg cggcggtgct
    11761 ggcgtatgta ttggaccctt tggtcgaatg gttgcagaaa aagggtttga accgtgcatc
    11821 cgcttcgatg tctgtgatgg tgttttcctt gattttgttg ttggcattat tgttgattat
    11881 cgtccctatg ctggtcgggc agttcaacaa tttggcatcg cgcctgcccc aattaatcgg
    11941 ttttatgcag aacacgctgc tgccgtggtt gaaaaataca atcggcggat atgtggaaat
    12001 cgatcaggca tctattattg cgtggcttca ggcgcatacg ggagagttga gcaacgcgct
    12061 taaggcgtgg tttcccgttt tgatgaggca gggcggcaat attgtcagca gtatcggcaa
    12121 cctgctgctg cttcccttgc tgctttacta tttcctgctg gattggcagc ggtggtcgtg
    12181 cggcattgcc aaactggttc cgaggcgttt tgccggtgct tatacgcgca ttacaggcaa
    12241 tttgaacgag gtattgggcg aatttttgcg cgggcagctt ctggtgatgc tgattatggg
    12301 tttggtttac ggcttggggt tggtgctggt cgggctggat tcggggtttg ccatcggtat
    12361 gcttgccggc attttggttt ttgttcccta tttgggcgcg tttacaggac tgctgctggc
    12421 aaccgtcgcc gccttgctcc agttcggttc gtggaacggc atcctatcgg tttgggcggt
    12481 ttttgccgta ggacagtttc tcgaaagttt tttcattacg ccgaaaatcg tgggagaccg
    12541 tatcgggctg tcgccgtttt gggttatctt ttcgctgatg gcgttcgggc agctgatggg
    12601 ctttgtcgga atgttggccg gattgccttt ggccgccgta accttggtct tgcttcgcga
    12661 gggcgtgcag aaatattttg ccggcagttt ttaccggggc aggtaggcgg ttccgaaaca
    12721 tatttgaagc ggaatacaac cttgcccggg tttaaataaa aatgccgtct gaaccccgaa
    12781 aacagagctt cagacggcat tttcatcacg gcttatttgg cggttttgct gctgtcgata
    12841 attttcatac cggcagaaat caggctgccg atgtcggcaa cattggcggg cataatcagc
    12901 gtattgcttt ctttggcaag attgttgaac gcggcgacgt attgttccgc aatcttcaga
    12961 ttgaccgcat ccgcgccgcc ttgggtttga agggcggcgg caatttgacg gatggcttcg
    13021 gcattggctt cggcaacaag gcgcaaggat tccgcttcac ctttggcgcg gttgatgcgg
    13081 gcgattttct cggcatttga cgcattgacc gcagcctgag cctcgccttc ggattgttgg
    13141 atttcggctt cgcgctgacc actggcaagg ttgatttgtt cgattttacg accttcggat
    13201 tcggcgatac gggcgcgttt ttcgcgttcg gcagtaattt gcgcctgcat tgagcgaagg
    13261 atttcttgcg gcggaaccaa gtctttaatc tcataacgca aaaccttcac accccaagcc
    13321 ccggccgcct cgtccaaagc cgcaacaaca gtactgttga tttcgtcgcg ttcttcaaac
    13381 gttttgtcca actccatacg cccgataacg gaacgcagcg tcgtttgggc aagctgggta
    13441 attgccatga tgtagttgct cgaaccgtat gaggcgagtt tggggtcggt tacttggaaa
    13501 tagatgatgc cgtcaacagt cagctgcgta ttgtcgcgcg tgatgcagac ctggctgggt
    13561 acgtctaaag ggatttcttt cagcgaatgg cggtaggcaa cgcggtcgat aaagggaatc
    13621 aaaatattca aaccggccgt cagggcgcga tggaaacgcc cgagcctttc gacaacgtgg
    13681 acttcctgtt gtgggatgac aacaaaggat ttgaaaccga aaacggcaac ggctgccaac
    13741 aagataatga aaaattccat aattcctccg agtgttaagg ttttgcgatg ataagaaggt
    13801 tgccttcctt gcggacgatt agggcgcgcg ttcctggttc aagctcttct tgccccgtat
    13861 tttgcgcctg ccagtgcgta ccgcgataaa aaacttcgta acggttgccg cctgtgtgtc
    13921 ggaggatttc gacatattgt ccggcatcca aatcctgata tgaatccgtt tcaacttttc
    13981 taacggcggt tttggcgtgt acgaaccaaa tacccagcgc ggaaagcaga gcggcggtca
    14041 agacggcggc aggcgtgctg ccggtcagcc cgtaagcaat gcccgaaccc gccaaagccg
    14101 cgctgacaac caaaagataa accgttcccg tcaataattc gatgattaag acggcaacag
    14161 cggcaacaaa ccatacagtc atacatttcc ccacaaagcg cgtcgtttga caaaataacg
    14221 caatatcagc agtatagccg aatttgaaag gatagggcag atatggacac ttggcacgat
    14281 gcactcggcg gcgaaaaaca gcagccgtat tttcaggaaa ttttaaatgc agtcaggcag
    14341 gaacgtttgt cgggacaaat catctatccg ccggcggcgg atgtgttcaa cgcattccgc
    14401 ctgacagcgt tcgaccgggt caaagccgtc attctcggac aagatccgta tcacggggca
    14461 gggcaggcgc acggtttggc attttccgtc cggcagggta tccgcatacc gccgtcttta
    14521 ctcaatatct acaaagaatt ggaaaccgac atcgaaggct tttccatacc cgcgcacggc
    14581 tgcctgacag cgtgggcgga gcagggcgta ttacttctga acacggtttt gacggtgcgt
    14641 gcaggacagg cgcattcgca cgccctttta ggctgggaac gctttaccga taccgtcatc
    14701 aggcagcttg cgacacaccg caagcatctt gtctttatgc tgtggggtgg gtatgcacaa
    14761 caaaaaagga aactgataga cagtcaaaac catttgatat tgaccgcacc gcatccgtct
    14821 cctctgtcgg catatcgcgg ttttttcggc tgccgccatt tttcacaggc aaacagctat
    14881 ttgagccggc acggtatcga tccgataaac tggaagctgt gaatgccatc tgaatgccaa
    14941 gttgcttaaa ccccactgaa ggctgctttt gaaaccggaa acaaagtgat taaggaaaac
    15001 cggcccataa tgcaaaaccg tctgaatcct agggttcaga cggcattttt tgccgccatt
    15061 tccaaaaaca acttttgttc gcctgccgac aaatccgaca aagtcgtttg gttgagggct
    15121 ttggcaataa tttaacataa tatacattat gcgaactatc ggaaacagtt gtacgtgtcc
    15181 ctgtggtctt tccaagtagg aaaattaaag tatggacaat gcggctgaat gtatagcccg
    15241 gagcatccgc gtatccgaag gtactgaacg atatgccctg catccctttc gatgcttcca
    15301 tccagccggt attgggaaat acgttgacct tcaatataat atacaggcag ccgacacaca
    15361 ggatatgccg ctgctttttc atcatttctt ctgtcaaatc cttggaacag ttgatttgaa
    15421 aacacggctt tacatacgtc ccaattctct ttgcagtgct tggatatttt gctgcctgtc
    15481 caatacattg ctttgcaatg cgttgatttc ttgatggttg atgttgccgc cctttgccag
    15541 acgtgcttgt gataacattt tttgggcttc aaccaatgct ttgcgttcgt tgctcaattc
    15601 tgtttcgaga atggagcgtc tgctgttgtt tgagggtgct tgttgcggcg gcggcgtatt
    15661 ggattttgcc ggcttggata ctgttttgac cggggcttta tatttgacaa cctgtccgcc
    15721 gtttgacggt gatgataccg gttcgggcgt ttggggcggg atatagcgtt cgctgctgta
    15781 gttgccgatt gggggcaaat cggttgagtg gcagcttttg gacggcttgg tggtgtaaac
    15841 ggtttctccg ttgattgtgc aggtgtagat tttggccgca ttcgcaccca atgggcttga
    15901 aatcagggaa aagttgatta ggattaaggg gagttttgat ttcataatgt gcttgatgct
    15961 cggataatta tttgattttt tggtattttt tataatgctt tcttggcgtt ttacgggctt
    16021 ttcttttcgg ttgtttgctt ttgattttct ttcggggctt tggcagcctg cttgttcttt
    16081 ttcccggcag gttttttgtt tttcttttta ctttctatgt gtattttggc ttcttaactg
    16141 agttttttaa ttttcaggcg gtatccgcct ccctgatggc tgctgatttt aggtaaatcc
    16201 gcatcggagc acgatcctgc tggggctgat gtatatacgc ttttgccatt tgagttgcaa
    16261 tggtatacgg aggcttgcgc cgccgcgccg gaaagggaca ggagacccaa ggcggcaaaa
    16321 agtctgatgt ttataccggt aaaaggcggt gataacgccc gaattatacc gttattggca
    16381 ggcaaagata agcaccctgc ccgcgcttct ttatcgctcg gcaaactgtt tctcgatttc
    16441 agtttcaatc cgttccaatt cttcttgaca agccagccaa acctcttcga tttgggcaag
    16501 ttgtgttttg acttttgcca gctgggataa ggtattttgc aatttttctt tgtttgcttc
    16561 aaggtaagcg tcttcttgtg ctaaaaatgc ttcacatgcc gtctgaattt cggaaagctg
    16621 cgccatttct ttttcggcac ggtctatttt ctgctgtatc ggcttgccgc gtcgggcttt
    16681 ttcctgacgg atttgcgctt cgatgcgctt ggtgtctttg cggctttggc tttgtgcgga
    16741 tgctgcgggt gcggcggcgg cgttttcctg tgccaaacgc cattggcggt aatcgttcaa
    16801 atcgccgtcg aagttcttca gacggccttt gtcgatcagg aggaagctgt cggtagtcgc
    16861 ttcaagcagg ctgcggtcgt gcgatacgat gattaaggcg ccttggaaac tttgcagagc
    16921 gagcgtcagg gcgtggcgca tatccaagtc cagatggttg gttggttcgt caagcagcag
    16981 caggttcggc ttttgccaaa taatcatggc aagggcgaga cgggcttttt ctccgccgga
    17041 aaaaggttcg gttttctgca acgccatatc gccaacaaaa ttgaagccgc cgaggaaatt
    17101 tcggatttct tgttcgcgta cttcgggaga aagctgctga atatgccaaa cagggttttg
    17161 gtcggcgcgg atggtatcga gttggtgttg ggcaaaatag ccgatattga gtttttcgga
    17221 acggacgatg ctgccggaaa gcaaatcgat tttgcccgcc aaggctttga taaacgtaga
    17281 tttaccgctg ccgttgacac ccaatagccc gtagcgtgcg ccgctttcca gcgacagggt
    17341 aatgtcatgc agaacggttt ttccttcgta acccaaatca gcgtgttcta gctttaacaa
    17401 aggattgggc agatggtcgg gatggtaaaa ctcaaaggaa aactcgctgt ccagatgcgc
    17461 gggcgcaacg cgttctagct ttgccaaagc cttcatgcgg ctttgcgctt gaacggcttt
    17521 ggtggctttg gctttgaagc ggtcgataaa ggattgcaaa tgtttgattt gcgcctgctg
    17581 tttgacatag gcagcttgtt gttgcgcgag acgctgcgca cgttcgtttt ggtaaaaatc
    17641 gtaattgccg ccgtattgcg tgagtttttg ctgcgataat tcaatggttt gggtagttgc
    17701 cgcgttgaga aaatcgcggt catgggaaat gatgatttgc gtgcagggta aagaagcaag
    17761 gtggttttcc agccacaaga cggtttccaa atccaagtgg ttggtcggtt cgtcaagcaa
    17821 gagcaaatcg gcgcggcaaa tcagggcttg cgcaagattc aggcgcatac gccagccgcc
    17881 ggaaaaggat ttgacggggc ggctgtgttc ttcttgcgaa aaacccagcc cgttcaacaa
    17941 ttttgccgcg cgggccggcg cggtataagc gtcgatttct tccaatttag catgatattc
    18001 cgcctgcttc atgccgtcat tttgcgcttc cgcctgcctc aatgccgtct gaaaagcctg
    18061 caactcggca tcgccctgca aaacgtaatc caaagcggaa atatccaaat cgggcgtttc
    18121 ttgggaaacg gaagcgagcc gccagttttt cggaatcgag acatcgccgc cgtcctgagt
    18181 gatttcaccc ttgagtaagg caaacaggct ggatttgccc gtcccgtttt tgccgatcaa
    18241 accgacgcgc tgaccgggat tgacagtggc gttggctttg tcgagcagga ttttcaaacc
    18301 gcgttgcagg gtgaggtttt tgatttcaat cataacggaa acatcgtcgg gcggaaaaag
    18361 cccgtatttt acctgaaaat cagtgccgat gccgtctgaa acgggaaatt tacggctgaa
    18421 gccaagccca agccctgcgc ccttccgagt gcaggaaaac caatgtcctg aatgccgaat
    18481 cggtattcat gcattccacg ctgattccga ttcgggaaaa atccgccatg attttgggat
    18541 ggataaactc ctgagccgcg cccgtcccga taatcaatat ttccggatag tcaacaggtt
    18601 tgatgtcgga caacaggttt tccggagtca gatcggacaa ggttcggcat tgcgacaggc
    18661 agaccgaatc cttatgtaca agcacgggtt tatggaaact ttgccccgcc agccggattc
    18721 cgcccgcacc gcattcatat tccgcaaact gtccgtctat cggattttct tcaaacaaca
    18781 tttttttacc ccgtcgccgc atcatctaca ccgaaagggg tgcaaaatca gacaaattca
    18841 tgtaggattg gcagatttca tctgacccgc ctgccgattt cagacggcat ttgattcaaa
    18901 gtgcggcaca attatatcgg cagcggatat tttcgtcttt caatatttac atttcagtcg
    18961 gtttacaagg agacacaatg aagccagtaa acatcggtct tttaggttta ggtacggtcg
    19021 gcggcggtac ggctgccgtg ttacgggaca atgcggagga aatttcccgc cgtttgggac
    19081 gcgaagtgcg catcagtgcc gtatgcgact tgagcgaaga aaaagcccgc caaatctgcc
    19141 cgtccgcagc ctttgtcaaa gacccgttcg aactggtcgc acgtgaagac gtcgatgtag
    19201 tcgtcgaatt gttcggcggt accggcattg ccaaagatgc ggtgttgaaa gccattgaaa
    19261 acggcaaaca catcgttacc gccaacaaaa aactgctcgc cgaatacggc aacgaaatct
    19321 tcccgctggc ggaaaaacaa aacgtcatcg tccaatttga agcggcagta gcgggcggta
    19381 tcccaatcat caaagccctg cgcgaaggtt tggcggcaaa caggattaaa tccatcgccg
    19441 gcattattaa cggcaccagc aacttcatcc tctccgaaat gcgtgaaaaa ggcagcgcgt
    19501 ttgccgatgt actgaaagaa gcgcaggcac tgggctatgc cgaagccgac ccgaccttcg
    19561 acatcgaagg acatgacgcg ggccataaaa tcaccatcat gagcgcactg gcattcggca
    19621 cgccgatgaa cttttccgcc tgctacctcg aaggcatcag caaactcgac agccgcgaca
    19681 tcaaatacgc cgaagaactt ggctatcgca tcaaactgtt gggcattacc cgcaaaaccg
    19741 gcaaaggcat cgagctgcgc gtccacccta ccctgattcc cgaaagccgc ctcttggcaa
    19801 acgtcaacgg cgtgatgaac gccgtgcgcg tcaacgccga tatggttggc gaaaccttat
    19861 attacggcgc gggcgcgggc gcattgccga ccgcttccgc cgtggttgcc gatatcatcg
    19921 acatcgcccg cctggttgaa gccgataccg cccaccgcgt accgcatctg gcgttccaac
    19981 ccgcgcaagt ccaagcgcaa accatcctgc ctatggacga aattaccagc agctactacc
    20041 tgcgcgtcca agccaaagac gaaccgggca cgctggggca aatcgccgcg ctgttggcac
    20101 aagaaaacgt gtccatcgaa gcactgattc aaaaaggcgt gattgatcag accactgccg
    20161 aaatcgtgat tctgacccac agcacggtcg aaaaacacat caagtcggca atcgcagcca
    20221 tcgaagcact ggattgcgtg gaaaaaccga ttaccatgat ccgcatggaa agcctgcatg
    20281 actgagccga aacacgaaat gctgacgaaa gagcaggttg ccgcgcgcaa aaaagcaaaa
    20341 gccaaaatcc gcaccatccg catttgggcg tgggtcattt tggcgttgct cgctttaacc
    20401 gccctgctct cccaatgcgc gatgtccaaa ccgcaggcaa aacagaaaat tgtcgagtct
    20461 tgcgtgaaga atattccgtt tgccgaaaaa tggcaaaacg atttgcgggc ccgcggttta
    20521 gattcaaaca atacccgcct cgccgtcgac tactgcaaat gtatgtggga gcagcctttg
    20581 gacagattga gcgagaaaca gattagatcc ttcggcaaac tcggcgcaca agaacagctt
    20641 gacctgctcg gcggcgcaaa tgcctttgaa gcacgtgaca agcagtgtgt tgccgatttg
    20701 aaatcagaat aatgtggacc gataaaaaag ccgattcttt aaagaatcgg cttttttcat
    20761 aaaaaacggc ttacagtgcg tctttcaaag ctttgccggc gcggaattta ggcgttttgg
    20821 cggcggcaat ggtcagaggc tcgccggttt tggggttgcg gccttggcgt tccgcacgtt
    20881 cgcccacgta gaaagtaccg aaaccgacca aagtaacggt gtcgccttgt ttcagggcgg
    20941 tggttactgc attggtagtg gcatccaaag ctttttgtgc ggcggctttg gaaatgtcgg
    21001 cttcttgagc aatcgcttcg atcaattcag acttgttcac aatcagtccc ttcctgtctt
    21061 aaaaaatgat gaaatgcccg aatactcggg gtttgtactg cttgagcaac tttcgcttta
    21121 tagcaattct gaaattgccg tgtcaagcaa aaaatacgga atcaccctat ttgacaggct
    21181 ttcaggacga aaccgcattt ttacaacaca tttcctgcgt ttcaatgttt ggttgccctg
    21241 ctgcggggtt ttggttttga agcggattcc gccgccgctt ccgcaccaga aggttctgcc
    21301 caaggctcag gctggctttc caaacccaga gccaatacct cgtctatcca tttgaccgga
    21361 tggatggtca ggccggtttt cacgttttca gggatttctt ccaagtcttt gaggttgtct
    21421 tttggaatta aaacgtgttt gatgccgccg cgaagcgcag ccaacagttt ttccttcaga
    21481 ccgccaatcg gcaggacttc gccgcgcagg gtaatttcgc ccgtcatcgc cacatcggcg
    21541 cgcaccggga ttttggtgaa tgcagacacc atcgccaaag tcatggcaat gcccgcactc
    21601 ggaccgtctt tcggcgtcgc accttcggga acatggacat ggatgtcttt tttctcgtaa
    21661 aaatcaggag ccaagcccac tgattccgcg cgggagcgga caaccgacca cgctgcagac
    21721 acggattcct tcatcacatc gcccaactgg ccggtgcact gaatcacgcc cttacccagc
    21781 aatgctgcgg cttcgacggt cagcaattcg ccgccgactt ccgtccacgc caaaccggtt
    21841 acttgtccga tacggttttc gctttcggca acgccgtaat cgaagcggcg cacacccaaa
    21901 tagtcgtgca gatttttctc atttacttta accgccctgg gcttggcttt tccggttttt
    21961 ttggtttttg agtcttcgtc caaggtaatc tgcatcacca ccttgcggca gattttggca
    22021 atctcgcggt cgagcgaacg cacgcccgcc tcgcgggtgt agtaacggat aatatcgcgc
    22081 accgcgcttt cttcgattgc caattcccct tcttttacgc cgttgcgctt catttgcttc
    22141 ggcacgaggt actgcatcgc gatattgatt ttttcgtctt cggtatagcc ggacagacgg
    22201 atgatttcca tacggtcgag cagcggtgtc gggatattca ggctgtttga agtcgcaata
    22261 aacatcacat cgctcaaatc gtaatccact tcggcataat gatcggcgaa cttgttgttt
    22321 tgctcgggat caagcacttc gagcaacgcg ctggcgggat cgccccggaa gtcgctaccc
    22381 aatttgtcga tttcgtcgag caggaacaat gggtttttta cgccggcttt tgccatattc
    22441 tgcaaaatct taccgggcat ggagccgata taggtgcggc ggtgtccccg gatttcgctt
    22501 tcgtcgcgca cgccgcccaa agccatgcgg acatatttcc gccccgttgc tttggcgatg
    22561 gattcgccca aagaggtttt gcccacgcct ggagggccga ccaggcacag aatcgggcct
    22621 ttgagtttgt ccatacgttt ttggacggcg aggtattcca aaatccgttc tttgactttt
    22681 tccaggccgt agtggtcggt atccagcacc aatccggctt tggcgatgtc tttgctgacg
    22741 cgggattttt tcttccacgg cagttcgagc agggtgtcga tgtagttgcg tacgacggtg
    22801 gattcggcag acatcggcgg catcattttg agttttttca gttcggacag gcatttttct
    22861 tccgcttctt tgctcatccc cgcctttttg atgcctgctt ccaaggcatc cagttcgccg
    22921 ttttcgtctt cttcgcccaa ttctttgtgt atcgctttaa tctgttcgtt cagataatat
    22981 tcgcgctggg atttttccat ttggcgtttg acgcgtccgc gtatgcgttt ttcggcctgc
    23041 ataatgtcga gttcggattc cagctgtgcc agcaggaatt ccatccgttt gccgatttcg
    23101 ggaatttcca aaatctgttg gcgttgcgcc agtttcaact gcaaatgcgc tgcgaccgta
    23161 tcggttagcc ggctgttttc ggcaatgccg ttaatgctgc cgataatttc ggcggggatt
    23221 tttttattga gtttggcgta ttgttcaaac tgcgccaaca gggtgcggcg cacggcttcg
    23281 aggtcggtat tgccgcccgt gtcttcttcc acgaccgtct ctatatggga aacgaacaga
    23341 ccgcccgtgt cttcaatggt cagaacacgt ccgcgataca gcccttcgac caatactttt
    23401 accgtgccgt cgggcagttt caacacttgc aggacttgtg cgaccgtacc ggtctgatac
    23461 aggtcggcgg caaccggttc ttctaccgcc gcatcggttt gcgccaacag gaaaaccggc
    23521 tcctcgcggg taatggcgtt ttccagtgcg gcgatggatt tcggcctgcc gacaaacagc
    23581 ggcagaacca tatgcgggta aacgacgaca tcccgcaaag gaagggttgc caaggcggca
    23641 tattcctcaa aatgcttttc tttttgtgtc ataggtactc tcttgtgtct gacagattgc
    23701 cgattttcgc gtacattggg gttgaaggta ttatttcaag catatgtggt ttatttatgg
    23761 agtttgatgc gatgccgtct gaaacattcc ggcttcagac ggcatgggct tggaaagaca
    23821 aggcgggaac aaaaaactgt tctgtgttgc cgctccttgc tgtaccatcc gtatggtttg
    23881 cggttctgcc gccctatttt caaaacatga cgcaggtatt ccatgtcttc ttttattttt
    23941 cccgataacg ggttcgaatg gcgcaacgaa agtctgcaaa agccgcccaa aggttggcat
    24001 tatgtccgcg aaagtggtgc aaacggcatt ttgaaggctg cctatcaaaa tattgcaact
    24061 gtctggcagg gcgatttcca caatgccaaa caggtgcttt ccgcaatgaa gaagaaggtc
    24121 cgcaaacctg ccgccgtccg ttccgatgcg gatattgccg cccttttcca cgcccaccgt
    24181 atgaagcagg cgcagcagag ccgtattctg aatatgcttg ccgttgaaat ccgccccggt
    24241 tttgtgttgg acaacaaacg cgcgcccgat atacgcgccg ccctgctcga cgtgtacgga
    24301 gaggcggacg gcaaaccgtt tttcctgccg ctcaatctgc tgctggggtt tatgggtgcg
    24361 cacgagtggc ataagaaagg ggttgccgtt ccgcagctgg gcggcagcat acacgttcct
    24421 ttcggcgtat tctcgccgtt gcgcggcgaa tacctcgacc tgctcgccca tgcgccgtca
    24481 acgggttttc agacggcatt cgatatcggg acgggctcgg gcgtgcttgc cgccattttg
    24541 gcgaaacagg gcattccttc cgtcatcggc acggatacca atccgaaagc cgtcgcctgc
    24601 gcccgtgcca atattgcccg tttgggcttt gaaaaacagg ttgagatacg ggaaaccgat
    24661 ctgtttcccg aagggtttgc cgacctgatt gtctgcaatc cgccctggct tcctgccaag
    24721 ccaacttccg ccgtcgaatc cgcgttatac gaccccgaat ctgcgatgct ggctgcgttt
    24781 ttgcgggatg cgccgaaaca tctgaatccc gatggagaaa tccgtctgat tatttccgac
    24841 cttgccgaac atctgcacct gcgtccgtcc gattttctgg ataaggcatt tgctcaggca
    24901 gatttgcgcg ttgcggatgt tttgaaaacc aaaccggttc acaaaaaagc tgccgacccg
    24961 gacgatccgc tggcttttgc ccgaaacagg gaaactactt tcctataccg tttgaaaaag
    25021 gcataagggg ctgcggtgcg cttccggcgg caggcatcgg aacgcccgcg ccgccggcac
    25081 ggcatcattc gggcggatta ttcttgtgaa aatacccgct cgagcatact gcccaatgcc
    25141 gtctgacgcg ttttgacggt ggcggcagct tgccggaagg cttcttcccc gccgaagaat
    25201 acgaacttct ctctcgcgcg ggtaatggcg gtatataaca gctccttact caatccggac
    25261 aatgcatcgt ccccttcgtc cgaaggtgcg gcggaaggcg gcagcagcca gacttcccgg
    25321 tattccgaac cttggctttt gtggacggtc atggcgaatg cgggttcaaa ttcgggcagg
    25381 cagcttaccg ctaccttttt aaatccgtcc gcatcggcaa aataggcggc aaggctgccc
    25441 tgccgtccga catcttccat aatcagtccg atgtcgccgt tgaacagttc aagcgcgtag
    25501 tcgttctgcc tgatcataat cggctctccg gcaaaatatg ccaaatgttc cggtatgttc
    25561 attttgcggc gtacatggcg gcaataggct tcgttgaagt cttccgcatc ctgccgccaa
    25621 gctgccagaa ccacgatatc cgaaatgccc gcgtatgcgg cttcgatatt gccgtctttt
    25681 accgcctgcc aataggcttt gtgtgcccgg tacaaccttt cgactcgagc gttcggactg
    25741 cattccgaat gttccagttc gtccggaaac cggtcaaaca atgcccacgc cccttcatcg
    25801 cccgatacgg cggcacgggc aaggcagccg atgccgctgt tgtcgccgaa gcggtggctg
    25861 aacgacagat gggcggtgtt ttgcgccaac acgggtggat ttgcgctgac gctgaaaccg
    25921 tgttccggaa ggaagccggc cagcctttgg tgcgtttctc cgtccaaaac ggttttttgt
    25981 gacaaaacgg acagcaccgc ccctattccg acggacggga gctggttttc atcccccagc
    26041 agaatcacgc gcgcgccggt tttgaccgct tttaaaagtt gcagcatcaa tgccgtatcc
    26101 agcatagagg cttcatcgat aaccaatacg tcaaacggca gcgggtaaac agggttgaac
    26161 gccgcctgca ttttgggcgg gcgcagcttc agcagtcggt ggacggtttg cccttccagt
    26221 ttgagcaaat ggcggcggac ggcctccggc gcgtcaaaac cgttgattgc acggtgcagc
    26281 gcgcgcgcca tatgtgccgc cgctttgccc gtcggtgcgg caagcgcgat gttgggaaga
    26341 ttttcgtctt caccgcaaat cagcgccagc agtttggcaa ccgtcgtcgt tttacccgtc
    26401 ccgggtccgc cggtaatcac cataaaaggc tgcaacagtg ccaaggcggc ggcatcgcgc
    26461 tgcccttcgc tgcccgtgcc ttgaaaccat tttgcgaggt tttgccgcgc gcctgccgcg
    26521 tcgggggcgg acgtgtcggc tgccgccaag cgttttatct cggcagccaa atcgtattcc
    26581 aactgccaca tcctgcccaa aaacagcctt ctgccttcca aaatcaaagg cgcggcggat
    26641 gttccgacca cgggtgcgag tgccgacagc gcgtcagcct cgccaccgct caaacggata
    26701 aacgaatgac cgttttgcaa tgcctgaaac aggcgttcgg tgcagtttgc aagcacttcg
    26761 ctgcctgaac ccgcatagcg tgccaaaaac cagattgccg cccttgccgc cgcttgggca
    26821 aattcatctg tctgccgttc cattgtattc cttgtcgaaa tgccgtctga aggcgtgggg
    26881 cttcagacgg cgcggtgttg tttcggctgt ttaggcgttt gcgccctgtt tggggtgcag
    26941 gctgccgtct ttcatgacca tcacgcgctc gaagcggccg gcgagttcgt cgtcgtgcgt
    27001 tacgaccacc agccccgttc ccaattccgt tttcagttcc agcatcatat ccaaaacatt
    27061 cctggcgttc gcacggtcga ggttgccggt cggttcgtcg gcaagcaggc attttggttg
    27121 cgtaaccaag gcgcgcgcaa tggcggcacg ctggcgttcg ccgccggaca gttcgcccgc
    27181 gcggtgcgtc gaacggtgtt tcagtccgac cttttccagc atcgccattg ccgtttctgc
    27241 tgcctcttca cggctttttt tgccgatcag aagcggcatc atcacgtttt ccagtgcgga
    27301 aaactccggc agaagatggt ggaactggta cacgaaaccg agatggcggt tgcgcaggat
    27361 gcccagttgt cgctggctta atgtacgcaa atcctcgccc atcagcagca acctgccttc
    27421 agacggcata tccagcccgc ccagaatatg cagcagcgtc gattttccgc tgcccgaaga
    27481 accgatgatg ccggtgcttt cccccgcgcg gatttccaaa tccaagccgt gcagcacccg
    27541 aacgtccaaa ccgccgtcgc ggtagcgttt gcccacgcct tcgcatttca aaatcaactc
    27601 actcataacg caaagcctcc gccggttggg tttttgaggc acgccagctc gggtagagcg
    27661 tggcaacgaa agacagtccc aaggaaatgc aggcaatcag ggcaacgtcg cccatatcga
    27721 catcgctggg caggtagtcg ataaaataaa cctgcgaatt gataaggtgg acaccgagca
    27781 ggttttcaaa aaacgccacg accctgccga cgttccaacc caaaagcacg ccgcagacca
    27841 cacccgccag cgtgccgaaa aagcctgaaa acgcgccctg caccataaaa atcttcatca
    27901 cgccgccagg ggaaagaccc aaagtccgca aaatcgcaat gtccgcctgc ttttccgtaa
    27961 ccgccatcac caaggaagag acaaggttga acgccgccac ggcgataatc agcgtcagga
    28021 tgatgaacat catccgtttt tccaactcga ccgcctcaaa atagctgcgg ttgttgtacg
    28081 tccaatcgcg cacccaaacc gcgtcccttt gcgcctccgg aatcagtgtt gccgtcaagg
    28141 cgggggcgtt ttgcgggtcg gcgagtttca gccgcagccc cgcaacttcc ttatccaagc
    28201 ggtacagtac gcgcgcgtct tggatatgcg tcatcgccaa tgaattgtca acctcgtaaa
    28261 cacccgtttt aaccagaccg accacggtaa actgtttcaa cctcggtacg actccggcag
    28321 gggtaacgtt gccctccggc gtgatgacgg taactttatt gccgacttcc gcccccaaag
    28381 cctccgccaa gccgacaccg aggataatgt caaactcgcc cggaatcaga tcttcaaatt
    28441 tgcctgccgg cattttgtcg ccgtattcca ccactttgcg ctcttcagac ggcaaaatgc
    28501 cgcgcatctg cacgcccctg atttcgcccg cgtttgccag cagagcctga ttggaaacat
    28561 agggcgcggc agccaaaata cctttgcggt tttcggtaaa ccgaagcagg ttgcgccaat
    28621 ccgtatccgt attgtcgata tagccgattt cggcgtgcgg cgcgacattc aggagctgcc
    28681 cgcgtatttc tttctgaaag ccgttcataa ccgacaagac gacaatcagc gcggttacgc
    28741 ccaaggcgat tccggcaatc gaaaccatcg tgataaacga cataaagccg ttgcgctttt
    28801 tcgccctgag atacctcaag cctatccaag cctctagaga aaacataacg ctaccttaaa
    28861 aatgtctgca aacgtgccgc cccggacggc ggtttggggg cggcggcaaa agtttattgt
    28921 accgtaaaac ccaggcagcg tccgaacgcc cgagtgcggg ggacggggcg gcagagcggg
    28981 cggaaaactt gcacaacgcg tcaaactgcc ctatcctttc cttcagaaaa accgtttctt
    29041 gaggaaaaca atgaatatcc gaactgcttt tgctttgtgc gccatcgcct tatccgccgc
    29101 tgcggctgcc tacgccaaag aaatcaaaat cgatgccaac aacacgcctt attccgaagc
    29161 cgacgcgcaa aagctggcgg caacggcagt cggtatgggt gttaaggaac ctatcagcct
    29221 gaacggcggc agcgacagca ttaccgtgtc cggcagcagc gcgacgcagt gcgtgttcaa
    29281 agtcggcaac ggaggcgcat tgcagattca agggctaaac tgcaagtaaa ccgcccggaa
    29341 aaatgccgtc tgaaggcttc agacggcatt ttgcattggc ggcgttatgc cccgccttct
    29401 ttaatcaggc ggcgttcgta caccgcctgc gccagcgttc ccgcatcgac atattccaat
    29461 tcgccgccca agggaatgcc ctgcgacagc ctgctgactt tgtaaggcag gtttttaaaa
    29521 aactcggaca ggacatacgc cgtcgcattg ccttctgcgg taaaagcggt tgcaataatg
    29581 atttcttcga cttccccgcc gcccagccgt tgcgccagcc tgtccaatgc gatggcggat
    29641 acgtccattc ccaatgccgt attgatttgc cccatcagga cgaaatacag cccgtcgtgg
    29701 cagtttgccg cttccatatt cgacacgtcg gcaggcatat gcaccaccat cagccgccgc
    29761 ccgtcgcgtg tttcatcggc acaaatatcg cacaatccgc cttcgcaaaa cgtgttgcac
    29821 atcgcgcaat ggtaaacctg cttcaatgcc gtctgcaagg catccaccag tttttcagcc
    29881 tctttgcgct tgtgttggag caaatgatac gctatccgct gtgccgattt cggcccgacg
    29941 ttgggtaaaa ccttcagcgc gtcgatcaat ccttggaagg catcttgttt tttgtggctc
    30001 atcatattcc gccgtatggg aaaacggccg gaatattccg accgttattt tgtcaacaaa
    30061 agtgtcaatt actgaccgtc gccgttgtcg accgattgcg ctcctttggt ctgtttgatt
    30121 ttgccgttga aataacgtat caacaagtcg aaagtattgg cagactgctg ttgcgccaaa
    30181 gcctgttttg caagcggaag ctgtgcggcg atatcatccg gcggggttac agcctgtact
    30241 tcgacaatca cgggtgccgg cagaccgatc agcctgacgt aggcgggttt gccgtttgcc
    30301 ggttttgctt tcagcagttc cgcataagcc tcgggcggca tggactgcct tgcctgctgt
    30361 gcgcccaaaa cggacacttc cgaccatttc acgtcaacag ccttgccgcc gttcagttgg
    30421 gtaagcacgt cttttgcctt gttttcggca agtttggcgg cttcggtacg gatataagcc
    30481 tgacgtaccg cgtctttggc ttcggcaaac ggcagggttt tctcttcgcg gacttctttg
    30541 gcgcggacga cccacgcggt ttcgctgttg atggtcagca cttcggaatt gtgttttttc
    30601 ttcaatacgt cgtcgctgaa aacggcattg atcaggtttt cgggcatacc ggacatttgc
    30661 gcatcctgcc tgctcagcca agtttcttgg gtttcgactt tcaaaccgct gtttttggcg
    30721 gcttcggcaa gcgaggaagg atggttgaac gcgtcatcgc ccagcttttc ttttgcctta
    30781 ttgaagtcgg caaccgcctt tttcattttc aattcgtttt ctacggcggc tttttcctgc
    30841 tcgaaagaag gtttggcttc atttgccggc aaacgcgcca cgcgctcttc aaacgcattt
    30901 ttcacttctg tttcgctgac ggtctgtttg tctgcaaagt ctttcagatt caaggcgaca
    30961 tattccaatt tgaccgcttt gggaagcagg tagtcttttt tgtttgcgtt ataaaacttc
    31021 tgcaaatcgg cttcagacac tttgacttgg gcgatgaatt cgtcggggtt gaaagtgtgc
    31081 gaacggatgg tgcggttgac ctgcgtcagc ctgatcagct gttccgcctg cgcgtcgccg
    31141 accaatacgc cgttttggac gaggtttacc aaattctgca aggcaaactg atcgcggatt
    31201 tcttcgacaa actggtcttc agacatatga cgttgggaaa ggtagcggtt taaaagcgcg
    31261 tggtcgaatt tgccgtttgc gtcgtggaaa ttgggatcgt ccacgataat ctgcttgatt
    31321 tgttcggaag aaaccgaaat gcccatcagc ttcgcgccct gtttcaggta ggcgcgttgc
    31381 agcagggatt ggaacaccgc gtcgcgcgaa gggctgccgc cgtccgcctg ttcattttgc
    31441 atagcgttgt tgatggagtg gtcgctgatt ttttcgtcgc ccacttggac gatgtagtcg
    31501 gcacccggat gggataccgt gctgaccccg aagccgacga aggttaatgc aatcagcccc
    31561 aaaaggactt gggcgggcgt tctgtatttt tcgatggaat ggaacatatt ttcagattgg
    31621 aaatgggatt gggaaattca agtcgggtat tgtaacggtt tttatccctg tctgcacggg
    31681 gcttgccgct tgaagatgcc gtcgtaggtt tcttcgctga agccgacata aaccctgccg
    31741 ccgcactcca atacgggacg cttgatcagg ctcggcattt cggacatcag tttgacggcc
    31801 tccgccgtcg aggacagcac tttttgctgt gttccggcat caagtttgcg ccagctcgtc
    31861 ccgcgtttgt tgagcagggt tgccaaaggc acttgttcca gccacgagca gatttccgct
    31921 tcagacggcc tctgtttttt aaaatcccga aattcaaact ccaagccgta tccggcaagc
    31981 ctgtttttgg cttttttgac tgtgtcgcaa tttggaatgc cgtgaaggat tatcatttgg
    32041 aaaccttttg tctgaaataa taaaacggat attttactat aagtgtctga aaatttgccc
    32101 gtctgtttca gacggcgggg cggttatgtt acaatccgaa aattcgaaaa atttaatctc
    32161 ttgttcaata aaggctttac caatcatgat ttctaccaac ggcatcacca tgcagttcgg
    32221 cgcgaagccg ctgtttgaaa acgtatccgt aaaattcgga gaaggcaacc gttacggcct
    32281 gatcggcgcg aacggttcag gcaaatccac cttcatgaaa atcctcggcg gcgatttgga
    32341 acagacggcc ggcgaagtgg cgattgaaaa cggcgtgcgt ttgggtaaat tgcgccaaga
    32401 ccagtttgcc tacgaagaca tgcgcgtgct ggacgtggtg atgatggggc ataccgaaat
    32461 gtgggcggcg atgaccgaac gtgatgcgat ttacgccaat cccgaagcca ccgaagacga
    32521 ctacatgaaa gccgccgaac tggaagccaa gttcgccgaa tacgacggct acaccgccga
    32581 agcgcgtgcc gccgaactgt tgagcggcgt gggcatttcc gaagatttgc acaatgcgaa
    32641 aatggcggaa gtcgccccgg gcttcaaact gcgcgtattg ctggcgcagg cgctgttctc
    32701 caagccggat gtattgctct tggacgaacc gaccaataac ttggacatta ataccatccg
    32761 ctggttggaa ggcgtgttga accaatacga ctccacgatg attatcatca gccacgaccg
    32821 ccactttttg aacgaagtct gcacgcatat ggcggatttg gactacaaca ccatcaccat
    32881 ctatccgggc aactacgacg actacatgct cgcctccgcc caatcgcgcg aacgcgccct
    32941 gaaagacaat gccaaagcca aagagaaact gcaagagctg caagagttcg tcgcccgctt
    33001 ctctgccaac aaatccaaag cccgtcaggc aaccagccgt ctgaaacagg ccgacaaaat
    33061 caaatcggag atggtcgaag tcaaaccttc cacccgtcaa aacccgtata tccgttttga
    33121 agccgatgaa aaagccaagc tgcaccgtca ggctgtggaa gttgaaaaac tggcgaaact
    33181 ctttgaaacc cagttgttta aaaacctgaa cttcatcctt gaagcgggac aacgcctcgc
    33241 catcatcggc ccgaacggcg cgggcaaatc caccctgctg aaactcttgg ccggcgcgta
    33301 caaccccgaa tattcagacg gcctgttacc ggacgaaggc accatcaaat gggcggaaaa
    33361 agccagtgtc ggctactatc cgcaagacca tgaaaacgac ttcgacgtcg atatggacct
    33421 gagcgaatgg atgcgccaat gggggcagga aggcgacgac gaacaagtca tccgcggcac
    33481 tttggggcgt ttgctcttcg gcagtaacga tgtcgtgaaa aaagtgaagg ttctctccgg
    33541 tggtgaaaaa ggccgtatgc tttacggcaa actgttgctg ttgaaaccca atgtcttagt
    33601 catggacgaa ccgaccaacc atatggacat ggaaagcatc gaatccttga acatggcact
    33661 ggaaaaatac aacggcacgc tgatttttgt ctcccacgac cgtcagttcg tttcctcctt
    33721 ggcaacccaa atcatcgaac tggacggcaa aggcggatat gaacactact tgggcgatta
    33781 cgaaagttac ttggagaaaa aaggcgtagc ataaccgccg gttggaacaa tgccgtctga
    33841 agccgcttca gacggcattg ttgataactt taaaatagga agcatatgca gacttatctc
    33901 gtcggcggtg ccgtccgcga ttatcttttg ggcttgcccg tcaaagaccg cgattgggtg
    33961 gtcgtcggcg cagacgcaca aaccatgctg gcgcaaggct tccagcctgt cggcaaagat
    34021 tttcccgtgt ttctccatcc cgaaacgcac gaagaatacg ccctcgcccg caccgagcgc
    34081 aaaaccgcca aaggttacgt cggtttcagt ttccacgccg acaaagacgt tacgctggag
    34141 caggatttga tgcgccgcga cctgaccatc aacgcgatgg cgcaagatgc ggacggcaag
    34201 attatcgacc ctttcggcgg acaacgggat ttggcggcag gcattttgcg ccacgtttcc
    34261 ccggccttcg ccgaagaccc cgtccgcatc ctgcgtactg cccgctttgc cgcgcgttac
    34321 aggtttgaaa tcgccgaaga aaccataaag ctgatgcggc agatggtgga aaacggcgaa
    34381 gcggacgcat tggttgccga acgcgtctgg caggagtttg cgaaaggttt gatggaaaaa
    34441 aatccgcgca aaatgattga agtgttgcgc gaatgcggcg cgctcaaagt cttgctgccc
    34501 gaagtcaatg ccctcttcgg cgtgccgcaa cgcgccgact accatcccga aatcgacagc
    34561 ggcatccata ccctgatgac gctgcaacgc gccgccgata tgggtttgag cctgcccgaa
    34621 cgctatgccg ccctgctgca cgacttgggc aaagccaaaa caccgtccga catcctgccg
    34681 cgccaccacg gacacgacct cgccggtgtc gaacccgtgc gcgaagtcaa tcagcggctg
    34741 cgtgcgccga aacattgcgc cgagcttgcc gaacttgtct gccgttggca cattattttc
    34801 caccaagtcg gacagcttaa aagccaaacc attctgaacg ttttgaaaaa aaccgacgct
    34861 ttcagacgcc ccgaacgctt ctccgctgcc ttaaatgtct gcattgccga tacgcaaggt
    34921 cgtctgaacc gcgaacacac gccctacccg caacgcgcgc actggctcgc cttactcgaa
    34981 gtcgccaatc aagtggattc gggcaaaatc gccgccgaat gccgcgcgca ggggaaagtg
    35041 caccttatcg ccgaacaaat cgaccgggcg cggctggcac aaatcgcccc attgcaaaaa
    35101 gcgtttcgag cggcgcaaga caaaacagaa aaacattaaa acgcccaatg cagccac
//
LOCUS       DAWEYF010000004        32177 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.004, whole genome shotgun sequence.
ACCESSION   DAWEYF010000004 DAWEYF010000000
VERSION     DAWEYF010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32177
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.004"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(379..654)
                     /locus_tag="WGN93_000135"
     CDS             complement(379..654)
                     /locus_tag="WGN93_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ0226110.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(651..1934)
                     /locus_tag="WGN93_000136"
     CDS             complement(651..1934)
                     /locus_tag="WGN93_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0226111.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWPEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWIFGAVQAVTVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2090..3508)
                     /gene="glnA"
                     /locus_tag="WGN93_000137"
     CDS             complement(2090..3508)
                     /gene="glnA"
                     /locus_tag="WGN93_000137"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ0226112.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            3592..3741
                     /locus_tag="WGN93_000138"
     CDS             3592..3741
                     /locus_tag="WGN93_000138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226113.1"
                     /translation="MPSETRPASNFKLENIVSDGKIVNNMLLFVCSKAEYPPFCPNAD
                     KTDAV"
     gene            complement(3782..4168)
                     /locus_tag="WGN93_000139"
     CDS             complement(3782..4168)
                     /locus_tag="WGN93_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226114.1"
                     /translation="MKKMLCLAVFALGLATPAVAADWVQVGIDSDNNTTFGDADSRTD
                     NRAWFETRFAKPQKYGNGKFFNTAKTLEEMDCSGKRFRILTATWYSKSGNSIASYTPS
                     YAEWNYVIPGTLGEAQYKFVCNGYPR"
     gene            4340..5149
                     /gene="aroE"
                     /locus_tag="WGN93_000140"
     CDS             4340..5149
                     /gene="aroE"
                     /locus_tag="WGN93_000140"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ0226115.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            5151..5852
                     /gene="mtgA"
                     /locus_tag="WGN93_000141"
     CDS             5151..5852
                     /gene="mtgA"
                     /locus_tag="WGN93_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ0226116.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDAHFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(6055..6130)
                     /locus_tag="WGN93_000142"
     tRNA            complement(6055..6130)
                     /locus_tag="WGN93_000142"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6095..6097),aa:Phe,seq:gaa)
     gene            complement(6321..7055)
                     /gene="lptB"
                     /locus_tag="WGN93_000143"
     CDS             complement(6321..7055)
                     /gene="lptB"
                     /locus_tag="WGN93_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226117.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(7129..7659)
                     /gene="lptA"
                     /locus_tag="WGN93_000144"
     CDS             complement(7129..7659)
                     /gene="lptA"
                     /locus_tag="WGN93_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ0226118.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7640..8221)
                     /gene="lptC"
                     /locus_tag="WGN93_000145"
     CDS             complement(7640..8221)
                     /gene="lptC"
                     /locus_tag="WGN93_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ0226119.1"
                     /translation="MKVRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPNEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDLPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(8218..8754)
                     /locus_tag="WGN93_000146"
     CDS             complement(8218..8754)
                     /locus_tag="WGN93_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ0226120.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLSVAVLDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMRAKGTLGAALNEYIK"
     gene            complement(8819..9793)
                     /locus_tag="WGN93_000147"
     CDS             complement(8819..9793)
                     /locus_tag="WGN93_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ0226121.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            9889..10944
                     /gene="tal"
                     /locus_tag="WGN93_000148"
     CDS             9889..10944
                     /gene="tal"
                     /locus_tag="WGN93_000148"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ0226122.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRASCGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWAQYFGSPEFAALEAQVANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            11098..11388
                     /locus_tag="WGN93_000149"
     CDS             11098..11388
                     /locus_tag="WGN93_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226123.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            11405..12292
                     /gene="gluQRS"
                     /locus_tag="WGN93_000150"
     CDS             11405..12292
                     /gene="gluQRS"
                     /locus_tag="WGN93_000150"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ0226124.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMGKVPKHAITTP"
     gene            complement(12362..13372)
                     /gene="dusA"
                     /locus_tag="WGN93_000151"
     CDS             complement(12362..13372)
                     /gene="dusA"
                     /locus_tag="WGN93_000151"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ0226125.1"
                     /translation="MNDNTHTLPPRHLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(13403..13894)
                     /locus_tag="WGN93_000152"
     CDS             complement(13403..13894)
                     /locus_tag="WGN93_000152"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ0226126.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(13967..14725)
                     /locus_tag="WGN93_000153"
     CDS             complement(13967..14725)
                     /locus_tag="WGN93_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ0226127.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSEDELHKFYEQQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(14796..15662)
                     /locus_tag="WGN93_000154"
     CDS             complement(14796..15662)
                     /locus_tag="WGN93_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ0226128.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(15711..15989)
                     /locus_tag="WGN93_000155"
     CDS             complement(15711..15989)
                     /locus_tag="WGN93_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ0226129.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGDMIHALGIRAATPDEYFHTAD"
     gene            complement(15989..16279)
                     /locus_tag="WGN93_000156"
     CDS             complement(15989..16279)
                     /locus_tag="WGN93_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ0226130.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(16282..16812)
                     /locus_tag="WGN93_000157"
     CDS             complement(16282..16812)
                     /locus_tag="WGN93_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ0226131.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            17120..19645
                     /locus_tag="WGN93_000158"
     CDS             17120..19645
                     /locus_tag="WGN93_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ0226132.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENVTETV
                     AETPDFNATADDLSALLQPSEVPAVEENAAEIVADDLSALLQPAEAPAVEENVTKTVA
                     EIPDFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLE
                     TPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKY
                     DLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(19818..20294)
                     /gene="gloA"
                     /locus_tag="WGN93_000159"
     CDS             complement(19818..20294)
                     /gene="gloA"
                     /locus_tag="WGN93_000159"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ0226133.1"
                     /translation="MADVYAKQNRSLTTTERNTKMRLLHTMLRVGNLEKSLDFYQNVL
                     GMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDA
                     YEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(20258..21427)
                     /gene="lapB"
                     /locus_tag="WGN93_000160"
     CDS             complement(20258..21427)
                     /gene="lapB"
                     /locus_tag="WGN93_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ0226134.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(21438..21752)
                     /locus_tag="WGN93_000161"
     CDS             complement(21438..21752)
                     /locus_tag="WGN93_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ0226135.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            22062..23060
                     /gene="ilvE"
                     /locus_tag="WGN93_000162"
     CDS             22062..23060
                     /gene="ilvE"
                     /locus_tag="WGN93_000162"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ0226136.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLVPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(23245..24030)
                     /gene="fabI"
                     /locus_tag="WGN93_000163"
     CDS             complement(23245..24030)
                     /gene="fabI"
                     /locus_tag="WGN93_000163"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ0226137.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELGSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(24185..25006)
                     /gene="dapD"
                     /locus_tag="WGN93_000164"
     CDS             complement(24185..25006)
                     /gene="dapD"
                     /locus_tag="WGN93_000164"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ0226138.1"
                     /translation="MSLQNIIETAFENRADITPSTVAPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(25016..25246)
                     /locus_tag="WGN93_000165"
     CDS             complement(25016..25246)
                     /locus_tag="WGN93_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226139.1"
                     /translation="MPSERRRRGIKVLPPFCIDSGAEKAIPAARPIPKRQCSATARVL
                     LTNMRLRGTIAHSFQMNILLENTGKRPTKHLT"
     gene            complement(25216..26859)
                     /gene="pgi"
                     /locus_tag="WGN93_000166"
     CDS             complement(25216..26859)
                     /gene="pgi"
                     /locus_tag="WGN93_000166"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ0226140.1"
                     /translation="MNAFTRAWHALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCNLADAADLEGKMRALRTGAKVNNSEGRAALHTALRLPDGA
                     GAVYADGRDVLPEIRRELNRALKFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEEGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGTIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            27369..28601
                     /gene="pilG"
                     /locus_tag="WGN93_000167"
     CDS             27369..28601
                     /gene="pilG"
                     /locus_tag="WGN93_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ0226141.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            28675..29535
                     /locus_tag="WGN93_000168"
     CDS             28675..29535
                     /locus_tag="WGN93_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ0226142.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLIAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLL
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGETGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            29537..30169
                     /locus_tag="WGN93_000169"
     CDS             29537..30169
                     /locus_tag="WGN93_000169"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ0226143.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSQKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHND"
     gene            30162..30371
                     /locus_tag="WGN93_000170"
     CDS             30162..30371
                     /locus_tag="WGN93_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ0226144.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(30456..32132)
                     /gene="pilB"
                     /locus_tag="WGN93_000171"
     CDS             complement(30456..32132)
                     /gene="pilB"
                     /locus_tag="WGN93_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ0226145.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         7535 a         9080 c         8218 g         7344 t
ORIGIN      
        1 attatggtag atactaactc tttaagttga catattgtgt gatatcgagg gctgtaccgt
       61 attttcccat cgtattttcc catcgtattt tcccatcgta ttttcccgtt ctttatatga
      121 gcggcaggca tcctcataaa agaagggata ccgataagga aaaatacccc agcataaaaa
      181 atatactgat taatcaatac aaatccaaca aacagttcat cgtattcttt tctgttggcg
      241 tataaaaata ctgatatatt ccttcacttt catagggcga cgctttatgt accgtcctgt
      301 gtgttgaaac gtcggttttc cttaccgcct gccccgcttt tccctgattg ctgccaactg
      361 ccgtccgaac ttgaaccgtc aggtttcaga cggcattttt tctgcctgct cccacaattg
      421 ccgtttttgt gcggcggtca gttttttgac ggcgatttcc tgcctgagtg ccgttccttt
      481 atccatcccg cctgcaacga tacgcatcgc caccggtttg aatacgcggg tatatttcgc
      541 gcctttaccg gttgtgtggg cggcaagccg ctgttgcgga ttcgggctga tgccgcaata
      601 gaacgcgctg ttttcacaca atatcaggta aacgctccag tttgacgcgt tcatctgcct
      661 gcatcctgag ttttctcccc gttccaaggc gcaactttca gcagcagcag catacccggt
      721 agggcgagtg cgaaacacag ctggaaaaac ggtacatacc cgagccattc gatcagataa
      781 ccggcaaagg aattgatgac cgtacgggga acagcggaca ggctggtaaa cagcgcaagc
      841 tgcgttgcgg taaatgcggg attggtttca cgcgccatat acgatacgaa cgccgccgtc
      901 cccaaaccca cgccgactgc ctctgcgccg ataactgccg ccagcatcag cctctcgcct
      961 gtgccgaccg tgtcgaaatg tccgaaccct gccagccata caaaccccaa aacggttaca
     1021 gcctgcaccg cgccaaatat ccacaaggct ttgtttacgc cgattttcag catccacacg
     1081 ccgcccaaga tacctgccgc cactgccggc cacagtcctg catttttcgc aatcaaaccg
     1141 atgtctgtct tgctgaaacc catatccaga taaaacggcg ttgccaacgc ggttgccata
     1201 ctgtcgccga gtttgtaaag gaagataaac agcagcacgc acaccgccga agcgatgccc
     1261 ttgcgcgtaa aaaattcttt aaacggctct accacggtct gcttcaacgt tttaggaacg
     1321 gcaggcggca acacgggttc gcgcgcaaga aacagcgtca tcagaaggcc gggcagcata
     1381 aacagcgaag tgatgacaaa cacctccggc cacggcatcc tgtctgccaa caccaaactc
     1441 aatgaaccgg gaatcagggc ggcaatccgg taggcgttca catgaaccga gttgcccaaa
     1501 cccaattctt cgtctgacaa aatctcgcgc ctgaacgcat ccaatacaat atcctgactg
     1561 gcggaaaaaa aagcgacaag caccgacaag ccggcaatca gcggcagatg attacggggg
     1621 tttaaaaagg cataggccgc caaagccgcc agcaaccctg cctgcgtcag cagcatccac
     1681 ccgcgccgcc gtcccaaaac gggcagcctg accgcgtcca tcagcggcga ccacaaaaat
     1741 ttccaagtaa acggcagacc gattaacgcc atcagcccga tgctcttcaa atccacctgc
     1801 tcgctgcgca accacgccgg aatcaggtta atcagaaagt acagcggcag ccccgaggta
     1861 aaccccgtaa aaatacagac aagcatattt cgggaaaaga tttgcccgat aaaacctgat
     1921 ttcgatgcag tcatcgttcg tgcagcccaa aaaaaacaaa agcctattgt agcaaatatc
     1981 gcccgcctgc tgaaaaatgc cgccccgcgc cgccggtttg ccgttcaaat gcaaaatgcc
     2041 gtctgaaact gtgttcagac ggcattgctt ttctgaaaac cagacgtgct tacaggctgt
     2101 aatacatttc aaattccagc gggtgcggcg ccatgcggat gcggcgtacg tcttcttctt
     2161 tgaaagcgat gtagctgtcg atccagtctt tgctgaacac gccgccgcgc aggaggaatt
     2221 cgtggtcggc tttgagggcg gccagtgctt cttccaaaga agcgcaaacg gtcggcacca
     2281 atgcatcttc ttccggcggc agatcgtaca ggtttttatc ggcagggtcg cccggatgga
     2341 ttttgttttg aatgccgtcc aaacccgcca tcaacagggc ggcaaatgcc aaatacgggt
     2401 tggcggtcgg atcggggaaa cgcgcttcga tgcggcgcgc cttgctgctg ttcacggacg
     2461 gaatgcggat ggaagcggaa cggtttttgg cggagtatgc cagtttggtc ggcgcttcaa
     2521 agtgcggcac gaggcgtttg taggagttgg tggacggatt ggtaatcgcg ttcaaggctt
     2581 tggcgtgttt gatgatgccg ccgatgtagt agagcgcggt gtcgctcaag ccggcatagc
     2641 cgtcgcctgc gaacaggttt tgaccgtctt tccaaatgga ttggtgaacg tgcataccgc
     2701 tgccgttgtc gcccataatc ggtttgggca taaaggtggc tgttttgccg aagttgtggg
     2761 caacgttttg aatcacatat ttcatgtctt gggtttggtc ggcgcgtttg accaaggtgg
     2821 cgaaacgcgt gccgatttcc atttggctgc cggtaccgac ttcactgtgg tggacttcga
     2881 cttcgatgcc gagttcttcc aaaatgttta ccatcgcgga gcgcaggtct tgtcccgcgt
     2941 caatcggagc aacgggcgcg taaccgcctt tgacggcagg gcggtggccg gtgttttgac
     3001 cgtccatatg cagaccgctt gcccacgcgc cgctttcgga cgtgatttcg taacgggttt
     3061 tgtgcatatc ggtttcaaat tctatgccgt cgaatacgaa aaactcgggt tcgggaccga
     3121 aataggcggt gtcgccgatg ccggaagatt tcaaataggc ttcggctcgg cgggcgatgg
     3181 agcgcgggtc gcggtcgtaa ccctgaccgt cggcgggatc gataacgtcg caagtcaaca
     3241 caacagtcgc atcatcataa aaaggatcga cgaaggctgt agacgcatcg gggcgcaact
     3301 gcatatcgga agcctgaatg cctttccagc cgccgataga cgaaccgtca aacgcctgac
     3361 cgttttcaaa ccactcttcg gggtcttcca acacgatgcg cgcaggcacg gtaaagtggt
     3421 gctgcttgcc tttggtatcg gtaaagcgca aatcgacaaa gcgggcttcg ctttcttcaa
     3481 tcaattttac ggcgttttta atagacattt ttcagctcct ggaaaaggga aatagcaaaa
     3541 tatgcggaac gcggcggctt gacgcaaagt cggcatgatt ctaccacgtc catgccgtct
     3601 gaaactcgcc ctgcgtcaaa tttcaagctg gaaaatatag tttcagacgg caagattgtc
     3661 aacaatatgc ttctgtttgt ctgttcaaaa gcggaatacc cgcccttttg tccgaatgcc
     3721 gacaaaacag atgccgtctg aaagcagttc agacggcatc tgttgtttgg tttgaaaacg
     3781 gtcagcgagg atagccgttg cagacaaatt tgtactgagc ctctccaagc gtaccgggaa
     3841 taacataatt ccattcggca taggatggtg tataagaagc gatagagttt cccgatttgg
     3901 aataccacgt tgccgtcaat atcctaaaac gtttaccact gcaatccatt tcttccaacg
     3961 ttttagctgt attaaaaaat tttccattgc catacttttg cggcttggcg aaccttgttt
     4021 caaaccatgc tctgttgtcc gtacggctgt ctgcatcacc aaacgtggta ttattgtcac
     4081 tgtcaatacc tacctgcacc caatccgccg ccaccgccgg tgttgccaac cccaatgcaa
     4141 atactgccaa gcacaacatc tttttcatgt ccgaccctct cgtccttgtc aacaaaataa
     4201 agttaaattg taaaaaaaaa acgacttttt tcaagagaaa aatattccgt catgctatct
     4261 gacaaccgtt tcagacggca tcgtttccat ctgtacgccg ccgttataaa atagccttcc
     4321 cgtcttttgg aacacgacca tgaccgccct cccccgttac tccgtttttg gcaaccccgt
     4381 tgcacacagt aaatcgccgc aaatccatca gcaatttgcc cttcaggaag gcgttgacat
     4441 tgaatacgaa cgcatttgcg ccgacatcgg cggttttgca caggcggttt cgacattttt
     4501 tgaaacaggc ggttgcgggg caaacgttac cgtaccgttc aaacaggaag cgtttcatct
     4561 ggcggacgag cattccgaac gcgcattggc ggcaggtgcg gtcaatacgc tgattccgtt
     4621 gaaaaacggc aagctgcgtg gcgacaacac cgacggtatc ggtttgacca acgacatcac
     4681 gcaggtcaaa aatattgcca tcgagggcaa aaccattttg cttttgggcg caggcggcgc
     4741 ggtgcgcggc gtgattccgg ttttgaaaga acaccgccct gcccgtatcg tcattgccaa
     4801 ccgtacccgc gccaaagccg aggaattggc gcagcttttc ggcattgaag ccgtcccgat
     4861 ggcggatgtg aacggcggtt ttgatatcat catcaacggc acgtccggcg gtctaaacgg
     4921 tcagattccc gatattccgc ccgatatttt tcaaaactgc gcgcttgcct acgatatggt
     4981 gtacggctgc gcggcaaaac cgtttttaga ttttgcacga caatcgggtg cgaaaaaaac
     5041 tgccgacgga ctgggtatgc tagtcggtca agcggcggct tcctacgccc tctggcgcgg
     5101 atttacgccc gatatccgcc ccgttatcga atacatgaaa gccatgtaat atgttccgca
     5161 tcgtcaaatg gctgattgcc ctgcccgtcg gcatctttat ctttttcaat gcctatgtgt
     5221 acggcaacat cattacctac cgcgccgtcg cgccccatcg gactgccttt atgtcgatgc
     5281 ggatgaagca gtttgaacag gaaggtcgcg atgtcgcact ggattaccgc tgggtgccct
     5341 acaaccgcat ctcggtcaac ctgaaaaaag ccctgattgc ttccgaagat gcccattttg
     5401 ccgggcacgg cggcttcgat tggggcggca ttcaaaacgc catcaggcgc aaccggaaca
     5461 gcggcaaagt gaaggcgggc ggctcgacca tcagccagca gcttgccaaa aacctgtttt
     5521 taaacgaaag ccgcagctat atccgcaaag gcgaagaagc ggcgattacc gcgatgatgg
     5581 aagccgttac cgacaaagac aggatttttg aactgtattt aaactcaatc gaatggcact
     5641 acggcgtttt cggcgcggaa gccgcgtccc ggtattttta tcaaataccc gccgccaagc
     5701 tgaccaaaca gcaggcggcg aaactgactg cccgcgtccc cgccccgctc tactacgccg
     5761 accatccgaa aagcaaacgg ctccgcaaca aaaccaatat cgtgctcaga cgcatgggtt
     5821 cggcagagtt gcctgaaagc gacacggact gagtgccgcc gcaatataaa atgccgtctg
     5881 aaatatcatt cagacggcat atgctttctg cctttaccct tttctctaaa acgcaacggg
     5941 gcggtcatta tcgcttttgt ccttctacat aacggtcaga cacaaaacgt gtccgacacg
     6001 gacaacttcc caaaaacggc aggcaaaaaa aataaccgct tataagcggt tttttggtgg
     6061 ccagaggcgg aatcgaaccg ccgacacacg gattttcaat ccgttgctct accaactgag
     6121 ctatctggcc tttgtctgtc tcgttaagag atgcgtatta aaccaaatta cgggacgaca
     6181 tgcaagcata tcgggcaata ttctttgaaa acaggtttaa gtcaatgttt taaatttgaa
     6241 ttaatttatg taaaaacaac ataaatccgt atttttgccg cctgcccgac gatattaggt
     6301 cgcccgtctg aaaaatattt tcaatatttg aagttcttac ccagataaac agaacgaacc
     6361 tgttcgtttc cgaccaaatc atcaggtttt cccgatgcca acaccgtgcc gtctgaaata
     6421 atgtaggccc gatcgcagat gctgagggtt tcgcgtacgt tgtggtcggt aattaatacg
     6481 ccgataccgc gcgacttgag aaatccgatg attttttgga tgtcgatgac ggcgatggga
     6541 tcgacgccgg caaaaggctc gtccaacaaa ataaaatgcg gtttcatggc aagtacgcgg
     6601 gcgatttcga cgcgtcggcg ttcgccgccc gacaaagatg gggcaggatt attgcgcaaa
     6661 cgctcgatat tcaggtcggc aagcagtttt tcaacttcgc cgtcgatgcg gcttttgtct
     6721 ttggtactga tttctaaaat ggcgcggatg ttttgttcga cggtcatttt acggaaaata
     6781 gaggcttcct gcggtaggta gccgacaccc aggcgggcgc gttcgtgtat gggcaggtga
     6841 cgcaattcct gcccgtccag catcacgctg cccgcatcgg cggcaatgag tccaacaatc
     6901 atgtagaagc tggtggtttt acccgcaccg ttgggcccga gcaggccgac gacttccccg
     6961 ctttcgattt caagggagaa gcttttaacg acttggcgtt ttttgaaact tttttgcagg
     7021 ttttgaacaa caaggcggct gacgtttgcg ctcataaata tctcttcaat atcttcggtc
     7081 ggcaaatgcc gtccgaacca ggtttatgtt tcagacggca ttttgggatt attcggattt
     7141 ttgcgtactc gaaggctgga taacgacgct gaccctgccg gatttggaag cggattttgc
     7201 gccggatttt gtgctgccgc tgatggtata gacttcggtt ttggtgttgt atgtaatcac
     7261 cgcaccttcg gcgacatcgc cgccgcgctg tactttggca ttaccggtta agactacggt
     7321 gctgcctgca gatgaataag caacgttgtt tgcctgtccg cgcaccgtgc ctttgccgcc
     7381 gtccaatgtc tggctgaagc ggactggcga accttccgcc ctcacggatt cgccgccttt
     7441 gccgccgcgt gtaacattga cgcgggcggc ggaaatattg agcgtaccct gtctgatgac
     7501 gacgtttccg ctgaatgtgg tgctttggtt ggcttgatcg agcgaacctt ggtcggcctc
     7561 aatctgaata ggctgcctgc tgtcgctttg aagggcaaaa gcgggggacg ccgaaaaaaa
     7621 tgctattaaa acaaatagct tacatatctt ttgtatcata aatcgtggct ttcactttag
     7681 atgagaagtt caacatgcct gttttgtggt cgtaagtcat gccgcccgcc tgaccgtgcg
     7741 atgcaccata ttggaaactg acaggcgtat cggtttgggc atattgagat tcggtatcga
     7801 cgtgcagctt ttcggcttca actttacccg cctgccgttt gccgtcggcg gttttggtca
     7861 gcacaacgtt gtttttaaaa agaacctgtt tgttttcggt atggtaaacg gcttcatcgc
     7921 tgccgacttc gtacaacaac ctgccttctt ggaagaacac gagatgcggt aaatcgaaat
     7981 gaatgtcgct gctttcggga aactgtttcg cgcctttcgc gctcaaatgt tctttcaagt
     8041 atccctgttc gtcaaaccgc ctgccgtcca agccgtccat tgtgtattgg ggttcgttgg
     8101 gattgagcct gacttcctcg atttcgactt cgctgatacg acccaaccat gccgacagac
     8161 cgcccaaggc aaccgccaat atcaatggga acgcaattcc gtaccgccat cttactttca
     8221 tttgatgtac tcgttcaaag ccgcgcccag cgtacctttc gcgcgcataa tcaggtcgca
     8281 cacttcgcgc accgcgcccg caccgccggg gcgtttggca atataggcag cgtgttgcag
     8341 cgtaaaccaa tgcgcgtcga ggacggcaac cgacaatccg caacgcacca tcaccggcaa
     8401 atcgaccacg tcgtcgccga caaaggcaca ctcggcttct tccacgccga cctgagcgcg
     8461 cagctcttca tacgcggcgc gtttgtccga aatgcctttg aagtagtaat ttatgcccaa
     8521 ctgtttgacg cggatgccga cggagggcgc gtcccgacct gtgataatcg cagtctgcac
     8581 gccgcttgcc tgaagcattt tcagaccgtg tccgtccagt gtgtgaaacg atttgatttc
     8641 ttcgccgtta tcgcggataa agatgcgccc gtcggtcaaa acgccgtcca catccaggat
     8701 caacagtttg attttggcgg cgcgcgcctg taattcggga gaaattgcct gcatgggatt
     8761 tccttgtttt cagacggcat atcttaccac aaatgccgtc tgaaacggct gcaacgcctt
     8821 atacaatccg tgccgccagc aggtcgtgca tattcagcgc gccgatcagc acgccatctg
     8881 catcggtaac cagaagcccg ttcacatggt ttgcctgcat gactttcagg gcttcggtgg
     8941 cgagacgttc ggcggagatg gttttaggat gcgtatgcat gacttcgtct atcgaaagac
     9001 cggtaaaatt gtcgcattct tgaaacaggc ggcgcaaatc gccgtcggtg aatacgcctt
     9061 tcagacggcc ttgcccgtcc gttaccgcca acatgcccag ccctttttca ctcatgctga
     9121 cgatggcttc tttcaagggc gtgccgagtc ggacggcagg caggccgccg cctttgtgca
     9181 taatgtcggc aacgcgcaaa agtaggcgtt tgccgaggct gccggcagga tggctcaagg
     9241 cgaaatcgtc gggcgtgaac gcgcgtgcgc gcagcaggac gaccgccaac gcatcgccca
     9301 aagccatgac ggcggtggtg ctggtggtcg gggcaagccc cagcgggcag gcttctttgg
     9361 aaaccgacgc cgtgatgtgg atgtcggcat ggcgcgccat ggttgaatcg gggcgggcgg
     9421 tgatgcagac aagcgtgatg tctttgcgtt tgagcgcggg gatgatggcg gcgatttcgt
     9481 cgctttcgcc ggaattggaa atcgcgacga ccacgtcgtt gtccacaatc atgcccaaat
     9541 cgccgtgtgc cgcttccgca gggtggacga aaaacgcggg cgtgccggtc gaggccatgg
     9601 ttgccgccat tttgcgcccg atatgtcccg acttgcccat gcccgtgata acaaccctgc
     9661 ccttgcagtg caacaacgcg tctgccgcaa ggacgaagtt ttcgtccaat tccgctgcaa
     9721 tttcgcgcaa gccttccgct tcggtgtgca acacttcgcg cgcccagtcg agatattttc
     9781 cgttttctgc cattgccatc cgcctttgct gtaacaaaac tacccaaaat ttccgaatcg
     9841 gggtagcata agcattcaaa ccccgccatc catccaaagg aatcagaaat gactatttta
     9901 tcggacgtta aagcattagg acaacaaatc tggctggaca acctttcccg ctcgctcgtg
     9961 caaagcggcg aattggcgca aatgctgaaa caaggcgtgt gcggcgtaac ttccaatccc
    10021 gccatcttcc aaaaagcctt cgccggcgac gcgctttacg ccgatgaaat cgccgccctc
    10081 aagcagcaaa acctcagccc caaacaacgc tacgaaacca tggcggttgc cgatgtgcgt
    10141 gcctcctgcg gcgtttgcct tgccgaacac gaatccaccg gcggcaaaac cggtttcgtc
    10201 agcctcgaag tttcgcccga attgtccaaa gacgcgcaag gcacggtaga agaagcgcgc
    10261 cgcctctacg ccgccatcgg gtgcaaaaac gcgatgatta aagtgcctgc caccgacgca
    10321 ggcatcgatg cgctcgaaac cctcgtttcg gacggcatca gcgtgaacct cacgctgctg
    10381 ttctcacgcg cccaaaccct caaagcctac gccgcctacg cgcgcggcat tgccaaacgc
    10441 ttggcagctg gacaaagcgt tgcccatatc cacgtcgtcg ccagcttctt catctcccgc
    10501 gtggacggcg cgctggacac aacactgccc gaccacctca aaggcaaaat cgccatcgcc
    10561 cttgccaaag ccgcctacca agactgggct caatacttcg gcagcccgga atttgccgcg
    10621 ctggaagccc aagtcgcaaa ccgcgtgcag cttttatggg catccaccgg cgtgaaaaac
    10681 ccggcctatc ccgacacact ctacgttgac agcctgatcg gcgcgcacac cgtcaacacc
    10741 gttccagatg ccacgctcaa agcctttatc gaccacggca cagccaaagc cacgctgacc
    10801 gaaggcgtag aagaagcaca agcgcagctt gccgaaaccg ccgcgctcgg catcgatgtc
    10861 gaaaccttgg cggcacgttt gcaggaagac ggtttgaaac agtttgaaga agcgtttgaa
    10921 aaactgctcg caccgttggt ttaaactttt catccccgat gccgtctgaa aggctttcag
    10981 acggcatcgc ccgtttgacc ggacacagtg cggcatatca aggattcacc ctaaaaatat
    11041 taatgggcaa gaagttaatg cacgacatta cccaccaaca caaaaggaaa tagaatcatg
    11101 gcaaaagcac tcgaaatcat ttcacccaat gaaatttatt cagatctgat ttttaaggat
    11161 ccggtacctc cccatacaat atatacagaa ttgatgaaac tggttagtag aaatgcaagt
    11221 aatgagagaa tcgcagatag agccttcgat tttttctcgt ccggccttat ggatggttca
    11281 gctaccgaag agcaatataa tgccctatat gatttaacct tacttgaaga acccgggatg
    11341 gaactgaata aagatgagat aatggctttg attaatagtc ttaaataaag gggccgtacc
    11401 ggatatgtac acaggacgtt tcgcccccag cccgaccggg ctgctccaca tcggctcgct
    11461 gctgaccgcc gccgcttcct atgccgatgc acgctcaaac ggcggcaaat ggctggtccg
    11521 catggaagac ctcgatccgc cgcgcgaaat gccgggggcg gcaagccata tcctgcacac
    11581 gcttgaggca ttcggattcg agtgggacgg agaagtcgcc tatcagagcc gccgttacgc
    11641 cctgtatgaa gaaacactat gccgcctgaa aaccgccgga ctggtctatc cctgccattg
    11701 cagccgcaaa gactggcaga ccggggcaag gcggggcgca gacgggttcg tctataacgg
    11761 acgctgccgc aatccgcagc aacgccctgc accgcaaggc aaacagcctg cgtggcgcat
    11821 ccgcgtcccc gaccgcgaca tcggcttttc agacggcatc gtcggcggtt acgcccaaaa
    11881 cctcgcccgc gacatcggcg atttcgtcct gcttcgtgca gacggttact gggcatacca
    11941 gctcgccgtc gttgccgacg atgccgaaca gggcgttacc cacatcgtcc gcggacaaga
    12001 cctgctcgtt tccacgccgc gccaaatcta tttgcagcag tgtttgggcg ttccgacacc
    12061 gcaatatgcc cacctgccgc tgctgaccaa cgcacaaggg cagaagtggt cgaaacagac
    12121 gctcgccccc gcattggatt taaaccgccg cgaacaactc ctccgccaag tgttccgtta
    12181 cctcaagctg cccgaagcac cggaaaccga ccgccctgcc gaactgctcg actgggcggt
    12241 ggcacactgg gatatgggca aagtgccgaa acacgccatt accaccccct aaacaccgcc
    12301 cgacaaacgc acaaatgccg tctgaagcct tcagacggca tttcacacat acagccccgc
    12361 cctattcgcg cgtatttgcc cgctcaacct ctttccacgc ttcgagaatc aggctgccgt
    12421 cgttgtcttt caagagcgtt gcgtcggaaa gcatacgccg ccaagtccgc gcacctttca
    12481 aaccgtgcat cagcccgagg ctgtggcgga cgatgtggcg caagattgtg ccgcgtccgg
    12541 cttggatctg ggcttggctg tatgtgtaga ggcactgcac caaatcggcg tattcgatcg
    12601 ggctgcgagt atcgccgtaa aacaatctgt cccattcgcg catcaccatc gggttgtggt
    12661 acgcctcgcg cccgaccatc acgccgtcaa cgtgttgcag gtgtccggcg attgcttcgt
    12721 tggtggtgat gccgccgttg atgatgattt ccagcccggg aaactcctgc ttgaggcggt
    12781 aaacgtaatc gtatttcaac gggggaacgt cgcggttttc tttgggggaa agaccgtcca
    12841 gccaagcgtt gcgggcgtgg acgatgaagg ttttgcaggc ggttttgtcg cgcagcgtgc
    12901 cgacgaaatc ggcaacggtt tggtattcgg tctgcctgtc cacaccgata cggtgtttga
    12961 cggtaacggg aataccgacc gcgtcctgca tggcgttgag gcagtcggca accagcccga
    13021 cttcgttcat cagacacgcg ccgaacgagc ctttctgcac gcgcggactg gggcagccgc
    13081 agttgaggtt gacctcgttg taaccgtatg cctcggcggc tttggcggct ttcgccaaat
    13141 cggacggatc gctgccgccc agttgcaggg cgacgggctg ctcgccttcg ttgaacatca
    13201 aaaagcggtc tttgtcgccg taaacaatcg cgccggcgtt gaccatttcg ctgtacagcc
    13261 aagtattgcg ggtaatctgg cgcgccatat aacggtagtg cctgtccgtc cagtccaaca
    13321 tcggggcgac ggacaggtgg cgcgggggaa gggtgtgtgt attgtcgttc attgtcgata
    13381 ttttatcatt gcggattcaa tttcaatccg gaacaacctt catttttggg gaaatccgcg
    13441 tcatgaaaga gtccagcagt atggttaccg gcccgtcgtt gcagagcgac acctgcatat
    13501 gcgtgcggaa acgccctgtt tcgacatgaa ttccgtgtcc gcgcaacagt tccgccgttc
    13561 gcaggtaaag ctgctgcgcc tgttctgcag gtgcggcttg cgaaaacgaa ggccgccgcc
    13621 cgcttgtcgc gtcggcataa agcgtaaact gcgacaccag cagcaccgcg ccgccgacat
    13681 ctttcaaaga caggttcagc ttgcccgctt cgtcttcaaa cacgcgcaaa tgggcgattt
    13741 tgtcggcgat atagcgtgca tctttttctg tgtcgctatg cgttacgccg agtaacacga
    13801 caaacccgcc gtcgattttg ccacaggttt ccgtgccggc ttcggacacg acatccacct
    13861 ttgcacctac cgttttctgt atgaccgcac gcataagccg tcctccttac ctgaacgtgc
    13921 aatgccgtct gaaaggcttc agacggcatc ggtattggaa atgccattac ggtttgacac
    13981 cgttttcttc caaaagggca tcgattttca agcgggcttt ttcctgtctc aaaccctgct
    14041 ccaactggtt tctgaccaac tcgaaaggct gcgcgtcggg gtttttcccg acctcgctga
    14101 gtttgaacag ataatagcgt tcgcccaatt tgaccggatc gcgggtaacg tcgccccgat
    14161 tcatcgcggc aaactgcgaa gccagcggct cgggaagctg ctgcgccata atgaaaccgt
    14221 caaaagcctg ctcgtcgttc ggataacgct tcatcagccc ttcaaaagac agccctttga
    14281 gcaggagctg ctgcgcctga cgcgcctcct cttcggttgc gaagctgacc tgctgcaatt
    14341 tgatcatgcg gatttgctgt tcgtaaaact tgtgcagctc gtcttcggaa accgtttccg
    14401 aacgttccag aaaacggacg tactcctcgg cataaaaaga cgcttcggcg attttaaagc
    14461 ggttttggac atccttatcc ttatccaaac cttccttcaa tgccctgttt ttcaaaactt
    14521 ccaaagtttg tagccggcgg acggcatcgt ttcggattgc ctgcccgtcc ggtttttggg
    14581 actgctccgc atgccggtct gcctgctgca tgatctgcgc caccagcgta tccaccaaag
    14641 ccgggtcgat ttcgggtgct ttggctgccg caaaacctgc caacattgca gcaataactg
    14701 cggcagcggt ttttttctgt ttcatggtat tccctgtcct gcgcggcggc aaaacgcctg
    14761 tctgaacgtc ttgccgccat atcccgtttt cagaattatt ttgcaggttt gatgtttgcc
    14821 ttgcccaaca gtgcaccgac ggcacggtca atccgttccg cctgaaggtt gcccgcaatc
    14881 tgtcctttca tttcatcaaa agaaggcact tttacctcgc ggctgtcgtt gacataataa
    14941 acgccgtaga aatcgccgtt tttcagcggc gttgccgtaa attcgccttt tttcaagtcc
    15001 ttaattgcct gataaagcgg cggaacaccc tgttccaaat ctttcagcgg cacatatccg
    15061 accggcgcac cggtctgttt ggtacggtcg ttgagggaat attgtttcaa gacggcatcg
    15121 aaaccttttt tcgccttcaa gtcggcaacc gctttttttg cattttcttc cttgtcggtc
    15181 aggatttcgc ccaactggac ttcctgcgta cctttgtaaa aaccgctgat attgtcatat
    15241 gcggctttta cttcctgctc ggaaaccggt tgggttttgg cgatatgcaa tgcgtatgcc
    15301 tcgccgttca agccatattt taccgcctgc caaacggttt tgaaggacgg tttcttgtcg
    15361 tcgcccgact ttttcgcttc ggcacgcaat ttggcaagcg catttttaaa ctctgccgac
    15421 cggtcgagtt tcaggcgttt cacttcctgt gcgaccacgg tgttgaccac ttcgttttcc
    15481 agcagggatt ggcgcagttg cggcgtgtct tcggcacggc tgttttccgc acggaatgcg
    15541 gcaacctgcg catcgatgac ggaactgtcg attttctgac cgttgacggt tgccagcgtt
    15601 tgggcaaaca ggctgccgga acaggcaagc agtgcaacgg aagtcaggat ttttgctttc
    15661 ataatcttct ctctttaaat tttaaattga aatgttcggg cagacttcat tcagtccgcc
    15721 gtatggaaat actcgtcagg ggtagccgcc cggatgccga gcgcgtgaat catgtcgcct
    15781 gaaaacaaat ctttgagcag cgatttgacc gttttctggc ggttcaggcg gcttacgcct
    15841 tcaaaacggc cgctgacgac caaaacggca taatgtccgc cgccggtatt gcccgcgtgt
    15901 cctttgtgca gatggctctc atcgccgatt tccaacacca gcggatcgag cgtctgcagg
    15961 cgttcgcgga tcaaatcgac ggccggcatt atttgaacac cgctttaaac ggcttgatca
    16021 gcacttcgct gtacacgcct gcatgaacat agggatcgtc ttccgcccac gcctctgccg
    16081 catccaaaga ctcgaactgc gccacaatca aactgcccga aacgcggttg gagtcctccg
    16141 gcaaaggatt cgggcctgcc gtcaacagcc ggccttccga cttcagcgtc tccagccgtt
    16201 tgaggtgttc gggacgtgcc gccatacgcg cttcatacac attctccccg tctgttgcca
    16261 gcaacataaa atattccaca gtcaatcctc ctttttcaga caggtactca gataaatacc
    16321 ctgaataata aagaaaacaa gcatcagtgc agtcgagccg aacattttat agttgaccca
    16381 ttgcgactcg aaccgggtaa acacaaacca gttggcgata cccataaaaa tcaggaaacc
    16441 gacccacata tacgtcaatt tcgcccatac ggcatccgga agctgaatct ccctgccgat
    16501 actcgccttc aagccgtttt taccggcgag gtggctgccc cacaggaaca gcgcgcccag
    16561 ccaaaacaaa acgctcggct tccacataat gaagcggctg tcgcccaaaa caatggttgc
    16621 gccaccgaat atcacaatca gcaccagtcc gacccactgc atcgtatcca gctttttata
    16681 tttccaatac agaaaagccg cctgaaccac accggcaacc aaggcgaccg ccgttgcggc
    16741 aatcatgttt ttggtaacgg tataggtggc gaaaaacagg atgacggaca aaaggtcgct
    16801 gacgaatttc atatccaaat gagaaagcaa atcaaataaa cgctaatcat acaggcagaa
    16861 ccctgttttt gcacctgcaa aaccaacaaa ttttgttttg attgatgcaa atatgcacag
    16921 atgtttttga aaaaagatgg agatatgtca taatttgtaa aaacggcgaa tgattgccgt
    16981 ttaaaatgtg gcggcggtcg gtacattcac atattaaatg cccgccggcc gactgccccg
    17041 ccgatgcccg atgatgacga aatttacaga ctgtacgcgg tcaaaccgta ttcagccgcc
    17101 aacccacagg ggatacatct tgaaaaacaa cagacaaatc aaactgattg ccgcctccgt
    17161 cgcagttgcc gcatcctttc aggcacatgc tggactgggc ggactgaata tccagtccaa
    17221 ccttgacgaa cccttttccg gcagcattac cgtaaccggc gaagaagcca aagccctgct
    17281 aggcggcggc agcgttaccg tttccgaaaa aggcctgacc gccaaagtcc acaagttggg
    17341 cgacaaagcc gtcattgccg tttcttccga acaggcagtc cgcgatcccg tcctggtgtt
    17401 ccgcatcggc gcaggcgcac aggtacgcga atacaccgcc atcctcgatc ctgtcggcta
    17461 ctcgcccaaa accaaatctg cactttcaga cggcaagaca caccgcaaaa ccgctccgac
    17521 agcagagtcc caagaaaatc aaaacgccaa agccctccgc aaaaccgata aaaaagacag
    17581 cgcgaacgca gccgtcaaac cggcatacaa cggcaaaacc cataccgtcc gcaaaggcga
    17641 aacggtcaaa cagattgccg ccgccatccg cccgaaacac ctgacgctcg aacaggttgc
    17701 cgatgcgctg ctgaaggcaa acccaaatgt ttccgcacac ggcagactgc gtgcgggcag
    17761 cgtgcttcac attccgaatc tgaacaggat caaagcggaa caacccaaac cgcaaacggc
    17821 gaaacccaaa gccgaaaccg catccatgcc gtccgaaccg tccaaacagg caacggtaga
    17881 gaaaccggtt gaaaaacctg aagcaaaagt tgccgcgccc gaagcaaaag cggaaaaacc
    17941 ggccgttcga cccgaacctg tacccgctgc aaatactgcc gcatcggaaa ccgctgccga
    18001 atccgccccc caagaagccg ccgcttctgc catcgacacg ccgaccgacg aaaccggtaa
    18061 cgccgtttcc gaacctgtcg aacaggtttc tgccgaagaa gaaaccgaaa gcggactgtt
    18121 tgacggtctg ttcggcggtt cgtacacctt gctgcttgcc ggcggaggcg cggcattgat
    18181 cgccctgctg ctgcttttgc gccttgccca atccaaacgc gcgcgccgta ccgaagaatc
    18241 cgtccctgag gaagagcctg accttgacga cgcggcagac gacggcatag aaatcacctt
    18301 tgccgaagtc gaaactccgg caacgcccga acccgctccg aaaaacgatg taaacgacac
    18361 acttgcctta gatggggaat ctgaagaaga gttatcggca aaacaaacgt tcgatgtcga
    18421 aaccgatacg ccttccaacc gcatcgactt ggatttcgac agcctggcag ccgcgcaaaa
    18481 cggcatttta tccggcgcac ttacgcagga tgaagaaacc caaaaacgcg cggatgccga
    18541 ttggaacgcc atcgaatcca cagacagcgt gtacgagccc gagaccttca acccgtacaa
    18601 ccctgtcgaa atcgtcatcg acacgcccga accggaatct gtcgcccaaa ctgccgaaaa
    18661 caaaccggaa accgtcgata ccgatttctc cgacaacctg ccctcaaaca accatatcgg
    18721 cacagaagaa acagcttccg caaaacctgc ctcaccctcc ggactggcag gcttcctgaa
    18781 ggcttcctcg cccgaaacca tcttggaaaa aacagttgcc gaagtccaaa caccggaaga
    18841 gttgcacgat ttcctgaaag tgtacgaaac cgatgccgtc gcggaaactg cgcctgaaac
    18901 gcccgatttc aacgccgccg cagacgattt gtccgcattg cttcaacctg ccgaagcacc
    18961 gtccgttgag gaaaatgtaa cggaaaccgt tgccgaaaca cccgatttca acgccaccgc
    19021 agacgatttg tccgcattac ttcaaccttc tgaagtacct gccgttgagg aaaatgcagc
    19081 ggaaatcgtt gccgatgatt tgtccgcact gttgcaacct gctgaagcac cggccgttga
    19141 ggaaaatgta acgaaaaccg ttgccgaaat acctgatttc aacgccaccg cagacgattt
    19201 gtccgcatta cttcaacctt ctgaagtacc tgccgttgag gaaaatgcag cggaaaccgt
    19261 tgccgatgat ttgtccgcac tgttgcaacc tgctgaagca ccggccgttg aggaaaatgc
    19321 agcggaaatc actttggaaa cgcctgattc caacacctct gaagcagacg ctttgcccga
    19381 cttcctgaaa gacggcgagg aggaaacggt agattggagc atctacctct cggaagaaaa
    19441 tatcccaaat aatgcagata ccagtttccc ttcggaatct gtaggttctg acgcgccttc
    19501 cgaagcgaaa tacgaccttg ccgaaatgta tctcgaaatc ggcgaccgcg atgccgctgc
    19561 cgagacagtg cagaaattgc tggaagaagc ggaaggcgac gtactcaaac gtgcccaagc
    19621 attggcgcag gaattgggta tttgattccc aactgccctt tcgcagatca aggatgccgt
    19681 ttcagacggc atcttttttt gccttatcgg tgtaacggat aaagtttgaa ccggcacagg
    19741 ctcaaacagc aggccgacgg caacaaaatg ccgtctgaaa cccctaaagg cttcagacgg
    19801 cattggcggc ggcggtatca ggcagtttga taggcaaccg aatcgtcacc gcttttcttt
    19861 tgaatgaact cgattttgta tccgtcgggg tcttcgacga aggctatcac ggttgtgccg
    19921 tgtttcatcg ggccggcttc gcggacgacg tttccgccct gccgcttcac acgttcgcag
    19981 gcttcgtagg catcgtccac ttcaaccgcg atgtgtccgt aggcgttgcc caagtcgtat
    20041 cgttccgtat cccagttgtg cgtcagttcc aaaaccgtgc tgtcggtttc gtcgccgtaa
    20101 ccgacgaagg caagggtaaa tctgccttcg ggataatctt ttcggcggag cagtttcata
    20161 cccaaaacgt tttggtagaa atcgagggat ttttcgagat tgcccacgcg gagcatagta
    20221 tggagtaagc gcatttttgt gttcctctcg gtagtggtta aacttcgatt ttgtttggcg
    20281 taaacgtctg ccatttgttg caggcaggac aatgccagaa aaagacttgt gatttgaagt
    20341 ggcagtttcg gcaccggtac atcacgctgc gctgtagctg ccgtccgata accgaacgca
    20401 tcatatcggc atcggctttc caagccggat ccaaatcgct gagtttcaaa ccaagcaggc
    20461 ggtacacgcc gttgaggtcg ggcttgcggc ggacaagctc gacggcggtt tgcgcggctt
    20521 ctttctcgca cttaagcagc agggatttct cgtacacgac attgatcagg tcaagttcgg
    20581 gaaacgtctg catatatcct gtcagacggt tcaagccttc ttcaggtttt ccctgcgcgg
    20641 cataggcttc gtaaagcttc tcgccgacca tgctcaagta tgcatggttt tgctgctcga
    20701 tggcggcata ggcttcgacg gcggcaggga aattgccttg tcggtgttcg atgtcgccca
    20761 aaatcatgtt ggcacgggtg cattttttgt tggcttcgag tgccttgccg acattgaaac
    20821 gcgcgacatc gaaattggac ttgaacagcg cggcttgggc aagttcgcaa taaaactggg
    20881 cgatttcaaa ctgataggtc tgatcgtcat ggctgagcag ccgggcggtt tcaaccgctt
    20941 tttcccaatc cctgtcctgt tggtagatat tgagcaggtg ctgtctggct tcacgcgcca
    21001 ttttaccgtc ttgcagcccc aaaaaaatct gttcggcacg atcgaccaac cccgcacttt
    21061 ggtagttttg cgccaattca aacaggacgc gcgcgcgctt ttcgccgacc gtatcgggag
    21121 aatcgagcat tgtccggtgt atgttgatgg ctttgtcgtt ttcgccacgc tgacggtaaa
    21181 gcttgcctag ggtgaggttt aggtcgtatg actgaggctg ctgatcaatg acctctgcca
    21241 attccctggc ggcacgtccg ctgttgcggt caaccaaggc atccagactt ttataaaatc
    21301 ccgacggtat gctttttgcc tgctttaata cagtcttcat atccacacgg gcggcaaacc
    21361 agcccatcgc gaagaaaacg ggcaaaagga taatcggcag caggataatc cacaattcat
    21421 tgtccatatc ggctttctca aggctgtttg gcagattcgg gcgcattttg cgccggtggt
    21481 gcggtcagct ctttccccgt caaacgcgca tttttcttta cttcggcacg caacctgccg
    21541 ttctcgccac gtaacgacaa caaccgtccg aacaaggcaa acattccaaa aacaataccg
    21601 actacaaatg cgccgaacaa tacgacaatc agcggcaaat cgaatttttg ccccggcagg
    21661 taggaaaagg taacggcatc cgtattaatg acggcaagca gcaggaagag cagcaggata
    21721 atgattttga tgacggtata gataagtttc atgtttgctc cgtaaataaa aacgccgccc
    21781 ggacagcttc gcactctgaa ccaagattgc gctagtttaa acgatttgca cggtttcgga
    21841 taggatgcgg cagcgtgttc ggacgacata cggagtatgc gattgccgac aattttacca
    21901 aatacaccgt tcctttccat ttgaaaaata acggattgga caccgcatcg acagaaaaac
    21961 ccgccgcgca cttgtcaaaa ccctgtttgc aggcgtatct ttacaatctt caaattcaaa
    22021 ccgttcattg aaacatatca gaataagaaa ggctttacat catgagcaga cccgtacccg
    22081 ccgtattcgg cagcgttttt cacagtcaaa tgcccgtcct cgcctaccgc gaaggcaaat
    22141 ggcagccgac cgaatggcaa tcttcccaag acctctccct cgtaccgggt gcgcacgccc
    22201 tgcactacgg cagcgaatgt ttcgagggac tgaaagcctt ccgtcaggca gacggtaaaa
    22261 tcgtactgtt ccgtccgact gccaatatcg cgcgtatgcg gcaaagtgcg gacattttgc
    22321 acctgccccg ccccgaaacc caagcctatc tcgatgcttt ggtcgaactg gtcaaacgtg
    22381 ccgccgacga aattcccgat gcgcctgccg ccctgtacct gcgcccgacc ttaatcggta
    22441 ccgatcccgt catcggcaag gccggttctc cttccgaaac cgccctgctg tatattttgg
    22501 cttcccccgt cggcgactat ttcaaagtcg gctcgcccgt caaaatttta gtggaaaccg
    22561 aacacatccg ctgcgccccg catatgggcc gcgtcaaatg cggcggcaac tacgcttccg
    22621 ccatgcactg ggtgctgaag gcgaaagccg aatacggcgc aaaccaagtc ctcttctgcc
    22681 cgaacggcga cgtgcaggaa accggcgcgt ccaactttat cctgattaac ggcgatgaaa
    22741 tcattaccaa accgctgacc gacgaatttt tgcacggcgt aacccgcgat tccgtactga
    22801 cggttgccaa agatttgggc tataccgtca gcgaacgcaa tttcacggtt gacgaactca
    22861 aagctgcggt ggaaaacggt gcggaggcga ttctgaccgg tacggcagcc gtcatctcgc
    22921 ccgttacttc cttcgtcatc ggcggcaaag aaatcgaagt gaaaagccaa gaacgcggct
    22981 atgccatccg taaggcgatt accgacatcc agtatggttt ggcggaagac aaatacggct
    23041 ggctggttga agtgtgctga tgctttaaat aaaaaaatgc cgtctgaaac ccgtttggcg
    23101 tttcagacgg cattttcgcg ttcggaccat ttccgctgca cctgcagcaa gtcgggcatt
    23161 tccctagaaa tacgcttcag acagcaaacc gccgcccgaa accgatacgc ggtacggacg
    23221 gcgcacggat ttgaaaacgg cggattatcc ctcggtgctc aaggcattaa tgctgtaacc
    23281 gccgtcaacg taagtgattt cgccggtaat gccggacgac aggtcggaca gcaggaaggc
    23341 ggcggtattg ccgacttctt caatggtaac gttgcggcgc agcggattgt gggcggcgac
    23401 gtgtcccaaa agtttgccga aatcggcgat accggaggcg gcaagcgttt taatcgggcc
    23461 ggcggaaatg ccgttgcagc ggatgccttc tttgcccaga caggcggcgg taaaacggat
    23521 gcccgcctca aggctggctt ttgccatacc catcacgttg taatttggaa tcgcgcgcac
    23581 cgcgcccaag tagctcaggg caacgatggc ggagtttctg ccgcgcatca tcggacgggc
    23641 ggcttttgcc aatgcgggca ggctgtatgc ggaaatttcg tgtgcggtgt tgaacgcttc
    23701 gcggctgatg ctgtcgagga agtcgccgct caaggcttct ttcggcgcga agccgatgga
    23761 atgcaccaaa ccgtccaagc cgtcccaatg tttgcccaag tcggcgaaca cttggttgat
    23821 ttcgtcgtcg ctggcgacat cgcagcggaa tacgagttcg gaacccaatt ccgccgccat
    23881 tttgcggacg cgctcttcca gtttgtccac aacgtaggta aacgccagtt ccgcgccttg
    23941 ttcgcggcag gctttggcga tgccataagc gatggaacgc tcggaaatca tgccggtaat
    24001 cagaattttt ttgccttgca gaaaacccat tttgtatcct tcaaatagtg ttcggttcat
    24061 tctaaaccgt tgattatagc aaattgtccc tgtttctgtg ttttcacgtt gcagcatgca
    24121 aacggcaatg ccgtccgaag cggatttcag acggcatcgg acgtttcaaa tacggtttaa
    24181 ggcatcagat gccgcgcaac aattcgttca cgctggtttt cgcacgggtt tgcgcgtcca
    24241 cgcgtttgac gatgacggcg cagtaaaggc tgtggctgcc gtctttggaa ggcatactgc
    24301 cggacacgac gaccgaaccg gccggtacgc gaccttggta gatttcgccg gtggtgcggt
    24361 cgaagatttt ggtggattga ccgatgaaca cgcccatcga aatcacgctg ccttcttcga
    24421 caatcacgcc ttcgacgatt tcggaacgcg caccgatgaa gcagttgtct tcaatgatgg
    24481 tgggtgcagc ctgcaggggt tcgagtacgc cgccgatgcc gacaccgccg ctcaagtgga
    24541 cgtttttgcc gatttgcgcg caagagccga cggtcgccca agtatcaacc atcgcgcctt
    24601 cgtcgacgta tgcgccgatg ttgacgtaag acggcatcag cacgacattt ttcgccacaa
    24661 agctgccgcg tcgggcaacc gcacccggaa cggcgcggaa gcctgcgttt ttgaactcgt
    24721 cttcagacca gtcggcaaac ttggtcggca ctttgtcgaa gtatttgttc acgccgtcgt
    24781 tgaggacttc gttgtcttgg atgcggaagg acagcaacac ggcttttttc gcccattcgt
    24841 tgactttcca ctcgcccacg cccaagcgtt cggcaacgcg cagtttgcct gaatcgagtt
    24901 ggcggatggt ttccaacacg gcttctttaa cttcgggagc aacagtggac ggggtgatgt
    24961 ccgcgcggtt ttcaaaggcg gtttcgataa tgttttgcaa agacataatg tttccttatg
    25021 tgagatgttt cgtgggacgc ttgccggtat tttcaagcag tatgttcatt tgaaatgaat
    25081 gcgctattgt gccacgcaaa cgcatattcg tcagcaatac gcgggcggtt gccgaacatt
    25141 ggcgtttcgg aatcgggcgg gcggcaggta ttgccttttc cgcgcccgaa tcaatacaga
    25201 aaggcggcag tacttttatg ccgcgccgcc gcctttcaga cggcattcgc ggtaaaacgc
    25261 catcagccct tcggtcgagg catcgtgtac ggacgtgccg ccttccagtt cgccgatgat
    25321 ggttttcgcc aactgtttgc cgtattccac accccactga tcgaaggggt tgacgttcca
    25381 tatcgtgcct tggacgaagg ttttgtgttc gtaagccgcc atcagcatac ccagattgta
    25441 gggcgtgagg cggtcgagca ggatgctgtt actggggcgg ttgccgggga actctttgtg
    25501 cggcgcgagg cgttcgcgtt ccgcttcggg caaatctgcc aattcggcgc gtgcttcgtc
    25561 caaggttttg cctttcatca gggcttcagc ctgtgcaaag gcgttggcaa cggtaaaacg
    25621 gctgcgtcct tcctccacgc cctgcgccgt catcgggacg ataaagtcgc agggaatcag
    25681 gcgcgtgcct tgatgaagca gttggaaata ggcgtgctgg cagttgaccc cttcaccgcc
    25741 gaacacgatg ccgcccgttt tgcacacggc gggactgccg tctgaagcgc ggcttttgcc
    25801 caaactctcc atatcgagct ggttcagcca cgccggcagc aggcgcaggt tgtggctgta
    25861 cggaacggcg gtctgcccgt ccgcgtgttg gaaattgtta taccacacgg caatcagtgc
    25921 catcagaacg ggaatgttgc ggcgcggcgg cgtgtggaaa aaatggctgt ccatcgcgtg
    25981 cgcccccgcc aacaactcgc ggaaacgcgc cccgccgacc gcaaccatca cgggcaaacc
    26041 gacgggcgac cagacggaat agcgtccgcc cacccagtcg tacatcgcaa acacgcgttc
    26101 cgccgcgata ccgaaagccg cagctgccgc agtgtcggca gacaccgcgc aaaaatggca
    26161 cgccgtttcg gattccgaga accccgcacc gcgataccac gccttgactg cctgtgcatt
    26221 gagcagggtt tccggtgttt tgaaggactt gctggcaacg caaaacactg tcgtttcggg
    26281 gttcagacgg cataaaaccg catccaggca ggcaggatcg gcgttggcgg caaaatggac
    26341 ggcgatatgc cgtctgaacg gctcaagtgc ctgcacgcac attgccggcc cgaggtcgga
    26401 tccgcctatg ccgatgtgga caaaatccgt aatccgtttt ccggttgtcc cctgatacga
    26461 accgtcgtcc aaactgtgtg caaacttcaa cgcacgattt aactcgcggc ggatttcggg
    26521 caacacgtcc ctgccgtccg cataaacggc acccgcaccg tcgggcaggc gcaaagccgt
    26581 atgcagcgcg gcacgcccct cactgttgtt gaccttcgca cccgtccgca aagcacgcat
    26641 tttcccttcc aaatccgccg catcggcaag attgcagagc agttgcagcg tatcttcgcc
    26701 caaacggttt ttgctgtaat cgaacaacat cccgtccaaa cgctcgtgca tacgctcaaa
    26761 acggtcgggt tcgcaggcaa agcggtcgcg caaaaggaca tgacgcgtat cctgataatg
    26821 gcgttcgagc gcatgccatg cacgggtaaa agcattcatc tgttttcctt gatttttcag
    26881 aaccggatta aaatgtagca gaatgtagtt taacaaacgg cagcggcttt ggcgaatctc
    26941 cggaacaccg cccgccgcgt ccaatagcac cttatttcca tatggcgaaa atatagtgaa
    27001 ttaacaaaaa tcaggacaag gcggcgagcc gcagacagta caaatagtat ggaaccgatt
    27061 cacttggtgc ttcagcacct tagagaatcg ttctctcttg agctaaggcg agccaacgcc
    27121 gtaccggttt ttgttaattc actataccct ccggccggca tttgacccgc aacaatatcc
    27181 tgcaagattt attgtgtacg cataaatgcc ggacagccgc ctaaataagg tataatcgca
    27241 tccgattctg tcccgtttgc cgcccgcagg cgggatgtcg gcggttttca tcttaccggg
    27301 aacacgccgg tactgttttt taacgatgtt tcttacattt tattccaatt actttacggg
    27361 gctagaatat ggctaaaaac ggaggatttt ctttgttcgc aaagaaagaa aaacgcttta
    27421 tctttgaagg caggcattcc gcctccgaca aactggtcaa cggcgaagta tccgcgttta
    27481 ccgaagaaga ggcgcgcaaa aaactggcaa aacgcggcat ccgcccgttg cagattaccc
    27541 gtgtgaaaac aagctccaag cgcaaaatca cacaagaaga catcaccgtt ttcacccgcc
    27601 agctgtccac gatgattaaa gcgggcctgc cgctgatgca ggcatttgaa atcgtggcgc
    27661 gcggacacgg caacccgtct atgacggaaa tgctgatgga aatccgaggc gaagtggaac
    27721 agggcagctc gttgagccgc gcattctcaa accacccgaa atatttcgac cgcttctact
    27781 gcaacctggt tgcggcgggc gaaacgggcg gcgtattgga aagcctgctg gacaaattgg
    27841 caatttacaa agaaaaaacc caggccatcc gcaaaaaggt aaaaaccgcg ctgacctatc
    27901 cggtatccgt catcgccgtc gccatcggtt tggtattcgt gatgatgatt ttcgtactgc
    27961 ccgcctttaa agaagtttac gccaatatgg gcgcggagct tcccgcactg acccaaacag
    28021 tgatggatat gtccgacttt ttcgtctcat acggctggat ggtgctgatc gcactgggct
    28081 ttgccatata cggcttcctt aaattgaagg cgcgttcgat taaaatccaa cggcgtatgg
    28141 atgccatact gctgcgtatg ccgattttcg gagacattgt ccgcaaaggg acgattgccc
    28201 gctggggcag gacgacggcg acgctgattg cggcaggcgt gcctttggtc gatgtattgg
    28261 actccactgc cggcgcggcg ggcaatttaa tctatgaaga agccacccgg gaaatccgta
    28321 cgcgcgtcat ccaaggtttg tctatgactt cggggatgcg tgcgacggaa ctgttcccca
    28381 atatgatgtt gcagatgtct tccatcggcg aggaatcggg ttctttggac gatatgctca
    28441 acaaagccgc cgaattttac gaagacgagg tggacaatgc ggtcggcagg ctgtccgcta
    28501 tgatggagcc gatcattatc gtgattttag gcttggtcat cggcacgctt ctggtcgcca
    28561 tgtatctgcc gctgtttaat ttgggcaacg tggtcgcctg atttgccgca cagatccggc
    28621 gcggattcgc tctgcgccgg tttgtttttg ttttgaatac attgagaaca aaatatgtct
    28681 gatttgtctg tattgtcgcc gtttgccgtg cctttggcag cggtgttcgg gctgctggtc
    28741 ggaagtttct taaatgtcgt catttaccgc gtgccggtca tgatggaacg cggctggacg
    28801 gtatttgcca aagaatattt aaacctgccg ctgaccgaag aggaaagccg taccttcaac
    28861 ctgatgaagc cggattcctg ctgtcccaaa tgtcgcgtgc cgatacgcgc gtggcagaac
    28921 atcccgattg tcagctacct gctcctgcgc ggcaaatgcg cttcctgcca aaccaaaatc
    28981 agcatacgtt atcccttaat cgagctgctg accggcgtat tgttcgggct gatcgcctgg
    29041 caatacggct ggtcttggat tacgctgggc ggattggtac tgaccgcgtt tctgatttcc
    29101 ctgaccttta tcgatgcgga cacccaatac ctgcccgact cgatgacact gctcttgatt
    29161 tggctgggac tgatatttaa tttggacggc ggcttcgtgc ctttgcagtc tgccgtttta
    29221 ggtgcggttg ccggctatgg ttcgatatgg cttttatgcg cggtatataa actgattaaa
    29281 ggcgaaaccg gtatgggcaa cggagatttc aaactgattg ccgcattggg cgcgtggctc
    29341 ggcatatccg cattgcccgt gctgattttt gtttcctcgc tgatcggttt ggtcgcggca
    29401 atcgttatgc gcgtcgccaa ggggcagcat tttgccttcg gccccgcact gacagtttcg
    29461 ggctggataa tttttacggc aaacgattcc gtatggcggg cggtcaactg gtggctgacc
    29521 catccggtgc tgtaagatga cggtatgggt cggactgacc ggcggaatcg gcagcggcaa
    29581 atcggcagcc gcgcaatgtt ttgccgattt gggcgtgccg cgcatcgatg cggacgcggc
    29641 ggcgcactcg ctgacggctt cagacggcat cgccctgccg gaaatcaggc ggctgttcgg
    29701 cgacaccgtt ttcgacacac agggtttgtt gcggcgcgac atattgcgta aagaagtctt
    29761 tgcctcccca tcgcaaaaag ccttgctcga atccgtgatg ttgccgctga ttttctcaga
    29821 aatcaaaaag cagcaagaaa cctttaccga tgcggcttac ggcattgtcg aaattccgct
    29881 gctgacggaa aagcgtcaat ttatcagcct gatacggcgt gtcctgacca taagcgcacc
    29941 tttggaaaaa cgtatcggca gggtgatggc ccgcagcggg ctgacgcgcg gcgaagtggc
    30001 ggacatcatc agccatcagg catccgaatc cgaacgcctg ctgcttgcag acgatgtgct
    30061 gctcaatgac ggcagcctca aaagcctgcg tgagaaaaca atgcgcctgc acgcgtttta
    30121 ttcagggatt ttcgcctcaa aaccaacaca aggaaaacac aatgactgaa tcgcggcaaa
    30181 cacgccttca agtcaaatgt ccgacctgtc aaacagcagt agtatgggaa cccgaaaacg
    30241 cattccgccc cttctgttcg caacgctgca aactgatcga cttgggcgga tgggcagacg
    30301 ggaaatatac ggtttccggc caaacggaaa gtttgccgga aatatccgaa cccgacatgg
    30361 cataccgctg accgccccgc cttcccggca aacaccctga aagtcaaatg ccgtctgaaa
    30421 caaacacgct tcagacggca ttttcattct caaacctaat cgttggtatt tgccgttacc
    30481 tcttccaatg aagtaatgcc ctgcataact ttcaaaatac cggcccggcg caaatccacc
    30541 ataccctcct tataggcaac gtccaaaata tccacttccg taccgttgtt cataatcaca
    30601 cgctgcattt cttcgctgat gggcataacc tcatacacgc ccgcacgccc cttataaccc
    30661 tgcccccggc aacggtcgca accgacggcg cggtaaagtt tccaatcttt tgcaaggtcc
    30721 tcatcggtga agccgacttc cttcaaagca gaggcagacg ggcgttccac ttcctgtttg
    30781 cagctcgaac acagcctgcg taaaagacgc tgcgccataa tcaggctgac cgaactggca
    30841 atattaaacg gcgcgacacc catattcagc atacgcgaca acgtcgccgg cgcattattg
    30901 gtgtgcaggg tggaaaacac catatgccct gtttgtgccg ccttaatcgc aatatcggca
    30961 gtttccaaat cacgaatctc accgaccata atgatgtccg ggtcctgacg caggaaagac
    31021 ttcaaagcag cggcaaaagt caggccctgc ttatcattga cgttaacctg attgatgccc
    31081 ggcaggttaa tctcggcagg gtcttccgcc gttgcaatat ttaccgactc cgtattcaaa
    31141 atattcaaac aggtatagag cgacaccgtc ttacccgaac ccgtcggacc ggttaccagc
    31201 accatcccgt agggacggtg aatcgcttcc aacaacaatt ttttctgaaa cggctcaaaa
    31261 ccgagctggt cgatgttcaa agacgcggca tcggaattca aaatccgcat cacgaccttt
    31321 tcgccaaaca gcgtcggcaa tgtgctgaca cggaaatcga caggcttgcc gcccttttga
    31381 aaggtcagct gcatcctgcc gtcctgcggt atccgttttt cggaaatgtc caaacgcgac
    31441 attaccttaa tccgggaagc aagctgcccc cttaccgcaa tgggcggctg aaccacctcg
    31501 cggagctgcc cgtccacacg gaaacggata cgggcattgt gttcgtaaaa ctcgaaatgg
    31561 atgtccgatg ccccgctgcg caaggcatcc gacaaagtct tatggataaa cctcggaaca
    31621 gggccgtctt ctgcctcctc gttgtcgata tacagggtgt ggctttcctc ttcctcctgc
    31681 ccctccccaa gctcctgaag cagcgatgtc gaacgcgaac ccacccaatc gagcaaaccc
    31741 gccaactggt catcctcgac aatgaccaac tcaacctcaa tccctgcggc agaaacggtt
    31801 ttctgaattt gcggcatctg tgtcggatcg gaaaccgcaa aaaatacttt gtcgccccga
    31861 cggaaaaccg gcacacagtg gaactccacc atctgctcct ccgtcaacac ccccatcagc
    31921 accctgtggc gcggataatg acgcaaatca agaatcgaat aactgaacac cctcgcaatc
    31981 aatgccgcaa gcgacttggg cgaaatgaca ccgtctgaaa acagcatcgg caacacttcc
    32041 ttacccgcct gcgactcatt gtagtaatgc tcggcctgct caacagtaac cacctggttt
    32101 tgaaccagaa tcctcagcaa acctacgctc atacgacctt atccccaaat ttattcattg
    32161 ttatacctgt acagctt
//
LOCUS       DAWEYF010000005        27498 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.005, whole genome shotgun sequence.
ACCESSION   DAWEYF010000005 DAWEYF010000000
VERSION     DAWEYF010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27498
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.005"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(220..1995)
                     /gene="ptsP"
                     /locus_tag="WGN93_000172"
     CDS             complement(220..1995)
                     /gene="ptsP"
                     /locus_tag="WGN93_000172"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ0226146.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIAKVIRCEDE
                     EKSEKLIKQMNSVSVEEEADFKGRK"
     gene            complement(1995..2264)
                     /locus_tag="WGN93_000173"
     CDS             complement(1995..2264)
                     /locus_tag="WGN93_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ0226147.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            complement(2333..2770)
                     /locus_tag="WGN93_000174"
     CDS             complement(2333..2770)
                     /locus_tag="WGN93_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ0226148.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            complement(2851..3414)
                     /locus_tag="WGN93_000175"
     CDS             complement(2851..3414)
                     /locus_tag="WGN93_000175"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ0226149.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            complement(3483..4307)
                     /locus_tag="WGN93_000176"
     CDS             complement(3483..4307)
                     /locus_tag="WGN93_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ0226150.1"
                     /translation="MIKKTIGGIIPIFMAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISAAVRS
                     ASSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRARTDR"
     gene            4399..5031
                     /locus_tag="WGN93_000177"
     CDS             4399..5031
                     /locus_tag="WGN93_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ0226151.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            complement(5237..7021)
                     /gene="rmuC"
                     /locus_tag="WGN93_000178"
     CDS             complement(5237..7021)
                     /gene="rmuC"
                     /locus_tag="WGN93_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ0226152.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     QGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYVAEDEAV"
     gene            complement(7395..8180)
                     /locus_tag="WGN93_000179"
     CDS             complement(7395..8180)
                     /locus_tag="WGN93_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ0226153.1"
                     /translation="MKQTLKNWFAALLLAVPMSAAVASGGGHYEKVDIDLRDQVSLQH
                     GAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDAA
                     KWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQG
                     VQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNY
                     LVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLNKEFSKDIH"
     gene            complement(8195..9544)
                     /locus_tag="WGN93_000180"
     CDS             complement(8195..9544)
                     /locus_tag="WGN93_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ0226154.1"
                     /translation="MANQTNSKAKALLGWVDARFPLSKMWKEHLSEYYAPKNFNFWYF
                     FGSLSMLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKLKDENGVPLDGIPFFPYYVVHDILAVTIFLIVFCAVMFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFAGTQVWGVIGMGA
                     AVVLIALLPWLDKGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITVVGAYLFATNI"
     gene            complement(9563..10144)
                     /gene="petA"
                     /locus_tag="WGN93_000181"
     CDS             complement(9563..10144)
                     /gene="petA"
                     /locus_tag="WGN93_000181"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ0226155.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            complement(10267..11016)
                     /locus_tag="WGN93_000182"
     CDS             complement(10267..11016)
                     /locus_tag="WGN93_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ0226156.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            11147..12076
                     /locus_tag="WGN93_000183"
     CDS             11147..12076
                     /locus_tag="WGN93_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ0226157.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            complement(12332..12724)
                     /gene="rpsI"
                     /locus_tag="WGN93_000184"
     CDS             complement(12332..12724)
                     /gene="rpsI"
                     /locus_tag="WGN93_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ0226158.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(12734..13165)
                     /gene="rplM"
                     /locus_tag="WGN93_000185"
     CDS             complement(12734..13165)
                     /gene="rplM"
                     /locus_tag="WGN93_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ0226159.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(13343..13522)
                     /gene="ssrS"
                     /locus_tag="WGN93_000186"
     ncRNA           complement(13343..13522)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WGN93_000186"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(13528..13833)
                     /locus_tag="WGN93_000187"
     CDS             complement(13528..13833)
                     /locus_tag="WGN93_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ0226160.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(13844..14173)
                     /locus_tag="WGN93_000188"
     CDS             complement(13844..14173)
                     /locus_tag="WGN93_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226161.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(14228..15217)
                     /locus_tag="WGN93_000189"
     CDS             complement(14228..15217)
                     /locus_tag="WGN93_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ0226162.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(15340..18042)
                     /gene="ppc"
                     /locus_tag="WGN93_000190"
     CDS             complement(15340..18042)
                     /gene="ppc"
                     /locus_tag="WGN93_000190"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ0226163.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQTAYPDVRVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVTELFQHAGLEDYNSLNEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            18085..18978
                     /locus_tag="WGN93_000191"
     CDS             18085..18978
                     /locus_tag="WGN93_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ0226164.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSDAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADFDTVELHNLQRQVAFDEGDVGKLKTEALADRLHHINHTVDVRTVNEKLDSGRL
                     TGLVQTADIVLDCCDNYATRQAVNRACVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGCTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWRYFDLPRNPECPVCGAAR"
     gene            complement(19533..19757)
                     /locus_tag="WGN93_000192"
     CDS             complement(19533..19757)
                     /locus_tag="WGN93_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ0226165.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(19758..21146)
                     /locus_tag="WGN93_000193"
     CDS             complement(19758..21146)
                     /locus_tag="WGN93_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ0226166.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLTGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(21232..22053)
                     /gene="prmC"
                     /locus_tag="WGN93_000194"
     CDS             complement(21232..22053)
                     /gene="prmC"
                     /locus_tag="WGN93_000194"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ0226167.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(22043..22504)
                     /locus_tag="WGN93_000195"
     CDS             complement(22043..22504)
                     /locus_tag="WGN93_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226168.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            complement(22569..24053)
                     /gene="tldD"
                     /locus_tag="WGN93_000196"
     CDS             complement(22569..24053)
                     /gene="tldD"
                     /locus_tag="WGN93_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ0226169.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVHRFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILTGYMQDETNARLTGTQSTGNGRRESYASAPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      24128..24231
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            24297..25520
                     /gene="cytX"
                     /locus_tag="WGN93_000197"
     CDS             24297..25520
                     /gene="cytX"
                     /locus_tag="WGN93_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ0226170.1"
                     /translation="MSGNASSPSSSSAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            25517..26617
                     /locus_tag="WGN93_000198"
     CDS             25517..26617
                     /locus_tag="WGN93_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ0226171.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHIFVVGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            26638..27255
                     /gene="thiE"
                     /locus_tag="WGN93_000199"
     CDS             26638..27255
                     /gene="thiE"
                     /locus_tag="WGN93_000199"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ0226172.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIALCVAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLREYVKQARGTPVVA
                     IGGIDLNNAQAVLATGVSSLAVVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT         5937 a         7731 c         7304 g         6526 t
ORIGIN      
        1 taaaatctaa agaaaccgtt tttcccgaca agtttctgtg ccgacaaacc tagattcccg
       61 cctgcgcggg aatgacggat tttaggtttc tgattttggt tttctgtttt tgagggaatg
      121 accgattttg ggtttctgtt tcggttttct attttgcaag aatggcaaaa tttcagattg
      181 cgggcattgt taagtatttc tattttttac ctgccgtatt tatttccgcc ccttgaagtc
      241 ggcttcttcc tcgacagaca cgctgttcat ctgtttgatc agcttttccg acttctcttc
      301 gtcttcgcag cggatgactt tcgcaatatc gctttcgagc tgtccgacat tgctgtgcag
      361 aatgatgttt ttgacgggca ggatgttgtt ggggttcatg gaaaaacggc gcagccccat
      421 acccaataaa acgcgggtaa acgcggtatc gcccgccatc tcgccgcata cggatacgtc
      481 tttgtccatg cggttggcgg tacggatgac gtgttgcagc attttcagca cggcgggatg
      541 gccgggctgg tagaggtggc tgacgctgtc gtcgccgcga tcgacggaca agatgtattg
      601 aatcaggtcg ttggtaccga cggagatgaa atcgaccagt ttcaaaatac tgccgacggt
      661 cagcgcggca gacggaattt caatcataca gccgatgccg actttaccga aggcatcgcc
      721 gcgttcggca agctggcgtt gcgcggtgtc gaggtggatg aggcactggc gcacttcgga
      781 tacggaggta atcatcggcc acatcatccg cacggggccg tgtaccgccg cacggaggat
      841 ggcgcgcatc tgggtgcgga acatgaccgg ttcggcaagg cacaggcgga tgccggtcat
      901 gcccagcgcg gggttgaggc tgccgttggg cgtgctgttt ttcccgaacc agcgcgggtt
      961 tttgtccaca cccaaatcga ctgtccgtat cgttacgctt ttgcctttca tttttttgac
     1021 aatcgcgctg tacacttcgt actgctcgtc ttcagacggc atcgtatcgc ggttcaggta
     1081 aagaaactcg ctgcggaaca gcccgatgcc gtctgcgccg aggttgtgca gcggtttcac
     1141 gtcttcggcg gattctatat tgcccacaag ctcgatgcag accccgtcag cggtggcggc
     1201 ggcggttttt ttgagcttgt tcaaatcgcg tttgtggctg cggtattcgc gggcacggcg
     1261 gcggtattcg ttcaacaccg actcatccgg cgcgataatc aacacgccgt tgataccgtc
     1321 cacaatgacc gtttcgccct cggtaatcag tttgcgcgcg ttgtgcagcc cgacgacgga
     1381 cgggatgtcc aagctcctgc ccaaaatcgc cgtatgcccg gtggggccgc cggcatcggt
     1441 aacgaaggcg gcaatgcgct gctctttaaa caaaaccgtg tcggcgggcg aaaggtcgtt
     1501 tgcaatcaga acggtttcgt caaacaggtt gtcggcaact tccaactcgt tgccctgccc
     1561 gatcaggttg ttgtggatgc ggcggacgac ttgcagcata tcctgcttgc gttcgcgcaa
     1621 ataggcatcg tccatattgt cgaattgggc ggcgagtttg tcgctctgct gcttcaatgc
     1681 ccactcggcg ttgatttttt gttcccttaa aatatcgacg ggttcgcgcg acaaggtaac
     1741 atcggtcaag agcatcaggt gcagcgagat gaacgcgccc aactcggtcg gggcgttttc
     1801 gggaatcgcg ctgcggagct gttccaactc tttgcgcgtg gctttgacgg cggcatcgaa
     1861 acgttcggct tcggcatcgg tgtccgcctc cgcaacatca tactgcggca cttcctccgt
     1921 accgcgcgca atcaggtggg cgcaaccgac ggcaatgcct ttgcccgccg ccacgccgtg
     1981 cagcacgata ctcattattc gccctcgccg aagtagccgt tgattaagtc ggtcagggcg
     2041 cgcatcgctt ccgcctcgtc cgcgccgtcg gtttccagct cgatgaccgt acccttggcg
     2101 gcggcgagca tcatcagccc cataatgctt ttgccgttga cgcggctgtc gtttttcgta
     2161 acccagactt cgcttttgaa ttgggacgcg gtttgggtga acttgttgga cgcgcgggcg
     2221 tggagtccga gtttgttgat gatttcgatg gattgtttga gcatttcggt tcccgtgtta
     2281 tgtatatcgg cagcagacgc cgtttaaaat gttttcctgc cctgccgctt cttcagacgg
     2341 catcgccgct gcgccggcac accaaatctt cgggcgcgga cgtgatggcg aaaatgcctt
     2401 ttacagccgc ctctctgaca cattcggtaa aggcggcaag gtcttccgcc gccggcgaat
     2461 attggacggc cttaaccatc atcggcgcgt tcagcccggt caaaatcgcc gatttgtttt
     2521 cgcgcacgag gcggcgggct gcattgcagg gggtcgcgcc gaaaatatcg gtcataatca
     2581 gcacgccgtc gttgtcggga aactcctgaa gcgcggcaat ggcgttgttg atgatgtcgt
     2641 cttggtcttc cgtcggctgc acgccgagta tgcggacgtt ttcaggcagc ccgcccggga
     2701 aaaaatgatg tgccagcttg cggtaggctt cgcctatggt ttcgtgtgtg atgattaaaa
     2761 gccctatcat attatgcgtc ctgttcttca ttatcctgcc ggcgtatggg cgcgatgccg
     2821 tctgaaaggc cttcagacgg catcgcgtcc ttattttccg tccaatgcgt aaatctcgcc
     2881 caaattacgc cagcagcccg ccgcatccat gccgtaaccg aaaacataac ggttcggcac
     2941 atccagtccg acataatcgg ctcggatagg cttgggtttg tcgatcagct tgttggcgaa
     3001 caccgccgca cggcagcttg ccgcacccat ttccaaaagt ttggcttgaa tggcggacat
     3061 cgtatgccct tcgtccaaaa tatcgtccag cacgacgacg tgcctgcccc ggatttgttc
     3121 cgcatcgggc atacgcttcc agttgaacgc gccgccctcc agcttgtcgc cgtaacggga
     3181 aacgtgaaca taatcaaaat ctaagggaaa acgcaacagc ggcagcaact gccccgtaaa
     3241 caccaccgcg ccgcccatca cgggcagcag cagcggatat ttgccgccca aatcgcgcgt
     3301 aatctcgtcc gccacttttt gcagtgcggc acggcattgg ccttggtcga acaaaagatc
     3361 ggcgttttca agcatcgcct gtgtttcaag gcgtttggtt tctaaatcgg tcatatgtcg
     3421 gaatcggtcg gtaaaaggaa aattataaac caaagtatcg gctgccgtct gaaccgtcct
     3481 gctcaacggt cggtacgcgc gcgcacaaac gtggcgaatt tcggcgtgcc tttctgcgta
     3541 aagccacggt aacggtaggt aatcagcgta ccgattttgg gcgggttgtc gcggtctttg
     3601 tctttgaagc cgctgccgat gcggaattcg ccgtgtcggt ttttgcagcc gaccgcgccc
     3661 aaccgtccgg cgtttcgccc tttgccctca tagtgccgcg ttaccgtgca ttcgtcgtcg
     3721 tattggcttt tcagcttcaa taattggctg ctcctgccgc cgctgtaacg ggattcgggc
     3781 tgacgcagca tcacgccttc gccgccctgc gcttcgattt gttttaaaaa gtccatcgcg
     3841 tgctgccggt cgcgcacttt gatttgcggg atgatggtaa tcggcgcgtt cggatgcgtt
     3901 ttcagccact gcgttgcgac tgccaaacgt tggtagagat tgccctgcgc cttgggtaca
     3961 tcgaaaacgt gcaggcggat gccgcgccaa tctgaagaag cagaacgcac ggcggcggaa
     4021 atctgctcga actgaccgcg tccgctatac aattcgccgt ccaaaggata aggcggaaac
     4081 tgagcggtaa aacctttggg gggcgtaaac gcatagccct gacggcttat caggtgcttt
     4141 ccgtcccaat acgcgcgcac gccgtcgagt ttctcgctca tcgcccagcc ggcaatatcc
     4201 tgccctttgt attcctgcgc cagcatcaaa tccgccgcgc ctgccgatgc agggatgaaa
     4261 accgccataa aaatcggtat gatgccgccg attgtcttct taatcacccg attcccccaa
     4321 tatccaaaca ggcggcaaac cgccataaaa caaacggcaa acccgatgcc gtctgaaaaa
     4381 ccgtttagga acacgccgat gaccctacgt tacgaaatct tccccgttac ccccttccgc
     4441 caaaactgca ccctgatttg ggacgacgaa agtggcgaag ccgtcctgac cgatgtcggc
     4501 ggcgatgtgc cgttcctgct gcaagcgttg gcaaaccgca aacttacgct cacggcaatc
     4561 tggctgacgc acggccatct cgatcacgcg ggcggcgtgg tcgaaatgtt gaaaacgcat
     4621 aaagttcccg tcctcgggcc gcatccggac gatgaattcc tgctccaatc gctgccgcaa
     4681 accaccgcgc aatacggatt tcccgtctcg cccgcctttg cgccgaaccg ttggctcgaa
     4741 gaaggcgaaa cgctcacggt cggacgctat gcctttcaag tgctgcatat tccgggccat
     4801 acgccgggac atatcgtctt ttattgtgcc gaggcggaat tgctgattgc gggcgacgtg
     4861 ctgttttacg aaaccatagg cagaaccgat tttccgcgcg gcaaccacgc cgacttaatc
     4921 aataatatcc gcaacaaatt attcgccctc cccgaaaccg tgcaagttgt cgccggacac
     4981 gggcgtatga cttccatcgg acacgaaaaa cggcacaatc cgtttttcta accgacttca
     5041 ctacggtctt cagacggcgt catctgcact gatgccgtct gaaacgcaaa aggctcagac
     5101 aaccgccgcc ttgccggtgt acctcgccgg acaaggcttt ggtaagtact tcaaacaaac
     5161 cccaaatcag aaccggtaca gttacgccgc gctttcggca ttcccgcccc tgctgaaaca
     5221 agcttttccg cacaagtcag actgcttcat cttctgccac atattccaaa gattccgaca
     5281 acgccgttgt ttcattggca cgttcggtca aatcgcgtgc aagctgcttg tttgccttca
     5341 cgcccaacag acgcagtttc tcggcgcgtc cgaccagatt cccgcgcccc tcggcaagtt
     5401 gcttaaatgc cgtctgaaag ctgttttgcg cctgatcgat gcctttgccg acgctttcga
     5461 gcgtctgtac aaagccgaca aatttgtcgt acagcttgcc gccttcgtcc gcaatcgcca
     5521 gcgcgttttg gttttgctgc tcgttgcgcc aaatattcgc caccgtccgc aaagtcgcca
     5581 gcagcgtact ggggccgacc agcataatcc gtttgtcgaa acactcttgg aacaagccag
     5641 cgtcattctg caacgccaac aggtaggccg gttcgacagg gataaacata aagacgaaat
     5701 ccaatgtgtt cacaccttcc aaatcggtgt aatccttcag cgacaagcct ttcatatgcg
     5761 cgcgtatgct ggcgacatgc gccgccaact cgcgtgccgc cgtatccgca tccgccgcct
     5821 gcgtgtagcg cacataagct gtcagcgaga ccttggagtc aatcacaatc tgcttgttgt
     5881 cgggcaggtt gaccaaaacg tcgggctgga ggcggcgcgt gccgccgtct tcctcttttc
     5941 ggacggatgc tgcctgaacc acatattccc gccctttctg aaggccggaa ttttccaaaa
     6001 ccgtttccag aatcatctcg ccccaattgc cctgaacctt attctgcgta ccggtcagcg
     6061 cgttggtcag ggcctttgcc tcgctgtgca gctgcgcatt caatccttga agccgtttca
     6121 attcgttttc caacgtcagc cgctcgcgcg attctttatc ataggtttgc ttgaccaact
     6181 cgccgaaacc ttggatgcgt tcgtttagcg ggttcaaaac ctgatggagc tgctcccggt
     6241 tctgctcggt aaaacggcgg cttttttctt ccaaaatcgt gttggcaaga ttttgaaact
     6301 gatcgctcaa acttttgcgc gcctcgccca gcaaggacag cttctcttca gaagcaaggc
     6361 gttcctgttc gatttgcgtt gccaaacgtt cgttttcaac cgccaaaccc tgtgcctttt
     6421 cctgcaactc ggtatgcgac tgcctcaacc gctccgcttc cgcctctttt tcctgcaaat
     6481 gggcaatctg tttttcggct gcggcaaaac ggttgccgac atcggcaagg tcgttttgca
     6541 cgtcgcggac agtttggcgg ctttcttcca aatcggtttc gattctttgg cggatttggc
     6601 gttccaaggc atattggtcg gcaaacgcct tccgttcctg tccgagctgc gttgccaaac
     6661 gttcgttttc aaccgccaaa ccctgtgcct tttcctgcaa ctcgatatac gactgcttca
     6721 gccgaaccga ttccgcctct ttttcctgca aatgggcaat ctgcttttcg gctgcggaaa
     6781 aacggttgcc caaagcataa ttttcgtcct gcaaatgtcg gtatttcccg tccaaaacgg
     6841 ccaattccga tgcaatttct gcgtgtgcct gttcgacaaa atcacatctt gccgcctttt
     6901 ccgccagttg cgcgttcaaa tcggcaaact cgccctgaaa cctgcccttc atcagcaacc
     6961 atgtaaacaa cacgcccgac accaacgccg ccaaaggcag caaaacagtc atcagttcca
     7021 tcaatcatcc taatattcaa acattttcac accggacaaa accgccgctt attccgattc
     7081 tacctgtttg ttcgacatag ctccaaaaaa tatagcggat tggctttaaa cctgttcgac
     7141 atcgccttac catgctgctt gcggtttcag accttttcct aattcaatat caatctgcca
     7201 caaaccctga ttaagttccc gatgtctgac atttttagaa tgatgccgtc tgaaatgttg
     7261 cagctatgtt cagacggcat acggattcag gcttttcaaa cggcaggcaa aatgaaaaaa
     7321 gggcaaaccc taaaggattt gcccttttgt tccaaacgct tagtgtacgt ctttccaata
     7381 ttctttttta atgattaatg aatatcttta gaaaattctt tatttaggaa gtaagccaaa
     7441 ggcagcataa ccgcaaatag gaaaatcatc acgacatagc ctatacgttt gcgttgcagt
     7501 tgtgcaggtt cgcccatgta cacaaggtaa ttgaccaaat cgcgtacata tgcgtcgtac
     7561 tctttttgga tcactttgcc gttaggcagg cggcggctgt gcaaaccggt agattcccaa
     7621 tacagcttag gcttcatctc gccgtgttcg tcttttacca taaccggctg acctttggca
     7681 tccaactcaa cggcttgaac accttgttgc tcccacaacg ggtggggcat accgacttta
     7741 tcgaatacag tattgttcca gccgctcgga cgggtcggat ctttatagaa gccgcgcata
     7801 taggcgtaaa ggtagtctgc acctttggaa cgcgcaatca acgtcaaatc gggcggagca
     7861 gcaccaaacc attttgccgc atctttcggg ttcatcgccg aatgcatgac atcgccgaca
     7921 ttatcggtgg taaacatcag gtttttcttg atttcttcgt cagtcaaacc gatgtctttc
     7981 agacggttga agcgcatacc gcttgcagag tggcaagaca aacagtagtt tgtaaagatt
     8041 tgcgcaccgt gctgcaggct gacttggtca cgcaggtcga tatcgacttt ttcgtagtgt
     8101 ccgccgccgc tggcgacggc tgcactcata ggcactgcca gcaataaggc agcaaaccag
     8161 tttttcagag tttgtttcat tttcgctgcc ctcatcagat attggttgca aacaagtaag
     8221 caccaacaac ggtaataccg acgtaaacaa agaacatgat tttttgtttg gcggtgctca
     8281 tggttacgcg ttcgggaacc ggtttgtttt tatccagctt ggtatagaac ggcataccca
     8341 ggaagaatgc gaaatagacg aaggacagga tgcgcgcgac caaagtacgc gtatcggttg
     8401 ccaccatcgc gcccaaaata cccaaaccga taaaggaaat gatgaacaga accaatgcgg
     8461 ttttgaagat tgggccgcga tagcggacag atttaacctc gcctttatcc aaccaaggca
     8521 gcaaggcgat cagtacaact gctgcaccca taccgattac accccatacc tgagtaccgg
     8581 caaaggaagg aatcgcacgc agaattgcgt agaacggagt gaagtaccat accggcgcaa
     8641 tgtgcggagg tgttttcagc gcattcgctg catcgaagtt tggcgcttcc aagaagtagc
     8701 cgccgccttc aggtgcaaag aacatcacgg cacagaagac aatcaagaat atcgttactg
     8761 ccaatatatc atgcacaaca taatacggaa aaaaaggtat gccatctaga gggacaccgt
     8821 tttcatcttt cagctttttg atttctacac cgtcagggtt gttggaaccc acttcatgca
     8881 aggcaatgat atgagccaca accaagccga gcaataccaa aggtaccgcg ataacgtgca
     8941 gggcgaagaa tcggttcaaa gtaacatcgg aaacgttgaa gtcaccgcgg atccaagtgg
     9001 acaaatcagg accgataaca gggatggcgg agaacaggtt aataattacc tgcgcacccc
     9061 agaaggacat ttgaccccaa ggcaacaggt aacccataaa ggcttctgcc atcaatgcca
     9121 agaaaatcag ggaaccgaaa atccacacca attcgcgcgg ttttttgtac gaaccgtaaa
     9181 tcagaccacg gaacatgtgc agataaacga cgatgaagaa gaaagatgcg ccggtagagt
     9241 gcatatagcg gataatccag ccgccggaca cgtcgcgcat gatgtactct actgcggtaa
     9301 aggcagcagg cagatggtag gcgttaaggt tgccgtccgg tttgtagttc atggtcagga
     9361 aaataccgct gacgatttga atcaccagca ccagcataga caatgagccg aagaaatacc
     9421 agaagttgaa gtttttaggc gcatagtatt cagacagatg ctctttccac attttactta
     9481 atggaaaacg ggcatctacc cagcctaaca atgcttttgc tttgctattg gtttggtttg
     9541 ccataattat cgttccttat tcttagtctt cgcccaccaa gatagttgtg tcgctcaagt
     9601 atttatatgg cgggacaacc aggttggtcg gggcaggaac acctttatat acgcggccgg
     9661 ccaagtcgaa tttcgaaccg tggcaggggc agaagaagcc gcctttccag tctgcaccca
     9721 aatcggcggg ggcaatgtcg ggacggaagg tgggcgagca gcccaaatgg gtgcagatac
     9781 cgatggcgac aaggatgttc ggcttaatcg aacgggtctc gtttttagca tactccggct
     9841 gctgttccgc atcggaattg ggatcggtaa gttcgccgtt caggcctttc aggtctttaa
     9901 gctgctgatc tgtacggttg agcacccaaa tcggtttgcc ttgccactcg gcggtcagca
     9961 gctgacccgc ttcgatttta ctgacatcca cctcgacggc agcaccggcg gccttggctt
    10021 tttccgaagg gaaaaaactg gccacaaacg gcgttgccac acccaatgct gccactccgc
    10081 ccgcgccgca ggtcgcgagt gtcaggaaac ggcggcggcc gttgttgatt tcttgattat
    10141 ccattattca gtcgtcctaa tattttggga ataccgagcc attaaacgtt gcaattttac
    10201 ccagtttgca gtgatactca aagcattatt taaaataagg taaagtttta tgatatttct
    10261 caagactcaa gccggattgt tttcgtcaaa atggcacact tccaacccga aaacctctgc
    10321 cgccgattct gccagcgcgc gtacgccgta acgttccgtc gcgtgatgcc ctgccgaaat
    10381 gaaagccgta cccgtttcat tggcaaggtg gtattgggct tcagagattt cccccgtcaa
    10441 atacagatcg acaccttcgt ctattgccgt ctgaaaaaac ccctgcgccc cgccgctgca
    10501 ccatgcaacc cgtcggattt cgcgttcggg tttgccgatg acgacaggct tacgttgcaa
    10561 aactgtttca atatgcgccg ccaatgcgcc gagtgtcttg gcttgtttca ggctgcccga
    10621 gttgagcagg ttttgttcgc cgaaccgttt ttctgtcgca aaacccaatc tgtcggcgag
    10681 ttgggcattg ttgcccagtg tgggatgtgc atccaggggc agatggtagc ctgccatatt
    10741 gatgtcgtgc cgtaacagtg cggcaatccg ttcttttttc caaccagtaa cggtcggcaa
    10801 ctcgtttttc cagaacatac cgtgatgtac caaaagcaaa tctgccttct gctccacagc
    10861 aaaatcaatc gctgccctgc ttgccgttac cgacgtaacg attttcccga tatattccct
    10921 cccttcaacc tgcaaaccgt taggggcgta atctttaaac aacgctgtct gcaatgtttc
    10981 attacaccaa gtcagaaaat ccctgcgcaa taccatcttt tttcctaatc gctttaaaca
    11041 agcgggcatt ctaatcgcaa aatgtccgga attcacattt ttccgatttg cacccgcata
    11101 tgaattattt taatatgcgc cggttcaata tgccgtctga agccccatgg attccattat
    11161 cgaactgcgc cacctcaaga ccctgctggc acttgaagaa accggcagcg tctcccttgc
    11221 cgccaaacgg gttttcctta cccaatccgc tctttcccac cagatccgta tgctcgaaaa
    11281 ccactacggc acgccgctgt tcgaacgcaa atccacgccc ttgcgcttta ccccggtggg
    11341 cgaaaggctg ctgcgcctcg cccacgaact tatacctcaa gttgctgttg cagaatggga
    11401 tttggcgcga atcacggaag gagaggcggg agagctgcgg attgccgtcg aatgccatac
    11461 ctgtttcgac tggctgatgc ccgccatggg cgaattccgc ccgatgtggc cccaagtcga
    11521 attggatatc gtatcgggat tccaagcgga tcccgtcgga ctgctgctgc aacaccgtgc
    11581 cgaccttgcc attgtttccg aagcggaaaa acaaaacgat atttctttcc aaccgctgtt
    11641 tgcctacgaa atggtcggca tttgcgcacc agaccatccg cttgccgcca aaaacgtttg
    11701 gacggcggaa gactttatcg gggaaaccct gattacttat cccgttcccg acgagatgct
    11761 ggatttgccc aaaaaaatcc tgattccgaa aaacatcaac ccgccgcgcc gacacagcga
    11821 actgaccatc gccattatcc aactggttgc cagcagacgt ggcattgccg cccttcccta
    11881 ttggacagtc atgccctacc ttgaaaaagg ctatgtcgtc caccgccaaa ttactgccga
    11941 cggattgcaa agcaaactgt atgccgccat ccgtaccgaa gatacggaca agagctatct
    12001 gaacaatttt tgccaaatca tacgcgaacg cggttttgca gatttgcccg gactgagcga
    12061 attggaaccg gtctgacccc ttattcaacc atacccggca gtttttctat tttttcatgt
    12121 atagtggatt aacaaaaacc agtacagcgt tgcctcgcct tgccgtacta tttgtactgt
    12181 ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatactgttt ttgatttttg
    12241 cccaatctgt aatctttaga ttgccaatgg gaaaccgtct actacaaata aaaaaaccct
    12301 gcgataagca gggttttttg aatttccaac attaacgttt ggagaattgt tttgcacggc
    12361 gtgctttgcg cagacccggt tttttacgtt cgacttcgcg ggcatcgcgg gtaacaaaac
    12421 cggcttgaga caaggcgggt ttcaacgcgg catcgaagtc gatcagggca cgggtaatgc
    12481 cgtggcggat tgcgccggac tggccggttt cgccgccgcc aacaacattg actttgatgt
    12541 cgaaagattc ggcgttttca gtcagaacca agggttggcg aacaaccatt cggctggttt
    12601 cgcgtgcgaa gaattcgtca acgggacggc cgtttacgat gatttgacct gtacctttaa
    12661 tcaggaatac acgagccact gaacttttgc ggcggcctgt gccgtagtag tatttaccgt
    12721 tcatgtcgcg tccttatttc agttccaaaa ctttgggttg ttgcgcagca tgggcgtgtt
    12781 ccgcacccgc atacactttc agttttttaa tcatggcgta acccaaagga cctttgggca
    12841 gcataccttt tacagcttgt tccaaagcgc ggcccgggaa ttgctcttgc atttcgcgga
    12901 aagtgcgttc gtagataccg cctgggaaac cggaatggcg gaagtatttt ttatcttcga
    12961 atttggcacc ggttacacgc agtttgtccg cattgataac aatgatgtaa tcgccggtat
    13021 cgacgtgggg ggtgtattca ggtttgtgtt tgccacgcag acggctggcg acttcggccg
    13081 caacgcgacc caagactttg tcttgggcat cgatgacgaa ccattcgcgc ttcacctcgt
    13141 ggggtttcgc tgaaaaggtt ttcatagtgg aaatccaaat agatatagaa agttgtaaat
    13201 tttaaagaca ggattcgatt ttgtcaatcg cattaccgcg ttacggaagg attttccgga
    13261 tttcggcaga ctgcatactg ctttttcggg cggggcggcg gccaatgtga aaaaccgcat
    13321 cgttgcgatg cggttttgaa tgggaatccc cgcgagagcc gtttcggccg aatccgcttg
    13381 aaccttgctg acaaggcggc tgcctcgggt agtttcgggt gcgtccgcaa aaggacgctc
    13441 gcgcccacta ctgctcccgg caaccttaag cgaacttatt ggttcaaagg aatatatgcc
    13501 ttcgcggaca ccgcagggaa aaaggggtta ttcctgcgcc aagcgggata gtgctttttg
    13561 gcaggcgttg tccatatcgg ctattttacg cgcaaaatcg ccgattgcca aatcgccgcc
    13621 gttcagggag gttttcaaca ggtcgtggac gacgttgagc gcggccataa tgacgatttt
    13681 ttcgctgtcc gcgacgcgtc cgccttcgcg gatggcttcg gctttgccgt tgagcattcc
    13741 gactgcctgc aacagtgtgt ctttttcttc tgccggcgtg ttgacggtca gccgggcgtg
    13801 catgacttcg atgtggactt gttcgatgtt catcctttaa tccttattgc tgcgtttcct
    13861 gccattgggg gaggcgcgct gccagtgcgc tgattttttc cctgctctgt tcgagcaggc
    13921 tgcggtatcg tgtattttct tctgtcaggc tgtcgatttt gttttgcagg tcttctttga
    13981 gtttgccgac ttggacgagc agggcttcgc tgagttcgtc gacggcggtt tcgtgttcga
    14041 gtttttgccg ctcgtgcgcc cgtttgagtt cggcgacggt ttctttgagg cggcggtttt
    14101 cgctgacgag ggtttcgaat ttttgtacca gcgtataaac gctgctttcg agtttttcga
    14161 tattttgttt cataacctta cctgtccgta tgccgtctga aggcctcaga cggcatctgt
    14221 ctgttgttta ttcaaaacgc gcgctgcgtt ccatcagtct ttcgacaacc tgttgcgggg
    14281 tcatttcttt gcggatgagt tgcagcaggg tttgggtaat cggcatgtcg atttggtact
    14341 tacaggcagt attgaagact tcttctatcg tgctgacccc ttcggaaacg tgtccgattt
    14401 cgaccagcac ctgatgcagt tccttgcctt ctgccaaacc caagccgacg cggcggttgc
    14461 gtgagagtgc gccggtgcag gtcaagatga ggtcgccgat gcctgccagc cccatcatgg
    14521 ttttgggctg tgcgcccatt gcggaggcaa ggcgggtgat ttcagctaat ccgcgcgtaa
    14581 ccagtgcggc acgggcgtta agcccgtact ctaggccatc ggacaatccg gtggcaatcg
    14641 ccataacatt ttttaccgcg ccgccaaccg ccacgccgat aacatcggta ctgccgtaaa
    14701 gcctcatgac ggtcgtgttg agctgcggta cgagttcttc aatccactct tggttttcgg
    14761 aggcgaggac gacggcgcag ggcagttgtt tggcgagttc ctgtgcaaaa ctcggaccgg
    14821 aaagtacgcc gattttttta ttgtcgggca atacttcttt caatacttga aaggtcagca
    14881 gccctgtatc ctgctcgaat cctttgcagg cggcgaggac ggggaggtgt cccgcgccgt
    14941 actgtttgag cagctctgcg ctgcttctca atccggcaac ggaggttacg ataaggacaa
    15001 gtccgctgtc tttgagcgcg tctgccaaat ccgcacacac ttccaaggtt tcgggaaagg
    15061 aaaagccggg cagtccgcgt ttgttttcac gcgcttcctg catttggcgg acttggtctg
    15121 cgttgcgcgt ccacagggat acgcggttgc cgtgttggga aaagtgcagg gcgagcgccg
    15181 taccccacga acctgcgccg ataacggtaa ttttcattgg tcgtctttca acatatcact
    15241 gccgttcact ttaaaacaat cggtgtttct ctgcaagtgc ggtcagggaa atgccgtctg
    15301 aaaggtgttc agacggcatt ttgccccgat gcggcacaat cagcctgtat tgcgcaaacc
    15361 ttgcgccacg ccgttgatgg tcaggtgaac catcagcagc gcgtgcggat tgtcgggttc
    15421 tttacgcagg cgtttgagca tggcgacctg caggccgttg agcgcgttca aatatggaat
    15481 cctcaaggca agcgaacggg cgaggctgcg gttgtcgcgt aaaagttctt cggtttgcag
    15541 caggtcgagc agggctttgc ggctgcgttg gtattcttcc ttaatcatgc cgaagatgac
    15601 ggcggctttt tccggcgatt cgctcaagcc ggcatagttt tccgcgaggg tgatgtcggt
    15661 tttcgccatc acttgctcca tattggaaag catggcttgg aagaacgggt tgctttgggc
    15721 gtgttcgcgc agggcggcga gcgtttcggg tttgtcttcg cacaaggttt ccaccgcgct
    15781 gccgaaaccg taccaagcag gcagcatgag gcggttttgc atccatgaga atacccacgg
    15841 aatagcgcgc aagtcctgaa tccgcgccaa ggttttgcgg ctggcaggac ggctgccgag
    15901 gttgagggtg gcgatttcct gaatcgggct ggtttgcagg aagtagtcga tgaagtcggg
    15961 gtgggtaatc agttcgcggt agtatttgaa cgatacgtcc gacaatgcct gcatcagttt
    16021 ggcatcaggg tcttttttat ccggcaggat gctggcttcc aaagtcgcgg caaccaaggt
    16081 ttccaagttg cgttgggcat tgccggggtc ggcgtatttg gcggtaatga cttcgccttg
    16141 ttcggtaatg cggatttgtc ccgccacgct gcccgccggt tgggcgagaa tggcttggta
    16201 agaagggccg ccgccgcgtc cgacgctgcc gccgcgaccg tggaacaggc gcatgcggac
    16261 atcgtatttt ttgaagagtt cgaccaagcc caattccgcc tgatacagac accatgagct
    16321 ggtaacgtag ccgccgtctt tgttggagtc ggagtagccg agcatgattt cttggatgtt
    16381 tccacggctt tcgagcaggg catcgtacca gtcgaggcgg aacatggttt ccataaccgg
    16441 acaggcgttt tcgagcgctt cgatggtttc aaacagcggc acgatattga tgcggctgcg
    16501 cggtttgccg ttttccaccg ccaacaggcc gctttctttc agcagcaatg ccaaggcgag
    16561 caggtcgctg ggttgttcgc agttggaaat aatgctttgt gtaacggcat cttcgccgaa
    16621 ttcgtctttg attttgcgcg cttcgttgaa aattgccagt tcgtggcggg tatggtcgct
    16681 gtatgtgatg aacgggctgt acagcgggcg ttgatggctc aattcgcgca acaggacggc
    16741 ttgtttttgc tcttcgttca ggctgttgta gtcttccaag cctgcgtgtt ggaaaagctc
    16801 ggtaaccaca tcggcgtgtt tgcctgcgtg ttggcgcagg tcgagcggca tcatgtggaa
    16861 gccgaacacg gacacggaac ggatgaggtc tgccaaacgg ccttcggcaa gcaggcggct
    16921 gccgttgtcg ataagggaac gttgcaattt tttcaaatca tcgagaaatt cttgtgccga
    16981 agcataaggc tcgagaaagc cgaatttgca gcccatgccc aaaccgagcg cgcgcgcttt
    17041 gcccatagcg cgcgccataa tgtaggcaat ggcgcggcgg tagggttctt ccgtgcgggc
    17101 aagttcttcg tcaggcgaga gggctgccag tgccattacg tcgtcgttga ctttgacgcg
    17161 gcggatggag agcggcaatt cgcggtagag tttgtcgagt tcgccacggt aaaaacggaa
    17221 cacggcatcg gcgtggcggc ggaaggcaaa gcgcagggtt tcggcagaaa cgaacggatt
    17281 gccgtcgcgg tcgccaccga tccagccgcc gattttgagg atgttcggaa cgcggacatc
    17341 gggataggcc gtctgaaagt cgtgttccat cttgcggtag agtttgggca gggcttcaaa
    17401 aaagctcatc gggaagatgg acacgccgtt gttgatttcg tcgttgacgc tgagtttgtg
    17461 gcggcgcgtt tcgctggtct gccacaaacc cagcaggata gtgtcgattt cgcggcgcag
    17521 ccgtgccagc gcgtcggcat tggtgcagcg ttcgcgttgc ggcagcagcg cgcggatgcg
    17581 gcggttgaaa ttcaaaacgg tttggcgttg cacttcggtc gggtgcgcgg tcaaaacggc
    17641 ggtaacggac gtattgtcca actgccgctg caccgatttg ccgtcggctt tccccgcttt
    17701 gagcctgcgg acggtttccg tcaggctgcc ttccgcgccg ccgcgtccgg cttcttcgtg
    17761 gatttggcgg cggcgttcgt ggtgcacgtc ttcggcgata ttcaaaatct gggcgaacag
    17821 gccgcaggcc aaggttaaat cgtgggtttg ttgttcgtcc aattgcggca atactttttc
    17881 aatcaatgcc gcgctgtcgt cggaagtgga caagagtttg accgtttcga caaccaatgg
    17941 cgaggcttct tcgtgcagga ggttgaacag ggattgtttc agaaattccg cgtccgccgc
    18001 caaagccgcg tcctttggat tgttcagaat atgcagttgc atgatttttc tctcattgcc
    18061 gtaaatactg taaatgtacc tcaaatgccg catccgtgcc aaaccgttca cactttaacc
    18121 gcccgtgtcc cgaaatgccg tctgaagttg aacgccgccc gacggcagcg ttacaatcgc
    18181 ccgcaactgt tttttccgaa catcatcatg accacgaccg aacacgacaa cgacgatgca
    18241 ttcctgctgc ggtacagccg gcacatcctc ttggacgaaa tcggcatcga agggcagcag
    18301 aaactttccg acgcgcatat tttggtcgtc ggatgcggcg gtttgggtgc cgccgcactg
    18361 ccctaccttg ccgcttcggg tgtcggcacg ctgaccatag ccgatttcga cacggtcgaa
    18421 ctgcacaacc tgcaacgtca ggttgcattt gacgagggcg acgttggcaa actcaaaacc
    18481 gaagccttgg cagaccgtct gcaccatatc aaccataccg tcgatgtccg caccgtcaac
    18541 gaaaaactcg acagcggccg cctgaccggt ttggttcaaa ccgccgatat cgttttagac
    18601 tgctgcgaca actatgccac gcgccaagcc gtcaaccgtg cctgcgtaca aacgaaaaca
    18661 ccgctggttt caggagcagc ggtgcgcttt gaagggcaac ttgccgtgta ccgacccgac
    18721 ttgcccgact cgccatgtta cgcctgcctg ttcgacggcg gatcggcttc agacggcatc
    18781 tgttcccttt tcggcgtatt ctcaccgctg gtcggcatca tcggctgcac gcaggcagcg
    18841 gaggcactga aaatcctgct ggatgcaggc gaaccgtcgc acggcaggct ggcggtttac
    18901 cgtgctttgg aagggggctg gcgatatttc gacctgccgc gcaaccctga atgcccggtt
    18961 tgtggcgcgg cacgataaac cctgccgccg tttcagacgg cataaaaacg gattcggcgg
    19021 aacggtttta aaaatcggcg gtgttttgac atagtgtcga taagcatact tatcttcaat
    19081 acactcaaca ggataattgt ttgcctaagc aaaaaaataa tcgccttttc cctgacgggc
    19141 gggcgaaatc cacggattgc aaaaacacaa cctgaaaatt tacatttctt tgcaaaaaaa
    19201 aaaaaaaaaa aaaaaaaaaa taaacttacc ttataattac ggatgtctta gcaatatctg
    19261 cttcgcagac tcattgagta agatattttc cccgtaatgt gtttggccgt ctgtcccctt
    19321 tgggttcgga tggctttttt ttttgactgt gtttgaatac ccggttgatt tcgtctgttt
    19381 gcagggggaa agccgcttat ttccgttcgg gtggaaaacg gttccatcgg ataaaaggca
    19441 ttttgtccga ctgattaaag ttacatctta gagccgcatc ggcggaatat tcaaacacag
    19501 cttttttaag gaaatccgga tacggcggcg catcaataat gcggcggaat ctcgtcgcgc
    19561 agggaatacg gctcttgcgc gtcgggattc ctgtcctgca ttttttgata cagcagcctc
    19621 aactgagcct gttgcaaatc cagcgtctgc cgcaattccg ccaccatcgc gttcaggccg
    19681 gcgattacgt cctcctgaag cgcggattgg atttccagct ctgtgatgcg gtgttccaac
    19741 tcttgaaccg cgtccattta cagcaccatc gcggcaatcc agccggcaat cagcagcggg
    19801 atgttgtagt ggatgaaggt cgggataacg gaatcgcgga tgtggtcgtg ctgcccgtcg
    19861 gcgttcagcc ccatcgtcgg acccagcgtg gaatcggacg caggcgaacc ggcatcgccc
    19921 aacgcccccg ccgtgccgac aatggcgacg gtggcaagcg gcgaaaaacc caaaccgaca
    19981 cacaaaggca cataaatcgc ggcaataatc ggcaaagtgg aaaaggacga accgatgccc
    20041 atcgttacca aaagtcccac caccagcatc gccaacgccg ccataccttt gctgttgccg
    20101 aatatcgcca tactgctttc caccagcggc tggatatgcc cggtcgcatt catcacggcg
    20161 gcaaaaccct gcgcggcaat cataatgaag ccgaccatcg ccatcatctt gataccttcg
    20221 ccgaatacgt cgtttgcctt gtcgcggttg atgaccccca acatcataaa tacggcgaaa
    20281 ccgagcatcg cgcccaacac cagcgagtct tcatacatca actggatggc aaaacatacg
    20341 gcaatggcgg cggcggcggc caggctgcgg taggcggacg gctgcggacg gtttgccgca
    20401 tcggcgttgc ccgctgtatc ggcattgttg ctttggtaca ggcgcggttt gcggtaatgg
    20461 acaaacgcca gcaggagtcc ggtcagcatt cccaacgcgg gaatcgccat tgccgccatt
    20521 acgttgatgt ttttcacatc aagctgcggc gcggcggaat ggatgttgcc caacaggatt
    20581 tcgttcaaaa aaatcgcgcc gaagccgtaa ggcaggaaca tataggtcgt aaccagcccg
    20641 aaagtaatga cgcacgcaat cagacggcgg tcgattttca ggcggttgaa caccaaaagc
    20701 agcggcggaa caatcatcgg gataaaggcg atgtggatag gtatgatgtt ctgactcata
    20761 atgcccatca caaggatgat ggaaagcagc agccatttga ccgcgccctc gcccgaacgc
    20821 acgctgtcgg gcataccgcc ccggttcagc ttgcggacga ccgcgccggc aagctgctgc
    20881 ggcaggccgg aatgggtaat cgccattgca aacgcgccga gcatcgcata agaaagcgca
    20941 atcttcgcac cgccttccaa acctttgttg aacacgggga taatccccgc ctgactgacc
    21001 tgtcccgccg catcggcaat gttttgcagc ggcatacccg ccaccgcgcc gccgacaaac
    21061 gcgccgaccg tcaggctcaa taccacgtgc acgcgcgaca gcgacagcac cagcataacg
    21121 attacggcaa ctacgactgc attcattgtt tatcgctcca aacctataaa tgtttacata
    21181 tcgaaacaca tcataaccca ataatggaaa acccgccaat tttgcaaaca attatttcaa
    21241 atgcttcata tacttcccca gcgtaaccct gtccaaaccc gccaagtccg gcagggtttc
    21301 cactcccgaa aaaccattct ccgccaacac gccgcgcacc gccgcgccct gatcgaaacc
    21361 gtgttccagc aataaaaaac cgccttccgc caaacggtcg ggcgcgcctt gcgccaaggt
    21421 gcggatgcag cttaggccgt ctgaaaagtc ggtcagcgcg atttgcggct caaaccgcaa
    21481 atcgccttgc aacaaatgtt tatcgccgtt ttcgatatag ggcgggttgg acacgatgat
    21541 gtcccatttc ccttcagacg gcatatcggt gtcgaaccac gaaccgtgtg caaattcgac
    21601 ccgcgcgccc aaatctgccg catttttccg cgccgtttca agggcgggcg tgctgatgtc
    21661 ggatgcgcgc acaaacgcat cggggcgttc gagtgcgacg gttacggcaa ccgcgccgct
    21721 gcccgtcccc aaatcccaca cgcgcccgtt ttcgggcagg cgcgccaata cggcttcgac
    21781 caagtgttcg gtttcggggc gcggaatcag cacgctcgga ttgactgtaa agcgtctgcc
    21841 ataaaattcg cgcacaccta aaatataggc aaccggctcg ccgttcagac ggcgttgcgc
    21901 cagcctgtcc gcccgctgtc ggacttcgtc cggcatttct tccccgcccc gcgtcaacaa
    21961 ctgcacgcgc gtatattccg aaacatattg cagcagcatt cttgcttcaa ttttaggcag
    22021 ttttgacaag cccaaccatt cgtcaaacgt cattttttat cccgtctgcc gccgatgcgg
    22081 cttttctttc cttattcttt ccggcaaacg taccgatggt ggcaaccgca aatgcggcat
    22141 accacaaata aaatcctgca ccgtagcgca caatatccga tgtattccct gcttcatcga
    22201 cgtatacggc tttcacactg aaagccacca acgccaagcc ccaaagtgcc gcatggacag
    22261 gcacgacctt cttccgcaac gccagcaaaa caatggccgc caaccaaaca taattcgcat
    22321 agaccgcaca atacctgata tccaaagaag caaatatcga ccccaaaatc aaaacggtca
    22381 aaccctccat gcttccatga ttgcccaaat aaaatgcaac attggataaa gacgctatcc
    22441 acagggcaac cgacaccagc aacatcacta tgggaaaact tgatttccga ttctgttcct
    22501 gcatggtttt atcctaatgt aaaaggccgc ctgaaaacct ttcagacggc atcgtgccgg
    22561 attccgcgtc agattgcgct gccgccgacg gtcagtccgg catcaatccg caaagtcggt
    22621 tgccccacgc cgacggggac gctctgccct tctttgccgc acacgccgac accgctgtcg
    22681 agcgcggtat cgttgcctat catcgaaacg tgtttcagca cttcgggacc gttgccgata
    22741 atggtcgcgc ctttgacggg atattgcagc ctgccgcctt ccacccacca tgcttcggac
    22801 gcgctgaaca caaatttgcc gctggtaatg tccacctgtc cgccgccgaa gttgacggcg
    22861 taaatgcctt tgtcgatgga cgcgatgatt tcttccggct catagctgcc gttttccata
    22921 aaggtattgg tcatgcgcgg cataggggcg gaggcgtagc tttcgcggcg gccgttgccg
    22981 gtcgattgcg tacccgtcag gcgggcgttg gtttcgtcct gcatatagcc ggtcaaaata
    23041 ccgtcttcaa tcaatacggt gcggcgggtt tcgttgcctt cgtcgtcgat gttgagcgaa
    23101 ccgcgccggc cggcaatatc gccctgatcg acgacggtaa cgcctttggc ggcgacgcgc
    23161 tcgcctattc tgccggaaaa gacgctggtc cccttgcggt tgaaatcgcc ttccaaaccg
    23221 tgtccgaccg cttcgtgcag caacacgccc ggccagccgt tgcccaaaac gacggtcatt
    23281 tcgccggcgg gcgcggggcg ggattcgagg ttggtgagtg cctgtttgac ggcggcatcg
    23341 acaaaccgat gaaccaagtt ttcatcgaaa taagccaagt cgtagcgtcc gccgccgccc
    23401 gcgctgccct gttcgcggcg ttcgccctgt ttggcgataa cggtaacgtt caggcgcacc
    23461 atcgggcgga tgtcggcggc gtgtttgccg tccagacggg cgaggtaaac catatcgtat
    23521 tcgcaggtca aaccggccat cacttgcacg atgcgcggat cggcggcttt ggcgattgct
    23581 tccactttgt tcaacagcgc gactttggcg gcggaatcga ggccggcaat ggggtcggac
    23641 gcggaacaaa ccggcttgcc gcgcgtttca gacggcattt tggcggacac cttgccgcct
    23701 gccgccccaa tcgcgcggac ggcgcgggcg gaacggttta tcgaatcgat gcacaggctg
    23761 tcggcgtagg caaaggcggt tttgtcgccc gaaacggcgc gcacgcccac gccctgattg
    23821 atttggaagc tgcccgattt gacgatgccc tcttccaaat gccagctttc ataagcggtg
    23881 cgctggcagt agatgtcggc gtaatcgacg tggtgcgcgc cgatgatgca caggcttttg
    23941 gcgagcagtt cgggggaaag gcggttggct tcgagcagcc gcgcctgtac ggcggaatag
    24001 gtcggatgca tagtgtcggc gcataaaaaa tcaggggctt gattatacgg catttgttat
    24061 ggaaatgcgc cgtgccgcct gaaatgtaag atttttgcca acgccccctg cttttgtgta
    24121 cacttaaagc tccttgtcgg agtgccgccg ccgggcggct gagattgcga aagcagaatc
    24181 cgtagaacct gtcggggtaa tgcctgcgta ggaaacaaaa cctccccgcc ctttcgggct
    24241 tccgttccct tttccgcact tccccgcccc attttcatgt tttttaagga cttgatatgt
    24301 cgggcaatgc ctcctctcct tcatcttcct ccgccatcgg gctgatttgg ttcggcgcgg
    24361 cggtatcgat tgccgaaatc agcacgggta cgctgcttgc gcctttgggc tggcaacgcg
    24421 gtctggcggc tctacttttg ggtcatgccg tcggcggcgc gctgtttttt gcggcggcgt
    24481 atatcggcgc actgaccgga cgcagctcga tggaaagcgt gcgcctgtcg ttcggcaaac
    24541 gcggttcagt gctgttttcc gtggcgaata tgctgcaact ggccggctgg acggcggtga
    24601 tgatttacgc cggcgcaacg gtcagctccg ctttgggcaa agtgttgtgg gacggcgaat
    24661 cttttgtctg gtgggcattg gcaaacggcg cgctgattgt gctgtggctg gttttcggcg
    24721 cacgcaaaac aggcgggctg aaaaccgttt cgatgctgct gatgctgttg gcggttctgt
    24781 ggctgagtgc cgaagtcttt tccacggcag gcagcaccgc cgcacaggtt tcagacggca
    24841 tgagtttcgg aacggcagtc gaattgtccg ccgtcatgcc gctttcctgg ctgccgctgg
    24901 ccgccgacta cacacgccaa gcacgccgcc cgtttgcggc aaccctgacg gcaacgctcg
    24961 cctatacgct gacgggctgc tggatgtatg ccttgggttt ggcagcggcg ttgttcaccg
    25021 gagaaaccga cgtggcaaaa atcctgctgg gcgcaggttt gggtgcggca ggcattttgg
    25081 cggtcgtcct gtcgaccgtt accaccactt ttctcgatgc ctattccgcc ggcgcgagtg
    25141 cgaacaacat ttccgcgcgt tttgcggaaa cacccgtcgc tgtcggcgtt accctgatcg
    25201 gcacggtgct tgccgtcatg ctgcccgtta ccgaatatga aaacttcctg ctgcttatcg
    25261 gctcggtatt tgcgccgatg gcggcggttt tgattgccga ctttttcgtc ttgaaacggc
    25321 gtgaggagat tgaaggcttt gactttgccg gactggttct gtggctggcg ggcttcatcc
    25381 tctaccgctt cctgctctcg tccggctggg aaagcagcat cggtctgacc gcccccgtaa
    25441 tgtctgccgt tgccattgcc accgtatcgg tacgcctttt ctttaaaaaa acccaatctt
    25501 tacaaaggaa cccgtcatga cccgtatcgc catcctcggc ggcggcctct cgggaaggct
    25561 gaccgcactg cagcttgcag aacaaggtta tcagattgca cttttcgata aaggctgccg
    25621 ccggggcgaa cacgccgccg cctatgttgc cgccgccatg ctcgcgcctg cggcggaagc
    25681 ggtcgaagcc acgcccgaag tggtcaggct gggcaggcag agcatcccgc tttggcgcgg
    25741 catccgatgc cgtctgaaca cgcacacgat gatgcaggaa aacggcagcc tgattgtgtg
    25801 gcacgggcag gacaagccat tatccagcga gttcgtccgc catctcaaac gcggcggcgt
    25861 agcggatgac gaaatcgtcc gttggcgcgc cgacgacatc gccgaacgcg aaccgcaact
    25921 cggcggacgt ttttcagacg gcatctacct gccgaccgaa ggccagctcg acgggcggca
    25981 aatattgtct gcacttgccg acgctttgga cgaactgaac gtcccttgcc attgggaaca
    26041 cgaatgtgcc cccgaagacc tgcaagccca atacgactgg ctgatcgact gccgcggcta
    26101 cggcgcaaaa accgcttgga accaagcccc cgagcacacc agcaccctgc gcggcatacg
    26161 cggcgaagtg gcgcgggttt atacgcccga aatcacgctc aaccgccccg tgcgtctgct
    26221 gcatccgcgc tatccgctct acatcgctcc gaaagaaaac cacattttcg tcgtcggcgc
    26281 gacccaaatc gaaagcgaaa gccaagcccc cgccagcgta cgttccgggc tggaactctt
    26341 atccgcgctt tatgccgtcc atcctgcctt cggcgaagcc gacatcctcg aaatcgccac
    26401 cggcctgcgc cccacgctca accaccacaa ccccgaaatc cgctacagcc gcaaacgccg
    26461 cctcatcgaa atcaacggcc ttttccgcca cggtttcatg atctcccccg ccgtaaccgc
    26521 cgccgccgtc agattggcag tggcactgtt tgacggaaaa gacgcgcccg aacgtgatga
    26581 agaaagcggt ttggcgtata tccgaagaca agattaaagc cgtctgaaag gaaccccatg
    26641 accttcccgc cactcaaatc cccgctcaaa ttctacgccg tcgtccccac cgccgattgg
    26701 gtggggcgca tggtcaaagc aggtgccgac acggtgcaac tgcgctgcaa ggccctgcac
    26761 ggcgatgaat tgaaacgcga aatcgccctc tgtgtcgccg cctgtcaggg cagccatacg
    26821 cagcttttca tcaatgacca ctggcgcgag gcaatcgaag caggcgcgta cggcgtgcat
    26881 ctcggacaag aagacatgga caccgccgac ctcgccgcca ttgccgctgc cggtttgcgc
    26941 ttgggtttga gtacgcactc cgtcgccgaa ctcgaccgcg ccctgtccgt gcaccccagc
    27001 tacgtcgcca gcggcgcgat tttcccgacc acgaccaaac aaatgcccac cgccccgcaa
    27061 ggcttggaca agctgcgcga atacgtcaaa caggctcgcg gcacgcccgt cgtcgccatc
    27121 ggcggcatcg atttgaacaa cgcccaagcc gtgctggcaa caggcgtatc ctcactcgcc
    27181 gtcgtccgtg ccgtgaccga agcggcaaat cccgaagccg tggttaaagc gtttcaggct
    27241 ttgtgggatg gataaaaccg aaagaagaaa attcaattgc cgtgtaggca aaacttagcc
    27301 cgttatcgca aacatactta actttaaatg tggcatatca tcaaattccg tcatttccgc
    27361 gcaagcggga atccgcctta aaacttgaga aaccatcatt tgaaaaacag tttccgaatt
    27421 tcaaaaatgg attcccgcct gcgcgggaat gacggcaacc ggccggttgc gtatcaaaaa
    27481 ataaagtaat tcggctag
//
LOCUS       DAWEYF010000006        25226 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.006, whole genome shotgun sequence.
ACCESSION   DAWEYF010000006 DAWEYF010000000
VERSION     DAWEYF010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25226
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.006"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            1..537
                     /locus_tag="WGN93_000200"
                     /pseudo
     CDS             1..537
                     /locus_tag="WGN93_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            594..1667
                     /locus_tag="WGN93_000201"
     CDS             594..1667
                     /locus_tag="WGN93_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ0226173.1"
                     /translation="MRPFFVGAAVLAILGALVFFINPGAIVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCAR
                     LIWLDRNTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILL
                     GAEALKECRLKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTALAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGIMGGV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVPILFAAAVSRAVLMNVNPIFFITVPAILTAA
                     VFVLYLLTFVPIFRANAFTDDPE"
     gene            complement(1714..3903)
                     /locus_tag="WGN93_000202"
     CDS             complement(1714..3903)
                     /locus_tag="WGN93_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ0226174.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILGVQTTFSDEPLLPESWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SQMAAGKRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYVVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADALEFLNAAKETLAPLLPASVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            4042..4824
                     /locus_tag="WGN93_000203"
     CDS             4042..4824
                     /locus_tag="WGN93_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ0226175.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            complement(5142..7076)
                     /locus_tag="WGN93_000204"
     CDS             complement(5142..7076)
                     /locus_tag="WGN93_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ0226176.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGMGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIRRLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASKVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIRTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(7142..8320)
                     /locus_tag="WGN93_000205"
     CDS             complement(7142..8320)
                     /locus_tag="WGN93_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ0226177.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNSDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            8546..8935
                     /locus_tag="WGN93_000206"
     CDS             8546..8935
                     /locus_tag="WGN93_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ0226178.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFDNYNQAKLKQNKYFNITLSEVSPDHFTLQAAPDPMTND
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            9219..10265
                     /gene="adhP"
                     /locus_tag="WGN93_000207"
     CDS             9219..10265
                     /gene="adhP"
                     /locus_tag="WGN93_000207"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ0226179.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATYCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(10430..13915)
                     /gene="smc"
                     /locus_tag="WGN93_000208"
     CDS             complement(10430..13915)
                     /gene="smc"
                     /locus_tag="WGN93_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ0226180.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHTGQTIAGHEEHKGRLKQENQALNLPDEAETAAAQEAAALLQNR
                     QEHYEEQIIAAEEALHAAREAFQTASSRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDHAAAPQLWQHITAPAEWQHALSVILAERLHARAVPQGFVPPEPLPQGQAAWL
                     SDDLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQSDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELDNLAPELSADEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIARLEQQTLDWQERQQELALAYETEFQNDEQHIKLEELS
                     EAVQSLDEEYIVVQEKLAQIQEQGREQYARVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            complement(13994..14140)
                     /locus_tag="WGN93_000209"
     CDS             complement(13994..14140)
                     /locus_tag="WGN93_000209"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226181.1"
                     /translation="MSWRIITRPAAGQYGKCRAKHRALAEPGFGALKMPSEGFRRHRG
                     CGMR"
     gene            14164..14886
                     /gene="lpxH"
                     /locus_tag="WGN93_000210"
     CDS             14164..14886
                     /gene="lpxH"
                     /locus_tag="WGN93_000210"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ0226182.1"
                     /translation="MKPAYFISDLHLSEKQPELTALLLRFLRSSAARQARAVYILGDL
                     FDFWVGDDEVSELNTSIAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDKAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFGAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKY"
     gene            15155..16741
                     /locus_tag="WGN93_000211"
     CDS             15155..16741
                     /locus_tag="WGN93_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ0226183.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     DDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(16909..17112)
                     /locus_tag="WGN93_000212"
     CDS             complement(16909..17112)
                     /locus_tag="WGN93_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ0226184.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            17228..17725
                     /locus_tag="WGN93_000213"
     CDS             17228..17725
                     /locus_tag="WGN93_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ0226185.1"
                     /translation="MTALTLPEDIRQQEPSALLYPLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            17807..19000
                     /locus_tag="WGN93_000214"
     CDS             17807..19000
                     /locus_tag="WGN93_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ0226186.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQNFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(19404..20339)
                     /gene="hemC"
                     /locus_tag="WGN93_000215"
     CDS             complement(19404..20339)
                     /gene="hemC"
                     /locus_tag="WGN93_000215"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ0226187.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            20458..20973
                     /gene="ybeY"
                     /locus_tag="WGN93_000216"
     CDS             20458..20973
                     /gene="ybeY"
                     /locus_tag="WGN93_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ0226188.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KSGYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            20975..21799
                     /locus_tag="WGN93_000217"
     CDS             20975..21799
                     /locus_tag="WGN93_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ0226189.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATRVK"
     gene            complement(21942..23321)
                     /gene="nhaC"
                     /locus_tag="WGN93_000218"
     CDS             complement(21942..23321)
                     /gene="nhaC"
                     /locus_tag="WGN93_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ0226190.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHCYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(23612..24835)
                     /locus_tag="WGN93_000219"
     CDS             complement(23612..24835)
                     /locus_tag="WGN93_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ0226191.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         5777 a         7198 c         6532 g         5719 t
ORIGIN      
        1 gcggatatgc ggactgccga gaaaaaccgt ctgcattagg ttcatgaaac gcaagtcgga
       61 agcgtcaaac aactgattgc ccattttgac cggctgattg acgaattgga caaacaaatc
      121 gacgaccaca cccacacgca ttttgacggc aaagcccaag tggcggagca aatcaaaggc
      181 atcggttcga taacgacggc tacgctgatg gcgatgctgc ccgaattggg gcggctgtcg
      241 cacaaacgga tagcgagttt ggccggcatt gccccgcacc cgagggagag cggggaaacc
      301 aaattcaaaa gccgctgctt tggcggaaag tctgcggtac gtaaggcgct gtatatggct
      361 accgtggcag cgacacgttt tgaaccgctt attcgggatt tctaccaacg cctgccgtcc
      421 gagggtaagc cgtataaggt tgccgttacg gcatgtatgc gcaaactgct gacgatatcg
      481 aatgcccgga tgcgtgatta ttttgccgaa aacgataccg ccgaaaacgg tatctaaacg
      541 gcttgatttg agttttggta tttttgcccg acggggtgaa aaatacagtt gctatgcggc
      601 cgtttttcgt cggcgcggcg gtgcttgcca tactcggtgc gctggtgttt ttcatcaacc
      661 ccggtgccat cgtcctgcac cgccaaattt tcttggaact tatgctgccg gcggcatacg
      721 gcggtttttt gactgcggct ttgttggact ggacgggttt ttcgggtaac ctgaaacctg
      781 tcgcgacttt gatggcggca ttattgctcg ccgcatccgc tatactgccc ttttcgccgc
      841 aaactgcctc gtttttcgtc gccgcctatt ggctggtgtt gctgctgttc tgcgcccggc
      901 tgatttggct agaccgaaac accgacaact tcgccctgct aatgttactt gccgcgttca
      961 ctgtttttca gacggcatat gccgtcagcg gcgatttgaa cctgttgcgc gcgcaagtgc
     1021 atctaaatat ggcggcggtg atgttcgtat ccgtgcgcgt cagtattctt ttgggcgcgg
     1081 aagccctgaa agaatgccgt ctgaaagacc cagtattcat ccccaatgtc gtctataaaa
     1141 acatcgccat tactttcctg ctcttgcacg ccgccgccga actttggctg cccgcgcaaa
     1201 ccgccggttt taccgcgctc gccgtcggct tcatcctgct cgccaagctg cgtgagcttc
     1261 accatcacga actcttacgt aaacactacg tccgcactta ttacctgctc caactctttg
     1321 ccgccgcagg ctatttgtgg acaggcgcgg cgaaattaca aaacctgccc gcctccgcgc
     1381 ccctgcacct gattaccctc ggcggcataa tgggcggcgt gatgatggta tggctgactg
     1441 ccggactgtg gcacagcggt tttaccaaac tcgactaccc caaactctgc cgcatcgccg
     1501 tccccatcct cttcgccgcc gccgtctcgc gcgctgtttt aatgaacgtg aacccgatat
     1561 tcttcatcac cgtccccgcg attctgaccg ccgccgtgtt cgtgctttac ctgctgacat
     1621 tcgtaccgat ctttcgggcg aacgcgttta cagacgatcc ggaataaaaa tgccgtctga
     1681 aacggttttc agacggcatc gtattgccga taatcaagcc tcctgcggat cgacatccac
     1741 cgaccatcta attttgccgt cgcggttttg ctgcaacacc tgcacccaca aactcacggc
     1801 acggtgcaaa tcctgtcggg acggggattc gaggaaaatt tgcgcgcgtt cgcgttcggc
     1861 gaggcgcacc atcagcatgg gggcggcgcc aaactgggaa acgcttgcgg gcaacagcgg
     1921 ggcgagggtt tctttggcgg cattgagaaa ttccagcgca tcggcaacac gcggcgcgtc
     1981 cgcgcggacg gcggtctgaa aaccgaaggg cggcatggcg aacatttgcc gttcgttcaa
     2041 ttcgttttcg gcaaacacga cgtagtcctg cgctttgacg gcggcgaaga cgggatgttc
     2101 gggcagttgg gtctgtatca gcaccttgcc gggcttgtcg gcgcgccccg ccctgccgga
     2161 cacctgcatc agctcggcaa acagcctttc cggcgcgcgg aaatccgcgc tgtacaggct
     2221 gccgtcggcg ttcaatacga taacgaggtt gagccgcgcg aaatcatgac ctttggcgag
     2281 catctgcgtg ccgaccagaa tatcgatttc gttgtcggcg atgcggcggt acaaatccgc
     2341 ccagtcgttt ttgtgcgccg tactgtccct atcgacgcgg acgacggctg ccttgggcag
     2401 gaaggcgcgc agggtttctt cgacgcgctg cgtgccgtgg ccgacggcgg tcaggtcttg
     2461 gttgccgcag tcggggcatt tgtacgggat gggttcgcgg tggtcgcagt ggtggcagcg
     2521 cagttggcgg gcgcgttggt gcagcaccat tttggcggag cagttcgggc agccgaaggt
     2581 atgaccgcag tcgccgcaaa acagcgcggg cgcgaagccg cgccggttaa ggtacaccag
     2641 cgacataccg cctgcttcaa agttctgttt caaaagctgc aaggcttgcg gcgagaagcc
     2701 gttgtcgagt ttcagacggc ctacgttgag aatgtccact tgcggcagtt gcgcggcggt
     2761 atgggcgcgt tcggtcagtt gcagcaggcg gtacgcgcca ctttgcgcct tgtgccagct
     2821 ctccaagctg ggcgtggcac tgcccaacac gacggggcag ccgccctgct tcgcccgcca
     2881 caccgccaaa tcgcgggcat gatagcgcaa ttcgttgtct tgtttgaacg agccgtcgtg
     2941 ttcctcatcg accacaatca gcccgacatc atccatcggc gtgaacactg ccagccgcgt
     3001 gccgatcacc agcttcgcct gccctaacat cgcgcgcaga taatcctgcg tgcgcttgcc
     3061 tgccgccatc tgactgtgca acacggcggt cggcacgtcg gcaaaacggt tttccacccg
     3121 cttcaaaagc tgcggcgtga ggttgatttc gggcaacaga aacaacacct gccgcccctg
     3181 agccaacact ttcgccatcg catcaaaata cacctcggtc ttgccgctgc cggtgatgcc
     3241 gtacagcaga aacggctgga agcgtcccaa tgccgtctga atggcatcgg aagccttctg
     3301 ctggtcagca tttaatacaa attcagagtg cgaagcctgc ccattacacg accttaaaac
     3361 gggcttcgcc gcttccgtcg tttcaatcca accctgctcc gcccaatctt cgattaattt
     3421 cgccgcctgc gcgtttacct gcttcaacgc tgccatcgtc atttcgcccg acagcagcgc
     3481 gtcccacaaa gccgcttttt tgttgaaccg cgccggcggc ggcgtttgcg ccctgcccgc
     3541 ttcgttcaac gcgtaaaaca agggcggctg cggcatttcc accgcgcgcg tttccttcaa
     3601 accttgcggc aatgcggcaa atactgcctg cccggtcgga tagtggtaat aacgcgacgt
     3661 aaacgccaac aaatcacgcc agctttcggg cagcagcggt tcgtccgaaa aggtcgtctg
     3721 aacgcccaaa atccgcgccg tatccatatc cggcgcaata tccgtttccc acaccatccc
     3781 gaccacggtt ttattgcgga aaggcacaag cacccgcgtt cccggaggaa gcggatcgga
     3841 atgggaataa gtcaaaaggc cgtctgaaag cggcacgttt acggcgatgc ggtggtagat
     3901 catacaggca ggcaaatcat ttttttgcgt attttaacag gcggaagcta ttttcagacg
     3961 ataaattgag cctaggcgca atgcaggcgc aacagagatt tgatacaatt ccgcttttcc
     4021 aacacgcgca atcatcttta tatgaaaacc aagttaatca aaatcttgac cccctttacc
     4081 gtcctcccac tgctggcttg cgggcaaacg cccgtttcca atgccaacgc cgaacccgcc
     4141 gtcaaagccg agtccgccgg caaatccgtt gccgcctctt tgaaagcgcg tttggaaaaa
     4201 acctattccg cccaagattt gaaagtgttg agcgtcagcg aaacaccggt caaaggcatt
     4261 tacgaagtcg tcgtcagcgg caggcagatt atctacaccg atgccgaagg cggctatatg
     4321 ttcgtcggcg aactcatcaa catcgacacg cgcaaaaacc tgaccgaaga acgcgccgcc
     4381 gatttgaaca aaatcgactt cgcctccctg cctttggaca aagccatcaa agaagtgcgc
     4441 ggcaacggca agctgaaagt cgccgtcttc tccgaccccg attgtccgtt ctgcaaacgc
     4501 ttggaacacg agtttgaaaa aatgaccgac gtgacggttt acagctttat gatgcccatt
     4561 gccggcctgc accccgatgc cgcgcgcaag gcgcaaatct tatggtgtca gcccgaccgc
     4621 gccaaagcgt ggacggattg gatgcgtaaa ggcaaattcc cggtcggcgg cagcatctgc
     4681 gacaatcccg tcgcggaaac cacttccttg ggcgaacaat tcggcttcaa cggcacgccg
     4741 accctcgtct tccccaacgg gcgcagccaa agcggctaca gcccgatgcc ccaactggag
     4801 gaaatcatcc gcaaaaatca ataatccatc cgcaaaacaa aaggcttgga aaattccaag
     4861 ccttttttgc gggaaatgcc gtctgaaaac caatccgcac tgaaagttat agtggattaa
     4921 atttatagtg gattaaattt aaaccagtac agcaagccaa caaacacatc ctaacccatt
     4981 gaatgattga aaataataaa ctgaacaata cgaaacacac cgccgtcatt cccacgcaag
     5041 tgggaatcta gaacgtagaa tctaagaaac cgttttgtcc gataagtttc tgctccaaaa
     5101 tgaccggtcc tgcagcttca aacggcatct ttgtgccaac ctcaatcctg cgccaatgcg
     5161 tctatcggat tgagtttggc tgctttattg gcaggcataa agccgaacgc gatgccgatt
     5221 ccggtcgaac aggcgaccgc gccgatgacg gacatggcgg aaatgtccat cgggaagtcg
     5281 gttacaaaat gattgaacac gaggctgacg gcggcggaca aacccacgcc gaccaaaccg
     5341 ccgatgacgc agattaacac cgcctcaatc aaaaactgct gcaaaatatt gccgcgccgc
     5401 gcgccgattg ccatccgtat gccgatttct ttggtgcgct cggtaacgga caccagcatg
     5461 atgttcatca cgccgatgcc gccgactacc aatgaaatca gggcgatgga ggaaatcagc
     5521 agcttcatcg taccggtggt gctttcgact atctgcctga tgctgtcgct gttgttcatg
     5581 aagaaatctt ccgtgccgtg ccgcgctttg agcagatcgg tcagcccttt ttcggcaacc
     5641 tgggtattgg cattgtcttt gattttgacg gtgatggagt tggtgtggct ctcgcctgtg
     5701 atttggtgca tcaccgtcgt atagggcgac caaagcatca gcacgtcgga attgccgaaa
     5761 gcgttttcgt cttttttcat cacgccgatg acggtcaagg ggcgtttcct gaacaaaatg
     5821 gttttaccca acggatccga gtccgcaaag agtttgtctt tgacattttg gtcgatgacg
     5881 acgacctgcg cgtcttcttt cacatcgttt tcgtcaaaca gccgccccgt ttccagcttc
     5941 agtccgcgca cgtcgaaata ttgttcgccc acgccgtaca aagaagcggt caggtcggta
     6001 ttgcggtaag tcagcgtgcc gccgctcgaa gtcatgggcg tggcggaagc aacgtagctt
     6061 tgtttggcga tgatttttgc gtcgtctatg gtcagggttc tgattttgcc gctgcgcctg
     6121 tcgccgaagc cgcgcccggg gaagatgctg atggtgttcg tccccatcga actgatgtct
     6181 tcgaggattt ttttctgcga accgttgccc aatgcaacga cggagacaac cgaagcgata
     6241 ccgatgatga tgcccagcat cgtcagaagc gaacgcattt tgtgcgccaa tactgcttgc
     6301 accgacattc tgaaggcttc gacaaactgg tcgtaataaa acgaccacga ggctttttcc
     6361 cgaatcctcc cgaccttgct tgcggggatt tcgggatttt tcgaggtgtc ggaaatgatt
     6421 tcgccgtccc ggatttcgat gacgcggttg gcgttggcgg caatgccggg gtcgtgtgtg
     6481 accataatga cggtatgccc cgcttcgtgc agcctgcgga tgatttccat cacgtttttg
     6541 ccgctggcgg tatcgagcgc gccggtcggc tcgtcggcga agatgatttc gccgccgttc
     6601 atcagggcac gggcgatgga gacgcgctgc tgctgtccgc ccgagagttc gccgggcttg
     6661 ttgccctctt tacttgccaa acccaaatcc tgcaacaact tctccgcccg cgcggaacgc
     6721 tctttgccgc ccatacccat atacacggcc ggcagcgcaa cgttgtccct tgcggtcagc
     6781 gagcttaaga ggttgtagcg ttggaagatg aaaccgaagc gttcgcggcg caatgccgcc
     6841 agttcgtcag gctgcatttt ggcagtttcg atgccgtcga ttcggtacga accggaaccg
     6901 gcggtatcca aacaaccgag tatgttcatc agcgtggact tgcccgaacc ggactgcccg
     6961 atgatggcga caaaatcgcc cttctctatc gacaggctga tgtctttcaa aatatggacg
     7021 cggttctcgc cgctgccgaa atagcggttg atgtttttac attcgatcaa gctcataata
     7081 ttccgtaaat caataacaaa tgccgtctga aaccgtttcc gtgttcagac ggcatattcg
     7141 tttatcggcg cggcgggccg cctagggcgc gttcgccgct ttcctgttgc tcggcggcgg
     7201 ttatttcgga gatgaccact ttgtccccct ctttcaaccc gctttttact tcggtattca
     7261 tactgtctct cataccggtc cggatttcgc gttccgccgc cttgccgtcc gcacccaaca
     7321 cgcgcacaaa cgccttgccg ccgcgatttt tcacggtcag cgacggaata atcagcacat
     7381 ttttcacgcc gtcgatttca accgtattct gcgtcgtcat ccccgtggcg agtttgccgt
     7441 ccgaattcgg cacaaacgaa cgggcataat agtagaccgc attggaagcc gtatccgtac
     7501 tgctgttgta gccgcccgac gacatcgtgg tcagcccggg gtcgacgctg tcgagcttcg
     7561 ccttaatcgg cgtatccggt tcggacaaaa tcgtaaacga aatatcctgc cccgccttca
     7621 ccttggtaat atcgccctcg gcaatctgca ttttgttcaa catcatatcc agattcgcca
     7681 attggacaat cgtcggcgta gactgcgccg cgttcacagt ctgcccctct tccacgagaa
     7741 tcgccaccac cgtgccgtcc atcgttgcgg taatgcgcgt gtagcccaat tccgactcgg
     7801 cggtattgat ggaaattttg ctctgtctga ttaaagcctt cagctcggca acattggctt
     7861 tggcggcggc aaacgcatcc tgcgcgcttt ccaaatcctc tttggaagtc gcgttttcct
     7921 tccataacgc cgcctgacgc ttatatttct tctccgcact gcccaatgca atctgtgccg
     7981 acaccagctt cgcctgatac gtttccaact tggatttttc cgtattgagc gtattggtct
     8041 gcgaggtcga attgatttcc gcaatcaaat cgcccttttt aacctgttgc ccgagtttga
     8101 cataaagttt cttaatctgc cccgatgcct gcgcgccgac cgataccagg ttggacggcg
     8161 aaatctcccc tgttgcagaa accgtccggc tgatgtcgcc gcgcctgacc gtttccgtaa
     8221 tataagcagc ctgcggctcg ggcttcagat aagaccatcc gccccaaacc gctgccgccg
     8281 cgaccgccgc aacagccgcc catttcatca tttttgccat gttttcaatt ctctgtatgc
     8341 gtcaatccca taaatcggaa gcggattcta ccgcaagtcc ctgccccatc caaggcggca
     8401 aactgccgac aataaaaata accatttgtt ttaaatggct tatacaatct gctttcccga
     8461 aaatttcaat ccgtttacat attccgccat ttccgatacg gcgttataat gccgtcgacc
     8521 gacaaacaaa tggaaacaca ttgctatgaa aaacgttcaa aaaggcttta cgctgctcga
     8581 gctgatgatt gccgtcgcca tcctcggcat cctgacgctt atcacctacc cttcctataa
     8641 aacctacatc cggcgcgtcc gcctgtcgga agtcaggacg accctgctgc acaacgcgca
     8701 gaccatggaa cgttactacc gccaaaaagg gacgtttgac aactacaacc aagccaaact
     8761 gaaacaaaac aaatatttca acattacctt aagcgaagtc agccccgacc acttcaccct
     8821 tcaggcagcc cccgatccga tgaccaacga cggcgaaacc tgcgtcgtta cgctcaacga
     8881 cggcggtacc attgccgctt ccggtacaaa ccaatcctgc cccggcttcg actaatcctc
     8941 cgccgaagcc cgcaaacccg taaagatgcc gtccggacac agcttcagac ggtatcttta
     9001 cgggtttgca catccggttt ttcaaacttg aaacctgccg cccctcatcc ggcaaccgcc
     9061 ccgatgccgc gcctttccaa gatgttataa tataacatat aatctatatt tttcaacaac
     9121 ataccacttg acctgtgaga tgcggaagcg tatgcttacc cttatatcgg acaacattcc
     9181 atttacaggt ttttttgccg taactaagga gcgcaatcat gaaaatgcag gcagttgttg
     9241 tgaataaaaa tgtagcgggc gatgtggaaa tagtcgaacg cgaggttcgc ccgttggaat
     9301 acggcgaggc gttggtcgaa gtcgaatatt gcggcgtgtg ccacaccgac ctgcacgttg
     9361 cggcaggcga ctacggcgaa aaaccgggcc gcgtgctggg acacgagggc atcggtttgg
     9421 ttaaagaagt tgccgacggt gtgaaaaatc tgaaagtcgg cgaccgcgtc agcatcgcct
     9481 ggctgttcca aagctgcggc tcgtgcgaat actgcaatac cggccgcgaa accctgtgcc
     9541 gctctgtatt gaacgcgggc tacaccgccg acggcggtat ggcgacctac tgcatcgtga
     9601 gtgccgatta cgcggtcaaa gtccctgaag gtttggatcc tgcgcaagct tccagcatta
     9661 cttgtgccgg cgtgaccact tataaagcca ttaaagtttc cagtgttcgt ccgggacagt
     9721 ggattgccat ctacggcgcg ggcggtttgg gcaacttggg ggtccaatac gcgaaaaaag
     9781 tatttggcgc acacgttgtc gccatcgaca tcaacgacga caaactggcg tttgccaaag
     9841 aaaccggcgc ggatttggtt gtcaacgccg ccaaagaaga cgctgccaaa gtgattcagg
     9901 aaaaaaccgg cggcgcacac gctgcggtcg taaccgccgt atctgctgcc gcattcaact
     9961 ctgccgtgaa ttgcgtccgc gcaggcggac gtgtggttgc catcgggctg ccgccggaat
    10021 cgatggattt gtccatcccg cgtttggttt tggacggcat cgaagtggtc ggctctttgg
    10081 tcggcacgcg caaagatttg gaagaagcct tccaattcgg cgcggaaggt ttggttgtgc
    10141 cgaaagtcca actgcgtgct ttggatgaag cacccgccat tttccaagaa atgcgcgaag
    10201 gcaaaatcac cggccgtatg gtgatcgata tgaaaaaaga atgcggctgc ggccatcacc
    10261 actgatttga cgtggcagta cacatcgaaa tgccgtctga acgctgttca gacggcattt
    10321 tttatggatt tggatttgat tttaatctgt tctgtttgaa ataccgtctg aaaaccctta
    10381 tcgcaacacg tcattaaaaa cggcaagatt cagccgttct gcaacccgtt caaacggctt
    10441 ccgccatttc caacgcctgc ttgatgtcca cggcgacgac gcgcgatacg cctttttcct
    10501 gcatcgttac gccgacgagc tgctctgcca tttccatcgt caggcggttg tgggagatgt
    10561 agaggaactg ggtttgcgcc gacatttctt tgaccaggtt gcagaagcgc gaggtgttgg
    10621 cgtcgtccag cggggcatcg acttcgtcca aaaggcagaa cggagcgggg ttgaggctga
    10681 acagagcgaa cacgaggctc atggcggtga gggctttttc gccgccggag aggaggtgga
    10741 tggtgctgtt tttcttgccg ggcggacgcg ccataatgga cacaccggcg gtcagtaggt
    10801 cgtcgcctat cattttgaga gtggcttcgc cgccgccgaa cagggtcggg aagaaggttt
    10861 ggactttgcc gttgacggcg tcgaaggttt ctttgaaacg cgctttggtt ttgtcgtcga
    10921 tttgggcgat ggcttcttcc aaaatggtga tggcggcctg cacgtcttcg ctttggctgc
    10981 ggtagtagcc gtcgcgttcg cgcgcttctt cgagttcttg cagggcggcg aggttgaccg
    11041 cgccgagggc ttcgatttgt tgcgagaggc tgccgatgct gctgttcaat actttcggcg
    11101 attctttcgc caacgcttcg agcgcatcca aatcggcggc gcgttcggtc aggttttgat
    11161 ggtagcgttt ggcgttgatc agggcttcct gttgttgcaa cagggcggtt tgggtggcgg
    11221 cctgaagctg tggcagcttg gtttgcaggg tttgtacgcg ggcgtattgt tccctaccct
    11281 gctcctgaat ctgcgcgagt ttctcctgta cgacaatata ttcttcgtcc aaactctgta
    11341 cggcttcgct caactcttcg agcttgatgt gctgctcgtc gttttggaac tcggtttcat
    11401 aggcaagggc aagctcttgc tggcgttcct gccagtctag ggtttgctgt tcgagtcggg
    11461 cgatttgctg ccggtagttt tgtttttgct ggttgagctt gtggacggcg acttcggcca
    11521 gcccgtattg gcggttggct tccaacaggg caagctgcgc ctgtttcaga cggccttgct
    11581 gctcttggcg gctgtgtgcg gtggtctgct gttggtgttc gagttcggcg gcggcttcct
    11641 gcaaagtagc gatgtcgtct gaaagcccgt cggacgtgtg ttgcaacacg gtctgctctt
    11701 ccgccaactg cgccagttcg cgctcgatgt gttcgcggcg gatttgccct tggttggtgc
    11761 gcgccaagag ttcggcggcg cgttgctgcg cttggctgta ttggcgcgtg tgctgctgtt
    11821 gctgctgcat caggttttta tgttgcactt cggacgagcg cacggcggct tctgcctgtt
    11881 tgaacgcggc ttcgtcagcg gagagttcgg gggctaggtt gtccaattcg gatgcgatgc
    11941 cgtcgaggcg cgctttttgg gcaatcaggc tttcctgcgc gggcttggca tagagcagga
    12001 cgctgacctt atcgacctga tgaccttcgg gcgtgagcca gatttgatgt gcgcccaaat
    12061 cgctttgatg cgcgagggca tagctcaaat cgggcgcgca caatacgccg tcgagccagt
    12121 ggtgcaatgc cgtctgaaac ggcggctgcg cttggatttg gttcagcaat gcctgtacgg
    12181 gcagggattt tttgatgccg cctgagaggt cgtctgaaag ccatgccgcc tgcccctgcg
    12241 gcaaaggctc gggcggcacg aaaccttgcg gcacggcgcg ggcgtgcagg cgttcggcaa
    12301 gaatgacgga caaggcgtgc tgccactcgg cgggcgcggt gatgtgttgc cacagttgcg
    12361 gcgcggcggc gtggtcggtt gcctgccaga aatcggcggc ttcctgctgt tgcgacagga
    12421 tttgcgacaa cgcctgctgc tgcgcctgca aggtaatgtg ttgctgcttc aggctttgga
    12481 agcggctcga tgccgtctga aacgcctcgc gggcggcgtg tagagcttct tcggcggcga
    12541 tgatttgttc ttcgtaatgc tcttgccggt tttgcaacaa ggcggcggct tcctgcgcgg
    12601 cggcggtttc ggcttcgtcg ggcaggttca gggcttggtt ttcctgtttc agacggcctt
    12661 tgtgctcttc gtgcccggca atcgtttgtc cggtatgggc aagctgctgc tgtttcaacg
    12721 ccagttcgcg gcggatgcgg tttgcctcgt cctgctgggt ttggaaggcg gcattgagcg
    12781 cggtttgggt ttcttccaat tcgggcagac gctcttcgtg ttcggcaacc tgcatcgccc
    12841 actccgccag ctcggtttgc ttttcttcga cgtataactc gttttcttcc agctgcacgc
    12901 ggatttgctg ctgctcttga tgaatacgct gcatctgcgc ctgcgccgcc tgcttgtcgc
    12961 gttcgatgcg ttggtgcagg ttttgctgat ggcggatttg ttcttccaaa cgggcaatct
    13021 gctcgcgcaa cacaccgcgt ttgttgccca gttcgtgtac cgcctgctgc tgcgactgtt
    13081 cggcggtctg caaggcgtgt acttcgtcgt ttaacgcctg aacctgcgcg gcggtttcgt
    13141 cctgctgcgc ctgcaaagac tgatgctgcg cggtcgcctt gtcggcggcg gcaagcgatt
    13201 gctgccattg ggcgtaatcg agcaaatcct gttgctggtt cagctgcgcg gtcagggatt
    13261 tgtagcgttc ggcggtttcc gcctgtttct ccagcttttc cacctgacgc gctaactcgt
    13321 tctgcaaatc gcccaaacgc tgcaaatgct cgcgcgtgtc tttcagacgg ccttccgtct
    13381 ccttacggcg ttccttatat ttggacacgc ccgccgcttc ctcgatatag gcgcgcaatt
    13441 cctccggccg cgcttcgatg atgcgcgaaa tcatcccctg ctcgataacg gcataaccgc
    13501 gcgcgcccac gcccgtaccc aaaaacaaat cggtaatgtc gcggcggcgc acggtctgat
    13561 tgttgatgaa ataagtcgat tcgccctgac gcgtcagctg ccgcttgatg ctcacctcgg
    13621 catactgccc ccacgccccc tgcaaactgt ggtcgctgtt gtcaaatacc agctccaccg
    13681 aagccctcgg cgcaggacgg cgcgtcgccg caccgttaaa aatcacgtcc tgcatactct
    13741 cgccgcgaag ctgcttcgcc gaagcctcac ccaacaccca gcgcaccgcg tcaatcacat
    13801 tcgacttgcc gcaaccgttc ggcccgataa ccgcgacaag ctgccccgga acatgaatcg
    13861 tggtcgggtc ggtaaaagat ttgaagccgg agagtttgat gtgggtcagg cgcataatgg
    13921 tcggaaaaaa taaaaaagaa gcgtatttta acggaaatcc cgccgcacca ccccatatct
    13981 tgccggcaaa accttaccgc atcccgcacc cgcgatgccg tctgaagcct tcagacggca
    14041 tttttaacgc gccgaacccc ggttccgcca atgcccgatg cttggcgcgg catttgccgt
    14101 attgccccgc cgccgggcgc gttataatcc gccacgacat ccgcccgatt tggaaacctg
    14161 cctatgaaac ccgcctattt catttccgac ctgcatttga gcgaaaagca gcccgaactg
    14221 accgcgctgt tgctgcgttt tttacgttct tccgccgcca ggcaggcgcg ggcggtttac
    14281 attttgggcg atttgtttga tttttgggtg ggcgatgacg aagtttccga gttgaatact
    14341 tcgattgcgc gtgaaatcag gaaattgtcc gacaaaggcg ttgccgtgtt cttcgtcagg
    14401 ggcaaccgcg acttcctgat cggtcaggat ttttgccggc aggcgggcat gacgctgctg
    14461 ccggattact cggttttgga cttgttcggc tgcaaaaccc tcatctgcca cggcgacaca
    14521 ttatgcaccg acgacaaggc ataccaacgt ttccgcaaaa tcgtgcatcg gaagcggctg
    14581 caaaaactgt tcctgatgct gcccctaaag tggcgcacgc gccttgccgc caaaatcagg
    14641 cgtgtcagca aaatggaaaa acaggtcaag cccgccgata ttatggatgt caatgccgcc
    14701 tttaccgcgc ggcaggtacg cgccttcggt gcggaaaggc tgatacacgg acacacccac
    14761 cgcgagcata tccatcacga aaacggcttt acccgcatcg ttttgggcga ctggcataac
    14821 gactatgctt caatcctccg cgtggacggg gacggcgcgg tattcgtgcc gctggaaaaa
    14881 tactgaaaat gccgtctgaa gcctttcggg cggctttttt tacacgcccc tttcccacac
    14941 tccctccgcc gcatcatcac catccttaac ccgcattaag gggcgttatc gataaaatgc
    15001 ttgaccgatt acataagatt acgtaaagtg tgcaaacgca taacaattgg tcttaccaat
    15061 ttatctttta accaaaatat cgggtgtacg ggatttgaac gtctttccaa acctcgacgc
    15121 gccttatgat gcaaatgcct aaaaaggatt cgttatggca cttttcctca gcatattccc
    15181 catcgtcctg ctgatttggc tgatggtgaa aaaaaacagt atgccctcct acgtcgcgct
    15241 gccgattacc gcagtgctga tttacgccat caaacttttc tacttcgacg atgcgggcat
    15301 gctgctcaac gccaccgccg cttccggcct cgtcaaaacg ctcacgccga ttaccgtgat
    15361 tttcggcgcg attatgttca accgtatgat ggaaaccacg ggctgcatcg atgtcatccg
    15421 caaatggctg gcgaccatca gccccaaccc cgtagcgcaa ctgatgatta tcggctgggc
    15481 ttttgccttt atgattgaag gcgcatccgg cttcggcacg cctgccgcga ttgccgcgcc
    15541 gattctgatg agcttgggct tcaacccgtt gaaagtggcg attttcactt tggtgatgaa
    15601 ctccgtcccc gtctctttcg gcgcggtcgg tacgccgacc tggttcggtt tcgcaccgct
    15661 gaacctgagt gccgaagaca tcctcgccat cggcaggcag accggcgtaa tgcacttctt
    15721 cgcaggtttc gtcatccccg tcatcggctt gggcttcatc gtaccttggt ctgaaatccg
    15781 caaaaacttg ggcttcgtcg ccattgccgt cttctcctgc accattcctt atgtcgcatt
    15841 ggcgatggtc aacgaagaat tcccgtcgct cgtcgccggc gcaatcggcc tgatggtgtc
    15901 cgtattcgcc gccaaccaag gctggggctt gagcaaagac cacgccaaag acccgaatgc
    15961 cgaaaaagtg ccgttcgccc aagtcgccaa agcactcgcc cctttgggta tgctgatcgg
    16021 catgctggtg gttacgcgca tcaaacagct cggcatcaaa ggcattttga ccagcaaaga
    16081 agaatggttc agcttccaac tgccgtttga tttgtccaaa atcaccgtca gcgactccct
    16141 gacgattacc ttcggcaata ttttcggaca agatgtcagc gcgtcttacc aaacgctgta
    16201 cgtcccggct tggattccgt ttgtgctgac cgtttggatt tgcatcctgc tgtataaaac
    16261 caaattcaaa gatgcctgga cgatttattc cgtaactttc aatcaaacca aaaaaccgct
    16321 gcttgccctg atgggcgcgc tgattatggt tcagctgatg ctggtcggcg gcgacaattc
    16381 gatggtgaaa atcatcggta aggaatttgc cgcaatggcg ggcgaacact gggtttattt
    16441 ctcgccgtat ctgggcgcga tcggtgcgtt cttctccggc tccaacaccg tgtccaacct
    16501 gactttcggc ccgattcagc agcaaatcgc cttggatacc ggcctgtccg ttaccctgat
    16561 tctggcgttg cagtccgtcg gcggcgcgat gggcaatatg gtgtgcctca acaacatcat
    16621 cgccgtatgt accgtattgg atgtgaaaaa ttccgaaggt gcgattatca agaaaaccgt
    16681 tatcccgatg gcgatttacg gcgtgattgc cgtcgtcgcg gcaatgattt tcttcctcta
    16741 ggcgaaacgc caccatccat agcggcagca cgcggggaac ggaaaccgcc gttccccgtc
    16801 tgggcggcgc gtcgggcaga atcccggtgc cggaacagcc cgccccgcca aacaaatgcc
    16861 gtctgaaacc ggaaaaggct tcagacggca tttttccgcc gtttgcattc aggcgtaatg
    16921 atgatgcggc atcttgccgt caaggcggta gcgcgtgccg caatacgggc aggcaacgct
    16981 gcccgattct ccttcgcaca aaggcaaaaa cactctcgga tgcccgttcc actgctcgtt
    17041 gtcgggtccc gagcaataca gcggcagatt ttccggcaac acggaaattt cctgcagatt
    17101 cagattgtcc atttgatttt cctttgcgtg gttggcgtgc gcccatttta cgccatcggc
    17161 aggctaaagg atattttcgg cgcaaagccg caatccgcta taatccccac ttttcagacg
    17221 gcataccatg actgcgctta cccttccgga agacatccgc caacaagagc catccgccct
    17281 gctctatccc ctcgtttccg cctacctcga acacaccgcc caaaccggcg acgaatccct
    17341 ctcctgcctg tccgacgacc agcacacgct gaccgcattc tgctacctcg acagccaagt
    17401 cgaagaaggc ggcttcgtgc aactcatcgc ctccggttac ggcgaatata ttttccgcaa
    17461 cccgcttgcc gacagcctgc gccgctggaa aatcaaagcc gtgccgaaag tcttggacaa
    17521 agccaaagcc ctctacgaac aacacggcaa aaccatcgaa acgctcgccg acggaggcgc
    17581 agacatcgaa tccctgcgca aacagttccc cgactttgaa gaatgggacg gcgcatacta
    17641 cgaagccgcc gaacaagacc tgcccctgct tgcagaacac atacagtcaa actgggaaac
    17701 cttcgcccat atcgggcagg cgtgattgcg tctgtttcca gcccgtgtaa aacagcgtaa
    17761 aatcggcaaa cccgaatgac cttccgtccc catcaaggag caagctatgt tcttcaagca
    17821 catcgaagcc gcccccgccg atccgattct cggtttaggc gaagcgttca aagccgaaac
    17881 ccgccccgaa aaagtcaacc tcggcatcgg cgtttataaa gacgcatccg gcgcgacacc
    17941 cctcgtcaaa gccgtcaaag aagccgaaaa acgcctgttg gaaagcgaaa ccaccaaaaa
    18001 ctacctcacc atcgacggcg ttgccgacta caacgcgcaa acccaaatcc tgctgttcgg
    18061 caaagaccac gaaatcatcg ccagccgtcg cgccaaaaca gcgcaaagcc tcggcggtac
    18121 gggcgcattg cgtattgcgg ccgagtttgc caaacgccag ttgaacgcgc aaaccatctg
    18181 gatttccaat ccgacttggc ccaaccacaa cgccatcgcc aaagcggtcg gtatccaaga
    18241 caaaccttat cgttactatg atgccgccaa acacggtttg gattgggacg gcatgattga
    18301 ggacttgagc caagcgcaaa aaggcgacat cgtcctgctg cacggctgct gccacaaccc
    18361 taccggcatc gaccctacgc ccgaacaatg ggaaactctg gcaaaacttt ctgccgaaaa
    18421 aggctggctg ccgctgtttg actttgccta ccaaggcttc ggcaacggtt tggaagaaga
    18481 tgcctacggc ttgcgcgtgt tcttgaaaca caatacagaa ttgctgattg ccagctctta
    18541 ttccaaaaac ttcggtatgt acaacgagcg cgtcggcgcg ttcactttgg tggccgaaga
    18601 tgaagaaaca gcagcccgcg cccacagcca agtcaaaacc atcatccgta ccttgtattc
    18661 caacccggct tcacacggtg cgaacaccat tgcgctggtg ttgaaaaatg atgatttgaa
    18721 agcacaatgg attgccgaac tcgatgaaat gcgcggccgc atcaaagcca tgcgccaaaa
    18781 atttgtcgag ttgctcaaag ccaaaggtgc aagccaaaac tttgatttca ttatcgaaca
    18841 aaacggtatg ttctctttca gcggattgac tcccgaacaa gtcgaccgtt tgaaaaacga
    18901 gtttgccatt tatgccgtcc gctccggccg catcaacgtt gccggcatta ccgacgacaa
    18961 catcgattat ctgtgcgaaa gcatcgtgaa agtcttgtaa aacaaaagcg catacgaaat
    19021 gccgtctgaa ccttaaccag ttcagacggc atctgttttt tgttaaaaaa caataaacca
    19081 taacaatttc aaacaagcta aaaaacatct ataaaatcaa cccaatatga tgaactcaaa
    19141 taaaaaatac gaatatcatc attctcaaat tcaaaatttg aacgccacag tattatccga
    19201 agccacaaaa acctttccgc cgtcattccc gcgcaggcgg gaatccggga acccaatgct
    19261 gcaagaattg attagaaaca actgaaaccg agcaaactgg attcccgcct gtgcgggaat
    19321 gacgaaataa ggcgagtaaa actgatgaaa caaattgatt aaaaacaata acttatatta
    19381 ttttatttaa attttcgata aaatcaattt tccgtattca atactgctcc aatcaattcc
    19441 cgcgcaccgt cgtccgccaa tttcttagcg acagcgcgtc cgagcgcgtc ggcatattcg
    19501 gcaggggctt gcgcgtccgc ctgcaaaatg accgaaccgt cggggtgtcc gaccagtccg
    19561 cgcaaggtca gcaagccgtt ttcttccgtg caatatgcgg ccaaaggcac ttggcagctt
    19621 ccgcccaaag cgcgcgccaa agcgcgttcg gccgtaacgc aggcgtgtgt ggtatcgtgg
    19681 tttagcggtt ttaaaacctc atacaaatct tcgcggtgcg cggcaatttc gatacccaat
    19741 gcgccttgtc cggcggcagg caggctgtcg gattccgaca aaatcatgcg gatgcgtccg
    19801 tccaattcca gacgctgcaa accggcggca gccaagataa ttgcgtcgta ttcgccgtta
    19861 tcgagtttag acaaacgggt ttgcacattg ccgcgcaaag gtttgataac caaatgcgga
    19921 tagcgcgcac gcaactgggc ttcgcggcgc aggctggatg tgcctacgac ggcgcctttg
    19981 ggcatttctt ccaaacgcgc gtattggttg gacacaaacg cgtcaaacgg attggcgcgt
    20041 tcgccgatgg ctgcaagcgc gaaaccttca ggcaaatcca tcggcacatc tttaatcgaa
    20101 tgcacggcca agtcagcgcg cccgtcatat aaagcctgtt ccaactcttt gacaaacaag
    20161 cccttaccgc cgacttttga caaagttttg tccaaaatct ggtcgccgcg cgtggtcatg
    20221 cccaaaatct cgacttcgca atcgggatac agggctttca gacggccttg gatatgcttt
    20281 gcctgccaca tagcaagcag gctttcgcgg ctggcgatga cgagtttttt cgggttcatg
    20341 ttcaatgcgt tcaaagaatg gaaacggcgt gaagtctatc atattttgaa cgtttcttca
    20401 gacggcaccg tcagatctat gttatattta cacccacaaa acacgaaacc cgccacaatg
    20461 aaacgcacca aaaaataccc tttcttaacg ttgcagcggc aacgtttcca tttgaacttt
    20521 gaaaacgcct cttccgccgc cggcatccca gccgaacgcg atttctaccg ctgggcgtgg
    20581 tctgccttga aaagcggata ccgccgcgcc gacatcagcc tgattcttct ggacgaagaa
    20641 gaagcccgag cctacaaccg cgactaccgc ggcaaagatt acgccaccaa tgtattgagt
    20701 ttcgcgctca acgaaggcga aatcctgccc tgccaagttt cggaaaaact gtacggcgat
    20761 ttgattatct gcccgcaagt ggttttgaaa gaagccgccg aacagggcaa aacgcccgaa
    20821 cggcattttg cccacctgac catacacggc gttttgcacc tgatgggcta cgaccacatc
    20881 gaagacgatg aagccgaaat aatggaagcc gaagaaatcc gcctgatgct ggcggcaggc
    20941 ttccccaacc cctaccaaga ggacgaatat taaaatggac ggtacgcagt cgaaacccaa
    21001 gtttttcgaa cgcctgatct cccgacttgc cggcgagccc gactccgccg aagacgtatt
    21061 gaccctgctg cgccaagcgc acgagcagga agtttttgat gcggatacgc ttttaaggtt
    21121 ggaaaaagtc ctcgattttt ccgatttgga agtgcgcgat gccatgatta cgcgcagccg
    21181 tatgaacgtt ttaaaagaaa acgacagcat cgaacgcatc accgcctacg ttatcgatac
    21241 cgcccattcg cgcttccccg tcatcggtga agacaaagac gaagttttgg gtattttgca
    21301 cgccaaagac ctgctcaaat atatgttcaa ccccgagcag ttccacctca aatcgatatt
    21361 gcgccctgcc gtcttcgtcc ccgaaggcaa atcgctgacc gcccttttaa aagagttccg
    21421 cgaacagcgc aaccatatgg cgatcgtcat cgacgaatac ggcggcacgt cgggtttggt
    21481 aacttttgaa gacatcatcg agcaaatcgt cggcgacatc gaagatgagt ttgacgaaga
    21541 cgaaagcgcg gacaacatcc acgccgtttc ttccgaacgc tggcgcatcc acgcggctac
    21601 cgaaatcgaa gacatcaaca ccttcttcgg tacggaatac agcagcgaag aagccgacac
    21661 cattggcggc ctggtcattc aagagttggg acatctgccc gtgcgcggcg aaaaagtcat
    21721 tatcggcagc ctgcaattta ccgtcgcacg cgccgacaac cgccgcctgc atacgctgat
    21781 ggcgacccgc gtgaagtaag cagagcctgc ccgcaccgcc gtttctgcac agtttaggat
    21841 gacggtacgg acgttttctg tttcaatccg ccccatccgc caaacataaa aatgccgtct
    21901 gaaaccggaa aacaggttca gacggcattt cgcttacccg cttatttttt gctcaaagtc
    21961 agccccgtcc agccgaataa cagggttaaa gccaaactca aatagcagaa aaaggcatag
    22021 ggcagatatt cccagaccgg cacacccagc gcatggctga taaatacgcc gcacacgctc
    22081 cacggaacaa gcgggttgat gaccgtaccc gcgtcttcga gcgtacgcga gaggttgcgg
    22141 gaatgtagtc cgagcttatc gtaaacgggt ttgaacgttt cacccgacaa caaaatactc
    22201 aaatattgct cgccgatcag gaaattaacc ccgaccgaag tcatggcaac gctgaatgtg
    22261 gcacgtccgg cattcgtcaa aaagctgcgg acggcatcca gcagggaagg aatcgcgccc
    22321 agcgcaaaca gcagcccgcc caaactcatc ccgagaatca cgatggtttg cgtgaaaaac
    22381 atactttcca agccgccgcg cgaaatgagt ttggcgatgt ctttaaacgc ttcgccttcg
    22441 agtttgtagc cgccgtaaaa ccacgcgccg agctgacgca gatcgggcgt gctgtgcaga
    22501 tacgttacgg caacggcggc aatgacggta aagagcatag cgaccacggc attgacgcgc
    22561 atcaatgcca aaacgaccaa cagcgcaaac ggaatcagcg aatagcagtg caccaatccc
    22621 gtggcttcaa gctggctgcg gaaggattcg acgctgttca aatcctgcgc ggcgacgctg
    22681 ggaagaagcc acagcatcag tgccgcactg atgagccacg cgggaatggt ggtgtacatc
    22741 atatttttga tgtgttcaaa caggtcgata ccgacaatgg acgcggaaat gcccgtcgta
    22801 tcggaaagcg gggacatttt gtcgccaaaa aatgcgcccg aaacaatcgc gcccgccgtc
    22861 atcgccatat cggcctgaaa cgccgccgcc atacccataa aggcaacgcc gacagtggcg
    22921 caggtggtca ggctgctgcc gatggacacg ccgatgacgg aacacagcgc gaaggcggaa
    22981 aaataaaaat aagtcgggga aatcagtccg aaaccgtaat acatcagcgt cggaatcgcg
    23041 ccgctcatca tcagcgcgct gaccatcagc ccgatgaaga aaaacaggta aatcgcgccc
    23101 ataccctgat tcaacgcgcc tatcatgccc tgctgcatat cgttgtattt caaaccgcgc
    23161 gccaagccgt acaaaatcag cacgacgatg gcggcaataa tggacatatg cggcagccac
    23221 tccaatgaaa tgatggtata gcccatcgcg gcaatcagag cgacgacgac ggcaagtgcc
    23281 tcaccgcgcg gcatatcgag taaggatttg aaagcgaaca tgattctttg cccgatttga
    23341 tataaagtta acggattcta acacaccata ccgaatccgc ccgacgtttt cagacggcat
    23401 tttagcgttt tacaaaagcc ggacagaaac aaaacggcaa ttttctcaat ttaaattaat
    23461 ttttttgaaa tataattttt tatttttttg tttgttgaca tataagactt ttatggattg
    23521 aagtattaaa acctcggcac acacgccgca aacaccggta cgcaaaaatg ccgtctgaaa
    23581 gatgttcaga cgacatttct caagaaaaag attatttgtc cgccctatat ccgtacaccg
    23641 caaaaaacac gatatacaga taacagatga cggaaacgac aaacgaagac atcagggtgt
    23701 aagtatctgc cacccagccc tgcacgacag gaacgaccgc accgccgaca atcgcggtac
    23761 acagtacacc ggaagccgcg ttggtaaatt ttcccaatcc tttggttgcc aaagagaaaa
    23821 tcgtcgggaa cataatcgag ttgaaaaaac cgatggcaag cagcgaccac atcgccacat
    23881 ccgcattgcc gctacccgtc gccatcgcga cggcaagcag tacgaccgca gccgatgcgt
    23941 taaacgccaa ataacggttg ggcgcgaatt tcgccatcac cgccgaaccg aggaaacgtc
    24001 cgaccatcgc gccgccccaa tagaacgaca ggtaatgcgc ggcagaagca tgatccagcc
    24061 ctttcagata acccaatacg ttgaccatca acgaaccgat agacacctcc gcgccgacat
    24121 agcagaaaat gcctgccgta ccgaacacga gatgtttgta ttgccatacg ctggttttgc
    24181 cgtcgtggtt gtgcgcgctt tcctcggcgg caattttgcg cgcgtcgggc agccggatca
    24241 ttttcacgaa aacggcaagg ataatcagca gccccgccag tcccaaatag ggaatctgta
    24301 cggaagaaat ctgttccgcc ttgctgacgg tttgggttgc gtccgccaga atcaggaacg
    24361 cgccgatttg cggcgcaatg gtcgtaccca aagcgttaaa cgcctgaacc agcgtcagtg
    24421 ttgccgattc cttgccgggt ttcgccagca gggtaacata aggattaccg gcgacctgaa
    24481 gcagcgttac gccggaagcc aaaataaaca acgcgcccaa aaataccgcg taagaatggc
    24541 tacccgcagc aggataaaac agcaggcatc cgaccgccgt cagcagaaag ccgccgataa
    24601 cgccgttttt gtagccgact ttgccgacaa aagcccccat cgggatggac atcaccgcat
    24661 aggcggtaaa gaaacagaat tggatcagca tcgcctgaac gtaagacagg tcgaaaattt
    24721 ctttcaaatg agggataagg atgtcgttca tgcaggtaat aaaacccatc atgaagaaca
    24781 gcgtggtcaa gacgaccaat ggggacgtat gattgttttg tgattgcgca gacatgattt
    24841 gcctttcgtg gtgtcggaat attacccgtt tcaagaaaat agaaattgac atttcttaac
    24901 ggcaatgcaa atcatactga tatttgaaca ttttgcaaac tttatcggat gcaggcaatg
    24961 cgccgatctg aaattcaagc agcagaaatt aatattttac agttgcttgc atagatttta
    25021 atagatttta aaaaattccg gcggacttgc aaaaaccgtt cccaataaaa tgaaaatccg
    25081 ccgccgtatc cggaaaattc ggaaatgccg catcgtggca tcaaaaccgg agcggaaaga
    25141 atgtcgtatg cccgacaaaa aaggggcata cggctgtgcc gtattttttg caccgtcctc
    25201 cgcccttcgg cgggggcgtg aaaata
//
LOCUS       DAWEYF010000007        24708 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.007, whole genome shotgun sequence.
ACCESSION   DAWEYF010000007 DAWEYF010000000
VERSION     DAWEYF010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24708
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.007"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            167..790
                     /gene="lolA"
                     /locus_tag="WGN93_000220"
     CDS             167..790
                     /gene="lolA"
                     /locus_tag="WGN93_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ0226192.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPALFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1063..2202
                     /locus_tag="WGN93_000221"
     CDS             1063..2202
                     /locus_tag="WGN93_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0226193.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAHPPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2335..3391
                     /locus_tag="WGN93_000222"
                     /pseudo
     CDS             2335..3391
                     /locus_tag="WGN93_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            3432..3962
                     /locus_tag="WGN93_000223"
     CDS             3432..3962
                     /locus_tag="WGN93_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ0226194.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(3979..4110)
                     /locus_tag="WGN93_000224"
     CDS             complement(3979..4110)
                     /locus_tag="WGN93_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HEZ0226195.1"
                     /translation="MPSEPEKRLSDGIFACNSNAAGQNQGASDTVIGHPVRMNLGLT"
     gene            complement(4119..5714)
                     /locus_tag="WGN93_000225"
     CDS             complement(4119..5714)
                     /locus_tag="WGN93_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ0226196.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMEIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIENPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIEWAPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLTFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCEDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(5821..6216)
                     /gene="hisI"
                     /locus_tag="WGN93_000226"
     CDS             complement(5821..6216)
                     /gene="hisI"
                     /locus_tag="WGN93_000226"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ0226197.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGSAWETADAVLKDEKEIYGSTH"
     gene            complement(6247..7014)
                     /gene="hisF"
                     /locus_tag="WGN93_000227"
     CDS             complement(6247..7014)
                     /gene="hisF"
                     /locus_tag="WGN93_000227"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ0226198.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPGNTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(7027..7764)
                     /gene="hisA"
                     /locus_tag="WGN93_000228"
     CDS             complement(7027..7764)
                     /gene="hisA"
                     /locus_tag="WGN93_000228"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ0226199.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(7797..8435)
                     /gene="hisH"
                     /locus_tag="WGN93_000229"
     CDS             complement(7797..8435)
                     /gene="hisH"
                     /locus_tag="WGN93_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ0226200.1"
                     /translation="MQTAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(8565..10067)
                     /gene="pta"
                     /locus_tag="WGN93_000230"
     CDS             complement(8565..10067)
                     /gene="pta"
                     /locus_tag="WGN93_000230"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ0226201.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGFAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRVNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(10252..11310)
                     /gene="fbpC"
                     /locus_tag="WGN93_000231"
     CDS             complement(10252..11310)
                     /gene="fbpC"
                     /locus_tag="WGN93_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ0226202.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSAAPAGTRGTL
                     LIRPEQFSLYPHSAPAAAIHAVVLKTTPKARHTEISLRAGQTVLTLNLPAAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(11331..12848)
                     /gene="fbpB"
                     /locus_tag="WGN93_000232"
     CDS             complement(11331..12848)
                     /gene="fbpB"
                     /locus_tag="WGN93_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ0226203.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(12916..13911)
                     /gene="fbpA"
                     /locus_tag="WGN93_000233"
     CDS             complement(12916..13911)
                     /gene="fbpA"
                     /locus_tag="WGN93_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ0226204.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(14163..14633)
                     /locus_tag="WGN93_000234"
     CDS             complement(14163..14633)
                     /locus_tag="WGN93_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ0226205.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGWEQELVLIW
                     RAEADIGNGGILQFVCNWSFPAAEKTCSVLKKIGAIHSAMLIHRAADTLDKEIRHLQS
                     EGKNLKEMWDITQHLDNKTVSLLNSLDEQYWQDPDKLYLLGWQYYSGNPVQTAF"
     gene            complement(14690..16066)
                     /gene="argH"
                     /locus_tag="WGN93_000235"
     CDS             complement(14690..16066)
                     /gene="argH"
                     /locus_tag="WGN93_000235"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ0226206.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAKLLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSKLPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMSA"
     gene            complement(16085..16954)
                     /gene="galU"
                     /locus_tag="WGN93_000236"
     CDS             complement(16085..16954)
                     /gene="galU"
                     /locus_tag="WGN93_000236"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ0226207.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(16982..17581)
                     /gene="rdgB"
                     /locus_tag="WGN93_000237"
     CDS             complement(16982..17581)
                     /gene="rdgB"
                     /locus_tag="WGN93_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ0226208.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFEPYGITVLPQSEFSIPECP
                     EPYSTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALAELLRKLAL"
     gene            complement(17574..17807)
                     /locus_tag="WGN93_000238"
     CDS             complement(17574..17807)
                     /locus_tag="WGN93_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226209.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(17915..18448)
                     /locus_tag="WGN93_000239"
     CDS             complement(17915..18448)
                     /locus_tag="WGN93_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ0226210.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(18550..19008)
                     /gene="nudB"
                     /locus_tag="WGN93_000240"
     CDS             complement(18550..19008)
                     /gene="nudB"
                     /locus_tag="WGN93_000240"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ0226211.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            19219..19295
                     /locus_tag="WGN93_000241"
     tRNA            19219..19295
                     /locus_tag="WGN93_000241"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19253..19255,aa:Pro,seq:ggg)
     gene            19453..21852
                     /gene="mafB"
                     /locus_tag="WGN93_000242"
     CDS             19453..21852
                     /gene="mafB"
                     /locus_tag="WGN93_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ0226212.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLVDRFHNTGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLANKRHPKTKVPFDGKGFPNFEKDVKYDTRINTAVPQVNPIDEPVF
                     NPKGSVGSAHSWSITARIQYAKLPRQGRIRYIPPKNYSPSAPLPKGPNNGYSAGNLSK
                     KVLTLVYINGKLKFGPSSLPSSALKAPVPIVGKAEAPPGKAVPVGEARIPSNPKAVKG
                     TTVTLSQEQRLANGELIPKGSVVTWSDNAVKVVRPDGKKRRFNSRDWEQKALPKPQLP
                     KDYRDDINIGGNNPRFNQQRHEKIESHNPNRIEEIRQRNAVSSAERQADALKRMQTSG
                     RTRLPGQPQKGKPGAAREMSSSDNPNQTAEAFARRYLGRKPTLMERVEGEKLYGGKCV
                     GCWKAQMPDGTFVVYRPAGNASMTKGTTASVDINNPTLNNLNINLKGKPTELKFKFPA
                     R"
     gene            21863..22324
                     /locus_tag="WGN93_000243"
     CDS             21863..22324
                     /locus_tag="WGN93_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226213.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            22350..22598
                     /locus_tag="WGN93_000244"
     CDS             22350..22598
                     /locus_tag="WGN93_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ0226214.1"
                     /translation="MEIKKPDGSWEMKKGRGGKPMTNHSMFPKDWDEARIRAEVTSAW
                     EKRKELEGQKWRGTSKSGVEIEGFTEPNRTAYPLYNSK"
     gene            22625..23044
                     /locus_tag="WGN93_000245"
     CDS             22625..23044
                     /locus_tag="WGN93_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226215.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            23122..23205
                     /locus_tag="WGN93_000246"
                     /pseudo
     CDS             23122..23205
                     /locus_tag="WGN93_000246"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            23202..23444
                     /locus_tag="WGN93_000247"
     CDS             23202..23444
                     /locus_tag="WGN93_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ0226216.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            23522..23767
                     /locus_tag="WGN93_000248"
     CDS             23522..23767
                     /locus_tag="WGN93_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ0226217.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGKDKI
                     PSYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            23770..24159
                     /locus_tag="WGN93_000249"
     CDS             23770..24159
                     /locus_tag="WGN93_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226218.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSYSLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            24377..24649
                     /locus_tag="WGN93_000250"
     CDS             24377..24649
                     /locus_tag="WGN93_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226219.1"
                     /translation="MPIDNIPFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALT
                     GIAFLRGIDVYDPPVSKEKALKALKKHPEIYQRFQHFFPFVELPPL"
BASE COUNT         5931 a         5831 c         6911 g         6035 t
ORIGIN      
        1 cggcacacat taaagggcag cgtggcgcgc ctgccttttc cggtgggcaa aaaatcggcc
       61 ctcggaaaac gctgtttgta aaatgcaaac cgcccgtaac gccgcccgta tgattgtttt
      121 gccgcgccga tactttacgc cacacccatc ccgacaagga aaaataatga tgaaaccgca
      181 caacctgttc caattcctcg ccgtttgctc cctgaccgtc tccgtcgctt ccgcacaggc
      241 gggcgcggtg gacgcgctca agcaattcaa caacgatgcc gacggtatca gcggcagctt
      301 cacccaaacc gtccaaagca aaaagaaaac ccaaaccgcg cacggcacgt tcaaaatcct
      361 gcgcccggcc ctcttcaaat gggaatacac ttcgccctac aaacagacta ttgtcggcga
      421 cggtcaaacc gtttggctct acgatgtcga tttggcacaa gtgaccaagt cgtcccaaga
      481 ccaggccata ggcggcagcc ccgccgccat cctgtcgaac aaaaccgccc tcgaaagcag
      541 ctacacgctg aaagaggacg gttcgtccaa cggcatcgat tatgtgctgg caacgcccaa
      601 acgcaacaat gccggctacc aatacatccg catcggcttc aaaggcggca acctcgccgc
      661 catgcagctt aaagacagct tcggcaacca aacctccatc agtttcggcg gtttgaatac
      721 caatccccaa ctctcgcgcg gcgcgttcaa gtttaccccg cccaaaggcg tggacgtgtt
      781 gagcaactga tgccgtccgc cccgatgccg tctgaaagcc gccgaggctt cagacggcat
      841 tttcacgcag gcggaacaat gtcccgcatt accgcccgat cgggcatcgg aacggcaaac
      901 ccgtgaaaat taacggttgc gccccggttg tttttgccgt ttaatgcaaa ccttgctgca
      961 ccaagggcca agaaagccga ccggccgccc ccacagcttc cgatgcaggc ggcccggccg
     1021 tccctgcaat gttttttatt tttgaacgaa aggtcgaaaa ccatgaaaaa aacactggtg
     1081 gcggcggcaa tcctgagcct cgccttgact gcgtgcggcg gcggaagcga taccgccgcc
     1141 caccccccct ccgccaagcc cgaagccgaa caatcgggca aactcaatat ctacaactgg
     1201 tcggattatg tcgatcccga aaccgtcgcc gcctttgaaa aagaaaccgg catcaagacg
     1261 cgttccgatt attacgacag caacgaaaca ctggaggcaa aagtcctgac cggcaaatcc
     1321 ggctacgacc tgaccgcgcc gtccatcgcc aacgtcggcc ggcaaatcaa agcgggcgcg
     1381 tatcagaaaa tcgacaaggc gcaaatcccc cattacggca acatcgataa agatttgctg
     1441 aaaatgatgg aagccgtcga tccgggcaac gaatacgccg tcccctattt ctggggcatc
     1501 aacaccttgg caatcaacac gcggcaggtg caaaaggcat tgggtacgga caagctgccc
     1561 gaaaacgaat gggatttggt gttcaacccc gaatacaccg ccaaactcaa atcctgcggc
     1621 atcagctatt tcgacagcgc aatcgaacag attcccttgg cgttgcacta tttgggcaaa
     1681 gaccccaaca gtgaaaatcc cgaagacatc aaagccgccg tcgatatgat gaaagccgtc
     1741 cgaggcgacg tgaaacgctt cagctcttcc ggctatatcg acgatatggc ggcgggcaac
     1801 ctgtgtgccg ccatcggtta cggcggcgat ttgaacattg ccaaaacccg tgccgaagaa
     1861 gccgcaaacg gcgtggaaat caaagtattg accccgaaaa ccggcgtggg cgtgtgggtg
     1921 gattccttta tgattccgcg cgacgcgcaa aacgtcgcca acgcccaccg ctatatcgac
     1981 tacacgctcc ggcccgaggt ggcggcgaaa aacggcagct tcgttaccta cgcgcccgcc
     2041 agccgtcccg cgcgcgagct gatggatgaa aaatacacct ccgacgcatc gattttcccg
     2101 aacaaagaac tgatggaaaa aagtttcatc gtatcgccca aatccgcaga atccgccaaa
     2161 ctgggcgtga agctgtggca agggctcaag gccggaaaat aaccgcaacc cctgccgtct
     2221 gaaacctttc gggcggcagg aaacggcgcg tccgttatca aacagggggg cgtttcccct
     2281 cctgccggtt atgattgggt taagattaaa atgatttagt aaaatgagaa agatatggat
     2341 ttaagtatcg tagttcccat ttataatgtc gaaagttatt tggaagcgtg tttaagttcc
     2401 atagaaccta tattaagtaa tgaaaatgtc gaacttatcc ttgtgaatga cgggtcaaaa
     2461 gacggaagtg aagatatatg ttataaatat atagataaaa caacaaacaa caaacaacaa
     2521 acaacaaaca acaaacaaca aacaacaaac aacaaacaac aaacaacaaa caacaaacaa
     2581 caccagatac cgaacaccaa acatcaaata tatatatcag gataaccaag ggacggcaga
     2641 agctaggaat accggaataa aaaattcaaa cggaaaatat atagtcttta ttgattcaga
     2701 tgattttatt aattgtcagg tcttgctgga ttttcttagt aaagatgata ttgatatgcc
     2761 ggatgtggtt tttttaaatg cggttaaata tgataaggga agtgtttcac attttggcga
     2821 agattatcag cctgaaaaaa tactcaagca atccaaagtc gaagttttga aaggattatg
     2881 ccgatttaga aaatttccgg gttcggcgtg taataagatt ataaaaaggg aattgattat
     2941 caaagaaaaa ctgttttttg aaaaagaggt ttatgccgaa gatatcgaat ggtcaatgag
     3001 attatttaat gcggcaacaa ctttttctta tttggacggt tgttattact attatcggca
     3061 gggaagaaaa gattctaaaa caggaactgt ttcggaaaaa agtataaagt cattattata
     3121 tattttggag aaaaatgcgg aaatggaatt tgatagggat atatcaagtt atctttattc
     3181 ttttctttcc tacgaatatc tcgttttgct ttttatcatg acgagtaaaa atatagagtg
     3241 tgatgctgat ataaaaagaa gggcgtatca tttaaggttt atgctgttaa agtccaataa
     3301 attgatatat aagctgatat ttccgataat cacattattc ggggttgata ttacaggcag
     3361 gattttaaaa gcaatcaggg ggaatattta ataaatcctt taacactata catcttaccg
     3421 aaggaggaaa aatgaacgca atccgaactt tccaaaaccg cacgcccgaa atccacgaaa
     3481 gctgtatgat agacgaagcg tgcgtcgtca tcggcgaagt gtcgcttgcc gaagacgttt
     3541 ctgtgtggcc gtgcgccgtg ttgcgcggcg atgtgaacag catcaccgtc ggcgcgcgca
     3601 gcaatataca ggacggcagc gtcctgcacg tttcccacaa aaccgccgcc aaacccgaag
     3661 ggtcgccgct ggttatcggc gaagacgtta ccgtggggca caaagtgatg ctgcacggct
     3721 gccgtatcgg caaccgcgtc ctggtcggca tggggacgac ggttctggac gatgccgtga
     3781 ttgaggacga agtgatgatc ggcgcgggca gcctcgtgcc tccgcgcaaa cgtttggagg
     3841 gcggctatct ttatgtcggt tcgccggtca gacaagtgcg cgtgctgacc gatgaggaaa
     3901 aagccttttt gaaatattcc gccgcgcatt atgtgaagct gtcgaaacag tacgggatgt
     3961 gaaatcacat cggcgttcct acgtcagccc caaattcatg cggacgggat gcccgataac
     4021 ggtatccgat gcgccttgat tttgaccggc tgcgtttgag ttgcaggcaa aaatgccgtc
     4081 tgaaagcctt ttttcgggtt cagacggcat tttatcgcct aaagtttgac cgaatgttcg
     4141 cgcgtttcgt ggaacacgat gtctggccaa cgttcttgcg tcaaccccaa attcacgcgg
     4201 ttgggggcga ggtaggcgag gttgccgccc gcgtcgatgg cgaggttgcc cgcgttggct
     4261 ttttcaaatt cagccagctt tttcttgtct tcgcacgata cccagcgcgc cgaccagatg
     4321 gatgcgctgt cgaacacggc ttctacgccg tattcgttgg cgaggcgcga ggttacgact
     4381 tcaaactgca acacgccgac cgcacccaaa atcaaatccg cgccgctcat cggtttgaac
     4441 acctgtaccg caccttcttc gccaagctgt tgcaaacctt tttgcagttg cttgattttc
     4501 agcgggtttt tgatgcgaac gctgcggaac agttcgggcg cgaagaatgg gatgccggta
     4561 aacgtcagtt gttcgccttc ggagaagctg tcgccgattt ggatgttgcc gtggtttggg
     4621 ataccgataa tgtcgccggc gtaggcttct tcaaccagct cgcggtcgtg ggacatgaag
     4681 gttaccacgc tggaggcggc gatttcgcgg ttgatacgca ggtgtttcat tttcatgccg
     4741 cgctcgaatt tgccggagca gacgcgcaag aaggcaatac ggtcgcggtg tttcgggtcc
     4801 atattggctt ggattttgaa gataaatccg gaaaacttcg gctcgtccgg ctcgaccata
     4861 cgcacggtcg catcgcgtgg tttcggcgcg ggcgcccatt caatcaatga attgaggatt
     4921 tcctgaatac cgaagttgtt aatcgcagag ccgaagaata cgggcgtgag ttcgccggcg
     4981 aggaattcgt cgagattgaa ctcgttggaa gccgcctgca ccaattcgat ttcgtcgcgc
     5041 aactgttgga tttccaatgg aaagcgttgt tccaattcgg gattttctat gcctttgatg
     5101 atgtcgaact cgtgcggcag gcgttcgccg cccgcttcaa agagatagat ttcgtcgttc
     5161 aggatgtggt atacgccttt gaagtttttg cccataccga tcggccaggt aacgggcgcg
     5221 cagcggattt gcaggatgtt ttccacttcg tccaagagtt ccagcgaatc gcgcacttcg
     5281 cggtcgtatt tgttcataaa cgtaacaatc ggcgtatcgc gcaggcggca gacgtttaag
     5341 agcttgatgg tttgcgcttc cacgcctttt gccgcgtcga tgaccattaa tgcgctgtcc
     5401 acggcggtta aaacgcggta ggtgtcttcg gagaagtctt ggtgtcccgg cgtgtccaag
     5461 aggttgacgg tgtggtcttt gtagtcgaac tgcatcacgc ttgatgccac ggaaatgccg
     5521 cgctgcttct cgatttccat ccagtcggaa gtggcgaatt tgccggtttt tttgcctttt
     5581 accgtacccg cgctttgaat cgcacctgaa aacagcaaga gtttttcagt caacgtggtt
     5641 ttacctgcgt cagggtggga gatgatggca aacgtgcggc ggcggcgcac ttggtcgagg
     5701 atttcttggg acatggtttt ctttgcaaaa aggttcaggc cgcttttcag acggcccgga
     5761 cagtgtttga gacggcgaaa ttgtacaaaa aaatgcctga taattcaatg ttggaggcgg
     5821 tcagtgcgtg ctgccgtaaa tctctttttc gtctttcagg acggcatcgg cggtttccca
     5881 cgcgctgcca cgccagactt tgtaaaagca gctttctcgc ccggtgtggc aggcgatgcc
     5941 gccgttttgg gcgatgagca tcacaatggc gtcgccgtcg cagtcgaggc gcagttcgcg
     6001 gactttttgc gtgtgtcccg actcttcgcc cttcatccat tgtttttggc gcgaacggct
     6061 gtaatagtgg gcaaagccgg tttcgacggt tttttgcagg gcttcggcgt tcatccacgc
     6121 caccattaaa acacgtttgg tttcggcatc ttgggcgatg gcgcaaacca aacctttttc
     6181 gtcaaatttg acggcttcaa gcaggttttt atccatattt tctttcagac ggcatggtcg
     6241 gggcggtcag aggcgcactt cgatgccggc ttcgcgcata gcgcgtttgg cttcgcggat
     6301 ggcgatttcc ccgaaatgga aaacgccggc ggcaagtacg gcatcggctt tgccttcggt
     6361 tatgccttca atcaggtgcc ggacattgcc gaccccgccg gaggcgatga cggggatgtc
     6421 gacggcttcg gcaacggcgc gggtcagcgg caggttgaaa ccctgtttcg taccgtccct
     6481 gtccataccg gtaagcagga tttcgcccgc gccgcgtttt tgcatttcga tcgcccattc
     6541 caccgcatcc aaaccggtcg gattgcgccc gccgtgggta aagatttccc agcgtgtgtt
     6601 tccggggttg acggctttgg catcgacggc ggcgacgatg gcttgcgaac cgaaaaatcc
     6661 ggcggcttcg tcaatcaggt cgggacgggt aacggcggcg gtgttgatgc taactttgtc
     6721 cgcgccggca ttgagcaggc ggcggatgtc ggcaacggtg cgtacgccgc cgccgacggt
     6781 cagggggatg aagacttgtc cggcaacttc ttcgatgatg tgcaggatgg tgtcgcggtt
     6841 gtcggatgag gcggtgatgt cgaggaaggt caattcgtcc gcgccttcgc cgttgtagcg
     6901 tttggcggct tcgacggggt cgcccgcgtc gcgcaaaccg atgaagttca cgcctttgac
     6961 gacgcgcccg tcttttacgt cgagacaggg gatgatgcgt tttgccagtg ccataatcgg
     7021 atgcctttag tcgagggaat ctgccagttg ctgcgcttgg gcaaaatcga tgctgccctc
     7081 gtaaatcgcg cggccggtaa tcgcgcctgc tacgccatgt ttttcggcgg cacacagggc
     7141 gcggatgtcg tccaagccgg tcagtccgcc ggaggcgatg acgggaatgc ggacggcttg
     7201 ggcgagtttg accgtcgcgt cgatgttcac gccgctcatc ataccgtcgc gcccgatgtc
     7261 ggtgtagatg atgctgttga cgccgtcgtc ttcaaagcgt tttgccaaat caattacatg
     7321 atgcccggtt acggttgccc agccgtcgat ggcggccata ccgtctttgg catccagccc
     7381 gacaataatc ctgccgggga aggctttgca cgcctcgcgc acgaagtcgg ggtttttgac
     7441 cgccgccgtg ccgataatca cgtcgtttaa gcccaaatcc aaatattgtc cgatggtttt
     7501 caaatcgcgt atgccgccgc cgagctgtac ggggatgtct ttggcgacag cggcaaggat
     7561 gtctttgatg gcgggcaaat tttgcggcac gccggcaaac gcgccgttca aatctaccag
     7621 atgcaggcgg cgcgcgcctt gtttgaacca gtgcagcgcg gtttcggcgg gcgaatcgga
     7681 aaagacggtc gcctcttcca tcagcccttg tttcaggcgg acgcagcgtc cttctttcaa
     7741 atcgatggcg ggtatcagca gcatagtttt tctccttgtg cggggccgtg tccggcttac
     7801 cagtttaaaa agtttttcaa catcgtcagc ccggcatcgt ggcttttttc ggtgtgaaat
     7861 tgcgtggcga atacgttgtc tttgccgacg atgcaggcaa acggggacgg gtagtcgctt
     7921 tcgcccaata tggtttcggg attttcgggg gcgaaatagt agctgtggac gaagtaaaaa
     7981 cgcgtgtctt ggggaatatc tttaaacagc gggtggtttt gggtttggcg cacggtgttc
     8041 cagcccatat gcgggacttt cagacggcat ccctgcgggt cgcggaggtc gcgctcaaag
     8101 cgtctgactt tgccgccgaa ccagcccaag ccgtcggtgt ttccttcttc gctgtggtcg
     8161 aataaaagtt gcgcgccgac gcagattccg aaaaagggtt tgttttttaa ggcatctttg
     8221 actgcctcgt ccaggccgcc gcgcgtcagt gccgccatac agtcgggcat cgcgccctgc
     8281 ccgggaaaaa tgactttgtc ggcgcgggac acgcgttcgg ggtcgccgct taaaaagatt
     8341 tcggtatttt ttccggcaag ctgccccgcc gtccggacgg atttcaatac ggaatgcagg
     8401 ttgcccatac cgtaatcgat aatggcggtt tgcatggctt cctcctcttt tttgcaatat
     8461 ggctgcgatt ttaacaaaca aatgtgccgt gctgataaaa atgccgtctg aaaacgggag
     8521 tctgtcttca gacggcatag ggtttaaacc cggaaagccg tttgtcagcc ttccatttgt
     8581 tttgcctgaa cggcagtcag ggcgatggtg aacacgatgt cttccaccag cgcgccgcgc
     8641 gacaggtcgt tgaccggttt gcgcaggcct tgcagcagcg ggccgacgct taagacgttg
     8701 gcactgcgtt ggacggcttt ataggtgcag ttgccggtgt tcaggtcggg gaagaccaaa
     8761 acggttgcct gtcctgccac cgggctgccc ggagctttgg atttgcccac gcccggcacg
     8821 gttgccgcat catattgcag cgggccgtcg atggcgaggt cggggcgttt ttcccgggca
     8881 agtttggttg cttcgatgac ggtatcgaca tcggggccgc tgccggagtt gacggtggag
     8941 taggaaatca tcgccacttt cgggtcgatg ccgaaggctt ttgcggaatc ggcagactgg
     9001 atggcgatgt cggcaagctg ttgcgcggtc gggttcggat taaccgcgca gtcgccgaag
     9061 acgaggactt ggttgggcag cagcataaag aatacgctgg acacgaggct tgcgcccggt
     9121 gcggttttaa tcagttgcaa agcggggcgg atggtgttgg cggtggtgtg aaccgcaccg
     9181 gataccaaac cgtccacatc attttgcgcc atcatcatcg taccgagtac cacggtgtct
     9241 tgcagttgct tgcgcgcgtc ttcgggtgtc aggcctttgg atttgcgcag ttcgcacatc
     9301 ggtccgacgt attgttcgac caatgaggcg ggatcgatga tttccaaaga gtcgggcagg
     9361 ctgataccgc gttctttggc aacggcttcg acttcttcgc gtttggcaag caggacgcag
     9421 cgggcaatgc ctttttcgtg gcagatggcg gcggcttgga cggtgcgggg ttctgcgcct
     9481 tcaggcagga cgatgcgttt gtcggcttgg cgggcgaagt cgatcaggtt gtagcggaat
     9541 tgcgccggcg acaggcgttt tgcttcgcgg cctgccaata cggatacgtc tttcagcgcg
     9601 tcgctcgaac cgaagaaggt caggccggtt ttttcggctg ccgcttcggc aacggaggct
     9661 gccgcgccgt ccacgacaaa accttccaat acgcccggcg cggcggcgaa gaactgtttg
     9721 gcaaggttca cccgatttgc cagttcgtcg gcatcggcgt tgtcggaacg gacggcgaag
     9781 acggctgccg cgtcaaggga caatgccagt tcgacgtttt tgcctgcgag gtagattttg
     9841 tcggcatcgg gcgcgaagcc ttcgatgacg aggttggcag catcgagtgc ggcaactttg
     9901 ccgaccagtg cgtcgaacca gtcgtcgctt ttgccttgcg cgagcagggt ttcggcggtt
     9961 gcgtcaacgg cttggaaaat ttgtgcgtcc agtgcttttg caaaggcttg tgcggcggcg
    10021 gaggcgtcca gtccggcaga tacgggtacg atgagtactt ttgccatgat atatcctttc
    10081 gtatgctgcg gtgtgcggca tatgtggttg gaaggggcgg catataggca gaaacggctg
    10141 cctgcgtgcc gtgcgtgccg tgtttggctt gaggcgcgca ggttgaatat agcaaacaaa
    10201 ttctgtttcc aacaagataa atatccgcag gcttgtggat gctgccgcct ttcagagggt
    10261 atttccgggg aagaacaggg cgggaccgtc caaatggagg acggcggaaa tgccgtctga
    10321 cagggtaggg gcggcgggga ggttgagcgt gaggacggtt tgtccggccc ggaggctgat
    10381 ttcggtgtgc cgtgctttgg gcgtggtttt gagaaccacg gcgtgaatgg cggcggcggg
    10441 tgcggaatgg gggtaaaggc tgaactgttc cggacggatg agcagtgtgc cgcgcgtgcc
    10501 tgcgggtgcg gcgctttgga cgggcaggcg gcccaatccg caatcggcgg tgccgtcggc
    10561 gttgagcgcg gcggggaaca cgatgccttc gccgataaac agggcggcat caaggtcggc
    10621 aggttgtcgg tacaattcgt gagggcttgc agtttggagg atgcgcccct gtttcatcac
    10681 ggcaatccgg tcggcgtatt gcagggcttc ttcgcggtcg tggctgacga aaacggcaga
    10741 tttgccgttg gcgcgcaggg cggcaatcat gtcttcgcga atctggcggc gcaactgttc
    10801 gtccagcgcg ctgaagggtt cgtccaacaa aatcagttcg ggatcgggtg cgagggcgcg
    10861 ggcgagggcg acgcgctgtt gctgtccgcc cgaaagttcg tgcggatagc gtccggcaag
    10921 ttcggaaatg ccggtcaatt ccaacatagc ttcgatgcgc tgccgctctt gcgccgtctt
    10981 gcctttgccg ttgcccagcc cgtaggcggt gttgcggtaa acggtcaggt gggggaacag
    11041 cacaccttcc tgtacgacat aacccaaacg gcgttcgcgg acggggaggt tggtattttt
    11101 cgagaagatg gttctgccgg aaagcgaaat ttcgccaaaa tcgggttgtt caaaaccggc
    11161 aaggcagcgt aaaagggtgg ttttgccgca gccggacgcg ccgacgataa agaggatttc
    11221 gcccgggtcg aggctgagcg aaatgtcgtt taaaactggg gtgttttgaa aacttttgga
    11281 caggtgtccg atgtgcaggg cggcggtcat ggcggtactt cctcaagctg ttatttgaag
    11341 gcgtatttct tcagcaggaa tacggggatg ccggaaaata ataccagcat cagcgcgtaa
    11401 ggggtggcgg cggcgtattg tgcgtccgat gtgtattccc aaacggcggt ggagagtgtg
    11461 tggacatcgt cggtggtcag cagcagggtg gcggtcagct ctttcatcag tttgaggaag
    11521 acgagtgcga atgcggcggt aatgccgggc aggatggacg gcagtaccaa cgtcctgaaa
    11581 ataaagaagt gtccgcgccc caatgttgcg ccgacctgtt ccatcccttt tgggagttgt
    11641 tccaaggaag tcctcagggt ggtttgcgcc atcggcaggt aaagcatgaa ataggcaagg
    11701 atgacgacga taaaggtttg gtaaacggca ggggtgtagt tgatgctgaa ataaaccaag
    11761 gatagggcga taaccaaacc ggggacggcg tgcagtaaaa acggcagcct gtctatccaa
    11821 acggttaaaa aattgcgata gcgaaccgat gcccaaacaa ggggcaaggc acataatata
    11881 gtcaaaatcg cacctaaagc cgatacgctt aaggaacgga taaaggcatc aaatacggat
    11941 acgagcgcga atgtgccgga agtgccgacc atcatccaat gtatcaatac gccaaagggg
    12001 ataataatgc ccaaagtcaa caagctgctt aaaaaaacaa tcgcgccaat ctgaccgggc
    12061 agtttgaggg ttttgacggg ataaggacgg gcaacgcctt tgccgctgtg gtaaatcttg
    12121 gctttgccgc gaaatatgct ttctccaaat acgacgatgc cgcacaccgc cattaaaaca
    12181 gcggaaagca gggcggcggt attgttgttg taggacattt cgtattcttg gaaaatggcg
    12241 gtggtaaaag tggggtagtt caaaatagat accgcgccaa attcgaccag catatgcagg
    12301 gcaatcagta acacgctgct gccgatggcg ggtttgagct gggggaggat ggcggaaaaa
    12361 aaggtttgca ggcggctttt gcccaaggac aggctgactt cttcgtaaga caggctgatg
    12421 cgtttgagtg ccgcctcgac gggcaggtag gcgagcggga acgaggacag gctcataatc
    12481 atcactgtcc cccaaaagcc ttcgacacgg aaggtcaggc tgatccaggt gaaacagctg
    12541 acaaatgcgg ggatgcacaa aggcagggtg attgccgtct gaaaaaaggt tttgccgaag
    12601 aagcggtaac gttggaacaa aagggcgcag gcaatgccca aaacaatgga aatcagggta
    12661 acgcccgcca tcatcgtcaa ggtgttggag agcaaatccc acatacgcgg gcggaacaac
    12721 agttcgacgg cgcggttgat gccgacctgc cacgaacgca tagcgacata taaaaaaggc
    12781 agggtaagcg gtagggcaat cagtaggatg aggccggtaa gccaaatggg tattttttta
    12841 ggagacatag tgttttttat cggcaaaacg ggcggacagt ataaatgtcc acccgtttga
    12901 caatccgaaa acggcttatt tcataccggc ttgctcaagc agccgggtgg cgtgttcttt
    12961 ttcggaaaca gtggtggcgg acacttgggg tgcttccaac ttggcgatgg gttccaaatt
    13021 gaaagtggat accacgtgcg gattcaaagg atattcggca cggacggcgg tcagggcgcg
    13081 ctgtccttcc ttgctggcga ggaaggcgac gaattttttc gcctcatcct tgttttggga
    13141 ggattttaac acggctgcgc cggaataggt aacgagtgcg ccgggatctc tgtggcggac
    13201 gaaattcagg cgggtgtgga cattttgtac gcctttttca cgcgcaaaag cgtgccagta
    13261 gtagttgttg atgagggcgg catcgatttc gccgttttca accgcttgaa gggcgacgga
    13321 gtttttagcg taaggcttgc cgtattcttt cagacctttg agccatttca atgcggccgc
    13381 ttcgcctttc agtttgacga tggcgacaac ctgttccaag aacgcgccgg aagtgggggc
    13441 gtaaccgatg cggtttttcc atttcggcgt ggcgtaattc aggacggatt tttccaaatc
    13501 tttttcagac agtttgcggg tgtcgtaaac gacgacgcgc gaacgtccgc tcagtgccac
    13561 ccagtctttt ttggcggcaa ccggcacgcc cttgccgcgt gtttcgttga tggtggaggc
    13621 gggcaggggc tctaggaggt tggctgcgga aagggtggcg agtgccggga tttgttcgga
    13681 atagaatacg tcggcggggc ttcggctgcc ttcttctttg atttgaccgg caagctggtc
    13741 gcctttggcg ctgttgagtt tgactttgat gccggtagcc cgggtaaagg catctgcaac
    13801 ggcttgtgcc gcttctttgt gttggccgtt gtacacggta atgtctgcca gcgcgggggt
    13861 tgcggcggtc agggctgcgg caagcagtgc gtatcggata gatgttttca tatcgatttt
    13921 ctcctaatga atgagagtgt acaccttgtt aagacataac ggggtgtagt gtattccttc
    13981 ttctttataa atgcaaataa ttatttttta aatttgttat tatccgatcc ggttattgtt
    14041 tgttctggct tgtatttttt tccgtgcatc gcgcccgtaa ggcggaagcg gagggtaatg
    14101 tgtggcggaa tgtgggtaaa ggcggcatct tgatttgccg gaatacttga gaacccttcc
    14161 ctttaaaacg ctgtctgaac agggttgccg gaatagtatt gccatcccag cagatacagt
    14221 ttgtcggggt cttgccaata ttgttcatcc agactgttca gcagtgagac ggttttgttg
    14281 tcgagatgtt gcgttatatc ccacatttct tttaggtttt tgccttccga ttggaggtgg
    14341 cggatttctt tgtccaatgt gtctgccgcc cgatggatca gcattgcgct gtgtatcgcg
    14401 ccgatttttt tcagaacgga acaagtcttt tcggcggcgg ggaaactcca gttgcagaca
    14461 aattgcagta tgccgccgtt gccgatatcg gcttctgccc gccaaattaa aaccagctcc
    14521 tgttcccacc cgtccatgct ttcgagtttg ccgtcatgct gttcaaaaag tttgtccacc
    14581 gcctgccaca tcatctgttc gaagcggtcg gcttgggtat ccgtatcggt catagtgttc
    14641 ttgtctttta aaaatgccgt ctgaacattt cttcagacgg catcgggggt taagctgaca
    14701 tttcccgcca gcgtttgact tggaaacgga cttgttcagg cgcggtaccg cccaagtggt
    14761 tgcgcgcgtt taagctgcct tcgggtgtca gcacgccgta aacgtcgtcg gcaatcaaat
    14821 cgctgaaacc ttgtaagact tcgagcggca gtttgctcaa atcgacaccc gcttggtcgg
    14881 cgtggcgcac ggcttgggcg acgacttcgt gggcatcgcg gaaaggcatg ccttttttta
    14941 ccaagtaatc tgccaaatcg gtggcggtag cgaagccctg catcacggcg gcgcgcatat
    15001 tgtcgggttt gacggttacg ccgcgcatca tatcggcgta aatccgcaac gtgtcgataa
    15061 gcgtgtcggc ggtgtcgaac aagggttctt tgtcttcctg attgtctttg ttgtacgcca
    15121 agggctgcga tttcatcagg gtaatcaagc cgataaggtg tccgatgact cggccggatt
    15181 tgccgcgcac gagttcgggc acgtcggggt ttttcttctg cggcatgatg gacgaacctg
    15241 tgcagaaacg gtcggcgatg tcgataaagc cgaaacgcgg actcatccac aaaatcaatt
    15301 cttcagacag gcggctcagg tgaaccataa ccagcgaggc ggcggcggtg aactcgatgg
    15361 caaaatcgcg gtcggatacg gcatcgagcg agttttggca gatttgttca aagcccaaca
    15421 gtttggcggt gatttcgcgc cgaatcggat aagtcgtacc ggcaagggcg gctgcgccga
    15481 gcggcatacg gttgacgcgg cggcggcagt ccgccatccg ttcgttatcg cgtccgagca
    15541 tttcgacgta ggcgagcata tggtgtccga agctgacggg ctgggcgact tgcaggtggg
    15601 taaagcctgg catgacggtt tcggcgtttt gttccgccaa atccagcaat gccgtctgaa
    15661 ggctttgaat caggcttcgg atgacggtaa tctggtcgcg cagccaaagg cggatgtcgg
    15721 tggcgacttg gtcgttgcgg ctgcggccgg tgtgcaggcg tttgcccgcg tcgccgattt
    15781 tgtcggtcag gcggcgttcg atgttcatgt ggacatcttc caaatcggac gaccattcga
    15841 ttttgccgct gcggatttct tcgaggattt ccgccatgcc ccgacggatg tccgccaaat
    15901 cgccttcgtc caacacgccg gtttctttca acatttgcgc gtgtgccagc gagccttgaa
    15961 tgtcccattc ggcaagccgt cggtcgaaac cgatggaggc ggtgtattgt ttgacgagtt
    16021 cggaaacggg ttcgttgaaa cgtccggacc aggttttgtc gtgcataagg attccttgat
    16081 ggggttattc ggtgcggtat ttttccaaaa ggcggcggaa gggttcgccg gtttcggggt
    16141 gtttcaggcc gtaggcgacg gtggcttcga ggtagcccag tttgctgccg cagtcgtagc
    16201 gcgtgccttc aaaggggtgc gccaggacaa attcgtgatc gagcagcttg gcgatgccgt
    16261 ctgtaagctg gatttcgttg cccgcgccgc gcggcagtcc ggtcagtaag tcgaaaatgc
    16321 gcggggtaag gatgtagcgt ccgacgacgg caaggttgga gggcgcgtct tcgggcttgg
    16381 gtttttcgac aatgccgata atgcgttgga actgtttgag ctgttcggtt tcgacgatgc
    16441 cgtatgagcc ggtttgcgat gcttcaacgg tttctacgcc caaaatgctg ttgccgctgc
    16501 gcccgtacac ttcgaccatt tgtttgagcg cgcctttggg ggcatcaatc aggtcgtcgg
    16561 caaggataac ggcaaagggt tcgtctccga tggcggcgcg ggcgcacaag acggcgtgtc
    16621 ccaagcccag tgcttccgcc tgacggatgt agaggcaggt aatgttcggc ggcaggatgt
    16681 tgcggacgtg ttccaacaat ttgtctttat ggcgcatttc caactcggtt tcgagttcgt
    16741 atgccttgtc gaaatggtct tcgatgctgc gtttgttgcg tccggtaaca aacaccattt
    16801 ccgtgcagcc ggcttccacg gcttcttcta cggcgtattg gatcagcggc ttgtcgacga
    16861 tgggcagcat ttctttcggg cttgccttgg tggcgggcag gaagcgtgtt cccatccctg
    16921 cgacggggaa aacggctttc cgtatgggtt tcattctttt tcctttgtat tgttttgatg
    16981 tttaaagggc gagtttgcgt aagagttcgg caagtgcctg cgcgcggtgg ctttcgcggt
    17041 ttttgacctc cgaatccaat tcggcggcgg ttttgccgtg tccgggcaga taaaaatacg
    17101 ggtcgtaacc gaaaccgttt tcaccggcgg gaacgccgtt ccattgtccg tgccatacgc
    17161 cttcggcaat aatcggacgc gggtcgtctt tatggcggac aaaaaccaat acgcagacgt
    17221 agcaacagct tttgtcggct ttgccggcaa gttcggcggc aagtttcagg ttgttggcgg
    17281 tatcggattt gggattgctg ccggcgtaac gtgcggaatg tatgcccgga gcaccgttta
    17341 aggcggcggc acagatgccg ctgtcgtcgg cgagtgcggg cagcccgctg tgtccggcgg
    17401 cgtgccgggc ttttgccagc gcattttcaa caaaggtgga atagggttcg gggcattcgg
    17461 gtatgctgaa ctcggattgc ggcaatacgg taatgccgta tggttcgaat aggttgccga
    17521 attctttgag tttgcctgca ttgccgcttg ccaaaacgat tttttccggt ttttcagaca
    17581 tagcggtttt cctttgcggc ggattgggcg gcgcgtaggg atttgtgccg caggtagagg
    17641 gcgaggctgc cgatttgtcc gaacagtgcg ccgaatgcga aaagaaagga ggcgacggcg
    17701 aaggctttgc tgccgacggt cagcagataa gcacccaaga ggacgagcag cataaatgcc
    17761 agtgtgaaga gggcaacaga caacagatag atttttcggc ggttcatggc gttcggtcgg
    17821 aaacggtatg ttcggattat agccgattgg gacggtattc cctagagctt ggaaaaatgc
    17881 cgtctgaaac ggcgttcaga cggcatggcg ggcgttatgc ctgtttgttc caacgttcga
    17941 tggattcttt gatgactttt ttcgcttctt ccgcatcgcc ccacgattcg actttggtcg
    18001 tacctgcttt tttcaggtct ttgtaatggt tgaagtggaa ctcgatttgt ttgatgagct
    18061 gttgcggcaa atcggacaaa gttttgtagg cgttgccgtt gttgcggtcg tcggcaggaa
    18121 cgcagacgat tttgtcgtct acttcgccgt cgtcaacgaa tttcatcacg ccgataacgc
    18181 gcgcttccaa gaatacgccg gttgccaaag gttgttcggt aacgagcagc acgtccaatt
    18241 cgtcgccgtc ttcgtccaaa gtttggggaa tgaagccgta gttggtcggt ttggcgaaga
    18301 tggcgggttc gacgcggtcg agttggaatg cggcgagttt gcggttccac tcgattttgt
    18361 ggttgctgcc ggcggggatt tcgttgacga cgttgatgat gccgccgtcc acatcgccgg
    18421 gggtcaggat ttggttgaag tctgccattt ggtttccttt gtttgggaaa gtttgaagtt
    18481 tgaaagtata gcacaaacgt ccggctgaaa atgcgcccga tgccgtctga aagggtgtac
    18541 gggcgcgtgt taccgtttgc ccaaaaacct gcccagttcc agaatcgcgc gcctgttgga
    18601 cggggaaaac actttttccg ccgcttcttc caagccgaac cagccgtagg agacgtgttc
    18661 ctcgggttgc aggacgacgg gcgtatcacg cgggatttcg gcagagaaga ggtgttcgcg
    18721 gttttcaaac acgccttttg gatagcggtg ccgccagtgg tggtagattt cgtaaaccgt
    18781 gctgtcgtgc cagtcttgaa gctgcccgtc cgccagcagg atgccggttt cttcccaaac
    18841 ttcgcgcctt gccgtttgtg cgacggtttc gcccggttcg aggctgccgg ttaccgactg
    18901 ccaaaatcct tccggatgcg tgcgttcgat gagcaggatg ccgccgtccc cgctataaag
    18961 gacgaccagt gcggaaacgg ggtatttgag cggttttgcc atcggcatct ttcggcgggc
    19021 tgcggtaatg aaggggcgga ttatagcaaa cgccgcacgt tatggcgttt atccttttcc
    19081 gtatcctttt ttctgcacgg atgggacgcg ccggtgtttg ccggtaaatt ttccgttgtg
    19141 tcaaaaagat aagggcggtt gtgattttaa tgcttgccaa agcgtcgggc ggaaactata
    19201 atccgcaact tatcgagtcg gagtgtggcg cagtctggta gcgcacttgc atggggtgca
    19261 aggggtcgaa ggttcgaatc ctttcactcc gaccaaaaat tccgaaagcc gctttcaaaa
    19321 gcggcttttt tgccgtccgt atgattatga tgtagagtac gcggcgacag acattcaaat
    19381 gccgtctgaa aaccgttcag atggcatctc tttatcttag tttcattccg taccatctta
    19441 aggaacatca aattgggcat ttcccgcaaa atatccctta ttctgtccat actggcagtg
    19501 tgcctgccga tgcatgcaca cgcctcagat ttggcaaacg attcttttat ccggcaggtt
    19561 ctcgaccgtc agcatttcga acccgacggg aaataccacc tattcggcag caggggggaa
    19621 cttgccgagc gcagcggcca tatcggattg ggaaacatac aaagccatca gttgggcaac
    19681 ctgatgattc aacaggcggc cattaaagga aatatcggct acattgtccg cttttccgat
    19741 cacgggcacg aagtccattc ccccttcgac aaccatgcct cacattccga ttctgatgaa
    19801 gccggtagtc ccgttgacgg attcagcctt taccgcatcc attgggacgg atacgaacac
    19861 catcccgccg acggctatga cgggccacag ggcggcggct atcccgctcc caaaggcgcg
    19921 agggatatat acagctacga cataaaaggc gttgcccaaa atatccgcct caacctgacc
    19981 gacaaccgca gcaccggaca acggcttgtc gaccgtttcc acaataccgg tagtatgctg
    20041 acgcaaggag taggcgacgg attcaaacgc gccacccgat acagccccga gctggacaga
    20101 tcgggcaatg ccgccgaagc tttcaacggc actgcagata tcgtcaaaaa catcatcggc
    20161 gcggcaggag aaattgttgg cgcaggcgat gccgtgcagg gtataagcga aggctcaaac
    20221 attgctgtta tgcacggctt gggtctgctt tccaccgaaa acaagatggc gcgcatcaac
    20281 gatttggccg atatggcgca actcaaagac tatgccgcag cagccatccg cgattgggca
    20341 gtccaaaacc ccaatgccgc acaaggcata gaagccgtca gcaatatctt tacggcagtc
    20401 atccccgtca aagggattgg agctgttcgg ggaaaatacg gcttgggcgg catcacggca
    20461 catcctatca agcggtcgca gatgggcgcg atcgcattgc cgaaagggaa atccgccgtc
    20521 agcgacaatt ttgccgatgc ggcatacgcc aaatacccgt ccccttacca ttcccgaaat
    20581 atccgttcaa acttggagca gcgttacggc aaagaaaaca tcacctcctc aaccgtgccg
    20641 ccgtcaaacg gaaagaatgt gaaactggca aacaaacgcc acccgaagac caaagtgccg
    20701 tttgacggta aagggtttcc gaattttgaa aaagacgtaa aatacgatac gagaattaat
    20761 accgctgtac cacaagtgaa tcctatagat gaacccgtct ttaatcctaa aggttctgtc
    20821 ggatcggctc attcttggtc tataactgcc agaattcaat acgcaaaatt accaaggcaa
    20881 ggtagaatca gatatatccc acctaaaaat tactctcctt cagcaccgct accaaaagga
    20941 cctaataatg gatatagtgc cgggaattta agcaaaaaag tcctgacttt agtttacata
    21001 aacggcaaac tcaaattcgg gccaagcagt ctgccgtctt cggcattgaa agcacctgtt
    21061 cccattgtcg gcaaggctga ggctccgccc ggaaaagctg tgcctgtcgg cgaagcccgc
    21121 attccttcaa atccaaaagc ggtaaaagga acaaccgtta ccctgtcgca ggaacaacgc
    21181 ctagccaacg gagagctgat accgaaaggc tctgtggtaa cgtggtcgga caatgcggtg
    21241 aaggttgtgc ggcctgatgg gaaaaagcgg agatttaata gtcgggattg ggaacagaag
    21301 gcattgccga aaccgcaact accgaaagat tacagagatg acatcaacat aggtggaaat
    21361 aatcctagat ttaatcagca acggcatgaa aaaatcgaat cccacaaccc aaacagaata
    21421 gaggagatac gccaacgtaa tgccgtttct tctgcagaaa ggcaggctga tgcattaaaa
    21481 aggatgcaaa cgtctggccg cacccgcctg cctgggcagc cacaaaaagg aaaacccggc
    21541 gctgctagag aaatgtcctc ttcagacaat ccgaatcaaa cagccgaggc ttttgcacgt
    21601 cgatatttag gcaggaaacc tacactaatg gaacgagtcg aaggtgaaaa attatacgga
    21661 ggtaaatgtg tgggctgttg gaaagcgcaa atgccggacg gaacctttgt ggtgtatagg
    21721 ccagcaggta atgcttctat gaccaaggga actactgcgt ctgttgatat taataaccca
    21781 acattaaata acttaaatat taatttaaaa ggcaagccaa cagagttaaa atttaaattc
    21841 cctgctagat aaggatgttt taatgaattt agagacagca gaaaatattc aatgcgaatt
    21901 tgagtattta gcattagatg gttattttcc aatgcatttt gcatcgcatg gtcaaggaaa
    21961 caaagattgg caatttgcag ttgaattcat atatagatta ttaatatgtc aattagcaac
    22021 tcttgaacct atcaactttg aaacgaaaaa tgatatttta gacttttgcc ataatttagc
    22081 aaaacaaagt ccttttaata atgataatga ggtgtggtat cagggggaaa ttgtattaac
    22141 aaaaaaaggg atagatttaa taaaggaata tattccagag gcgtttgaag agtggaatgg
    22201 aaagaaattt gaattaaaca ttcctttcat taaaacatta aaaaatatat ttgttaatta
    22261 tgaggtagca tgggatgaga ataatccact attccccatt atatctttaa acctcggcac
    22321 ctgataaaca tggggtttat caagcgacag tggaaattaa aaagcctgat ggaagttggg
    22381 aaatgaaaaa aggaaggggc ggaaaaccta tgacaaatca ttctatgttc ccaaaagatt
    22441 gggatgaggc tagaattagg gctgaagtta cttcggcttg ggagaaaaga aaggaattag
    22501 aaggtcaaaa atggagaggt acaagtaaat ctggtgttga aatagaagga tttacggaac
    22561 ctaatcgaac agcttatcca ctttataata gtaaatgaag tattgattaa aaaggtgttt
    22621 ttaaatgtat aaaataaaat gtttttatga tcagtttagt tctggtgaat tatttaacta
    22681 ctgccagttt ttagataatt cttctaatca aaagataaat acacgaggaa cggtgtatca
    22741 atatattatt tatgttttaa caggagacct ttatctacaa aaagacatag atgaaaattt
    22801 agaatttatc catcaagcag aaaataatcc caatgaagtt tattcaggag gtggacaagg
    22861 tttttgctgg gatatttctg ctgaaaaagt agttttctat cacaacgaat ttgatgaaga
    22921 agacggctgg cctgatttaa gctgttcgct gcatactttt aaaactgctt taattgcttg
    22981 gaatgctttt ttgcaattgc ctaaaagtat tcattcggtg gtggagactg tgattgagga
    23041 ataagcataa ttagcttaat gaatagaatc agcgatatag attggactgc aaatccacgc
    23101 ttatacgctg tgccatgatt aacaggaaga gagcaacttg gatgggctag tagggatggt
    23161 aagcatttaa atatatcaat tgatggaaag attacacaca aatgactaat ttaaaattag
    23221 atttctactc tgaagttatt ataaaagatt cttgccctaa tgatttgtta gaaaatggtg
    23281 agactattaa aggaaaaaaa ggagtggtat taggtataag cgaagaagat ggtataatct
    23341 atggctatac tattttactt tttgatataa aatattgtat atatatagat aagaaatata
    23401 ttataccgac tggaaaaaaa ttctctcgcg atgattttta ttagctaatt taagtaattt
    23461 aagcaagttt tttagatact gaaactggta attatgttta tgtaagcata aggagttcag
    23521 attgaaggat tctacagggc aaatgaggct ggcaaccaag gatttggcgg aagccattaa
    23581 acgaggagaa gtacgtagtt ctgcttttac aacaaagcaa ctaaaggcaa ttgaaaaagg
    23641 caaagacaaa atccctagct acacttggca tcatcatcaa gacactggaa ggatgcaatt
    23701 gattaatgaa gacttgcatc atgataccgg ccatatcggt tggagagcga tgagtaaagg
    23761 aaagtaacta tgtggaaaat cataaaagag gatagtgatg atttaggatt tgcaattaaa
    23821 tgcttattct ctcagtctat tgatttaaat gaattcaagt tatggattga acaagtaata
    23881 cgcgatatgc ccatcgagga catccctttt tatatttttg acttggcgga ttttgatggg
    23941 ggaattgccg atattgacaa tattgtaggt tttgtttcga gttacagcct atcaaaatcg
    24001 aaaaaaaatg ccttgacagg cattgccttc ttaaggggga tagatgtcta tgatccgcct
    24061 atttcaaaag aaaaagcatt aaaagcctta aagaaacatc ctgaaattta tcagaagttt
    24121 cagcatttct ttccgtttgt agaactgccc ccgctttaaa cagtcaaaat gccgtctgaa
    24181 atgatattcg gctttcagac ggcatttttg acacaaagca ggtaaccaaa agagcgtttg
    24241 acggcaaagg aagataatta tgtgaaaaat tacgaaagag caaggtcaag atttaagttt
    24301 tgcaacatat tgcttattat cggcagcaat taatttgcaa gaatttaaat tatggttgga
    24361 gaaggttgtc ttagatatgc ctattgataa tatacctttt tatatttttg atttaattga
    24421 tcttaaagaa ggagtaggag atatttataa tattttggat tttgttccga attcagactt
    24481 atctaaagac caagatgacg cattaacagg cattgccttc ttaaggggga tagatgtcta
    24541 tgaccctccc gtttcaaaag aaaaagcatt aaaagcctta aagaaacatc ctgaaattta
    24601 tcagaggttt cagcatttct ttccgtttgt agaactgccc ccgctttaaa cagtcaaaat
    24661 accgtctgaa agccatttcc gccgctcaga cggcattttc gccccttt
//
LOCUS       DAWEYF010000008        24083 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.008, whole genome shotgun sequence.
ACCESSION   DAWEYF010000008 DAWEYF010000000
VERSION     DAWEYF010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24083
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.008"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(431..2272)
                     /locus_tag="WGN93_000251"
     CDS             complement(431..2272)
                     /locus_tag="WGN93_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ0226220.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGVLPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFVLGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANMP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            2363..2833
                     /locus_tag="WGN93_000252"
     CDS             2363..2833
                     /locus_tag="WGN93_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ0226221.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAENQARLNPHEIA"
     gene            complement(2905..3717)
                     /gene="hpnC"
                     /locus_tag="WGN93_000253"
     CDS             complement(2905..3717)
                     /gene="hpnC"
                     /locus_tag="WGN93_000253"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ0226222.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKKALWK"
     gene            complement(3804..4286)
                     /locus_tag="WGN93_000254"
     CDS             complement(3804..4286)
                     /locus_tag="WGN93_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ0226223.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDSELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            4759..5025
                     /locus_tag="WGN93_000255"
     CDS             4759..5025
                     /locus_tag="WGN93_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226224.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPAAEAPAA
                     EAPATEAPAAEAPAAEAAATEAPAAEAAASEAPAAEAPAAEAAK"
     gene            5135..6502
                     /locus_tag="WGN93_000256"
     CDS             5135..6502
                     /locus_tag="WGN93_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ0226225.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYKHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELVGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(6683..8711)
                     /locus_tag="WGN93_000257"
                     /pseudo
     CDS             complement(6683..8711)
                     /locus_tag="WGN93_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(9084..9530)
                     /gene="smpB"
                     /locus_tag="WGN93_000258"
     CDS             complement(9084..9530)
                     /gene="smpB"
                     /locus_tag="WGN93_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ0226226.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(9585..10595)
                     /gene="waaF"
                     /locus_tag="WGN93_000259"
     CDS             complement(9585..10595)
                     /gene="waaF"
                     /locus_tag="WGN93_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ0226227.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAIIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHQSQEDFDGCSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINRLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(10726..10801)
                     /locus_tag="WGN93_000260"
     tRNA            complement(10726..10801)
                     /locus_tag="WGN93_000260"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10766..10768),aa:Asn,seq:gtt)
     gene            complement(10992..11744)
                     /locus_tag="WGN93_000261"
     CDS             complement(10992..11744)
                     /locus_tag="WGN93_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ0226228.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETRVCECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVLIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            12055..12579
                     /locus_tag="WGN93_000262"
     CDS             12055..12579
                     /locus_tag="WGN93_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ0226229.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNASPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVHRRN
                     ATSLQLSRCANIADDQSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSATSA
                     ALCGTSSSVSTAAA"
     gene            complement(12668..12947)
                     /locus_tag="WGN93_000263"
                     /pseudo
     CDS             complement(12668..12947)
                     /locus_tag="WGN93_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246300.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(13318..14463)
                     /gene="dapE"
                     /locus_tag="WGN93_000264"
     CDS             complement(13318..14463)
                     /gene="dapE"
                     /locus_tag="WGN93_000264"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ0226230.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADM
                     KTGIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGRQGHIAYPHLAVNPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTNVARAAIVETCGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLEDIPKLSAVYEGILARLLAGNAV"
     gene            complement(14563..15183)
                     /locus_tag="WGN93_000265"
     CDS             complement(14563..15183)
                     /locus_tag="WGN93_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ0226231.1"
                     /translation="MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGKQDVVKWIAETVEDLLPLYEACHGA"
     gene            complement(15217..15726)
                     /locus_tag="WGN93_000266"
     CDS             complement(15217..15726)
                     /locus_tag="WGN93_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ0226232.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLYGN
                     WDAVAAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIG
                     EIMAARRRR"
     gene            complement(15819..16385)
                     /gene="azu"
                     /locus_tag="WGN93_000267"
     CDS             complement(15819..16385)
                     /gene="azu"
                     /locus_tag="WGN93_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ0226233.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPK
                     ASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPA
                     KLADGDYKFACTFPGHGALMNGKITLVD"
     gene            complement(16666..17088)
                     /locus_tag="WGN93_000268"
     CDS             complement(16666..17088)
                     /locus_tag="WGN93_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ0226234.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            17219..19969
                     /gene="secA"
                     /locus_tag="WGN93_000269"
     CDS             17219..19969
                     /gene="secA"
                     /locus_tag="WGN93_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ0226235.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALEDGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMKEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            19984..20136
                     /locus_tag="WGN93_000270"
     CDS             19984..20136
                     /locus_tag="WGN93_000270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226236.1"
                     /translation="MPSEHPAPVSDGILPEPPHPTAIPKNPDFVPSVPKTDIPSAPHH
                     DSIRLH"
     gene            20114..21886
                     /locus_tag="WGN93_000271"
     CDS             20114..21886
                     /locus_tag="WGN93_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ0226237.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            22073..24001
                     /gene="rpoD"
                     /locus_tag="WGN93_000272"
     CDS             22073..24001
                     /gene="rpoD"
                     /locus_tag="WGN93_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ0226238.1"
                     /translation="MSRNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         6219 a         6721 c         5597 g         5546 t
ORIGIN      
        1 aatcggttcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta
       61 atccactata tccgactttc catacttaaa cagcactgcc tcttttcaga cattgacggt
      121 tgcagccgcc cacctgaacc ttaatgattg actatttttt aatcatgtta ttattttcca
      181 taaaatacat gacattaaga tgtttttcca caaaagatac acacaccggc aaacaccggc
      241 tgtgtttatc ttttcttatg cctatttttt aatcatcgta tttttatctt ttaatttcaa
      301 tacgcaaact aacttataca cacggttttc acatctttgg actgcttccg tgtgtatagt
      361 ggatattgcc gttttccttt ctgacaaaaa tgccgtctga gaacttcaga cggcatttga
      421 aacatcggaa tcagcggttt tgttcatacc actcgataaa cttgtctgct ttgacaaaac
      481 ccagcagcgg ctcgctgcgg ctgccgtcgg agcggacgac aaacacgccc ggcggcccga
      541 acagaccgta ttctttcaac aacgcctgat gttcgggcat gttggcggtt acatcgattt
      601 ggaaaaagcg ttccatatcg actgcctgat gcacttccgg ctgattgagc gtgtaagccg
      661 ccatttcttt gcaggaaatg caccagtcgg cataaaaatc caaaacgacg ggtttgtcgg
      721 gatgttcttt caacgccgta tccatcgctg ccttcagcgc ggcagtatcg gcaaacattt
      781 ttccgtgttc cgaagatttg cctgcttcag ccggcggatt gagggtcagg aaatggtgca
      841 gcgcggtcgt tttgccgttt gcgccctgcc agccgaacca cgcgccgcct atcagcaata
      901 tgccgcccaa tacgaatgcc acagctttcg gacggcgttt ctgcctgcgt ccgttgacca
      961 gcagcataca ggcaggaacc agcatcagca gcgtgtacag cgcgacgacg agataatagg
     1021 gcaagtgcgg cgtggcgagg taaacggcga cggcaagcag gataaagccg aaagcgtatt
     1081 tgacggcatt catccaatcg cctgccttag gcaggatatg cccgccgaac gtgccgatgg
     1141 caatcagcgg aacgccggtg cccaacgcca aagtgtaaag tgccaaaccg cctaaaaccg
     1201 catcgcccgt ctgaccgatg tagcccaaag caaatgccag cggcggggcg acgcacggcc
     1261 cgacaatcag cgcggacaat atgcccataa taaagacgga aacgatttta ccgcctgaaa
     1321 gcctgctgct ttgattctga aaatacgact gcacggcgtt gggaagctgg atgttgaaca
     1381 gcccgaacat agacagtgcc aagacgacca ttaaagccga tgccgccaac accacccaag
     1441 cctgctgcaa ccatacggtc agcagtgcgc ccgtcagtcc ggcaacaatg ccgaccagcg
     1501 tataagtcag agccaaaccc tgaacataaa cgacggacag cacaaacgcc cgcgccttgc
     1561 ccgccttttt gtcgccgacc acaatactgg aaacaatcgg caacagggga tacatacagg
     1621 cggtaaaact cagacccaaa ccggcgagaa aaaacgccaa aagattggcg ttgagcgtat
     1681 cccaagacag cttgaaacgg ctgtcgccgc cctcatcccc cttcgggggc ggcagcaccc
     1741 cgctgccgtt ttgagaggaa ggctgcaaaa agcggtcttt ggcggatgcc ggttcgtcgg
     1801 tttgcggatg gtaagtgccg ttgccggaaa tatcaaactc ggtatccacg ggcggatagc
     1861 acacgccggc ttcggcacag ccctgatagg tcaaaaccaa tttatacggt tcgccgacag
     1921 cctttgcata aggaaaggca acctgcgctt cgtgatggta aaccgtctgc ctgccgaaaa
     1981 actcgtcttc cttctcttca cccttgctga aagaaggctg tcccaacaaa tccgccggat
     2041 cggtcttgcc gacgattttc gcctgataca tatagtatcc gtcggcaatc ctgaaacgga
     2101 cgttcacacc gtcgtcggca acggcaagct ccggcacgaa tgccttttcc ggcggcagca
     2161 gatcgttcgc atccagcgcg aaagctcgtc cgcacaacat caaaaatacg gcgaacaggc
     2221 aaatcagttt tttcataatc gaatccgttt cagacaaata atttgtctgc attataaatg
     2281 gtaaggttga cggtgggatt taatttatgt aaaacccgcc attatccgaa cctatttcca
     2341 taaacatctt atcgaacccg ccatgtacga tgtcaatacc cacgatgtcc gccgcttttt
     2401 cgcccgcgtg tggcagcagc ggctcaatcc gctgcaactg agcgcactgg aacagaaagc
     2461 cctccgcatt atcgaagccc atcccgaata ccaccgttat ctcgaacgca tcgaagacca
     2521 tctggacacc gactggctac ccgaaaacgg cgaaagcaac cccttcctgc atatgtcgct
     2581 gcatttgtcc gtccaagaac aggcgggcat agaccagccg cacggcatac gcgcaatcca
     2641 cgacaccctg tgcgccaaac gcggctggct ggaagccgaa cacgaaatga tggaggcact
     2701 ggcggaaaca ctgtggacgg cgcaacgcta cggcaccggt ttggatgtca atttctacat
     2761 gacccgactg cgcaaactca tcggcttggg tgcagaaaat caagccaggt tgaacccgca
     2821 tgaaatcgcc tgaccatacc aaccgcctgc aaaatgccat ctgaagcgga acaacccctt
     2881 tcagacggca tgcatttccc ccaatcattt ccacaacgcc tttttcagca taatcaacca
     2941 atccttctta tccaaaacgg ggcgttgtgc aaacacatcg tatcggcacg cgtccagttt
     3001 ctgcaaaatc aactgcgccc ccaacacaat catacggagt tccaaaccga tacgcccctt
     3061 cagttccctt gccaaaggcg aacccgcctt cagcatacgg aatgcgcgtc ggcactcata
     3121 cgccatcagc cgctgaaacg ccgcatccgc ccgtcctgcc gcgatctgtt cctcagaaac
     3181 accgaatttc aacaaatcgt cctgcgggat ataaaccctg cccttttgcc aatccacagc
     3241 cacatcctgc cagaaattga ccagttgcaa agccgtacaa atgccgtcgc tttgcgccac
     3301 gcacaccgca tccgttttcc cgtacaaagc cagcataatg cgtccgacag ggttggcgga
     3361 acgccgacaa taatcggcca gctcgccgaa atgcgcgtac cgcgttttga ccacatcctg
     3421 agaaaatgca gaaagcaaat cataaaacgg ctgcaaatcc aaaccgaacg gcacaaccgc
     3481 ctcggcatcc aatcgtgcaa tcaaaggatg cgccgaccgg ccgcccgatg ccaacacgtc
     3541 caactcgcgc cgcaaaccct ccaaccccgc caacctagct tcagacggca tactgccctc
     3601 gtccgccata tcgtccgccg tccgtgcaaa cgcatacacc gcatgaaccg gcttcctcaa
     3661 cctgcgcggc aaaatcagcg aaccgacggg aaaattttca taatgcccaa ccgacatacc
     3721 ttctccatcc atcaaacaaa atgccgtctg aaacggaaca aacccttttc agacggcatc
     3781 agatacctcc aagctgccgg caatcagtgg tggtgatgac cgtgcgggcc gtggacatga
     3841 ccgtgtgcga tttcctcatc ggatgcatcg cgcacgcttt caaccgtagc cttaaaacgg
     3901 attttcatgc ctgccaaagg atggttgccg tccaccaccg ccttgccgtc ggcaacatcg
     3961 gttacacgat agacgacaac atcgccggtt tcaggatcgt cggcttcaaa catcatgccg
     4021 acttcgactt caacagggaa cacgcccaca tcttcaatac gaaccaactc cgaatcctgc
     4081 tcgccgaacg catcgtcggg cgaaagcgcc acatcgaccg tatcgccggc atccttaccg
     4141 tgcaacgcct cttccaccaa agggaaaatg ccgtcgtaac cgccgtgcag atacgcaatc
     4201 ggttcttcgg ttttgtccaa aagctgattg ttggcatcat acatctcata atgcagcgaa
     4261 accacggaat ttttcacgat agccatattt gtcctttcag gaacagcaga ttgattacag
     4321 gcgcattcta acacaaccgc cgcgccggcc gattaccgtt aacctgttca taaactgtac
     4381 agcacatatt tcaatgtaaa tttttgttat tttattgcgg tgtaactttt ttacaacatt
     4441 cttaaaacca ttccgatctg tctgccgact ttcccaatcc gccttaataa atcatacaag
     4501 atactgaaat tatattaatc tctataatat ttatccctat cgaattttta acagcaaaac
     4561 cgttttacag gatttatcaa tccgcccgcc agaaaacttt tcattcaaac ctttttccca
     4621 tctgtacgac attgcaatcc cttattccat agtgcataat tacgcaaatt cagcgatgaa
     4681 tttccaaccc ggtttgtagt atggtcgata aagacctatt tgtttcaata atttaaattg
     4741 gttctaaagg ttactaaaat gaaaaaatcc ctgtttgccg ctgctttgtt gtctttggtc
     4801 ctggcagcct gcggcggtga aaaagccgct gaagctcccg ctactgaagc acctgccgcc
     4861 gaagctcccg ctgctgaagc acctgccgcc gaagctcctg ctactgaagc acctgccgcc
     4921 gaagctcccg ctgctgaagc tgccgctacc gaagcacctg ccgctgaagc tgccgcttct
     4981 gaggctcctg ccgctgaagc tcctgctgcc gaagctgcaa aataagcatt ttccgcttgc
     5041 aaaaaagcag gatacgttca gtatcctgct tttttgattt ttcagacggc atcagattcc
     5101 cttcctcaat cttctcccta cccttccgac aaacatgcct gaccttcata ccgaattttc
     5161 ccgactcctg ccggcagatg aaattgccga actttctccg acgcttttaa aagaccagcg
     5221 caaccgcttt acgtctgcac cagacatcat tttgcagccg cgcagcgttg aaagcgtgca
     5281 aaccattatg cgtttttgtt acaaacaccg tattccggtt acgccgcaag gcggcaatac
     5341 cggtttgtgc ggcgcggcag tatcggaaaa cggcgtattg ctgaaccttt ccaaactcaa
     5401 ccgcatccgc agcatcaatt tgtcagacaa ctgcataacc gtcgaagcag gttccgtact
     5461 ccaaaccgtc caacaggcag ccgaagcctc aaacaggctg ttcccactca gtctcgccag
     5521 cgaaggctcg tgccaaatcg gcggcaacat cgcctgcaat gccggaggtt tgaacgtatt
     5581 gcgttacggc acgatgcgcg acctggttat cggtttggaa gtcgtcctcc ccaacggcga
     5641 actggtttcc catctccatc ccctgcataa aaacaccacc ggctacgacc tgcgccatct
     5701 gtttatcggc agcgaaggca cactgggcat catcactgcc gccacactca agctttttgc
     5761 ccgtccctcg gacaaggcaa cggcatgggt cggcataccc gacatcgaat ccgccgtccg
     5821 cctgctgacc gaaacccaag ctcactttgc cgaacgccta tgcagttttg aactggtcgg
     5881 ccgttttgcc gccgagttgt cttccgaatt cagcaaattc cccctgccga cacattcaga
     5941 atggcatatt ttacttgagt tgaccgactc attacccgac agcaatcttg atgatcggct
     6001 tgtcgaattt ctttataaaa aaggatttac cgacagcgta ttggcacaaa gcgaacaaga
     6061 acgtatccat atgtgggcat tgcgcgaaaa catctccgca tcgcaacgca aactgggcac
     6121 cagcatcaaa cacgatattg ccattcctat cggacgcgtt gccgactttg tccgccggtg
     6181 cgccaaagat ttggaacaga attttaaagg catacaaatc gtctgcttcg gacatcttgg
     6241 cgacggcagc ctgcactaca atactttcct gcccgaaatc ctcagcaatg aagtctatcg
     6301 ttacgaaaac gacatcaacg acgcagttta tcgcaacgtt cttgcctgca acggcacgat
     6361 tgccgccgaa cacggcatag gtatcatcaa aaaacagtgg ctggacaaag tacgcacgcc
     6421 tgccgaaatc gccctgatga aaagcatcaa acaacacctt gatccatata acattatgaa
     6481 tccgggcaaa ctgcttccgt aaccggcatt tctgatttgc atacacaaca aagaaaggga
     6541 caatagatcc gattgtcggt ttagcgcgag ctcgtgagtg cggtaaaaaa ttggtggaaa
     6601 tgacacgaaa aatgaccgca tttttaaaat aaaaaaatcg gcagtaaatt tctctgccga
     6661 ttttattttg ttacaactta acttaaaacg tccactgtaa attcaacgca ccttgtttag
     6721 cctgatgatg tttgcctgtt tggcggttga atgttgcttg taaagttaag tgagatttga
     6781 ttttcactgc tacacctaat tggctctcaa ttgccgtctt attgtttatc actcgacgct
     6841 ctccgtctat ttccacaccg aaaggtttgt tgtggtaaag cgcgttcaca gcggcgaaag
     6901 gttcaatagc gatattttta tagagcgaaa attgcgcttt agcttgaacg ccaacccgag
     6961 tttgtaattg gcgggagcca agtaaattca cgtgggcatt ttcgctatcg ctgaattttc
     7021 cgtttacccc caaataagtc aattgtgcct gtggttgtag gtaaacacga aggctgttgc
     7081 cctttttagt gaagtgttcc gccaataaag cattgtaacc cgcttcaatt gaggcggtaa
     7141 taccttttga agtaaaacgt tctgtagcat cttcagtgtt aatgcggtgg cggaagcgtt
     7201 gatattgtac ccagctatcc gcatacgcac ctgtctgttt gtcctgaagc tgatgccaag
     7261 tggcgtaaac gcctgcacca aagcctttca catttcccgt tgtaagattg tctgtatctg
     7321 ggttgcggaa agtactgcgt tgttctgcct gtccgcccat taagccaata gaaagttgat
     7381 tactttcgtt ttgccatgtg aatacttcgc cgccgagttg cacacctttt cgatttccct
     7441 ctactggcgt ggttttacct tgcacccatt gcttagaatg tccgtcaatc acacgcaacc
     7501 acaagccttt gcgtggtaaa gtgcggtcaa aaatatcgct gtttttgtcg ttcaaacgca
     7561 aggcgaataa ggtattggcg gcttgagcct gttgtgcata aatcgaaata tcatcgcgtt
     7621 cttgcacttt ggtaaaaaag ccttctgggc gttgttgtaa agaaagcgta taaattccct
     7681 tttggtgttt gccagaaaga cggaatgcgt gtttatctgc tgtgccattt actttgataa
     7741 tttgatgccc gtcgagactt tttaaatcgt ctattggatt ttcgaagatg atgtcggaag
     7801 tgccagttat atttttttca aaagttaaaa ctggtgtttc agggacttta tcttttagac
     7861 cgtaagcaaa acgaaaacga gctccgccag cataatcttc ttttacgagt aaactttcac
     7921 ttttagtatt aaaacggatg tctgcattcg ttgtttttaa ttccccaaca tcagaatccc
     7981 aacggggctc ccagagagaa ttttctaagc ggaattcatc caaactaatc gtttgcccga
     8041 taacgtgcga gttgtctgta acctcaatat agtggaatgg atctacatca gaatagagat
     8101 gctcttgcga actagaaagc tgattaagtg ttgggcgaag ccattcgata taattaccta
     8161 cagataaaat ttcgctgttg atatggctat tttttatttg tggtgctaag gcgaaaatat
     8221 cgctctttat gcgtatcggg gcatagcttc ctaaggatgg ttgtctacac ttatcattat
     8281 tggaattccc agtatttaca cagtccttaa aatattgccg gagtggtttt tcttcttccc
     8341 catttctttt ttcaaccccg aaacctcggg cgaagccaac taggtaatct tcggtatatt
     8401 tttgatcata aaaagaaatc ttttttgagt tgttgatgtt ttcgaattgg tgtgttttag
     8461 agaatagtgc gggaactttg agagagttct gagagctacc attcgtcggt tttagaagat
     8521 aagtttcttg tttccagtat tcgctgcttt tatctctaag tttttttaag cgatcaattt
     8581 gctcatttgt taatttagaa ttgtcgtaaa cgtaatcaac agccataaag aggagaggta
     8641 taaagaatag aaaaaaatag acttacaata aatgattttt taaacttctg cttgcttgct
     8701 tcgagtttca taataaattt tcctttgtca agtaaagata aatggggcgt ggattttagc
     8761 atagaattga acaaaaaatg tcatttagct cacatttttc tctatttatt tcttatttat
     8821 taaaagtaaa cgtttgcttt ttgctatttt gtcaagccag tttgaaaatg tgtataattg
     8881 ccctcgttat tcacaaaaat ttcaggaaaa atgaccgcac tttacccttg gttaatgcca
     8941 atttatcatc aaattgctca aacctttgac gaaggtttgg ggcatcatgc cgtgctgatt
     9001 aaagcggatt ctggtttagg tgtagaacgt ttacacatca ggcggcagcc ttgcccatac
     9061 cgtctgaagc actgtttcca caatcagcgc gtatgcttaa tcaaccgctg tttctcgcgt
     9121 ttccaatccg cctctttcat actctgacgt ttgtcgtgct gtttcttacc ttttgccaaa
     9181 ccgatttcca tcttgatttt tccgcgcgaa aaatgcaaat ccagcggcac aatggtgtag
     9241 ccggcacgtt cggttttgcc gattaatttg ttgatttccg actggttcaa caagagcttg
     9301 cgcggacgta cggcatctgg tttaatgtgt gtcgaggctg tgggcaaagc cgtaatatgg
     9361 cagccgacca gataaaacgc gtcttttttc caatagatat aactctcttt aagctgtacg
     9421 cgcgcggcgc ggattgcttt gacttcccag ccttccaaga ccaaaccggc ttcaatccgg
     9481 tcttcaatga aaaaatcgtg aaatgctttt ttattgttcg caatagccat aaacatccta
     9541 tcaatatccg ccgtcagacg gcataaaccc gaaaacagaa cccatcatac cgcctcttca
     9601 accgcctgca caatcttctc gggatacagc ctgttgaggc agtcggtatg ccccaacgga
     9661 cattcacgtt tgaaacaggg cgaacattcc aagtgtaggc tgacgatttt cgccctgtcg
     9721 ctcaaaggcg gcgtatgcgt cgggctggaa gaaccgtaaa ccgccaccac tttcctgccc
     9781 aatgccgccg ccaagtgcat cagcccgctg tcgttgcaca cgaccgtgtc cgccaacgac
     9841 agcaaatcca ttgcctgcga caaatcggtt ttgccgcaca aattgacaca cataccgtct
     9901 gaaaggcggt tgatttcctc ggcaatttca tcatcttttt gcgaaccgaa caaccaaacc
     9961 tgccaacccg ccgccagata atgtttgccc aactcggcaa aatgccttgt cggccaacgc
    10021 tttgccggcc cgaattccgc acccggacaa aaagccagaa caggctttcc aagattcaaa
    10081 ccgaaagttt cgacagaaat ttcccgccgc cgttcatcaa tggaaaactc gggaaatcct
    10141 gaacacccgt caaaatcttc ctgactctga tgcgcgagag ccgtataccg gtccaccatc
    10201 aaaggcagac gttccttatc cagcctgcgt atatcgttca acagaaaata acggctttca
    10261 ccgacataac ccgtcctttt accgatacct gtcgccagcg cgatgattgc cgatttcaaa
    10321 gaaccgggca acacgataac ctgatcgtat ccgcgccgcc ccaaatccct accgacccgc
    10381 caacggcgtt tcaactccaa cgcaccgtgt ccgaacggat tttcaagaat ctcattcact
    10441 tccggcatac gctcaaacac cgccatcgac cacttcggtg cgaacacatc aatcgtgcaa
    10501 ccggggtgaa gttccttcaa acggcggaac aagggctggg tcatcacgca gtcgcctatc
    10561 caactgggag aaataatcag gattttgatg gacataacaa gaaaccgaaa tcagacaggc
    10621 agaattttac cgcgaaaccg ttggaaaacc tatcttgccg cattccgaac gccgtacgtg
    10681 caaatatgaa aaagcccgaa cattcaagtt cgggcttcaa aattctggct ccccgacctg
    10741 ggctcgaacc agggacctgc ggattaacag tccgtcgctc taccgactga gctatcgggg
    10801 aatggggcgt attatagcgt ccggaaaaaa tgtgtcaatc cttaattttg gaaaaatggg
    10861 cgacaaaacg acaagcatat gaatcagaaa gacattaaga ccgatgcctt aaaaggattg
    10921 ccgttgtatg aatttccaca gccgtcatca caccatattt aagcccgatg agccgttctg
    10981 ccctcccccg cttaaaacaa tgccgtctga acttcgccgc gttccaaagc cagtaaaaac
    11041 tgtttgcggt tcaacccgcc cgcgtagccg gtcagtttgc cgtcgctgcc gatgacgcgg
    11101 tggcagggaa tcaggacaga caccttgttc tgcccgttgg cggcggcaac ggcgcggacg
    11161 gctttggggt tgcccaaacg ctgcgcctgc tccttgtagc tgcgcgtttc gccgtaagga
    11221 atcgccaaga gcgcgtccca tgcctgcttt tgaaactcgg tgccaatctg ctccaaaggc
    11281 gtggcaaagg ttttcagacg acccttgaag tataagtcca attcctgccg caaaagttgc
    11341 gtccgctcat cctcccgaaa cacaaaccgt ccgcgcaagg ctttttggac ggcggcaatt
    11401 tcctgttcca aatgcttctg tccgacaaac tccagcagac acaatccctt atttccgaac
    11461 accgccagca tctcgcccaa aggcgtggca atggcggcac acaccagctc attcaaactg
    11521 tcgggataac gcgcttccaa cagacggatg gctcggcgga tacggacata ttcttcaggc
    11581 gcgcagccga tattgtccca aaaatcccga tcgaactgcc cggcttcgca ttccgtcaaa
    11641 ttgggatgcg gcataacgcc gcactcacaa acccgggttt cgagccaata gcggatttca
    11701 tcccattttg acggcagatt gtttaaggaa ggcagggtaa tcattcgttt gctccgtatc
    11761 tctatcatgg atttgacggc aaaattccca attttcgcca ttcccgcacg ctgatgcagg
    11821 aacgggctac gacgtaaatc ttgagggtta ggttgcggca atgcctaaat atgcgatatt
    11881 tccaaagcct cagggaaagg aattaaagac ttcagacgac ctgcaaaggc tcgtctgaaa
    11941 ccacgatttt tgcatttgcg cattctggca catcatccaa ccgtttcggc acattcctgc
    12001 cgccgttgac agcctataat gaatccactt attcatcaag caaaggaatc atctatgcaa
    12061 acccgcattc tctccgccgt actgctggct ttttcaaccg ctgcctttgc cgggggcgca
    12121 ttcacgctgc aattcgacaa cccgtccgaa gacggcggct tcacgcaaaa ccagcttttg
    12181 agcgcgcctt acggatttgg ctgttcgggc ggcaatgctt cgcccgcgct gtcgtggaaa
    12241 aatccgcccg ccgggacaaa aagtttcgtc ctgaccgttt acgataaaga cgcgccgacc
    12301 ggactgggct ggatgcaccg ggtggtcgcc gacattcccg ccgatgtcca ccgccgcaac
    12361 gcgacctcgc tgcaattaag ccgctgcgcc aacatcgccg acgaccagtc cgcagccata
    12421 tcggcggtaa tcagtttgcg gatttgccgc atcaggttga cgccttcgta cacggcaaaa
    12481 ccgatgccgt catgctgcaa ccacgccaac acgccgcaaa gcgcgacctc cgccgcattg
    12541 tgcggcactt cttcatccgt cagcaccgcc gccgcataat caaacgccgc gcccatccgc
    12601 ccggggtgcg gcagcttcac cgcatcgcac actgcctgcg ccgtcccgta ttgtgcggca
    12661 aacctttcta tggcttcctg ttcgaaagca atccattgcg cctgatagag gccgtctgaa
    12721 tcgggaatat taataacgtc aaacgtctgc ccgcctgcca aggcgaccgc ctcacccgcc
    12781 gcaatcctca attcgcgcct cgcccaccgc agcttcttgc ttccgcgccg cacgataagc
    12841 acagccggtt catataccgc cacgctgcgg tacaaggcgg tatgatgttg cacgatgccg
    12901 cccaaagcac ccaatcgttc gcgcgtatga aagtaatttg acggcactat tatctccaac
    12961 acgcagggcc gcacataagg cgcagccctg tttaccctga tttgggaggg ttacttccca
    13021 aaaataaacc aaaatcccac cgccccgaat agacgggttt caaccatatt ccgtcggcgt
    13081 acctgcaact tggctccctc ccctgtgagg gagggtcggg gagagggtaa aacggggcag
    13141 atacaggcaa tatttccgtt gccgccccaa tgccctctcc ctaaccctct ccctcgggag
    13201 agggaatgga ttgccgttga aataaatcgc tctacataaa aatcaatgcg ttatctcaaa
    13261 cccacgttag gtctaatcaa atggtcggac atccgtatcc gacagcccat cttcttttca
    13321 gacggcattt ccagccaaca accgcgccaa tatcccctca tacaccgctg acagcttcgg
    13381 aatatcttcc agccgcacgt tttcgttgat ttggtggatg gtggcattgg acgggcctaa
    13441 ttcgatgagt tctttcgcaa tggctttaat gaagcgtccg tccgaagtgc cgccggtggt
    13501 ggacagttcg gtctccacgc cgcaggtttc aacgatggct gcgcgtgcca cattggttag
    13561 tttgcccgca tgggtcagaa agggctgccc cgaacacgac cactgcaaat cgtattgcac
    13621 gccgtgtttg tccaaaatgg cgtggacgcg ttgtttcagc cctgcttcgg tggactcggt
    13681 ggagaagcgg aaattgaatt tgacgttcag ctcgcccgga atgacgttgg tcgcgcctgt
    13741 gccaccgttg atattggaaa tttggaaact ggtcggcgga aagtattcgt tgccttcgtc
    13801 ccatacttcc tgcgtcagct ctaacaaggc aggggcaaaa gtgtggacgg ggttcaccgc
    13861 caaatgagga taggcaatat gcccttgcct gcctttgacg gtcaggttgc ccgacagcga
    13921 gccgcgccgg ccgtttttaa tcatatcgcc caatttgtcc acggcggtcg gttcgccgac
    13981 gatgcagtag tcgataagct cgtcgcgcgc tttcaacaca tcgacgactt tggtcgtacc
    14041 gtccagcgcg tcgccctctt cgtcggaagt aatcaggagc gcaatgctgc cttgatggtc
    14101 gggatgttcg gcaacgaaac gttcgcaggc ggtaacaaaa caggcgatgc cggttttcat
    14161 gtccgccgcg ccgcgcccgt ataatcttcc gtcgcgctca gtcggttcga acgggggcga
    14221 atcccatttt tcaacagggc ccgtcggcac aacgtcggta tgccctgcaa aacagacgac
    14281 gggagctttc gtgccgcgtc gcaaccagat gtttttggtg tcgccgaaat ggagttcttc
    14341 agccgcaaaa ccgattttgt gcaggcgttc ggcaaggagt ttttggcaat ctcggtcgtc
    14401 gggggtaacg gatgggcggg aaatcaattc tttggcgagt tctagggatt gggtttcggt
    14461 catttttcgg cttttctgtt tgagatgccg tctgaacgga gtttcagacg gcatttgatg
    14521 ttgaatggaa cgggctaacg atagcgaagc gggttcttca ggtcaagcac catgacacgc
    14581 ttcgtaaagc ggcagcaaat cttccactgt ttccgctatc catttcacga catcctgctt
    14641 gcccaaatcg tcgcgctcga tgtgtttgcc gatgcagaag aaatcttcgt cgttttgcaa
    14701 ccttcggtcg gattcatttt gctgcgcgac ggtgcggtag tcgtcgtatt cgctttccgc
    14761 accgtgccac atatcgaatg cagcgtattt gtcggtatcg aaatcatcca gccagcggtt
    14821 gtattccggc agtgcaatcg gcgacacgtc ggctttgtag caatgccagt ccaagctgac
    14881 actcaaacgg cggcggttga gcagtatcga caaaatcgcg gcggaatttt tatattgttc
    14941 gtatttgaag taggcaaaga aatgggcgcg aacctgccag ccgttgcacc agcgttcgat
    15001 gtgcggcggc gcaaacggcg cacccaattc ggcggcaacc tgctgaatca gctgctgcca
    15061 tatctgccag ttttccttgt agtcggcttt gatttgcgga atgctttcag gctggtattt
    15121 tttaagctgg gaaaattgga aaaacgggat attgaacaaa tcgcaacttt tcggggtcag
    15181 cataatatat ccttgagacg attgtttcag acggcattat ctgcgccggc gcgccgccat
    15241 gatttcgccg atttcggtca gtttctcttt tgggataaag gttttgccca tgtcaaataa
    15301 gggttcttca atcgccaaat gaacatcata tcccgccaca aaacgtttga acgcttcctc
    15361 atcggggaca taagcgttgt ctgcttcgag tttggcaaat tcggcagcca cggcatccca
    15421 gttgccatac aggctcacat gctgacgcaa aagctcgtcc acgctttctt gggcttgcgg
    15481 cgcgtattgc agcagcagcg ggaagaagtt ttcttcttcg tcttcatggt gcagcggcgc
    15541 ggcaacgttg aaatactggg cgatttggcg gatggtttgc aaaacaatct gattgcagcc
    15601 gttttcggcg atatagtccg acagcatggc gacttgtccg cagaaacggc gcactttgcc
    15661 gtggcaggca tacagcattt caatcggttc ggcaaaggta acgcttttgg tttcaaacgg
    15721 attcatggtt tttaggtttt attcttaaat taacgtttcc agattataac aaaacagcct
    15781 gctcaaggca ggctgtctgt tttcaagctt taggcgaatt agtcaaccaa agtaatttta
    15841 ccgttcatca aagcaccgtg acccgggaag gtgcaggcaa atttgtagtc gccgtcagcc
    15901 aatttggcag gatccagagt cagggaagac tcttcgccgc cgccgatcag tttggtgtgg
    15961 gcaacaacgc gcgcatcgtc aggtttgaca tagtcggtat cggcagcacc tacgccgtct
    16021 ttaaatacgc cgtccatgtc ttcagctttg gcaatcacaa ggttgtgacc catgctggct
    16081 ttgggttgcg taccggtatg tttcagagtg atggtaaact ctttacatgc tttgctgact
    16141 tggatgtctt tggtgttgaa ctgcatattg tcgttggatt cgacagttgc cgcacagttg
    16201 ccggcagcag gggcttcggc agcatctgca ggagcagcat ctgcaggagc agcttcggcg
    16261 gcaggtgctt cggaagcggg tgcttcagca gcaggagttg cctcggcagc aggcgcggca
    16321 ggttcttgag agcaggcagc caaaccgata acggcagcag aaatcagagc cagatacgct
    16381 ttcataacaa atctccaatc gataaaataa tattcggttt tacaggaatc aaagtgcaac
    16441 cgccattaac aaaaccttga aaaagattcc gccgcgttgc acaaacagat gtttcggggt
    16501 ggcattttgc tacaaatttc atttaaaatc aaagcctgtt tgcaagttta caatcgttta
    16561 cccaaaaaag ggcaatttta ccccgaacct atttctttag tattagaccc attatccttt
    16621 acttcttaat attaacggat gtttacacaa attcccgtat acattttatg cgccatgcct
    16681 tctgaccaag tttgccaatg cctccgccaa ttcgggatgc cgtttttcca actttaccgc
    16741 cgccgaaccg aaactctcca gcgcagcctt actcaaatgc agggtattgg ttttcggcgg
    16801 tttttccggt ttcgggacca gcctgaccga aacagagcgt atcgaagcat caagccctgc
    16861 caactgcggc aataccgacg gtgcaatcat tttcaagcgc gatgccgcca tattgtttgc
    16921 cgccaaaagg acaagcctgc cgtcttcgat acatgccgtc tgaaaatgcg ggtgcaggtt
    16981 ggcaggcagc agttttttca cggcggcatc caaccgccgc cactgtcccg cctgtttcaa
    17041 aagtccggaa agcagcgcgt cccgcctgcc caactgttcc aaattcataa aacatacacc
    17101 caaaaagatt gaaataccgc aaacgcgcct ttatttcaga cggcattagc actttgcaca
    17161 aacgcttgtg ttaaaatcgc gttttcgccc actattatat caggcgcagg aattattcat
    17221 gctgacaaac attgccaaga aaatcttcgg cagccgcaac gaccgcttgc tgaaacaata
    17281 ccgtaaatcc gttgccagaa tcaacgcgct cgaagaacag atgcaagccc taagcgatgc
    17341 tgatctgcaa gccaaaactg ccgaattcaa acaacgcctc gccgacggtc agactttgga
    17401 cggcattttg cccgaagcct tcgccgtctg ccgcgaagcg tcccgccgca ccctcggtat
    17461 gcgccacttc gacgtgcagc ttatcggcgg tatggtgctg cacgacggca aaatcgccga
    17521 aatgcgtacc ggcgaaggca aaaccttggt cgccaccctc gccgtctatc tcaacgcgct
    17581 ggccggcaaa ggcgtacacg tcgttaccgt caacgactac ctcgcctcac gcgatgcggg
    17641 cattatggag ccgctctaca atttcctcgg ccttaccgtg ggcgtgatta tttcagatat
    17701 gcagccgttc gaccgtcaaa acgcctatgc cgccgatatc acctacggca ccaataatga
    17761 attcggcttc gactacctgc gcgacaatat ggttaccgac caatacgaca aagtgcagcg
    17821 cgaattgaat tttgccgttg tcgatgaagt ggattccatc ttgattgacg aagcgcgcac
    17881 tccgctgatt atctccggtc aggcggatga caacatccag ttgtaccaaa tcatgaacac
    17941 cgttccgccc cacctcgtcc gtcaagagac agaagaaggc gaaggcgact attgggtcga
    18001 cgaaaaggca catcaggtca tcctgagcga agcaggtcac gaacacgccg agcaaatcct
    18061 gacccaaatg ggattgctgg cagaaaacga ctccctctat tccgccgcca atatcgccct
    18121 gatgcaccac cttatggcgg cattgcgcgc gcattccctc ttccacaaag accaacatta
    18181 cgtcatccaa gacggcgaaa tcgtcatcgt ggacgaattc accggccggc tgatgtccgg
    18241 ccgccgctgg tcggagggtc tgcatcaagc cgtcgaagcc aaagaaggcg tggaaatcaa
    18301 acgcgaaaac caaacccttg cctccatcac cttccaaaac tatttccgcc tgtacaccaa
    18361 gctctccggc atgaccggca cagccgatac cgaagctttc gagttccaaa gcatctacaa
    18421 cctcgaaacc gtcatcatcc cgaccaaccg ccctgtacag cgcaaagact tcaacgacca
    18481 gattttccgt tccgccgaag aaaaattcga agccgtcgtc aaagacatcg aagaatgcca
    18541 caaacgcggg cagcccgtcc tcgtcggtac gaccagcatc gaaaactccg aactggtctc
    18601 ccaccttctg caaaaagccg gactgccaca caacgtcctc aacgccaaag aacacgaacg
    18661 cgaagcgctg attgtcgccc aggcaggcaa agtcggcgcg attaccgttg ccaccaatat
    18721 ggcgggacgc ggtacggaca tcgttttagg cggcaacctg aagcaccaaa ccgatgccat
    18781 ccgcgccgac gaaaccttga gcgacgaaga gaaacaggca caaatcgccg cactcgaaga
    18841 cggctggcag gcggaacacg acaaagtgat ggaagcaggc ggtttgcaca tcatcggtac
    18901 ggaacgccac gaaagccgcc gcatcgacaa ccaattgcgc ggacgttccg gccgtcaggg
    18961 cgaccccgga tccagccgct tctatctctc ctttgaagac ccattgctgc gcttattcgc
    19021 actcgaccgc gccgccgcca tcctcaaccg cctcgccccc gaacgcggcg tcgccatcga
    19081 acacaacctg ctgacgcgcc aaatcgaagg ggcgcaacgc aaagtcgaag gcagaaactt
    19141 cgatatgcgc aaacaggttt tggaatacga cgacgttgcc aacgagcaac gtaaagtcat
    19201 ttacagccaa cgcaacgaaa ttttaaccag caaagacatc agcgacctga tgaaggaaat
    19261 ccgttctgat gtcgtcagcg acctcgtgga tacctatatg ccgcccgaca gcatggaaga
    19321 acaatgggac atcccgactt tggagaaccg tctggctgcc gaattcagac tgcacgaaga
    19381 catccaatcc tggctgaagg cggacaatgc gattgacggt caagacatca aagaacgcct
    19441 gatcgaacgc atcgaaaacg aatatgccgc caaaaccgaa ctggtcggca agcaggcaat
    19501 ggccgatttc gagcgcaacg tgatgttgca ggtcatcgac aaccaatggc gcgaacacct
    19561 cgccgctatg gactacctgc gacaaggcat acacctgcgc agctatgccc aaaaaaatcc
    19621 gaagcaggaa tataaacgtg aagcctttac catgttccaa gacctgtgga acggcatcaa
    19681 attccatatt gcctccctgc ttacctcggt tcaaatcgaa caaaaccctg tcgcggtggt
    19741 tgaagagcaa cccatcggca acatccagtc catccattcc gaatcgcccg atatggaaga
    19801 acttttgggt cagtcgcaaa ccgatctggt taccgaagcc tttaatcccg atgggacaga
    19861 tttcagcccc gaagccttgg aagcgcgggg gcaaatcgtc caccgcaacg acccctgccc
    19921 ctgcggcagc ggtttgaaat acaaacaatg ccacggcaaa ctggcttaag cgtttgaacg
    19981 caaatgccgt ctgaacatcc cgctcccgtt tcagacggca ttttgcctga accgccacat
    20041 ccgactgcca ttccgaaaaa tcccgatttc gtaccgtccg taccaaaaac agacatcccg
    20101 tccgccccac atcatgattc catccgactt cattgacgag cttttagcca aaaccgatat
    20161 tgtcgatatt atcgacgagc aggttccgct gaaaaaaggc ggggcgaact atatggcgtg
    20221 ttgcccgttc cacaaggaaa aaacgccgtc gttttcggtc agtccaacca agcagtttta
    20281 ccattgtttc agttgcgggg cgcatggttc ggcgattggt tttgtgatgg agcatcaggg
    20341 gctgtcgttt ccggaggctg tgcagtttct tgccgaccgt gtgggcatgg ttgtgcctaa
    20401 agtgcgtggg cagaacgata atcccgaagt ccgtgccgaa cgtaagaaaa aacagcagac
    20461 gctggaagaa acgacggcgg cggcggctga tttttacgcg caacagctaa aattcaatcc
    20521 ggcggcaaaa gcttatttgg acaagcgcgg cttgagtgca gaagttatcg cgcattatgg
    20581 tttgggctac gcgcccgacg gctggcagcc tttggcgcaa gtgttccaac cgtatccgaa
    20641 taccgcgttg gtggatacgg ggatggtgat tgacaatgag gggcggtatt acgaccgctt
    20701 ccgccatcgg attatgttcc ctatccgcaa tccgcgcggg caggtcatcg gtttcggcgg
    20761 cagggtgctg gacgactcca aacccaaata tctaaactct cccgatacac ctttgtttga
    20821 caaagggaaa aacctttacg gcttgtatga ggggcgtgcc gctgtcaagg aagcggagcg
    20881 gattctggtg gtcgaaggct atatggacgt ggtcgcgctg gcacagttcg gcgtgggcta
    20941 cggtgtggcg gccttgggca cggcaacaac agctgaacac gtcaaaatcc taatgcgtca
    21001 ggcagacagt atttatttct gtttcgacgg cgacagcgcg gggcgaaaag cggcttggcg
    21061 cgcgctggaa aacgcgttgc cgcagttgaa agacgacaaa tcgctgcatt ttttgttcct
    21121 gcccgaggaa cacgaccccg acagttacat ccgtgcctac ggcaaagcgc aatttgaaga
    21181 cgcgcttctg aatcaaagca agcctttgtc ggagtatttc tgggaacacc tttcagacgg
    21241 cattcatctc aatacgcagg aaggcaaggc ggaattggtg aaaaccagtt cgccgctttt
    21301 ggcgcagatt accgcgccgg cattggctta tttgttaaaa caacggctta gcgaactggt
    21361 cggcatcgac cccgacaacc tcgcgcaact gctaggacag gaagcgccga agcggcacgt
    21421 caaacaaaaa aactacaaac tgcctccgat ttccgtcaaa cagcccgtca tgctgacgct
    21481 ggtacagcgg caaatccgca gcctcttgat aaatccggat tgggctgcat atatagacct
    21541 gcccgattat ctggcgttgg acggtgattt cgcctgcctt gccaatcttg ccgaatcgat
    21601 taaaaaccat gccgccgtac ccgaaaccgc tcaggtttta gagtatatgc gcggctcgcc
    21661 ttacgaagaa acgataaccc gaatcttcca ttcaacgcac caatcggaag aaatgaacag
    21721 cagcagtgaa gaagattgcg agaatttcca aatcggcatg aaaaaactgc tcaatgagtt
    21781 aaaatacagc caaatcgaaa cattaaaaca aaaaagcctg caatccggct taaatgaaag
    21841 cgagaaaaaa cttttgctgt cgttgctgac cgcaaaacaa aattgaccgg cggattccgc
    21901 cacccgtaaa cccgttatgc cgtctgaaaa gcacttaccc cggctgcaac aacgacacct
    21961 gcagaacacc catcccaaaa agccttcaga cggcatcaga gtacccgctc tgccacgcct
    22021 tcaggtgcgt tcaaacgcaa accgtcggca ccttaccaac agaaagcaga caatgtccag
    22081 aaaccaaaat cacgaagaat accaagacga tgcccgcccc ctgacgattg aggaacaacg
    22141 cgctcgcctg cgccaactca tcattatggg caaagaacgc ggctacatca cctactccga
    22201 aatcaacgac gcactgcccg acgatatgtc cgatgccgat caaatcgaca acatcgtcag
    22261 tatgatttcc ggtttgggta tccaagttac cgaacacgcc cccgatgcgg aagacatatt
    22321 gttaagcgac aatgccgccg ttaccgacga tgatgccgtc gaagaagccg aggccgccct
    22381 ttccagcgca gattccgagt tcggcaggac gaccgacccc gtccgtatgt atatgcgcga
    22441 aatgggacag gtcgacctgc tgacccgcga agacgaaatc atcatcgcca aaaaaatcga
    22501 aaacgccctg aaaaatatgg ttcaggccat ctccgcctgc ccgggttcca ttgcggaaat
    22561 cttagaactc atcgaaaaaa tccgcaaaga cgaaatccgc gtcgacgaag tcgtagaagc
    22621 cattatcgac ccgaatgaag tattgctcaa cgaattgggc ttggggcact tggaaaccac
    22681 agcacccgag aaaccttcca acgacaattc ggacgaaaac gaagacgacg aagaatcgga
    22741 agaagatgcg gatgaaatct cggcagccaa tctcgccgaa ttgaaacaaa aagtcatcgg
    22801 ccactttgcc caaatcgaaa aagactacaa aaaaatgatc ggtcgtttgg aaaaacacca
    22861 cagccggcac aaagactatc tcgcctaccg cgacgcgatt gccaacaaac tgctggaagt
    22921 ccgtttcgcc acccggcaaa tcgacagcct cagcagcagc ctgcgcggaa aagtagaaaa
    22981 catccgcaaa ctcgaacgcg aaatccgcga catctgcctc gaccgcgtcc atatggagcg
    23041 cgactacttc atccaaaact tcctgcccga aatcaccaat ctggaatgga ttgaagaaga
    23101 aatcgccaaa ggcagggttt ggagcgacgc gctcgaccgc ttccgccacg ccatcctcga
    23161 aaaacaaacc gagttggcag atatggaaaa agaaacccgc atttccatcg aagagttgaa
    23221 agaaatcaac aaaaatatgg tgtcgagcga aaaagaaacc gcagccgcca aacaggaaat
    23281 gattcaggca aacttgcgcc tcgtcatttc cattgccaaa aaatacacca accgtggctt
    23341 gcagttcctt gatttgattc aggaaggtaa catcggcctg atgaaagcgg tcgacaagtt
    23401 cgaataccgc cggggctaca aattctccac ctacgcaacc tggtggatcc gccaggcaat
    23461 cacccgttcg attgccgatc aggcgcgtac catccgcatt ccggtacata tgattgaaac
    23521 catcaacaag atgaaccgca tctcgcgcca acaccttcaa gaaaccggcg aggaacccga
    23581 ttccgccaaa cttgccgaac tgatgcagat gcccgaagac aaaatccgca aaatcatgaa
    23641 aatcgccaaa gagccgattt cgatggaaac ccccatcggc gacgacgacg attcgcactt
    23701 gggcgacttc atcgaagatg ccaacaatgt tgcgccggcc gatgcggcaa tgtacaccag
    23761 cctgcacgaa gtaaccaaag aaatactcga aagcctgacc ccgcgtgagg caaaagtcct
    23821 gcgtatgcgt ttcggcatcg atatgaacac cgaccacacg ctggaagaag tcggcagaca
    23881 gtttgacgta acgcgcgaac gcatccgaca aatcgaggca aaagcactcc gcaagctgcg
    23941 gcatccgaca agaagcgacc gtttgagaag tttcttggac agcgaagaca gcaagctgta
    24001 aaccaaaaaa ccgcaggttt caaatacctg cggttttttc ttacacaata aacaacgctt
    24061 ccacatatcc cacactccta tcc
//
LOCUS       DAWEYF010000009        23638 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.009, whole genome shotgun sequence.
ACCESSION   DAWEYF010000009 DAWEYF010000000
VERSION     DAWEYF010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23638
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.009"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(65..904)
                     /locus_tag="WGN93_000273"
     CDS             complement(65..904)
                     /locus_tag="WGN93_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ0226239.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1189..1264
                     /locus_tag="WGN93_000274"
     tRNA            1189..1264
                     /locus_tag="WGN93_000274"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1222..1224,aa:Arg,seq:ccg)
     gene            complement(1329..2522)
                     /locus_tag="WGN93_000275"
     CDS             complement(1329..2522)
                     /locus_tag="WGN93_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ0226240.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVSRAETARAATPVPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFESAGFEVGTYPYYDPAAVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2528..3631)
                     /gene="trmA"
                     /locus_tag="WGN93_000276"
     CDS             complement(2528..3631)
                     /gene="trmA"
                     /locus_tag="WGN93_000276"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ0226241.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFEAASEAVNRLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDNEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSVSAAQWNIEANRIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRTNLDTLAETH
                     TVERAALFDQFPFTHHIESGVLLKKKILGKSKR"
     gene            3774..4874
                     /gene="aroC"
                     /locus_tag="WGN93_000277"
     CDS             3774..4874
                     /gene="aroC"
                     /locus_tag="WGN93_000277"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ0226242.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRRETDQVEILSGVFKGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAVDTPDIARSDK"
     gene            4965..5390
                     /locus_tag="WGN93_000278"
     CDS             4965..5390
                     /locus_tag="WGN93_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ0226243.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5464..7449)
                     /gene="parE"
                     /locus_tag="WGN93_000279"
     CDS             complement(5464..7449)
                     /gene="parE"
                     /locus_tag="WGN93_000279"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ0226244.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7516..8040)
                     /locus_tag="WGN93_000280"
     CDS             complement(7516..8040)
                     /locus_tag="WGN93_000280"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ0226245.1"
                     /translation="MLDREGYRPNVGIILINERNEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIEFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQPSGNR"
     gene            8205..9500
                     /gene="serS"
                     /locus_tag="WGN93_000281"
     CDS             8205..9500
                     /gene="serS"
                     /locus_tag="WGN93_000281"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ0226246.1"
                     /translation="MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9573..10571)
                     /locus_tag="WGN93_000282"
     CDS             complement(9573..10571)
                     /locus_tag="WGN93_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ0226247.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEVEKLGGKYVDLDELYAQSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10696..11772)
                     /gene="prfA"
                     /locus_tag="WGN93_000283"
     CDS             complement(10696..11772)
                     /gene="prfA"
                     /locus_tag="WGN93_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ0226248.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAE
                     LTPVVEVFQNYQLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLP
                     KDTDDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PVDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11862..12632)
                     /locus_tag="WGN93_000284"
     CDS             complement(11862..12632)
                     /locus_tag="WGN93_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ0226249.1"
                     /translation="MNFTDTHCHLADAALRENLPHILTAARKVGVKRFIVPATCPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILWIAEIAAQIRGVGVADIAAITERNADSLLRP"
     gene            complement(12747..13736)
                     /locus_tag="WGN93_000285"
     CDS             complement(12747..13736)
                     /locus_tag="WGN93_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ0226250.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     VKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGVIAEWDETQGWYNLRIPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGRLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGKEEVEKELARLKL"
     gene            complement(13803..14486)
                     /locus_tag="WGN93_000286"
     CDS             complement(13803..14486)
                     /locus_tag="WGN93_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ0226251.1"
                     /translation="MFAFLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLAGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14677..16011)
                     /gene="glmM"
                     /locus_tag="WGN93_000287"
     CDS             complement(14677..16011)
                     /gene="glmM"
                     /locus_tag="WGN93_000287"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ0226252.1"
                     /translation="MAKKYFGTDGVRSEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVVDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAKVEKELEGKGRVVLRASGTEPVVRVMVEARQADWAREGAERIASAIGSL"
     gene            complement(16141..16998)
                     /gene="folP"
                     /locus_tag="WGN93_000288"
     CDS             complement(16141..16998)
                     /gene="folP"
                     /locus_tag="WGN93_000288"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ0226253.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRSGADYVSPEEEWARVEPVLAEVAGWGVPISLDTRR
                     TVIMEKALALGGVDIINDVAALNDEGAVELLARQADTGICLMHMQGLPKTMQINPKYQ
                     YVVGEVARYLKARSAECIAAGIAPQRIILDPGFGSGFGKPLQHNIALMRHLPELMAET
                     GFPLLIGVSRKSTIGELTGEANAAERVHGSVAAALASVARGAQIVRVHDVKATADALK
                     VWEALGINL"
     gene            complement(17138..18031)
                     /locus_tag="WGN93_000289"
     CDS             complement(17138..18031)
                     /locus_tag="WGN93_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEZ0226254.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVCIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18122..20236
                     /locus_tag="WGN93_000290"
     CDS             18122..20236
                     /locus_tag="WGN93_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ0226255.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20301..21779)
                     /gene="ubiD"
                     /locus_tag="WGN93_000291"
     CDS             complement(20301..21779)
                     /gene="ubiD"
                     /locus_tag="WGN93_000291"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ0226256.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGEDVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVIGMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(21799..22314)
                     /locus_tag="WGN93_000292"
     CDS             complement(21799..22314)
                     /locus_tag="WGN93_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ0226257.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPYPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLLIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNWLPPYETDTFGLHCNVVTQSDNQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22321..22851)
                     /locus_tag="WGN93_000293"
     CDS             complement(22321..22851)
                     /locus_tag="WGN93_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226258.1"
                     /translation="MVRQGEATLYWFLLIHYHYGREAGWFVWLAAAMCGLWLLRALTA
                     KLPQQRYAALFITLFFAAVLVFGRRDSMYWYPVLVNLMMLAVFGGSLFAGQTVIEKLA
                     RLQQPDLPEKAVRYTRRVTQVWCVFFIINGTLAALLARLGRYDWWAVYTGVIAYVLMG
                     MPFAGEWLYRKLVLKV"
     gene            complement(23054..23623)
                     /locus_tag="WGN93_000294"
                     /pseudo
     CDS             complement(23054..23623)
                     /locus_tag="WGN93_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
BASE COUNT         5395 a         6735 c         6154 g         5354 t
ORIGIN      
        1 tcccataaaa aaacggagca gatacctgcc ccgtttttat ttaatccgaa attttaatct
       61 aaatttagaa ttttgcaccg gattggtttg ccatatagtc aacagccgct ttgacttcgt
      121 catcgctcaa accggcattg ccgcctttgg ccggcatcgc gttaaagcct tcaagggcgt
      181 gtttgtgcaa ggtttctttg ccttttttga tacgcggtgc ccaatcgtct tttttgccta
      241 tgccgggaat accgggaatc gaaccgccgt ggcacacctg acaggttgct tcgaagactt
      301 ttttaccgtc aacgccgacc gcaggggctg ccgcaccctt gtcttctgcc ttcgcttctg
      361 ccggagctgc actatcggca ggagcagaag ctgttcctga agcggcattg tcggcaggcg
      421 cagcctcatc aggattcggg aaagaaccgc cgcttttgtt cgccatgtaa gtaatcgccc
      481 gtttgagttc ctgatcggtc aggtctgccg caccgccttt ggcaggcatg gcgttaaagc
      541 cgttcagcgc gtgttggaac aaggtatcga agccttgcgc gatacgcggt gcccaatcgc
      601 cgttgtgttc cagtttcgga gcgttcggca cattgctgtc cgccgcgtgg cattggatac
      661 agattttgcc gaaaatctgt tcgccttggc gttcgccgac ggggatgccg tcgcccatcg
      721 tcaattgtcc gacaggctgg atacgggtct gcgttgctgc ttccgtagtg gcatcgacat
      781 cgccgaacga gccgctgccc gccagcttaa tcaggaaata aaggactgca ataacaataa
      841 cgataccgct cacaagggta aacagtgcag agccttgggc tttgttgtcg cggagttgtt
      901 tcatttggta ggcctcgccg tcaggttagg ttgtgctgta aattatagtt tggtgtgtta
      961 aacgcagtta acaatatttt gctggattat actgaattca cagggtcttt ccaatcgcta
     1021 tcattgaaaa tatgaaaaaa tttgccaacg gtatctgtat aaaacaaata atcctttgaa
     1081 aataatggtt tatcctcaag aaaactctcc ttatgccgcc atacgccgcc tgccggcgca
     1141 agataacctt tgccaatttg cagaatttac gttaacctta cgttttacgc acccatagct
     1201 cagttggaag agtgtcagtt tccgaagctg gaggtcacag gttcgatccc tgttgggtgc
     1261 gccaattata aagagaccgt ctgaaagata aatatttttc agacggtctt ttgacttact
     1321 tcaaactctt atttcaagac ttccgcaaat gcgcgggcaa catagtcggt attcgacgta
     1381 ttcagtccgg cgacgcacat cctgccggaa tccagcaggt aaacggcaaa ttcgtcgcgc
     1441 agcctgcgga cttgttccac gctcaatcct gtgtagccga acatgccgcg ctgtttgatg
     1501 aaataagtga aatcgcgatc ggggatttgc gcagttaaga catcataaag tttctgccgc
     1561 atcgcacgga tgcggtcgcg catcatataa acctcgtttt gccacaaggc gtaaagttcg
     1621 gggctgttca tcacgtcggc ggcgatatac gcgccgtgcg cgggcgggct ggagtagatg
     1681 cggcggacgg tgaatttgag ctgtccgaac accaaatccg cttcttcctt attcgggcaa
     1741 accacgctca ggccgccgac gcgctcgccg tagagcgaca ggttttttga gaaggaattg
     1801 ctgacgaaca agggcaattc catttccacc gctttgcgga cggcgtaggc atcgctgtcc
     1861 aaatcgccgc cgaagccttg gtaggcgatg tccataaacg gaatcagttt gcgcgttttg
     1921 atgatgtgca acacttcgtc ccattgttgt tccgacatat ccacgccggt cgggttgtgg
     1981 cagcagggat ggaggatcag gacgctgttt tcgggcaggg tgttgaaaaa cgcggtcatt
     2041 tcgtcgaatt tcacgccgac ggcagcaggg tcgtaatatg ggtaagtgcc gacctcgaaa
     2101 cctgcgcttt caaaaatgcc gcgatggttg tcccaagtcg ggtcgctgac gtaggcgcgc
     2161 gcttcgggaa accagcggtg cagaaagtcc gccccgactt tgagcgcgcc tgagccgccc
     2221 aaggtttgta cggtaacaat acgtccttgc gcgagcgcgg ggttgtcttt gccgaacaac
     2281 aaatgctgca ccgcgctgcg gtaagtgtct aagccttcca tcggcaggta gggcgacggc
     2341 acaggagtgg cggcgcgggc ggtttcggcg cggctcacgg attccaacac gggcattttg
     2401 ccttcgtcgt cgaaataaat gcctatgctc aaattgactt tttcggggcg cgggtcgttt
     2461 ttgaaggttt cgaccaaact caaaatcgga tcgccgggat agtattcgat gtgtcggtac
     2521 atagtcctta cctcttgctt tttccaagga ttttcttttt caacagcaca ccactttcaa
     2581 tatggtgcgt aaacggaaat tgatcgaaca gggcggcacg ttcaaccgta tgggtttccg
     2641 ccaaggtgtc caaattggta cgcagcgttt cgggattgca ggaaatgtag atgatgttgt
     2701 caaactgcga caccagcttc aaagtttcct catcgatacc ggcacgcggc ggatcgacga
     2761 aaatagtgga aaatgcgtaa tccgtcaaag caataccgcc atccttaagg cgtttaaact
     2821 cacgttttcc ggtataggct tcggtaaatt cttcagcaga cagacgggcg attttgatgt
     2881 tgccgatgcg gttggcttcg atattccatt gcgccgcgct gacggaggtt ttggagattt
     2941 cggttgccaa aacacgttca aacttttcag ataaaggaag cgtaaagttg ccgtttccgc
     3001 aatacagttc gagcaaatcc ccatccaatc cttctgctgc accgcaggcc cattcaagca
     3061 ttttctgaca cacggcggca ttcggttggg taaaactgcc ttcaatttgc cgataacgga
     3121 aatcccggtt gccgaccttc aaagtttccg ttacatagtc ctgttttaag actattttct
     3181 gtcccctgct ccgcccgatg acggaaatat ccaactgttg ctgtaacgct tgcgccgcct
     3241 gcatccactc attatcaagc cttttgtggt aaatcatggt aaccagcatt tccccgctga
     3301 gcgtagacaa aaattcgacg gcataccaac ggtttctcag ttcggcagat tgggcggcaa
     3361 cggcaatcaa ttctggcatc aggcggttga cggcttcgga agccgcttca aaacggtcgc
     3421 aacggatcag gcttgccccg ccagcctttt gtcctttttc aaacatggca taaaacattt
     3481 caccgccttc gtgccaaata cggaactcgg cacgcatacg gtaatgtttg tccggagatt
     3541 cgtacacttc ccactcagga acatccaaac ctgcaaaaag ggttttaagg tggtcttttt
     3601 tatcttgaag ctgctgcgtg tagtcgctca tatcgctatc ctgaaaaatc agaccggatt
     3661 ataagccgat tcactgcaaa acacgcaacc cctttaccgg catataaccc gttttcctcc
     3721 aacttttatg ctaaaatccg ccgtctccaa cataccgccg acagaaggaa aatatggcag
     3781 gcaacacttt cggacaactc ttcaccgtga ccacgttcgg cgaaagccac ggcgcaggtt
     3841 tgggctgcat catcgacggc tgcccgcccg gcttggaatt aagcgaagcg gatatccaat
     3901 ttgacctcga ccgacgcaaa cccggcacca gccgccacgt tacccaacgc cgcgaaaccg
     3961 accaagtaga aatcctctcc ggcgtattca aaggcaaaac caccggcacg cccatcgccc
     4021 tcttaatccg caataccgac cagcgcagca aagactacgg caacatcgcc caaagtttcc
     4081 gccccggcca tgccgactat acctattggc acaaatacgg cacgcgcgac taccgcggcg
     4141 gcggcaggag ctccgcccgt gaaaccgccg cccgcgttgc tgccggagcc gttgccaaaa
     4201 aatggttgaa agaaaaattc ggcacggaaa tcaccgccta cgttacccaa gtcggcgaaa
     4261 aagaaatccg gtttgaaggc tgcgaacaca tttcccaaaa tccttttttt gccgccaacc
     4321 atagccaaat tgccgagctg gaaaactata tggacagcgt gcgcaaatcg ttggattccg
     4381 tcggcgcgaa gctgcatatt gaagccgcca atgtccccgt cggcttgggc gaacccgttt
     4441 tcgaccgcct cgatgccgaa atcgcctacg cgatgatggg catcaacgcc gtaaaaggcg
     4501 tggaaatcgg cgcaggtttt gacagcgtaa cgcaacgcgg cagcgaacac ggcgacgaac
     4561 tgaccccgca aggcttcctg tccaaccatt cgggcggcat cctcggcggc atcagtaccg
     4621 ggcaagacat ctgcgtcaat atcgccatca aacccaccag ctccatcgcc accccgcgcc
     4681 gcagtatcga catcaacggc aaccccatcg aactcgccac gcacggcagg cacgacccct
     4741 gcgtcggctt gcgcgccgcg ccgattgccg aagctatgct cgccttggtt ttaatcgacc
     4801 acgccctgcg ccatcgtgcg caaaatgcgg atgttgccgt ggatacgccc gatatcgccc
     4861 gctcggacaa gtaaaaagat ttagccaaaa cacgggcttt atactaaaat accgaccatt
     4921 gccgtgccgt ctgaacgcac gattcttaga ggaatacaac cgaaatgaca caagaaaccg
     4981 ctttgggtgc ggcactgaaa tccgccgtcc aaactatgag caaaaagaaa cagaccgaaa
     5041 tgatcgccga ccacatctac ggcaaatacg atgtgttcaa acgcttcaaa ccgttggcac
     5101 tcggcatcga tcaggatttg attgccgctt tgccgcaata cgatgccgca ctgattgcac
     5161 gcgtcctcgc caaccactgc cgccgtccgc gctatctgaa agccttggcg cgcggcggca
     5221 aacgtttcga tttgaacaac cgtttcaaag gcgaagttac ccccgaagaa caggcgatcg
     5281 cgcaaaacca tcctttcgtg cagcaggctt tgcaacagca gtccgcccaa gctgccgccg
     5341 aaacgccgtc tgttgaagcc gaagcagccg aatcttccgc agcagaataa atccccaaat
     5401 gaaatgccgt ctgaaaaccg atttggtttc agacggcatt tttccgtatg cggcaatcac
     5461 ggttcaaata tcgagttccg ccgtatcgcc ttcgcgctcc atccaggcac ggcgggcggc
     5521 ggcttcgcct ttgcccatca gtttgacgaa gatgtcgcgc gtctcgtcat ccgcgccttc
     5581 ggggatttgt acctgcaaca ggcggcgggt gtcggggtgc atggtagtat ctttgagctg
     5641 gtctgggttc atctcaccca aacctttgaa acggctgatg gaataagcag tttctttaac
     5701 gccttctttt tgcagccgct ctaaaatgcc gtcaagttcg ttttggtcga gggcgtagaa
     5761 tttgcgggcg ggtttgcttt taccttgtgc gttgacatct acgcggaaca gcggcggctg
     5821 ggcgacgtag atgtgtccgt cagcgaccag tttcgggaag tggcggtaga acagggtcag
     5881 cagcaaaact tgaatatgcg agccgtccac gtcggcatcg gacaggatgg cgattttgcc
     5941 gtaacgcagg ccgcttaaat cgggatggtc gttgatgccg tgcggatcga cgccgatggc
     6001 aactgaaatg tcgtggattt cggcgttgcc gaagagctgg tcggggtgga cttcaaagct
     6061 gttgagcact ttgccgcgca ggggcaggat ggcttgggtg gctttgtcgc gggcgagttt
     6121 ggcggagccg ccggcggaat cgccttcgac gaggaagagt tcgttttcgc ggatgtcttc
     6181 gctttcgcag tcggtcagct taccgggcag gacggcgacg ccgctgcctt ttttcttttc
     6241 aatcttttta accgaacgca tccgcgcctg tgcctgacgg atggcgagtt cggcgatttt
     6301 tttgccgaag tccacgtttt ggttcagcca caattccaaa gggtcgcccg atacggtagc
     6361 aacgagtttc agcgcgtcgc ggttggtcag tttgtctttg gtctgacctt ggaactgcgg
     6421 gtcgaggaca cgggcagaga ggacaaaggc ggttttgccg aacacgtcgt cgctttgcac
     6481 tttcacgccg cgtggtaaaa ggttgtgcag attgatgaag ttgctgacgg cgttgaacac
     6541 ggcttgtttc aagcccgctt cgtgcgtgcc gcccagcggg gtggggatga ggttgacgta
     6601 gctttcgttg gcgcacgagc cttcttccag ccaggtcagg gcaaacgcgg cgccttcgcc
     6661 gatgctgaaa tcgccgttgt ggccgtctga aatgtagttt tcgcaagaga agataggcac
     6721 ggcttcctgc gcgtcggcaa tcaggtcggt cagatagctt ttcagaccgt cggggtaatg
     6781 ccaggtttgg gtgtgcgctt cgtcttcgcc tttgaccgga cgggtcaggg aaacgcgcac
     6841 gcccggcagc agcacggctt tggcgcgcag caggcgttcg agttcgggaa tgctgtaatt
     6901 cgggctttca aaatatttgc cgtccggcca cacgcgcact tcggtgccgc tgtctttgac
     6961 ggcgcatttg cccacttgtg ccaacggttc gaccacgtcg ccgccggcaa acacgatacg
     7021 gtggattttg ccttcgcgtt tgaccgttac ctcaaggcgg gtggaaaggg cgttggtcac
     7081 ggatacgccc acgccgtgca ggccgcctga aaaggcatac gcgctgccgc cgtctttttt
     7141 gttgaacttg ccgcctgcgt gcagacgggt gaacacgagt tcgactacgg gtacgccttc
     7201 ttcagggtgc agaccgacgg gaataccgcg gccgttgtcg cgtacggaaa gcgaaccgtc
     7261 ttcatgaatt tgcacgtcga ttgccgtagc gaaaccgccc aacgcctcgt ccgccgcgtt
     7321 atcaatcact tcctgacaga tatgggtcgg gctgtcggtg cgggtgtaca taccgggacg
     7381 ttctttgacc ggttccaaac ctttgaggac ggtgatgctg gattcgctgt attggttgtt
     7441 tttagccata ggaataatct gaaagtaaga aaaacaacgc tttcagacgg cctgaaagcg
     7501 ttgcgttccg ttgttttacc ggttgccgga aggttggcgg gcggcaaagt cttcataact
     7561 ttccataccg cgcaggaagc gggaagagag ttctttcaac gcccccaaat aaacgtcgcg
     7621 tttgaactcg atgacttcgt caacgggcgc ccaatattga tgccaacgcc agccgtcaaa
     7681 ttcggggtgg cgggtggcgc gcaggttgac atcgcaatcc cggccggtca ggcgcaggag
     7741 ataccaaatc tgcttctgcc cgcgataaga tccgcgccat tcgcggcgca cccagttgtt
     7801 cggcacgtcg taacgcagcc agtcgcgcgt ccgcccgacg attttgacgt gttgcggcag
     7861 aagtccgact tcttcgtaaa gctcgcggta catcgcggtt tcggggcttt cgcccggctt
     7921 gatgccgcct tgcggaaact gccaagaatg ttcgcgcacg cgcttgcccc aaaagacttc
     7981 gttacgttcg ttaatcagga taataccgac attggggcga tagccttccc tgtccaacac
     8041 ggtgtcgccc tccgttaaat tcaatcgtac gattttccca caaatcgggc ggttttgaca
     8101 aatcagacgg catggttcaa gcatgtcgaa acacagacgg actcgggaaa atatcttaaa
     8161 tttggtttac aataatgtgt ttcaaattat tcgggaatca gaccatgtta gatatccaat
     8221 tgctccgcag caacaccgcc gctgtggcgg aacgcttggc ggcgcgcggt tacgagtttg
     8281 atgccgcgcg tttcaatgcg ctggaagaac aacgcaaagc cgtccaagtg aaaaccgaag
     8341 aactacaagc ctcgcgtaac agcatttcca agcaaatcgg cgcactgaaa ggtcagggca
     8401 aacacgaaga ggcgcaggcg gccatggatc aagtcgccca aatcaaaacc gatttggaac
     8461 aggctgccgc cgatttggat gccgttcaaa aagaattgga cgcatggttg ttgagcatac
     8521 ctaacctgcc gcacgaaagc gtacctgccg gtaaagacga aaccgaaaac gtcgaagtcc
     8581 gcaaagtcgg caccccgcgc gaatttgact ttgaaatcaa agaccatgtc gatttgggcg
     8641 aacctttggg tttggatttt gaaggcggtg caaaactctc cggcgcacga tttaccgtga
     8701 tgcgcggaca aatcgcccgt ctgcaccgcg ccttggcaca gttcatgctg gatacgcaca
     8761 cgctgcaaca cggctacacc gagcattaca cgccttatat cgttgacgat acgacgctgc
     8821 aaggtacggg ccaactacca aaatttgcgg aagatctgtt ccacgttacc cgtggcggcg
     8881 acgaaaccaa aaccacccaa tacctgattc cgacagccga agttaccctg accaataccg
     8941 ttgccgacag cattatcccg tccgaacaac tgccgctgaa gctgaccgcg cattcgccct
     9001 gtttccgcag cgaggcgggt tcgtacggca aagacacgcg cggtctgatt cgccagcacc
     9061 agttcgacaa agtggaaatg gttcaaatcg ttcatcccga aaaatcatac gaaacgctgg
     9121 aagaaatggt cggccatgcc gaaaacatcc tgaaggcttt ggaactgccc taccgcgtga
     9181 ttaccctgtg taccggcgac atgggcttcg gcgcggcaaa aacgtatgac ttggaagttt
     9241 gggtgccggc gcaaaatacc taccgcgaaa tctcaagctg ctccaactgc gaagatttcc
     9301 aagcccgtcg catgaaggcg cgtttcaaag acgaaaacgg caaaaaccgc ttggtacata
     9361 ctttgaacgg ctccggtttg gcagtcggca gaaccttggt cgccgtgttg gaaaaccatc
     9421 aaaacgccga cggcagcatc aacatccctg ccgcactgca accgtatatg ggcggcgttg
     9481 ccaagttgga agtgaaataa gccttaaccc tgaacataaa tgccgtctga aacttggttc
     9541 agacggcatt tcctttaaac ttttaaaaca cgtcagccgt cggcacgaac cgcattgccg
     9601 caatcgccgg tctgtccgac ctcgcggata ttggacagcg taacttccga aatattaccc
     9661 aacgcctctt ccgtcaaaaa tgcctgatgg ccggtaaaca gcacattatg acaagacgac
     9721 aggcggcgga acacgtcgtc ggtaatcaca tcgttggatt tgtcttcaaa aaacagctcg
     9781 cgctcgttct cgtacacatc catgcccaat gcgccgattt tccggcgttt caacgcctca
     9841 atcgcggcgg cactgtcaat cagcccgccc cggctggtgt tgataatcat cacgccgtct
     9901 ttcattttgt cgaacgccgc ttcgttcagc atatagtggt tttccggcgt ggaggggcaa
     9961 tgcagcgtga tgatgtccga ctgggcatac agctcgtcca aatccacata ttttccgccg
    10021 agtttttcca cttcggggtt gcaaaacgga tcgtaagcca gcaggttcat accgaaaccc
    10081 tttaaaatcc gcatcgttgc gataccgatt ttccccgtgc cgataacgcc cgccgttttg
    10141 ccgtacatat tgaaaccggt cagaccttcc agcgaaaaat tcgcatcgcg ggtacgctga
    10201 taggctttgt ggatacggcg gttcaacgtc agcatcagac cgaccgtatg ttccgcaacc
    10261 gattcgggcg aataggcagg cacgcgcacg actttcaagc ccaactcttc agccgccttt
    10321 aaatccacat tattgaagcc ggcacaacgc aacgccacag ttttcacgcc aatttgcgcc
    10381 aatttttcca acacgggccg gctgccgtcg tcgttcacaa aaatacagac cgcctccgca
    10441 ccttccgcca ttttcgccgt tttcgcatcc agcataaaat caaaaaactc cagctcgaag
    10501 ccgaaatgcc ggttggcgcg ggtaaaatgt tcgcggtcat agcttttcgt accgtaaatc
    10561 gcaatcttca tcaatatgtc cagttgtcgt ctatggttga gaaacggcat aatacactga
    10621 attcaaacaa atcagtagaa tatggtggat taaaattgat tgcatgcacg gcatttccat
    10681 ttcaaaacac aaaactcaat cgcccattgc cgccagaagc tccgcctgat gctcggcaat
    10741 cagggcatcg gtgatttctg ccaaatcgcc gtccatcaca aaatccagct tgtgcagggt
    10801 gaggttgatg cggtggtctg ttaccctgcc ttggggatag ttgtaggtgc ggatgcgttc
    10861 gctgcggtct ccgctgccga tgagggattt gcgttcggcg gcttctttgg cttgggcttc
    10921 gcgtttttgc gcgtcgttca ggcgggcggc gaggactttc atcgcctgcg ctttgttggc
    10981 gtgttggctg cgtccgtctt ggcattcgac caccatgcct gtgggcaggt gggtgatgcg
    11041 gacggcggaa tcggttttat tgatgtgctg cccgcccgcg ccggatgcgc gaaaggtgtc
    11101 gatgcgaagg tcgacggggt tcaactcgat gtcttccagt tcgtccgctt cgggcatgac
    11161 ggcaacggtg caggcggagg tgtggatgcg gccttggctt tcggtggcgg ggacgcgctg
    11221 cacgcggtgt ccgcccgatt caaatttcaa acggctgtac gcgcctaagc cgataatacg
    11281 ggcgataact tctttatagc cgcccaactc gctttcgttg gcggacacga tttcaacctg
    11341 ccagcggttg cgttcggcgt agcggctgta catacgcagc aaatcgccgg caaacagcgc
    11401 ggcttcgtcg ccgcccgttc cggcgcgtat ttcgatgaag atgtttttgt cgtcgtcggt
    11461 atctttgggc agcagcagtt tttgcaattc ggtatcgagt gcgccgattt tggctttcgc
    11521 cgcttcgatt tcttcggcgg caaagtcttt catttcgggg tcggacaaca tttcttcggc
    11581 atccgccaaa tcgctttgcg ccagttgata gttttggaat acttcgacga cgggggtcag
    11641 ttcggcgtgt tcgcgcgtga gcttgcggta gttgtccata tctgccgtgg cttcgggttg
    11701 ccctaaaagg tgggtaactt cttccaaccg gtcgccgagt tgttgcagtt tttctaagat
    11761 agacggcttc ataattcttc cataacaaac gccgcctgaa tttcagacgg catcaaaacg
    11821 cggtcattat aatatatttt ctgaatattc aaaaagataa tctagggacg gagcaggctg
    11881 tcggcattgc gttccgttat cgcggcgatg tccgccacgc cgacaccgcg tatctgcgcg
    11941 gcaatttcgg caatccaaag aatattggca ggcgtattaa tctctttttt cagcataaac
    12001 gggctgtcgg tttccaatac gaaatccccg tcgttcaagg ctttaagcgt atcgcgcact
    12061 ttacgcgcgt tcggattgag caacaacgaa ccgatgccga ttttgaaacc cagtttcgtc
    12121 aacacgcgcg cttcttccgc gctgcctgag aaggcgtgaa cgatgccgcc ttgggcaaag
    12181 cctgtctgtt tgacggcggc ggcgatgtcg gcggtggctt tgagattatg gataatcacg
    12241 cggcggcgca gggtttgcgc gatggcaagc tggcggacga aaacttggat ttgccgttcg
    12301 cgctgcggcg gcgtttgggt tttgtcgtaa aaatccaagc cgatttcgcc gacccatgcc
    12361 tgcggataac gtgccaacat cgcttccagg cggacgcaat cacgctcggc aatgccgtct
    12421 gaaaaccaag gatggatgcc gagcgcaata cggatttgac cgtgttcgga cggcatttcc
    12481 gacagttccg ccacgctttg ccaatcctgc ggacaggtgg cgggaacgat aaaccgcttc
    12541 accccaactt tccgcgcggc ggtcaggatg tgcggcaggt tttcgcgcag ggcggcatcg
    12601 gcaaggtggc agtgggtgtc ggtgaagttc atttcgattc cgcaatgcgg caggttcaca
    12661 taaaaataag gcagggcagc aagggatgcc gtgtacgggc ggcgcataag gcgcggtcaa
    12721 cgccccgtca ttgccatttc aatccgctat aacttcagtc ttgccaactc tttttccacc
    12781 tcttccttac cccagccttg cgatacggcg agggtcatga gtgcggtggc ggtttcgagg
    12841 ttgcatttgc cgccgttgat gatgcctgag ttgcggaacg cgttgccttg cgcgtaaacg
    12901 gcagcggttc tgccttgtcg gacttggctg atgttgagca gcagcctgcc ttgctgcgta
    12961 aagtcttgca cggcgcggat gaaaccttcg tctgcgggcg tgttgccgtg tccgtaactt
    13021 tgcaggataa gggcgtgggc gggaagctgt ccgagtccgt cggcaagttc ttggacggca
    13081 aagccgggaa taagcgtgcg gacggcgatt tttgcctgcg ggtcaggata gcggattttg
    13141 aggccgtctg aaacggccgc cgcatcttgg gacggaatac gaagattgta ccagccttga
    13201 gtttcatccc attcggcgat gacaccgaaa tgcggattgt cgaagcctgc ggcggtttcg
    13261 gtgctgactt tgctgctgcc gacggcggga taaagtttgc cgtcaaaggc aataagcgtc
    13321 tgcttcaatc cgagtgggaa tgcggcaacg gcagtcgcca gattgcgcgg cgcgtcgctg
    13381 cccacggcgt tgtacggcca ttgggaaccg gtcaggacaa tcggtttgac caaaccctgc
    13441 agcgcgaggg cgaacagatt ggcggtatag gcgagcgtgt ccgtaccgtg cagcaccaaa
    13501 acgccgtcgt actgcggcag cgcggcggca atgatgtcca gccaagcgca ccagttttgc
    13561 agttggacgg cggaagaatc aatcagcgtc ccacaaacgt gccaatcgaa atccatgccg
    13621 tttgaaaacg gcgcgagtgc ctgcccgacc agcgcggtat cggggcgcag gccttcgctg
    13681 ctttgcgtca tgccgatggt gccgccggta taaaggacaa aaattttctg tttcatggct
    13741 catcctgaaa atgcaaagac cgcctgaaac gcgaaatgcg tccggacggt cgaaaatctg
    13801 atttactgct gcttctgtgc cgcttttttc gctgcctttt ccgccttgcg tttggcgcgt
    13861 ttttcgctca attgtgcgcg gtaaagctga taatgtcggc gtttgcgcca ccagaaccaa
    13921 gccagcgccg ccgccagcac gcccaatgcg atgaagatgc cggattgcag gctgtgcatt
    13981 ttcgccatca gccaatcgat gttgtgcgcg ccgtactcgc ccaagtaaat ccaaacgggc
    14041 acggaaatca gcgcggcaag cccgtccata atcagaaagc gcagatacga tactttgcgg
    14101 ctgatgccgg cggtaacgaa aacggcagtc cgcaaacccg gcaggaagcg ggcgacaaac
    14161 agaacccagt tgccgtattt gtcgaatttt tcctgaacct gtgcgtaacg tttcggcgtc
    14221 atgatgcgcg caatcggttt gaacttgagg attttctgcc cccaaattcg tccggcggcg
    14281 aacatgatgc cgtcgcccgc caacacgccg agcataccga ctgcaaacat aatatgcgga
    14341 ttggtataac ccatacccga aatcacgccg cctgttacca aggtcaaatc ctcgggaatc
    14401 ggcacgccga aaccgcagat gaccaataca aaaaaaacag ccgcataacc gtattcgaca
    14461 aaaaaggctt ctaaaaaagc aaacatggcg gatattccat tgtcggagat aaaaagtcag
    14521 aacaaaccga aacattttct acatgaagca ggcattctat caaagattat gccgtctgaa
    14581 agcggaaaaa aggcagattc gcatatcctc cgcatgttca gacggcattt aaacagaaaa
    14641 ccggccggtt ctgaaaacgg tttttcctga ttttgcctaa aggctgccga tggcggaagc
    14701 aatacgttcc gccccttcgc gcgcccaatc ggcctgtcgt gcctcaacca tcacacgcac
    14761 gacgggttca gttcccgaag cgcgcaacac aacccttcct ttgccttcga gttctttttc
    14821 cactttggcc aacacgtctt tcgaagcctc ctgccatttc tgaccctttt ggatgcgcac
    14881 gttaatcata gtttgcggat acggctgcca gtcggcgcaa acggtggcga ggtcttggtt
    14941 caggatttgc agcgccgcca aaacttgcag cgcggaaata atgccgtcgc cggtgttatg
    15001 tttgtccatg cacaaaatat ggccgctggc ttcgccgccg atgagccagc cgcgttggtt
    15061 caactgttcc aacacatagc ggtcgccgac tttggcgcgg cagaaatcga cgccctgctc
    15121 tttcagggcg atttccatcg ccatattggt catgaccgtg ccgaccacgc cgccgatgtt
    15181 gataccttct cgggcgcggg ctttggcgat gacgtaaatc aggctgtcgc cgtcgtaaac
    15241 cttaccgttt ttatcgacca tcatcaggcg gtcgccgtcg ccgtctaagg cgatgccgta
    15301 gtcggcttca tgctgtaaaa cggcggcctg gagtgtcttg gtataagtcg caccgcattt
    15361 ctcattgata ttgtagccgt tgggttcgtc gccgatgctg acaacctgtg cgcccagttc
    15421 gtgaaacacc ttgggtgcaa caccgtaccc cgcgccgttg gcggtatcga caaccaactt
    15481 caaaccccga aggtcggaat ggctggggaa ggtggatttg caaaattcga tatagcggtc
    15541 gtccgcaccg ctgatgcggc gggcgcgtcc gaggcgtgca gaaggctggg ttttcatttc
    15601 ttcgtcgatt ttggcttcga tttccaactc gatttcatcg ctcagtttca cgccgccctc
    15661 ggcaaagaat ttgatgccgt tgtcggaata ggcattatgc gacgcggaaa tcatcacacc
    15721 ggcggacaaa cgcagcgcac gggtcagata agccacgccg ggcgtaggca gcggaccggt
    15781 ttggataacg ttgacacctg cggcggtaaa acctgccacc aaagcagctt ccagcatata
    15841 accggaaata cgcgtatcct tgccgattaa aacggtcggt ttctggtcgg tgtcgtgctg
    15901 aaccaaaacc tgacccgccg catagccgag tttcaataca aaatcgggcg taatcggaaa
    15961 ctgcccgact tcgctgcgca cgccgtccgt gccgaaatat ttttttgcca tgtgttgctc
    16021 cgagaatgtg aaccgttgtc cgagattata cagtcagttt gtgccttgct gtctgcaccg
    16081 ttgatgccgt ctgaaaccgc cccgtccttt tcagacggca tgaagtatgt gaaccgctgt
    16141 ttacagattg atgcccaacg cttcccacac cttcaacgca tccgctgtcg ccttcacatc
    16201 atgcacccgc acgatttgcg cgccgcgcgc tacggaagcc aacgctgccg ccacgctgcc
    16261 gtgtacgcgt tccgccgcat ttgcctcgcc ggtcagctcg cctatcgtgc ttttgcgcga
    16321 tacgccgatg agcagcggaa aacctgtttc cgccatcaat tcgggcaaat gccgcatcag
    16381 cgcgatattg tgttgcaagg gtttgccgaa gccggagccg aagccggggt cgagtatgat
    16441 gcgttgcggt gcgatgcctg ccgcgataca ttccgctgag cgcgctttca aataccgcgc
    16501 tacttcaccg acaacatatt gatatttcgg attaatctgc atggttttgg gcaaaccctg
    16561 catgtgcatc aggcaaatgc ccgtgtccgc ctgacgcgcc agcaattcga ccgcgccctc
    16621 gtcattcaac gccgccacat cattaataat atcgacgccg ccgagtgcca acgctttttc
    16681 cataatcacc gtgcggcgcg tgtccaaact gatgggaacg ccccaccccg ccacttccgc
    16741 caaaacaggc tcaacccgcg cccattcttc ttcaggcgaa acataatccg cacccgaccg
    16801 cgtcgattcg ccgccgatgt cgagaatgtc cgcaccctct ttcaaaagcc gttcggcgtg
    16861 cgccaaagct gtttgggcat tttgcgaata cgcgccgccg tcggaaaaag aatcgggcgt
    16921 gagattcacg atacccatga ttttcggttt gtccaaaccg atttcaaacc gtcctgcctg
    16981 ccaaacgtgt cgtgccatct gaactcctcc caaaataaaa aacagattat atgccgtctg
    17041 aaaccgtctt gtgcgcttca gacggcaccg ctattcaggc ggcagacggc atgttgtccg
    17101 aatgtctgct ccgcctttga atctgccggt atgcctgcta tccgcccgac ttttcaaaac
    17161 aggttccgac gattccgcac gcgcctgccg cctttgccaa gccgtacagg atttcctgcg
    17221 gcatatcgcg gttccataat cccgtaatat tcgcaatcac gggcagatgg ctgatttggc
    17281 ggactttcac gatggattcg acatccaaac ggtagggatg gtctttggta tggctcaaca
    17341 cgcccgactc gcccagaatc aggtggcggt tgccgcgcga gacaacatat tctgcggcat
    17401 tcaaccaatc ttcggcagaa tggtgcttgt ctttacacag caccaaggga atgttcaggc
    17461 ttccggcttc attcaatacg gcaagatcgg acatcagccc gccgcccaaa tacaggatgt
    17521 ccgcccccgc attcaaagcc gcttcgacat ggcggacgtt gcggacgcgc accaatacgg
    17581 gtttccctgc gccatgcgcc gatgcggtct gttccgccaa ccgtctgcac cgtcctcgcc
    17641 cttcatccgc acttgaagtg tcgtataagt ttgccgaagt gaaaaacgga tctagaaaca
    17701 ctgcatccgc attgcgccat actgacggtt ctgcggcgat acagacggtt tccccgccgc
    17761 cgaaagccac gcctttggcg gcaacgcggc tgtcttccgc ccgattttcc cgactgacgg
    17821 ttttccatgt atccaaaatg cggacggctt tctcgacctc cggcagcgtc tgcacctccc
    17881 tgacgctcaa aaccctatcg tcgccgattg cgccgatgac ggtacgctcg tcgccgtgag
    17941 aaatgtgttc tcgcagacct ctgctgcgga taaaggcgac aacgccggca atgtccgctt
    18001 cggcggcacg cctgctcatg acaataatca tatttcctcc tgacacaaga aacggcctgc
    18061 ccaaaatagg atttttgcaa gccgtgttat actgtggcgt gttttacaga ttgttcgggc
    18121 tatggattta ttatcggttt tccacaaata ccgtctgaaa tatgcggtgg ccgtgctgac
    18181 gatactgctt ttggcggcag tcgggctgca cgcttccgta tatcgcacct tcacgcctga
    18241 aaacatccgc agccgcctcc aacaaagcat tgcacacaca caccggaaaa tctcgtttga
    18301 tgcggacatt cagcgcaggc tcctgccccg gccgaccgtc atcctgaaaa acctgaccat
    18361 taccgaaccc ggcggcgacc agactgccgt ttccgtccaa gaaaccaaaa tcggattgag
    18421 ctggaaaaac ctgtggtcgg atcagataca gattgaaaaa tgggtggttt cgagtgcgga
    18481 acttgccctg acgcgcgacg ggaaaggtgt ttggaacatc caagacctga tcgacagcca
    18541 aaaacgccaa gcctcagtca accgcattat cgtcgaaaac agcaccgtcc gcctcaattt
    18601 cctgcaggaa cagcttatcc tgaaggaaat caacctcaac ctgcaatccc ccgattcgtc
    18661 ggggcagccg tttgaaagtt cgggcatact ggtttgggga aagctgtccg tcccgtggaa
    18721 aagcaggggg ctgttccttt cagacggcat cggcacgccc aaaatctcac cgttccattt
    18781 tgaagcttcc acttcgctgg acggacacgg cattaccatt tccaccaccg gcagcccttc
    18841 tgtccgcttc aacgccggcg gagcggatgc cgccggcctc ggcctgcgtg cagacacttc
    18901 cttccgcaac ctccacctga ccgcccaaat ccctacgctg gcactcagaa ataacagcat
    18961 taaaattgaa accgtcaacg gcgcatttac cgccggcggc gaatatgccc aatgggacgg
    19021 ttcgttcaaa ctcgacaaag ccaaccttca ctccggcatc gccaacatcg gcaacgccga
    19081 aatctccggc agcttcaaaa caccgcgcca ccagaccaac ttctccctca attcgccgct
    19141 cgtatggacg gaaaacaaag ggctggacgc gccgcgcctg tatgtatcga cccttcagga
    19201 taccgtcaac cgcctgccgc aaccccgttt catcagccgg ctcgacggtt cgctgtccgt
    19261 accgaatctg caaaattgga atgccgaatt aaacggcaca ttcgaccgcc aaaccgttgc
    19321 cgcgaaattc agatacacac atgaagacgc accgcatctg gaagccgccg tcgcactgca
    19381 aaaattgaac ctgaccccct atcttgacga cgtgcggcaa caaaacggca aaatatttcc
    19441 cgacaccctc gccaagctgt ccggcgacat cgaggcgcac ctgaaaatcg gaaaagtcca
    19501 acttcccggc ctgcaactgg acgatatgga aacctacctc cacgccgaca aaggccatat
    19561 cgcgctcagc cgtttcaagt cagggcttta cggcggccat accgaaggcg gcatcagcat
    19621 cgccaacacc cgtcccgcca cttaccgcct gcaacagaat gcaagcaaca tccaaatcca
    19681 accgctgctg caagacctgt tcggcttcca cagcttcagc ggcaacggcg atgcggtcat
    19741 cgacctgacc gcgggcggcg aaacccgaaa agagcttatc cgctcgcttc agggcagcct
    19801 gtcgctgaat atttccaacg gcgcgtggca cggtatcgac atggacaata tcctgaaaaa
    19861 cggcatttcg ggcaaaactg ccgacaatgc cgcacccagc acacccttcc accgattcac
    19921 gctcaacagc gaaatttcag acggcatcag ccgccacatc gataccgaac tcttctccga
    19981 cagcctctat gttaccagca acggctatac caatctggat acgcaggaat tgtctgaaga
    20041 tgtccttatc cgcaacgccg tccatccgaa aaacaaaccg attcccctga aaatcaccgg
    20101 tacggtggac aaaccgtcca ttaccgtcga ttacggcagg ctgaccggcg gcatcaattc
    20161 gcgcaaagag aaacagaaaa tcctcgaaga caccctgctg gaacaatggc agtggctcaa
    20221 acctaaagaa ccgtaaacat cctgcgtaca aaaatgccgt ctgaaacacc cccgcgcttc
    20281 agacggcatg accgtaaaac ctacaacccc aattcctccc aaatcccatc aatcttagcc
    20341 gtaaccgcag ggtctttttt gatgacgcgc ccccattcgc ggtcggtttc tcccggccat
    20401 ttgttggtcg catccaaacc cattttgccg ccgagtccgc taacggggct ggcgaagtcg
    20461 agataatcga tgggcgtgtt ttctaccaaa acagtgtcgc gcacggggtc catgcgcgtg
    20521 gttaccgccc agatgacttc tttccagtcg cgcacgttca catcgtcatc caccacgatg
    20581 atgaatttgg tatacataaa ctggcgcagg aacgaccagc agcccatcat cacgcgcttg
    20641 gcgtgtccgg cgtactgttt tttcatgccg atcaccgcca tgcggtagga gcagccttcg
    20701 ggcggcaggt aaaaatcggt gatttcgggg aactgctttt gcaaaagcgg tacgaacact
    20761 tcgttcaacg ccacgcccaa aacagcgggt tcatcgggcg gtttgcctgt gtaggtcgaa
    20821 tggtaaatcg ggttttcgcg catggtgatg cgctcgaccg taaatacagg gaaatgatcc
    20881 tgctcgttgt aatagccggt gtggtcgccg tatgggcctt ccaacgcggt ttcgttcgga
    20941 tgaatcacgc cttccaatac aatttcagca cgggcaggca cttgcaaatc gttgccgata
    21001 catttcacca gctccgtccg cgaaccgcgc agcagtccgg caaactggta ttcgctcaaa
    21061 gtatcgggaa caggcgttac cgctccgaga atagtggcag ggtcgcaacc gagcacgacg
    21121 gcgacgggat acggcgtatc gggattgagt ttgcggaact cctgataatc caacgcgccg
    21181 ccgcgatgcg acagccaacg cataatcagc ttgtttttgc cgatgagttg ttggcggtaa
    21241 atgccgagat tttggcgttt tttgtgcggc ccgcgcgtta cggtcaagcc ccatgttacc
    21301 agcggcgcaa cgtcttccgg ccagcaatgc tgaatcggaa gtttatataa atcaacgtct
    21361 tcgccttccc acacgatttc ctgacacggc gcgtttttca ccacgttcgg cgccatgctc
    21421 caaatgtctt tcaagagcgg cagtttggaa aacgcgtctt tgatgccttt gggcggttcg
    21481 ggttctttca gatacgccag cgtctgcccg atttcgcgca gcttggacac gctgtccgcg
    21541 cccatgccca tcgccacacg ttcgggcgtg ccaaacaaat tcgccaacac aggataatcg
    21601 tagcgcgtac cgtcgggctt aatcgggttt tcaaacaaca acgccggccc ttcggcgcgc
    21661 aacacgcggt cggcgatttc ggtcatttcc aaatgcgggg aaacaggatg cgcgacgcgc
    21721 ttgagtttgc cctgttgctc gagcatagcg atgaagtcgc gcaggtcttt gtatttcata
    21781 ttcatccttt ttgtcctttt atcctgagca atccgattcg gataccgccc ctatccttgc
    21841 ctgcgcttcg gcatattcta tgccgtgata aaagtcgcgt accagcggat gtccgccact
    21901 ttgatgaagt tgcagcaaag ggcgttggtt gtcggactgg gtaacgacat tgcagtgcag
    21961 accgaaggtg tcggtttcat aagggggcag ccagttgcag atcatgccga aataaacgac
    22021 gttttccgga ttgtcgtgaa agtggctttg atagtcgtta aaactctttt cactgacaga
    22081 tacccatacc ccatattcca gcgtttcctc atgcccgata atcggaataa gcagcaccgc
    22141 gcggataaaa cggtcggttt ggtcgggata gcggatgatg cagaaatcag aatcacattc
    22201 cgcttgataa gcaatgcgtt cttcttcact gagttgatta tagggatagg gggcggtaaa
    22261 gccgattgcg ggcatatctt catgtttttc gccgcaggaa gtgcaagtgt acataaggtt
    22321 tcagactttc aaaacgagtt tgcggtaaag ccattcgccg gcaaacggca tccccatcaa
    22381 tacataggca atcacgccgg tataaaccgc ccaccaatca tatcgcccca accgtgccaa
    22441 caaagcggca agcgtcccgt tgattataaa aaatacgcac caaacctgcg ttacccggcg
    22501 ggtatagcgc acggcttttt caggcaggtc gggctgttgc agccgcgcaa gtttttcaat
    22561 caccgtctgc ccggcaaaca ggcttccccc gaacaccgcc aacatcatca gattgacgag
    22621 gacgggatac caatacattg agtcgcgccg cccgaacacc aatactgcgg caaaaaacag
    22681 tgtaataaac aaagccgcat aacgctgttg gggcaatttg gcagtcaggg cgcgcagcag
    22741 ccacaacccg cacatcgccg ccgccagcca gacaaaccag cccgcctccc tgccgtaatg
    22801 atagtggatt aacaaaaacc agtacagcgt tgcctcgcct tgccgtacta tctgcggctt
    22861 cgtcgccttg tcctgatttt tgttaatcca ctataccaca aagcgggata ggcaatgctt
    22921 aatacggtca gaaaaatatg tccgaaaaaa ccgggtttca ttttgaatcc gcacaaatgt
    22981 tttcagacgg catccgataa aaacatgccg tctgaaaaat aattagaaat acccgattag
    23041 cccgcctgaa tcttcaatac cgcctgtacc acgtcgttga cggtgcggac attgcggaaa
    23101 tcttcagcct gcagcttgcg ggctgccaca gccattcacg attgcgatat acccggcggc
    23161 attcccgact gccgttcagc agaaagcgca cccattccaa accgctccaa tatgcctcgg
    23221 gcagcatacc ggcttcagac ggcatatcgt ccgaagcaga taaagtcagg ctgtaacgcg
    23281 tccctttggt cagaaccatc gccaaagcat aagcaaacgg cgcgcgcgtt gccgatacgg
    23341 catatccttc cggcagcgga tcgtccgccg ccaaaaccaa aaccgacccg catccctctt
    23401 ccaacagtga tgccgcttcc gccaatgccg tttccacacc gtcggcacac acggccaatg
    23461 ccgtctgctc gctcatatcc cgcctcaata tcgaccatta ccccgccgtt gcattgtgca
    23521 ccgacaaacc gaacgaagtc ggcgacacgg tttgcgattt caacagttcc aaccacaaat
    23581 cgaaactgcg cgacatttcc ccgtcgtgcg aggcataaac tatagtggat taaattta
//
LOCUS       DAWEYF010000010        22547 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.010, whole genome shotgun sequence.
ACCESSION   DAWEYF010000010 DAWEYF010000000
VERSION     DAWEYF010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22547
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.010"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..380)
                     /locus_tag="WGN93_000295"
     CDS             complement(<1..380)
                     /locus_tag="WGN93_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226259.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
     gene            complement(438..803)
                     /locus_tag="WGN93_000296"
     CDS             complement(438..803)
                     /locus_tag="WGN93_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226260.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(785..1333)
                     /locus_tag="WGN93_000297"
     CDS             complement(785..1333)
                     /locus_tag="WGN93_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226261.1"
                     /translation="MKKQITAAMMILTMIAAPAMANSMDNQIFENQVFHTRADAPMQL
                     AELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIP
                     GGVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPG
                     QGIGRHRPWESKSTDRSWKNRF"
     gene            complement(1496..1767)
                     /locus_tag="WGN93_000298"
                     /pseudo
     CDS             complement(1496..1767)
                     /locus_tag="WGN93_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2329..2802)
                     /locus_tag="WGN93_000299"
     CDS             complement(2329..2802)
                     /locus_tag="WGN93_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226262.1"
                     /translation="MKKQITEATMMLSIIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(2890..3114)
                     /locus_tag="WGN93_000300"
     CDS             complement(2890..3114)
                     /locus_tag="WGN93_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226263.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQESSGKTEEPSYFLMFMFL
                     NLLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            complement(3385..3672)
                     /locus_tag="WGN93_000301"
     CDS             complement(3385..3672)
                     /locus_tag="WGN93_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226264.1"
                     /translation="MDDLIAAFLGYLSGKYSEGKISRLEISLTAGSIFFAVFFIHELI
                     IFIVDGNKENLWSFITGIMKDLFLFSCSVCLLFYFLLFIAETIRKTINKIK"
     gene            complement(3984..4355)
                     /locus_tag="WGN93_000302"
     CDS             complement(3984..4355)
                     /locus_tag="WGN93_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226265.1"
                     /translation="MRFYIDNKECDYIFFRKAVNISDDFIQSGFITPEGLITKNSNPK
                     LFNQYSKMVSKNKCQYEMVTFLSDEMKNIIELLSNDDAYIEFAYSEDFYVLPEIKIDK
                     RTLKSLNFYIDFGVKYIINKI"
     gene            complement(4491..4934)
                     /locus_tag="WGN93_000303"
     CDS             complement(4491..4934)
                     /locus_tag="WGN93_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226266.1"
                     /translation="MKKQITSAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAAAPLVAIGILHAGRFLAQRWVTQRVAAQALSRGANVYARTSQQAR
                     AVANQAWGRQNVIRHGQKEIHSNYSHFQNSSQKIRGHAFYGNKHR"
     gene            complement(4977..5846)
                     /locus_tag="WGN93_000304"
     CDS             complement(4977..5846)
                     /locus_tag="WGN93_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ0226267.1"
                     /translation="MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGTQPDRIDGKKETARNTSTYAHFGTGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            6010..6933
                     /locus_tag="WGN93_000305"
     CDS             6010..6933
                     /locus_tag="WGN93_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ0226268.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSRESEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     SNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(7011..7652)
                     /locus_tag="WGN93_000306"
     CDS             complement(7011..7652)
                     /locus_tag="WGN93_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ0226269.1"
                     /translation="MQKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCIAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(7707..8498)
                     /locus_tag="WGN93_000307"
     CDS             complement(7707..8498)
                     /locus_tag="WGN93_000307"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ0226270.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLNVFEGRVLELPAKSHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFHL"
     gene            8664..8739
                     /locus_tag="WGN93_000308"
     tRNA            8664..8739
                     /locus_tag="WGN93_000308"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8697..8699,aa:Thr,seq:tgt)
     gene            8774..8849
                     /locus_tag="WGN93_000309"
     tRNA            8774..8849
                     /locus_tag="WGN93_000309"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8807..8809,aa:Thr,seq:tgt)
     gene            8991..9782
                     /gene="panB"
                     /locus_tag="WGN93_000310"
     CDS             8991..9782
                     /gene="panB"
                     /locus_tag="WGN93_000310"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ0226271.1"
                     /translation="MITVNTLQKMKAVGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            9905..10741
                     /locus_tag="WGN93_000311"
     CDS             9905..10741
                     /locus_tag="WGN93_000311"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ0226272.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLEKRAVQSLTEYGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            10906..12744
                     /locus_tag="WGN93_000312"
     CDS             10906..12744
                     /locus_tag="WGN93_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226273.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVVKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTEEQRSRAALTAAMMYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLTDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            12884..13465
                     /locus_tag="WGN93_000313"
     CDS             12884..13465
                     /locus_tag="WGN93_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ0226274.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            13475..14320
                     /gene="ispE"
                     /locus_tag="WGN93_000314"
     CDS             13475..14320
                     /gene="ispE"
                     /locus_tag="WGN93_000314"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ0226275.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRDSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            14328..14403
                     /locus_tag="WGN93_000315"
     tRNA            14328..14403
                     /locus_tag="WGN93_000315"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14361..14363,aa:Gln,seq:ttg)
     gene            14416..14491
                     /locus_tag="WGN93_000316"
     tRNA            14416..14491
                     /locus_tag="WGN93_000316"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14449..14451,aa:Gln,seq:ttg)
     gene            14500..14575
                     /locus_tag="WGN93_000317"
     tRNA            14500..14575
                     /locus_tag="WGN93_000317"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14533..14535,aa:Gln,seq:ttg)
     gene            14742..15725
                     /locus_tag="WGN93_000318"
     CDS             14742..15725
                     /locus_tag="WGN93_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ0226276.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            15792..16364
                     /locus_tag="WGN93_000319"
     CDS             15792..16364
                     /locus_tag="WGN93_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ0226277.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(16489..17658)
                     /locus_tag="WGN93_000320"
     CDS             complement(16489..17658)
                     /locus_tag="WGN93_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ0226278.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTLQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTITEKEIVALENVEKRSRWQRLWMRLTGQ"
     gene            17806..19332
                     /gene="ilvA"
                     /locus_tag="WGN93_000321"
     CDS             17806..19332
                     /gene="ilvA"
                     /locus_tag="WGN93_000321"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ0226279.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEQEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(19389..20462)
                     /locus_tag="WGN93_000322"
     CDS             complement(19389..20462)
                     /locus_tag="WGN93_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ0226280.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGQILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(20459..21319)
                     /gene="cysW"
                     /locus_tag="WGN93_000323"
     CDS             complement(20459..21319)
                     /gene="cysW"
                     /locus_tag="WGN93_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ0226281.1"
                     /translation="MKPYSANPNLTEPRWLRVLLTATALGFLLLMLFVPLAAVFYEAL
                     KGGWDLYLKSLSDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGRLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNTV"
     gene            complement(21574..22410)
                     /gene="cysT"
                     /locus_tag="WGN93_000324"
     CDS             complement(21574..22410)
                     /gene="cysT"
                     /locus_tag="WGN93_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ0226282.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPLKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
BASE COUNT         5657 a         5177 c         5840 g         5873 t
ORIGIN      
        1 ctatacatct caatacgata aatatttctt aagtcaaaat gcaagcctga ccgtacctta
       61 actgtcaaaa ttttattatt ttttattgat tttaaaacaa tttctgcaaa attctcttcg
      121 ctttctctct tttttagaag cacataagaa aaaataaaac ttccccgatt aaattcataa
      181 atatgtttca accatttgcc tcctctttct gtaagacaag attcagtttc attcttcctt
      241 attgtataaa tatttccttc acaaaatctg aaataaatcc ataaatccat cttatccata
      301 attaaagaaa aagtttcacc tcgagatttt gtcaacaatt cgcaaggttg cgatgttgca
      361 atcaaatagc cgaaagacat tttttacctc atacatggtc gaaatcagtt tctgttagtt
      421 cagaatccat tttttcgtca acaactgaat ccgcattttt gaattaacgt tttcatcagc
      481 tgccgtttat ctaaaccggc aggttcagtt tcaaaataag ccttatatga agactgtaag
      541 catttcagaa aaagatcatc agaagacata tctgccgaat caaatacaac tgttttgatt
      601 ttggtactta cccaaaaccc tttttgctct ttttctacta tacggaaatt cagaatattt
      661 ccaaccgaat caaaagcacg gtaaacatca tccatcaaat cctgcggctc tattttcttt
      721 tccaattccg acaatccttg aaatatatcc aaagacacat cttcaaatag aaaaaaagga
      781 ggagttagaa gcggtttttc catgatctgt ccgtagattt tgattcccaa gggcgatgac
      841 gaccaattcc ctgtccaggc aaagtcttgc ccgtattatc cgtaactcga cgatgataat
      901 ggggaaattt tccaatagga tgacctgttc tattaccgaa aggggctatc cgcatattat
      961 tgccgatttt aatctcacgt ccatatttag caaaggaaac aacctttcct gcggcaccta
     1021 caccaccagg aattgcgcct aatccgccag caatagcaac atctctaaca gaagctggtc
     1081 tgcctgtcgt tgcataacta aaaccatgct gtgtccacat accaatggca gcaccaccca
     1141 agatagccaa tggaagaaac gccccctcag tctccttcat ctccttctga gaaagctccg
     1201 ccaactgcat cggcgcatct gcccgcgtat ggaatacttg gttttcaaat atctgattgt
     1261 ccatgctgtt tgccatcgcc ggagcggcaa tcattgtcag aatcatcatc gctgcggtaa
     1321 tttgtttttt cataataact cctttggatt acaaggttgg aaaatcaaag ccctgcttag
     1381 aacgtatgtt gcacacccaa tttcaatagg taaatcagat tgcaaatcca gcaatttgaa
     1441 tattgtcatt gttccgtgca aaagggattt ttattgatga gttgtgtact gggtttcagc
     1501 ttggcttttt agataatctt ttcacaagaa catacatcaa tactgtccaa aaaaaagatt
     1561 tgataaatat attgcaacat attttattcc acctccatcc gaaacagaaa ccaatatatt
     1621 tttaattaat acatagccga ttattacatt tattattcct ataatatata aggatcttgc
     1681 caaaattttt tttgatttta ttttaggaat atctcttatc catgctaaaa tacagcccaa
     1741 tgtcgaaaag aaaataacag caaacactac cttacctcct ctcacttcca accaaaccga
     1801 tagcaggttt ggttggaagt tggtttattt attatttaac ggcgaatgtc agtgttctta
     1861 cccgtagaac ctgcataacc agttatgcca ccagcaacag tccccactgc tacacctcgc
     1921 ataccattaa tcagaattct tcctattttt tcgaatccac tatttcttcc aaagatgcag
     1981 caaacgcagg ttgagcctag acccaatcta cgtttgctgc cgcatctgat ccctattgtt
     2041 tcttatcctt acatcttcct gccttgtcaa tcaaataaag acagaagact atacaaaaac
     2101 tgaccgacat actgaaaata cctatcccct tccatgcaat ctccgcacca ttgacccaat
     2161 agatcagact gagaaacaac aaagccacag tataaatcaa cgtaaaaaat attgcgtaaa
     2221 gcacaataaa gggaactttt atctcacggt tgttttttat aatatattca gcaacttgat
     2281 ttccgaatat acctgataaa aaatatagta ttagatcatc catttcgttt atcttctatg
     2341 ttttcccatt gcggcgctag aagactgatt taatgctgca ccatttgcac gaataactgc
     2401 attaggaata gcatttcccc ctttccaagc agaacgggca aaaacactag tagtaatccc
     2461 tgcaccgcgc aacatcgcac tgctatatcc gcctcctatc ataccaccag cggttgcagc
     2521 caaggtactt cttgttgaag caaattgccc tgttttaatt ttagaaatgc cgtgattagc
     2581 ccaagcacta attgcccctc ccatcaaagc acctgccaca ataggaagaa acgccccctc
     2641 agtctccttc atctcctttt gagaaagctc cgccaactgc atcggcgcat ctgcctgcgt
     2701 gtggaatacg tatttttcaa atgcctgatt gtccaatccg tttgccattg cgggggcgat
     2761 tatagacagc atcatcgtgg cttcagtgat ttgttttttc ataacaaatt cttagggagg
     2821 agataatgtt ccatcaaaat cctcctgaaa ggctgcctga aatttccaag cagccttttt
     2881 gattgcttat taatcggata gtgcgacaaa tataaagtgg gcggcaatca ttgccgtaac
     2941 ggcagccata actgttttat tttcttcaaa ccaaagcaag ttgagaaaca taaacatcaa
     3001 gaaatatgat ggttcttcag ttttgccgct gctttcttga gttagaagat aaaatataga
     3061 tatggcggtt atgccgattg ctgcttttat taaaatatat ttgtttttca tcatcttgta
     3121 tggtttttca tgcaagtttc aacaataaaa ttcggaataa gatagagaga tgttgatatt
     3181 tcagataaat atacaaaaca atcaagaaac tattggcggt atgtataatc ttgaatttct
     3241 ttttttgatg aaattaaaat aatgaaatat atggtaaacg ttacaacgga agccttagcc
     3301 tcccgattgc agtatttcaa ttccaagata aatgccgcat agaaaagatt aaatacttaa
     3361 atggttttta gcggcttaaa tatcttattt aattttattg attgttttcc taatagtttc
     3421 tgcaataaat aataagaaat agaataataa acaaacagaa catgaaaata aaaataaatc
     3481 tttcattatc ccagtaataa aactccaaag attttcctta tttccatcaa caataaaaat
     3541 tatcagttca tgaataaaga atactgcaaa gaaaatgctt cctgccgtta gagatatttc
     3601 taatctgctt attttccctt cgctatattt acctgataaa tagcctaaaa aagctgcaat
     3661 caaatcatcc attttaaaaa tttctgtaaa aacaggtaat gtctttaatt cattacctgt
     3721 tttgccatta tttatagtgg attaaattta aatcaggaca aggcgacgaa gccgcagaca
     3781 gtacaaatag tacggcaagg cgaggcaacg caacgccgta ctaatccact atatatatcc
     3841 attcatatag agaaaaattc ttatacccaa tataaaacaa ggtctttcat tatattttga
     3901 aaaacctaga agctttgtat ctattggttt atcaaaatta ataattattg cagaagacat
     3961 gtaggctaat aatcttgatt tatctatatt ttattaatta tatatttaac cccgaagtca
     4021 atatagaaat ttagtgattt taaagttctc ttatcaattt taatctcagg gagtacataa
     4081 aaatcctcag aataggcaaa ctctatatat gcatcatcat tcgataataa ttcaataata
     4141 tttttcattt catccgaaag aaatgtaacc atctcatatt gacatttatt tttagatacc
     4201 atttttgaat attgattaaa taattttgga ttactatttt tagtaattaa tccttccgga
     4261 gtaataaaac cactttgtat aaagtcatca cttatattaa cagccttccg aaaaaaaata
     4321 taatcacact ctttgttatc aatataaaat ctcatactct ttaataatga aatataagaa
     4381 tttccagaat tacaagcaat ttgaaaaaac atcattactc ctaaaactca taaatagtaa
     4441 ggaatatata tatatatgca tattccttac tattttttca caaattatgc ttatctatgc
     4501 ttatttccat aaaaagcatg ccctcgaatt ttttgacttg agttctggaa atgagaataa
     4561 tttgaatgga tttccttctg tccatgtcta ataacatttt gtcttcccca agcttggttt
     4621 gctaccgctc ttgcttgttg agatgttcgt gcatagacat tagctcctct tgataaagct
     4681 tgtgctgcaa cacgctgcgt aacccaacgc tgcgcaagga atctgcccgc atgcaaaatt
     4741 cctattgcca ccaacggtgc cgcagcccct tcagtttctt tcatctcctt ttgagaaagc
     4801 tccgccaact gcatcggcgc atctgcctgc gtgtggaaca cttggttttc aaatgtctga
     4861 ttgtccaagc cgtttgccat tgcgggggca atcatagaca gcatcattac ggctgaggtg
     4921 atttgttttt tcataataac tcctttggat tacaaggttg gaaaatcaaa acctgcttaa
     4981 aatgtatgct gtacgccaaa tttcagttcg gaactgcttt gccctgaaac gttgaaacgt
     5041 gcggatgcgt ttaaagccgt ggttttggtg aaaccgaaac ctgtgccgaa atgagcgtag
     5101 gtggatgtgt ttcttgcggt ttcttttttg ccgtctatgc ggtcgggctg tgtgcccagc
     5161 cattggatgc ctccggtcag gctgattctg tcgttggcgg caaatgagat gttggggttg
     5221 agcagcaggt agttgcccga tttgtagcgg atgccgtctg aaagggtttt gctgccgttg
     5281 atgcggtagg cggcggtgag ggaaaggaca atcggatcta tggctttgta ggtggtggcg
     5341 ccgatgagcc aggattttcc cgacgaggct ttgttgcgcg atttttcgta aaccgtgctt
     5401 tcaagaaagc tgattagggc ggggtttttg tcgtctttaa ggaaagtgtg gctgatgccg
     5461 agggatacgt cggacatccg tttgttgcgg gttttgccgt tgccgtcgag tttgcgttct
     5521 tcgtgccaca gatagctgcc gctgccgtaa atgtcggtat tcccggtcag tccgtagcgc
     5581 aaaccgagcg tgccgacgag catatcggta ttgctgccgt tttcttggat ttcggtcgga
     5641 atggggataa acgaggttgc gccggtttga atgtaaaccg gtgcggcaag ttcggcgcgg
     5701 ttgttttcgc tgttcaggta ggtaagggaa gtttccagtt tccattttcc cttgtcggtc
     5761 attatgtctt caatcgtcaa gggcaggtcg gcataagtgg ataaaggcag gatggcgggc
     5821 aaggcgggca aaaagatgcg cttcatattt ctcctattga tattaattct tatttactga
     5881 taataatgaa tatccgataa tcttgtctaa ataaattttt aaatcataaa aaacaatatg
     5941 tttgtttttg tcaattatgt ttcgatatgc cgtctgaaaa gtttgtgaaa aacggttaca
     6001 atccgccgca tgaaaaaacg caataatcct cttccgctgt tgaacggtgt caaacccagt
     6061 tatttggtgc tgccgcatga aaagcagttt tacgggctgc cgctgctgca ttttctgtgc
     6121 atccgctttc cttttgtggg cgcggacgat tggcgcaggc ggttgaacag cggttttgtg
     6181 gtcggttcgg atggtgcggc gttggacgaa catactttgt tcgagccggg taaggtgatg
     6241 ttttattatc gggaaaccag tcgcgagagc gagccgcgta ttccgtttga agaaaagatt
     6301 ttgcatattg atgaacattt gattgtggtg gacaagccgc attttctgcc cgtcatcccc
     6361 agcgggcgtt ttttgaggga aacgctgctc acacgtctgc gcctgcgtcc tgaattgcag
     6421 catttgaatg ttgaagacat tacgccgctg caccgcttgg acaaggatac ggcaggcgtg
     6481 atgctgctgt cgcacaatcc tgccacgcgg ggggcttatc agacgatgtt tcaaaacaaa
     6541 acggtatgga aaacgtatga ggcgcttgcc ccgacaagga cggatttgcc gtatccgctt
     6601 gatgtggttt cgcgtttggt aaggggtgaa aaatttttta cgacgcaaga ggcggaaggc
     6661 gaatcaaatg cacatacgac ggttgaacta attgaaaaca ggggggaatt cagcctttac
     6721 cgccttacgc cgcataccgg caagaaacac cagttgcgcg tacacatgat gggcttgggt
     6781 atgccgttat tgaatgacgc gctctatccc gtgccgtctg aagcgggcag cgaggattat
     6841 cggaaacctt tgaagctatt ggcaaaaaag attgcgtttg cagatccttt gtcgggtcgg
     6901 gaaagggtgt tttgcagcgg attttgccta taatgagagg gaacgcaaac ccgtatcggc
     6961 ggatgccgcc gatacgggtt ttacattatc gatgccgtct gaaaggggtt ttatccgttc
     7021 aggcatacgg gcgcgaagcg gaggatggtg tcgcgcagga cgatgagttt gccgtgaaag
     7081 aaatgcgtgg aaccggcgat ggtaatgacg ggcaaatctt gcggttccgc ccatttcagt
     7141 gctttcccga tttcgacgac ttcgtcttcc gcgccgtgta tcatcagcgt tttggcaaca
     7201 ttgggaacgg cggacggctc ggggcggccg gtatagtggc agactgccgc gccgatgagc
     7261 agcaataaat cgggtatgcg cgcttgtgcg gcaaatgtgg cgacataacc gccgaaggag
     7321 aagccggata aggcaaattc gggggcttcg ggatgttggg cgcgggcata gtcgatgacg
     7381 gcgatacagt cttgcgtttc accgcgtccg taatcgtgtg tgccttcgct gccgcctacg
     7441 ccgcgaaggt tgggcaggta gcagtggaag ccgagtttgc ttaaggcttt ggcggcggtt
     7501 tggatgactt tgttggtgtt cgtcccgcct tggagggggt tggggtggtt gatgacggca
     7561 acaccgcgtg ccggtacttg ttcggacggg atatggatgg tttctaaaat gccggcaggg
     7621 ccgggtatgt gtatggtttc aggtttttgc ataatggttt cctcttgatt ttccgcatat
     7681 tccgatgcag ccgcgaagat ggcggcttaa aggtggaaat gcttgccgtt gttggggttg
     7741 gatgctttca ggtcggcgag catgcggtgg aagtccaatc cgtaagcgtt gctcagtttg
     7801 tcggcacgtt ttttgagttt gtctatgttt tgctctttgg ggctgctttg gaatgccatt
     7861 accgcgacat tgccgtgact tttggcagga agttccaata cgcgcccttc aaagacgttt
     7921 aacaggcgtt cgatgaagcg ttgatagcgt ttgtcgccgc tccaccagtt ggtaacgaat
     7981 atgccgtctg aagagagtgc gttgcggcag tctcggaaga acggttcttc aaccagcgta
     8041 tcgatgattt gttcgccgtc gaatccgtcc accaagatga tatcggtgtt gtggcggaag
     8101 actttgatgt actctgcacc atctgcttca ataatttcaa atttttcgcc ctcgaaaggc
     8161 aactcgaaca ggttgcgggc aatggcgata acctgcgggt tgatatctac ggcagtttga
     8221 cgcgtatcgg gcaggtaggt atctatccag cgtgcaaacg agccgccgcc caagccgatt
     8281 tgggtgatat gttgcggaag agcgtcggta aacagcagcc agcccatcat cgcgcggctg
     8341 taagagagca ccagctcgga cgggtggtcg aggttcatcg agctttgaac ggtgtcgctg
     8401 cccaagtgaa gcgaacggat attgccttct tcggaaatgc cgacttcggg aaagccggat
     8461 tttgcaggac gcaggcggcg gtagggatgt cttgccatcg gtgtgaacgg tcggtttgaa
     8521 aggcggatat tttatcagaa tgccgatgct tgttctgttt caaattaatt tcttttcaaa
     8581 taaattactt attcggattt gccggggctt tcggataaat tccttgccaa ggtgcggcat
     8641 tgcctgcata attcgctttc tttgccggta tagctcagtt ggtagagcac ctgacttgta
     8701 atcagggggt cccgagttcg actcttggtg ccggcaccat ttctgctgat ggtgttgcaa
     8761 aacatttcag taagccggta tagctcagtt ggtagagcac ctgacttgta atcagggggt
     8821 cccgagttcg actcttggtg ccggcaccag atttgacagc ccgattgtgt aaaacagtcg
     8881 ggctgttttg catttgcggc acggtcggtg gcagggctgc gggcatttca ctataatagc
     8941 ccgtttcaaa ctgaaaaggc cgtctgaaaa gggcggggta acaatatctg atgattactg
     9001 tgaacacact gcaaaaaatg aaggcggtag gtgagaaaat cgcgatgctg accgcttacg
     9061 aatccagttt tgccgcgctg atggacgatg ccggcgtgga aatgctgctg gtcggcgact
     9121 ctttgggtat ggcggttcaa gggcggcagt cgacgctgcc cgtcagcctg cgcgatatgt
     9181 gctatcacac cgaatgtgta gcacgcggtg caaaaaatgc gatgattgtc agtgatttgc
     9241 cgtttggtgc atatcagcag agtaaggagc aggcgtttgc cgccgccgcc gaactgatgg
     9301 cggcaggagc gcatatggtt aaacttgaag gcggtgtgtg gatggcggaa acgactgaat
     9361 ttttgcaaat gcgcggtatt ccggtttgtg cgcacatcgg tctgaccccg caatccgtgt
     9421 ttgccttcgg cggatataaa gttcaggggc gcggcggcaa ggcgcaggcg ttgcttaacg
     9481 atgccaaggc gcatgacgat gcgggggcgg cggtcgtgct gatggagtgc gtaccggcgg
     9541 aactggcaaa aaaggtaact gaaactgttt cctgtccgac catcggcatc ggcgcgggtg
     9601 cggattgcga cgggcaggtt ttggtgatgc acgatatgct cggcattttc ccgggtaaga
     9661 cggcgaaatt cgtcaaaaac tttatgcagg ggcatgatag tgttcaagcg gcggttcggg
     9721 cgtatgttgc cgaagtcaaa gccaaaactt tccctgctgc ggaacatatt tttgcagatt
     9781 gaacaaggtt tgctgccaat gccgtctgaa agccgtttca gacggcattt tgttttgccg
     9841 tgcgcggcgc gtataatcgg cgcgttttgt cgggcaggaa gcccgaaaga taaggattac
     9901 cgttatgcaa atcatacata ccattcgaga actgcgcgcg tggcgtaaaa atgcgggaaa
     9961 ggtggcattt gtgccgacca tgggcaatct gcatgaaggg catcttgcgc ttgtgcgtga
    10021 ggcgaaaaaa cgcgcggaca gtgtcgtggt cagcattttc gtcaaccgcc tgcaattcgg
    10081 tcagggcgag gatttcgaca aatatccgcg tactttgcaa caggatgcgg acaagctgga
    10141 agccgagggt gttgccgttg ttttcgcgcc cgatgagaaa gaactctatc cgaacgtgga
    10201 acagcgttac aacgtcgaac cgcccaatct gcaaaatgag ttgtgcggca agtttcgtcc
    10261 gggacatttc cgcggggtgg cgacggtggt gtccaagctg ttcaatattg tcgcgccgga
    10321 tgttgcctgt ttcggcaaaa aagactatca gcagcttgcc gtgattaaag gtttgaccga
    10381 ggatttgaat tttgatgttg aaatagtgcc tgtcgatacg gggcgcgcgg aagacggttt
    10441 ggcactctcc agccgcaacc agtatttgag tgcggcggaa cgcgacgaag caccgcgcct
    10501 gtaccgcgaa ttaaaggctg ttgccgaatc cttggcgcag ggcagtttgg attatgcagg
    10561 tttggaaaaa cgtgccgtcc aatccctgac agaatacggc tgggtggtcg attatgtcga
    10621 aatccgccgc gccgatacgc tcgaagtggc gcgggcggga gataagaaac tggtggtctt
    10681 ggccgccgcc cgtctgggga cgacgcgcct gattgacaat ttggaaataa aactccctta
    10741 aactgcaagc gtcgggaatg ccgtctgaag cggatttgcg tttcagacag catttatttt
    10801 tttgaacggg gtttcgcaaa tctacaaacg attctgcttg tgataaagtt acgcctgatt
    10861 atatgccgtc tgaaggttcg gacggctgtc ggataaagga agattatgtt acccgcccgt
    10921 ttcaccattt tatctgtgct cgcggcagcc ctgcttgccg ggcaggcgta tgccgccggc
    10981 gcggcggatg cgaagccgcc gaaggaagtc gtaaaggttt tcagaaagca gcagcgttac
    11041 agcgaggaag aaatcaaaaa cgaacgcgca cggcttgcgg cagtgggcga gcgggttaat
    11101 cagatattta cgttgctggg aggggaaacc gccttgcaaa aggggcaggc gggaacggct
    11161 ctggcaacct atatgctgat gttggaacgc acaaaatccc ccgaagtcgc cgaacgcgcc
    11221 ttggaaatgg ccgtgtcgct gaacgcgttt gaacaggcgg aaatgattta tcagaaatgg
    11281 cggcagattg agcctatacc gggtaaggcg caaaaacggg cggggtggct gcggaacgtg
    11341 ctgagggaaa gaggaaatca gcatctggac ggactggaag aagtgctggc tcaggcggac
    11401 gaaggacaga accgcagggt gtttttattg ttggcacaag ccgccgtgca acaggacggg
    11461 ttggcgcaaa aagcatcgaa agcggttcgc cgtgcggcgt tgaaatatga acatctgccc
    11521 gaagcggcgg ttgccgatgt ggtgttcagc gtacaggggc gtgaaaagga aaaggcaatc
    11581 ggagctttgc agcgtttggc gaagctcgat acggaaatat tgccccccac tttaatgacg
    11641 ttgcgtctga ctgcacgcaa atatcccgaa atactcgacg gctttttcga gcagacagac
    11701 acccaaaacc tttcggccgt ctggcaggaa atggaaatta tgaatctggt ttccctgcac
    11761 aggctggatg atgcctatgc gcgtttgaac gtgctgttgg aacgcaatcc gaatgcagac
    11821 ctgtatattc aggcagcgat attggcggca aaccgaaaag aaggtgcttc cgttatcgac
    11881 ggctacgccg aaaaggcata cggcaggggg acggaggaac agcggagcag ggcggcgcta
    11941 acggcggcga tgatgtatgc cgaccgaagg gattacacca aagtcaggca gtggttgaaa
    12001 aaagtgtccg cgccggaata cctgttcgac aaaggtgtgc tggcggctgc ggcggctgtc
    12061 gagttggacg gcggcagggc ggctttgcgg cagatcggca gggtgcggaa acttcccgaa
    12121 cagcaggggc ggtattttac ggcagacaat ttgtccaaaa tacagatgct cgccctgtcg
    12181 aagctgcccg ataaacggga ggctttgagg gggttggaca agattatcga aaaaccgcct
    12241 gccggcagta atacagagtt acaggcagag gcattggtac agcggtcagt tgtttacgat
    12301 cggcttggca agcggaaaaa aatgatttca gatcttgaaa gggcgttcag gcttgcaccc
    12361 gataacgctc agattatgaa taatctgggc tacagcctgc tgaccgattc caaacgtttg
    12421 gacgaaggct tcgccctgct tcagacggca taccaaatca acccggacga taccgctgtc
    12481 aacgacagca taggctgggc gtattacctg aaaggcgacg cggaaagcgc gctgccgtat
    12541 ctgcggtatt cgtttgaaaa cgaccccgag cccgaagttg ccgcccattt gggcgaagtg
    12601 ttgtgggcat tgggcgaacg cgatcaggcg gttgacgtat ggacgcaggc ggcacacctt
    12661 acgggagaca agaaaatatg gcgggaaacg ctcaaacgtc acggcatcgc attgccccaa
    12721 ccttcccgca aaccccggaa ataatgcagg tccatccttt cagacggcat aaggtttgcc
    12781 gggaagctgc ggcattcggg caaaccgcac gcagttcgca cgcgttttgc acggcacgcc
    12841 gaacccatcg gccggcagga tggcatccgt taaggaaatt ctgatgaaac acactgtatc
    12901 cgcatcggtc atcctgcttt tgaccgcttg cgcgcaatta cctcaaaata acgaaaacct
    12961 gtggcagccg tccgaacaca cccgcagttt cacggcggaa gggcggttgg cagtgaaagc
    13021 ggaagggaaa ggttcgtatg caaatttcga ttggacatac caaccgcccg tggaaaccat
    13081 caatatcaat acccctttgg gcagtacgct cgggcagttg tgtcaagaca gggacggcgc
    13141 attggcagtg gacggcaaag gaaatgtcta tcaggcggaa agtgcggaag aattaagcag
    13201 gcagctggtc ggtttcaaac tgccaatcca atatctgcat atctgggcag atggcaggcg
    13261 tgtggcgggc gcgccttacc gcatcctgcc ggacggcata ttggaacaat acggttggac
    13321 tgtcggcaga accgccgaca gtggggggca agtccgaacg ttgcaactga ataacggaaa
    13381 tttgaacatc aggctggttt tcaccgaaat cggtatgccg tctgaaaccg aaaccccgga
    13441 acgctgtgcg gcgcgcacga gataaggcgg acagatgaat attgcggacg gacggcaggc
    13501 gtttcccgca cctgcaaaac tgaatctcga tttgaggatt actggaaagc gggaagacgg
    13561 ttatcacaat atcgaaagca tattctgcct gatagatttg caggataccg tatatttgaa
    13621 actaagggac gacggcaaaa tcatcctgca caatccggtt gatggaatgc cgcaggaagt
    13681 agatttaagc taccgtgccg catcgttgct gcaaaaatat gcgcgcaacc ccgccggcgt
    13741 ggaaatatgg ctggacaaaa aaatcccgac aggggcgggt ttgggcggcg gaagctcgga
    13801 tgcggcaacc gttttgctgg tgttgaaccg ttggtggcag tgcggtctga cgcagcggca
    13861 gctcattgat tcgggcgcgg ctctgggggc ggacgtaccg ttttttattt tcggaaaaaa
    13921 tgcgtttgcg cggggtatag gcgacaggct ggacgaaatg gatattccga aacagtggta
    13981 tgtcatcgtc aaaccgcccg tccacgtttc cactgcaaaa attttcacac acgaaagctt
    14041 gacacgggat tctgcctcaa gcataatgcc gactttccaa aacctgcaac cgtttagaaa
    14101 tgatatgcag gcagttgtat ttaaagaata ccctgaagtt tggaaagcct attccgagtt
    14161 gtcccgatat ggatttgcct taatgacagg ttctggtgcg tgtgtattca cggcgtgtca
    14221 agataggaat agcgcataca atatataccg acaagtttca gatttgtacg aggcatattt
    14281 ggcagagggt ctttcaaaac atccttggtt gtccgtataa acattgttgg ggagtcgtca
    14341 agcggttaag acactggatt ttgattccag catgcgaagg ttcgaatcct tcctccccag
    14401 ccaagtcaaa cgagttgggg agtcgtcaag cggttaagac actggatttt gattccagca
    14461 tgcgaaggtt cgaatccttc ctccccagcc agcccttttt ggggagtcgt caagcggtta
    14521 agacactgga ttttgattcc agcatgcgaa ggttcgaatc cttcctcccc agccagataa
    14581 aagcgtgtaa gcctgcttac acgcttttat ttcatagaaa taaaaatatt gaaatgcctt
    14641 tgtttgtgtc ggatgttgca ggtataatgt cgggcttggt acaagcagag ggaagcattg
    14701 tgttttctga gcggaagtta aacataaaat caggtgagaa tatggctgcg tacgacagtt
    14761 tgatggtatt tacaggcaat gccaatcccg aattggcaca acgtgttgtc aggcatttgg
    14821 acatttcttt gggcaatgct tccgtatcca agttttcaga cggcgaagtt gccgtcgaac
    14881 tgttggaaaa cgtacgcggg cgcgatgttt tcatccttca gccgacctgt gcgccgacca
    14941 atgacaacct gatggaaatc ctgacgatgg cggatgcact gaagcgtgct tcggcaggtc
    15001 gtattaccac agccattccg tatttcggct atgcgcgcca agaccgccgt ccgcgttccg
    15061 tccgcgttcc gatttctgcc aaactggtgg caaatatgct gtattcggca gggatcgacc
    15121 gtgttttgac tgtcgatttg catgccgacc agattcaagg tttcttcgat attccagtgg
    15181 acaatattta tgccaccccg attctgttga acgacatcaa acaacagcgg attgaaaatc
    15241 tgaccgtcgt cagcccggac atcggcggtg tcgtccgcgc ccgcgccgtg gcaaaatcct
    15301 tgaatgccga cttggcaatc atcgataaac gccgcccgaa agccaatgtg gcagaagtca
    15361 tgaacatcat cggcgatatt caaggcagaa cctgtctgat tgtggacgat atgattgaca
    15421 ctgcaaatac gctgtgcaaa gccgccgtcg ctctgaaaga gcggggggcg gaacgtgtct
    15481 tggcatatgc cagccacgcc gtattctccg gagaggcggt cagccgtatc gcctcatccg
    15541 aaatcgacca ggtggtcgta accgatacca ttcctttgtc tgaagcggct aaaaactgcg
    15601 accgtatccg tcaggtaacg attgccggtc tgttggccga aaccgtccgc cgcatcagca
    15661 atgaagaatc cgtttcatat ctctttaatg aagaagtgat gacaggcagt atgttgctgc
    15721 cataagcccg aagccgtctt aagctggtcg cggccgatga cggcgatttt acctaacttg
    15781 gagtatttaa catgacttat gaaattcaag cctctgttcg tgaagcacaa ggcactggtg
    15841 cgagccgccg cctgcgtcgc gaaggccaaa tccccggcat tctgtacggt gaaggtcaag
    15901 agcctgttgc aatcgctgtg gatcacaaaa ccgtattcta cgcattggaa aaagaatctt
    15961 tccataccgc gttgattaaa ttgtctctga acggcgaaac caaagacgtt atcgtccgtg
    16021 atttccaaat gcacccgttc cgccgcgaag ttcaacacat cgacttccaa gctgtgaaag
    16081 ccgatcaact tgtacgcatc cgtgttcccc tgcacatcgt taacgctgaa aattcccaag
    16141 cggtcaaact gcaaggcggc cgtgtatctc tgttgaacac gactgttgaa gtgcttgcat
    16201 tgcctgccaa tatccctgct ttcttggatt tggattgtgc cgaagtggtt gccggcgaca
    16261 ttctgcatct gtccgacatc aaactgcctg aaggtgtaga aagcgtttcc ttgaaacgta
    16321 acgaaaatct ggctgttgcc accgttaccg gtaaaaaacg ctaattgatt tcagcagcag
    16381 ggcggcgcgt atgcaatacg taccgccctg ttgttttatg ccgtctgaac cgtgtttcag
    16441 acggcatttc tttatttgtt ggaaaaacgg gatatttgaa acggcagatt actgtcccgt
    16501 cagacgcatc caaagccttt gccaccggct tcttttttct acattttcca gtgcgacaat
    16561 ttctttttcg gtaatggtgt atccgttttg cctgattttg atttttccta aaatctgtcc
    16621 cttttttacc ggggcgggaa tcggctgtat ggtttctaga atttgttctg ccattttcgc
    16681 ttccttatgt ggcagagtga tgtaggcttc tttgaggaag cctgcgcgga cggttttttt
    16741 gctgcctccg gaaatttgga tttgggcaac ggttttgcct ttcggatata ttttgggcgt
    16801 atcgaaggcc tgcaatgccc agttcagcag cttgctgttg tctgatgcgc gtgtttccgc
    16861 cgattccgaa cccaatgtga tgacaaggat gtgcctgccg ttgccggagt atgacacggc
    16921 aaggttgtag ccgccgcttt ctgtgtgtcc ggctttcaga ccgtttacat tgttgtccct
    16981 atataaaagg atattgcggt tgttttgctc tatatttttg aatttgaaag atttgatgga
    17041 aaacagcggg taatattccg gaaagtcgcg catcaatgct tcagacagct gggcgaggtc
    17101 tttggcggtg gaaacctgtc cttctctact caagcctgtc gggtttttga atacagtgtt
    17161 cttcatgccc aagcgtcggg cttctttgtt catttgttgc acaaaatttt caatcgagcc
    17221 gttgcccagc cggccggcaa gggttagggc ggcatcgttt gcggatagtg caatcatgcc
    17281 ttttaagagt ttgtcggtgc tgaccgtatc gccgggacgt acaaacattc tgcttccttc
    17341 tgaagcccat gcggattcgg gtatttttaa gttttcttca gatcggatat ttcccgattt
    17401 catgtttttg aaaaccagat atgcggtcat cagttgggtt agtgccgccg gttcgacagg
    17461 ggtattgatg tttttggcgg ataaaatctg tttgctttga aggtcgataa cgatgtgtgc
    17521 cgctgtgagg gtttcgggtg tttggagcgt gggggcggcg tgtaccgccg gtttgttggg
    17581 cgcgggcgat gcggccgttg cgtgagaaac gcctaagatg atggaaagca ggacgggcag
    17641 gattttatgt gctgtcatga aatattctaa ttgtgtgcgt gtttcagtct gccgattata
    17701 cgcttagggt gtctgatcgg gcggattttt cttgctttcg cgccgtcttg ggcgtatggt
    17761 tttgggtttt gcgattttaa taaaccgatt atcccatatt gaattatgaa cacgcccctt
    17821 ccttattcca attacctcat ccgcatcctg acggcatctg tctatgatgt cgcggtcgaa
    17881 acgcctttgg aaccggcacg cagcctttct gtacgtttga aaaacaacat ccttttgaaa
    17941 cgcgaagatt tgcagccggt tttttcgttc aaaatacgcg gcgcgtacaa caaaatgtcc
    18001 aagttgccga aagatgcgct cgcttgcggc gtgattgcgg caagcgcggg caatcacgca
    18061 caaggcgtgg cattgtccgc acagcgtttg ggttgccgtg ccgttatcgt catgccggag
    18121 actacgccga aaatcaaagt ggatgcggtc aaaagccgtg gcggcgaggt ggttttgcgg
    18181 ggcgtttcat acaacgatgc ttacgattat gcgatggagc tggcggaaca ggaagggctg
    18241 acctatatcg caccgtttga cgatcctgat gttattgcag gacaagggac ggtaggcatg
    18301 gaaattgtca gccagcatcc cgatccaatc cgcgccgtat tcgtaccgat aggggggggc
    18361 ggtttggcgg cgggcgtggc ggcatttatc aagcaggtcc gtcccgaaat caaagttatc
    18421 ggcgttcaga ccaacgattc ctgctgtatg aagcaatcgg tcgaagcggg cgaaatcgtc
    18481 catttgaaag atgtcgggct gttttcagac ggcacggcgg tcaaagtcgt cggaaacgaa
    18541 accttccgcc tctgcaaaga acttttggat gaaatcatta cagtcgatac cgatgcggtt
    18601 tgcggcgcgg tcaaggatat tttcgatgac acgcgcagca ttaccgagcc ggcgggcgcg
    18661 ttggcgttgg cgggtctgaa agcctatatc gcccgagaag gcgcggaaaa ccaaaccctg
    18721 attgccgtta ccagcggtgc gaatatgaat tttcaccgtt tgcgccatgt gtcggagcgt
    18781 agtgaattgg gcgagggcaa cgaaggtatt tttgccgtta ccatccccga agaacgcggc
    18841 agcttcctta agtttgtcaa tatattggga aataggaata ttaccgagtt caactaccgc
    18901 tacggagacg atgaaaaagc gcatatcttt gtcggacttc aagcggcagg cccgcaggat
    18961 ttggcggtta tcggcagccg gttggatgag gcgggattgc ccaatgtcga cctgactgat
    19021 gatgagattg ccaaaatcca tatccgttat atggttggag ggcggacgga caaagtagaa
    19081 aacgagcgtt tggtcagttt tgagtttccg gagcgtccgg gggcgttggc gcgttttttg
    19141 aaccatatgc agggcggttg gaacattacg ctcttccatt accgcaacca cggtgcggat
    19201 tacgggcgga ttttggtcgg tatcgatgtg ccgccgcacg atgccgccgc atttgacggt
    19261 ttcttggaaa gtctgggata cagctatcac gaggaaacgc aaaatgccgc gtacaagctg
    19321 tttcttgcct gacgcttgaa agcacaatgc cgtctgaaag cctttcagac ggcattgcgc
    19381 tttcatggtt aaatcgaata ttcaatcagt tcgttttgag agaagacata aacctgtttc
    19441 ggaatcagct tcaattcttt gccttcggcg attgggtaac gcgcggcatc gctgccagcc
    19501 agcgtgatat gcacgtcttg tttgccgtgt ttcaccaaaa tatgcgtcaa tgccccgacg
    19561 gcgtggactt tttcgatttc ggcacaaatc atcggtgttt cgtgttcggc ggcgatctgc
    19621 cattcgtgcg ggcggatata gccggtggcg gtttgttcct gccatttgta ttgtgcgtcc
    19681 aatttccacg cgaagccgtt ataatgccag aagccttttt cgatgcgtcc ttcaaaagcg
    19741 tcggtttcgc cgaggaactc ggtaacgaag gcattttcgg gtttgcggta aatagcttcg
    19801 gcgctgccgg tttgttcgat tttgccgtgg ttcatcacga cgatttcgtc ggaaacttcg
    19861 agggcttctt cttggtcgtg cgtaaccaga atgctggtta cacccaggtt gtgatggata
    19921 tcgcgcagcc aggtgcgtaa ttctttgcgt actttggcgt ccaacgcgcc gaagggttcg
    19981 tccaaaagca ggagtttcgg ttcgaccgca agcgcacggg cgagggcgat gcgctggcgt
    20041 tgcccgccgg agagttggtg cggataggat tttgccaaat gagagagctg cacgagcttg
    20101 agcaattctt cgactttggc gcggatttgt cctttggacg ggcgttcgga cttgggcaat
    20161 acggtcaaac cgaaagcgac gttgtcaaac acgttcatgt ggcggaagag ggcgtagtgt
    20221 tggaacacga agccgacttt gcgctcgcgc acgtgtttgg cggttacgtc ttgcccgtca
    20281 aagaggattt ggccgccgtc ggcgttttcc agtccggcga taatgcgtaa aagcgtggtt
    20341 ttgccgcagc cggacgggcc gagtagggaa acgagtttgc cggtggggac gttgaggttg
    20401 atgtttttca gcgcgtgaaa attgccgaag tgtttgttta agttttggat ggtgatactc
    20461 atactgtgtt cctttcggcg gcggcgagtt ttttgtcttg taatttggta atgatgtttt
    20521 gcaccgccag cgtcgccagt gctaaaagtg ccaatacgcc ggagagggcg aatgcgccgg
    20581 taaagttgta ttcgttgtag aagatttcga ccaaaagcgg gacggtgttg gtttcgccgc
    20641 gtatgtgtcc cgataccacg ctgaccgcgc cgaattcgcc catcgcgcgg gcgttggtga
    20701 ggatgatgcc gtagagtaac gcccatttga tgttgggcag ggtaacgcgc caaaacatct
    20761 gccagccgct tgcgccgagt atcagcgcgg cctgttcttc gctgtcgccc tgcgcctgca
    20821 ttaaaggaat gatttcacgc gcgacaaagg ggaaggtaac gaacaaggtc gccaaaataa
    20881 tgccggggat ggcaaagata atctgtatgc cttgcgcttc gagccggcca cccaatgccg
    20941 tgtgcgcgcc gaacaataag acgaacatca aaccggctac cactggcgat acggaaaacg
    21001 gcaaatcgag cagggtggtc agcaactgct tgcctcggaa gtcaaaacgg gtcagcagcc
    21061 acgccatcgc cacgcccaag acggcattga cggggacgac aatcagcgca gtaatcagcg
    21121 tcaatttgat ggcagaccac gcttcgggat cgcttaagga tttcaggtac aaatcccaac
    21181 cgccttttaa ggcctcgtaa aacacggcgg cgagcggcac gaacagcatc agcaacagaa
    21241 agcccaaggc ggtagcagtc agcaatacgc gcagccaacg cggttcggtc aggttgggat
    21301 tggcggaata gggtttcatg gcggtggtgt tccccggttg gttgttttaa ggtgttcgga
    21361 tgccgtctga aaaaccgttt tttgtggggc ggattcgttt tcagacaacc ttttattgat
    21421 taagggaata aaaacgtcta gctaccgtca ttcccgcgca ggcgggaatc caccacaggg
    21481 caacaggaaa acagaaaata aataaggcag ccgaaattca ccaatggatt cccgcctgcg
    21541 cgggaataac ggtaacaggt atttcagacg acctcaaccc ttcgcgcccg aacgcctgcc
    21601 caacgcccac tgcatcacgt tcagcgcaaa cagaatcaca aacgaaacca gcagcataaa
    21661 caacgccacc gccgacgcgc cctgtacgtc gaactgttcc agcttgcccg taataatcag
    21721 cggcaggatt tcagaaacca tcggaatatt gcccgcgata aaaatcaccg agccgtattc
    21781 ccccgttgcc cgcgcgaaca tcattcccgc gccagtcaag agtgccggcg tgatttccgg
    21841 cagcagcacg cggcggaacg tcgtaaagcg gtttgcgccc aaagtcgccg ccgcttcctc
    21901 atattcgccc gataattcct ccaacaccgg ctgcacggcg cggacgataa agggcaggct
    21961 gacgacgacc agcgcaatcc aaatgccgac gggtgtaaac gcgattttga tgcccaaagg
    22021 ctcgaaaaaa cggcctatcc aaccgttggg cgcatacagg gtcgccaacg cgatacccgt
    22081 aaccgccgtc ggcagcgcaa acggcaaatc gaccagcgcg ttcgccagac ccttgagcgg
    22141 aaattcatag cgcaccaaca cccacgccac cagcgtgccg aacacgacat tggtcagcat
    22201 cgcataaaac gacatccgca aactcagcca caccgccgcc aacacgttcg gctcggcaat
    22261 cgtgttccaa aagccgcccc agccgatttc cgccgccttc gccgccatca tcgcaaacgg
    22321 caagaccaca agcagcgaca ggcacaatac ggtcagcccg aggctgagtt tgaagccggg
    22381 cagtacgccg ggcgttttga gcggtaacat aaaacaatgc tgaaaataag gaaaaggaag
    22441 gactacttta acgatgccgt ctgaaaaacg gaaagaatgg aaagtttggt gcaaagacga
    22501 atttgttata aagcggttgg cagtttctca agcgggcgcg atgtttt
//
LOCUS       DAWEYF010000011        22486 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.011, whole genome shotgun sequence.
ACCESSION   DAWEYF010000011 DAWEYF010000000
VERSION     DAWEYF010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.011"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..744
                     /locus_tag="WGN93_000325"
     CDS             <1..744
                     /locus_tag="WGN93_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HEZ0226283.1"
                     /translation="TNIVKIDEKLEAVADTVDKHAEAFNDIADSLDETNTKADEAVKT
                     ANEAKQTAEETKQNVDAKVKAAETAAGKAEAAAGTANTAADKAEAVAAKVTDIKADIA
                     TNKDNIAKKANSADVYTREESDSKFVRIDGLNATTEKLDTRLASAEKSIADHDTRLNG
                     LDKTVSDLRKETRQGLAEQAALSGLFQPYNVGRFNVTAAVGGYKSESAVAIGTGFRFT
                     ENFAAKAGVAVGTSSGSSAAYHVGVNYEW"
     gene            complement(810..1148)
                     /locus_tag="WGN93_000326"
     CDS             complement(810..1148)
                     /locus_tag="WGN93_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ0226284.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            1299..5255
                     /gene="purL"
                     /locus_tag="WGN93_000327"
     CDS             1299..5255
                     /gene="purL"
                     /locus_tag="WGN93_000327"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ0226285.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKRQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGGKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGADKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFAARCGISADIDCLMD
                     KFLPIHYPDFQGDPAEDLSDELYNHAAIKILFNEELGAVIQIRQQDRDYVDAAFEAAG
                     LTGAVSRIGSPDFDNESISFFGYGYFLEQNRADLQRAWQETSHAIQKLRDNPACADSE
                     FALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFTRA
                     GFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQFA
                     AFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKSAS
                     LILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNPNG
                     SPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLFAGARKALG"
     gene            5350..6108
                     /gene="gloB"
                     /locus_tag="WGN93_000328"
     CDS             5350..6108
                     /gene="gloB"
                     /locus_tag="WGN93_000328"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ0226286.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            6422..10899
                     /gene="mspA"
                     /locus_tag="WGN93_000329"
                     /gene_synonym="ausI"
                     /pseudo
     CDS             6422..10899
                     /gene="mspA"
                     /locus_tag="WGN93_000329"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
     gene            11131..12585
                     /gene="mgtE"
                     /locus_tag="WGN93_000330"
     CDS             11131..12585
                     /gene="mgtE"
                     /locus_tag="WGN93_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ0226287.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLGELHPADVAAVLESLPPRERNVVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(12671..13579)
                     /gene="hslO"
                     /locus_tag="WGN93_000331"
     CDS             complement(12671..13579)
                     /gene="hslO"
                     /locus_tag="WGN93_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ0226288.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGRGRLKMLVAEAASDRTVRATARWDET
                     AEIADDESLGDLLGEGGVFVLTLQPKDGEPWQGVVPLEGGGIAQMLANYMKRSEQIDT
                     HIVLSASDEAAGGLLVQRLPEAVLDEEAWEHVSTLARTLTADELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            13824..14579
                     /locus_tag="WGN93_000332"
     CDS             13824..14579
                     /locus_tag="WGN93_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ0226289.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            14598..14816
                     /locus_tag="WGN93_000333"
     CDS             14598..14816
                     /locus_tag="WGN93_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226290.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            14961..15305
                     /locus_tag="WGN93_000334"
     CDS             14961..15305
                     /locus_tag="WGN93_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ0226291.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            15305..15997
                     /locus_tag="WGN93_000335"
     CDS             15305..15997
                     /locus_tag="WGN93_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ0226292.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            16064..17284
                     /gene="argJ"
                     /locus_tag="WGN93_000336"
     CDS             16064..17284
                     /gene="argJ"
                     /locus_tag="WGN93_000336"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ0226293.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALVINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            17344..18780
                     /locus_tag="WGN93_000337"
     CDS             17344..18780
                     /locus_tag="WGN93_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ0226294.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETTAQTG
                     NAPARPQTAKRECRLKIKTPPIKRRQPP"
     gene            18935..20326
                     /gene="hrpA"
                     /locus_tag="WGN93_000338"
     CDS             18935..20326
                     /gene="hrpA"
                     /locus_tag="WGN93_000338"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ0226295.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     VAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKQRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRISAGV
                     CIRLFSEEDFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            20427..21554
                     /locus_tag="WGN93_000339"
     CDS             20427..21554
                     /locus_tag="WGN93_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226296.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANINEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            21731..>22486
                     /locus_tag="WGN93_000340"
     CDS             21731..>22486
                     /locus_tag="WGN93_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HEZ0226297.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKTSRLLIALFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRHKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSRIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKP"
BASE COUNT         5556 a         6929 c         5520 g         4481 t
ORIGIN      
        1 acaaatatcg taaaaattga tgaaaaatta gaagccgtgg ctgataccgt cgacaagcat
       61 gccgaagcat tcaacgatat cgccgattca ttggatgaaa ccaacactaa ggcagacgaa
      121 gccgtcaaaa ccgccaatga agccaaacag acggccgaag aaaccaaaca aaacgtcgat
      181 gccaaagtaa aagctgcaga aactgcagca ggcaaagccg aagctgccgc tggcacagct
      241 aatactgcag ccgacaaggc cgaagctgtc gctgcaaaag ttaccgacat caaagctgat
      301 atcgctacga acaaagataa tattgctaaa aaagcaaaca gtgccgacgt gtacaccaga
      361 gaagagtctg acagcaaatt tgtcagaatt gatggtctga acgctactac cgaaaaattg
      421 gacacacgct tggcttctgc tgaaaaatcc attgccgatc acgatactcg cctgaacggt
      481 ttggataaaa cagtgtcaga cctgcgcaaa gaaacccgcc aaggccttgc agaacaagcc
      541 gcgctctccg gtctgttcca accttacaac gtgggtcggt tcaatgtaac ggctgcagtc
      601 ggcggctaca aatccgaatc ggcagtcgcc atcggtaccg gcttccgctt taccgaaaac
      661 tttgccgcca aagcaggcgt ggcagtcggc acttcgtccg gttcttccgc agcctaccat
      721 gtcggcgtca attacgagtg gtaagcagca tctcccgata aagaaaccgc agccctgcaa
      781 ggctgcggtt tttattttct atccggccgt cagactgctg cgtccgcacg ttcgcccgtg
      841 cggatacgga ttgcctcctc gaccggcagc acaaaaatct tgccgtcgcc gatttttccc
      901 gaacgcgcca cctcgacaat cacgtcaatc gcgcgttcca cagcgtcatc cgccaacacc
      961 agctcgattt tgaccttggg caggaaatcg acagcgtatt ccgcgccccg gtaaatctcc
     1021 gtatgcccct tctgcctgcc gaaccctttg acctcgctga cggtcatacc cgtaatgccg
     1081 atttccgtca acgcctcgcg cacgtcgtcg agtttgaacg gtttgacaat cgcctcgatt
     1141 tttttcataa aatttccttt gaacaaacaa tacaaacaca tccgaaaaac gggaacctcc
     1201 cgtcagattg tcaacatttt aagccaaaat acccaagcaa tacagccccg ttgcgcgtat
     1261 aatgacagat tttccaaccg catttgagag ccgaatccat gtctgtcgtt ttgcccttgc
     1321 gcggcgttac cgccctttcc gatttccgtg tcgaaaaact cttgcaaaaa gccgccgcac
     1381 tcggactgcc cgaagtcaaa ttaagcagcg aattttggta tttcgccggc agcgagaaag
     1441 cattggatgc cgcgactgtc gaaaaactgc aagccttgtt ggcggcgcaa agcgttgaac
     1501 aaacgccaaa agcgcgcgag ggcttgcatt tgtttttggt aacgccccgt ttgggtacga
     1561 tttcgccgtg ggcttccaag gcgaccaata tcgcggaaaa ctgcggtttg gcaggcatcg
     1621 agcgcatcga gcgcggcatg gcggtgtggc tggaaggtgc gcttaccgat gaacagaaac
     1681 ggcaatgggc ggcgttgctg cacgaccgca tgaccgaatc ggtgctgccc gattttcaga
     1741 cggcatccaa attattccac catctcgaat ccgaaacctt ttccaccgtt gatgttttag
     1801 gcggcggtaa agaggctttg gtcaaagcca ataccgaaat gggtttggca ctctccgccg
     1861 acgaaatcga ttatctggtt gaaaactatc aggctttgca gcgcaatccg tccgatgttg
     1921 aattgatgat gttcgcgcag gcaaacagcg aacactgccg ccacaaaatc ttcaacgccg
     1981 atttcatcct caacggcgaa aaacagccga aatccctgtt cggtatgata cgcgacacgc
     2041 acaacgcgca tcccgaaggc acggtcgtcg cttataaaga caattcgtcc gtaattgaag
     2101 gcgcgaaaat cgagcgtttc tatccgaatg cggcggaaaa ccaaggttac cgtttccacg
     2161 aagaagacac gcatatcatc atgaaagtgg aaacgcacaa ccacccgacc gccatcgcgc
     2221 cgtttgcggg cgcggcaaca ggcgcgggcg gcgaaatccg cgacgaaggc gcgacgggca
     2281 aaggttcgcg tccgaaagca ggcttgaccg gctttaccgt ctccaacctc aacatccccg
     2341 acctcaaaca gccgtgggaa caagactacg gcaagccgga acacatttcc tcgccgttgg
     2401 acattatgat tgaaggcccc atcggcggcg cggcgttcaa caacgaattc ggccgcccca
     2461 acctcttggg ctacttccgc acttttgaag agaagtttga cggtcaggtt cgcggctatc
     2521 acaaaccgat tatgattgcc ggcggcttgg gcagcattca ggcgcagcag acgcataaag
     2581 acgaaatccc cgaaggcgca ttgctgattc aactgggcgg cccgggcatg cttatcggct
     2641 tgggcggcgg cgcggcttct tcgatggata ccggcacgaa cgacgcgtct ttagacttca
     2701 attccgtaca acgcggcaac cccgaaatcg aacgccgcgc gcaggaagtc atcgaccgct
     2761 gctggcagct cggcggcaaa aacccgatta tctccatcca cgacgtgggc gcgggcggtt
     2821 tgtccaacgc cttccccgaa ctcgtcaacg atgccggacg cggcgcggta ttcaagctgc
     2881 gcgaagtgcc gttggaagaa cacggtttaa cgcctttgca aatctggtgt aacgaatcgc
     2941 aagagcgtta tgtgttgtcg attttggaaa aagatttgga caccttccgc gccatctgcg
     3001 aacgcgaacg ctgcccgttt gccgtggtcg gcacggcgac cgacgacggc catttgaaag
     3061 tgcgcgacga tttgttcgcc aacaaccccg tcgatttgcc gctgaacgtc ttgctcggca
     3121 aaccgcccaa aaccacgcgt accgacaaaa cggttacgcc gtccaaaaaa ccgtttcacg
     3181 ccgacgatat cgacatcacc gaagccgcct accgcgtttt gcgcctgcct gccgtagccg
     3241 ccaaaaactt cctgattacc atcggcgacc gcagcgtcgg cggcatgacc caccgcgacc
     3301 aaatggtcgg caaataccaa acccccgtag ccgactgcgc cgttaccatg atgggcttca
     3361 atacctatcg cggcgaagca atgtctatgg gcgaaaaacc gaccgttgcc ctgtttgacg
     3421 cgcctgcttc gggcagaatg tgcgtcggcg aagccatcac caacatcgcg gcggtcaaca
     3481 tcggcgacat cggcaacatc aagctctccg ccaactggat ggcggcgtgc ggcaacgaag
     3541 gcgaagacga aaaactctac cgcaccgtcg aagcggtttc taaagcctgt caggcactgg
     3601 atttgagcat ccccgtgggc aaagacagcc tgtcgatgaa aaccgtttgg caggatggcg
     3661 cggacaagaa atccgtcgtt tcgccgttga gcctgattat ctccgcgttc gcgccggttc
     3721 aagacgtacg caaaaccgtt acgcccgaat tgaaaaacgt cgaagacagc gtattgttat
     3781 ttatcgattt gggcttcggc aaagcgcgta tgggcggctc ggcgtttggt caggtgtaca
     3841 acaatatgag cggcgacgcg cccgatttgg acgatacaag tcgtctgaaa gcgttttaca
     3901 acgtgattca acagcttgtc gccgaagaca aactcttggc ataccacgac cgcagcgacg
     3961 gcggtttgtt tgcgacgctg gcggaaatgg cgtttgcggc acgttgcggt atcagtgccg
     4021 atatagattg cctgatggat aaattcctgc cgattcatta tccggatttc caaggcgacc
     4081 cggccgaaga cttatctgac gaactttata atcatgccgc cattaaaatc ttatttaatg
     4141 aagaattagg tgcggttatc caaatccgcc aacaagatag ggattatgtt gatgcggcat
     4201 ttgaagcggc cggcttaacc ggtgcggtca gccggattgg ctctcctgat tttgacaatg
     4261 aatctatttc tttctttggt tacggttatt tcctagaaca aaaccgtgcc gacctgcaac
     4321 gcgcatggca ggaaacttct cacgccattc aaaaactgcg cgacaacccc gcctgcgccg
     4381 acagcgagtt tgccctgatt ggcgacaacg accgcagcgc attgtttgcc aacctgaaat
     4441 tcgacgtgaa cgaagacatc gccgcgccgt ttatcaacag cggcgcgaaa cccaaaatcg
     4501 ccatcctgcg cgaacagggc gtaaacgggc aaatcgaaat ggccgccgcc tttacccgcg
     4561 ccggtttcga tgcttacgac gtgcatatgt ccgacctgat ggcaggccgt ttccgccttg
     4621 ccgacttcaa aatgctggcg gcgtgcggcg gcttcagcta cggcgacgta ctcggcgcgg
     4681 gcgaaggctg ggcgaaatcc atcctgttcc accctgctct gcgcgaccag tttgccgcat
     4741 tcttcgccga cccggacacg ctgacattgg gcgtgtgcaa cggctgccaa atggtcagca
     4801 acctcgccga gattatcccg ggtgcagagg catggcctaa attcaaacgc aacctgagcg
     4861 aacagtttga agcacgcctg agcatggttc acgtccccaa atccgcgtcg ctgattctga
     4921 acgaaatgca aggctccagc ctgcctgtcg tggtcagcca cggcgaaggc cgcgccgact
     4981 tcgcgcttca cggcggcaac atttctgctg atttgggcat cgcgctgcaa tatgtggacg
     5041 gacaaaacca ggttacccaa acctatccgc tcaaccctaa cggctcgccg caaggcatcg
     5101 ccggtgtgac caacgccgac ggccgcgtta ccattatgat gccgcatccg gaacgcgtgt
     5161 accgtgccgc gcaaatgagc tggaaaccgg aaggctggac ggaactgtcc ggctggtacc
     5221 gcctctttgc cggcgcacgt aaagccttgg gctaaccgcc ctactcaaac caatgccgcc
     5281 tgaagaatat ttcagacggc gttccggcac accatccttt aaacggtatc cgtccaccga
     5341 ggaacactca tgaaaatcac acccgtcaaa gccttgaccg acaactacat ttggatgata
     5401 cagcacggca accatgccgt ctgcgtcgac ccttccgaac cctcgcccgt cttggaattc
     5461 ctcgtccgca accgcctcat gcttgcccaa acatgggtaa ctcaccccca tcccgaccac
     5521 gagggcggtg cggcggcact ctggcgcggc tacatggaat cgcccgttta cggcgaatcc
     5581 gacatcgaag cagcaaccca caccgtaacc gccggcaccc aattcacctt cggcgacgga
     5641 caggttaccg tttgggcaac acccggccac acagaccgcc acaccagcta ccttctcgaa
     5701 acttcagacg gcatacacgt cttttgcggc gacacccttt tttccgccgg ctgcggacgc
     5761 gtgtttaccg gcacaatcga acagctttac gacagcttcc aacgcttcaa ccgcctgcct
     5821 gaaaacaccc tgttctatcc ggcgcacgaa tacaccgccg ccaacctgcg tttcgccgcc
     5881 catatcgagc cggacaacgc cgacattcag acggcactga aagcggcggc gcatacgcct
     5941 accctgcccg ttaccctcgc gcacgaacgc cgcgtcaatc cgtttttgcg cgtcgacctg
     6001 ccgcacgtca gagaccgcgc cgaggcattg agcgggaaaa cgttaaacag cagcctcgat
     6061 acctttgtcg cgctgcgtga acttaaaaac caataccgga cgaaataaaa caacgggaaa
     6121 acgcagccat tcctaggatt tttattaaaa tcttaaataa aatcatacaa tcatcgccaa
     6181 tagacgaaag gacaccgttg ccttataatc aaacaaaaac aaaatatata atatagtgga
     6241 ttgaatttaa atcaggacaa ggcgacgaag ccgcagatag tacggcaagg cgaggcaacg
     6301 ctgtactggt ttttgttaat ccactatatt gttaatccac tatataaatc cagcacaaaa
     6361 cgggatcggt gattcttgtc cgcaagaatc gttgattttc tctattacac ggataatcat
     6421 catgcgcttc acacacacca ccccattttg ttccgtattg tccaccctcg gtctttttgc
     6481 cgtttcccct gcttactcat ccattgtccg caacgatgtc gattaccaat attttcgcga
     6541 ctttgccgaa aataaaggcg cgttcgccgt aggtgcaagc aatatttcca tccaagacaa
     6601 gcaaggcaaa atattaggca gggttctcaa cggcatcccc atgcccgact tccgagtcag
     6661 caaccggcaa accgccatcg ccaccctgat tcacccccaa tacgtcaaca gtgtcaaaca
     6721 caacgtcggc tacggttcca tacaattcgg caacgacacc caaaatccag aagaacaagc
     6781 ctatacctac cgcctcgtat cacgcaaccc gcacccggac tacgactacc accttccccg
     6841 cctcaacaaa ctggttaccg aaatctcacc tgccgcactc agcagcgtac ccttgcttgg
     6901 aaacggccag ccaaaggcca atgcctacct cgataccgac cgcttcccat actttgtacg
     6961 actcggctca ggcacgcaac aagtccgcaa agcagacggc acgcgtacac gaaccgcccc
     7021 ggcataccaa tacctgaccg gcggcacgcc gctgaaagta ttggggttcc aaaaccacgg
     7081 cttactcgtc ggcggcagcc tgaccgacca accccttaac acctacgcaa tcgccggaga
     7141 cagcggttcc cccctgtttg ccttcgacaa gcatgaaaac cgctgggtgc ttgcgggcgt
     7201 actcagcacc tacgccggct tcgataactt cttcaacaaa tacatcgtca cgcaacccga
     7261 attcatccgt tccaccatcc gccaatacga aacccggctg gatgtcgggc tgaccaccaa
     7321 cgaactcata tggcgcgaca acggtaatgg cgacagcacc ctgcaagggc tcaacgaacg
     7381 catcaccctg cccattgcaa acccttcgct tgccccacaa aacgacagca ggcacatgcc
     7441 gtctgaagat gccggcaaaa cgctcatcct atccagcagg ttcgacaaca aaacactgat
     7501 gctggcagac aatatcaacc aaggcgcagg cgcattgcag ttcgacagca acttcaccgt
     7561 cgtcggtaaa aaccacacat ggcaaggtgc aggcgttatc gtagccgacg gcaaacgcgt
     7621 cttctggcaa gtcagcaacc ccaaaggcga ccggctctcc aaactgggcg caggcacgct
     7681 tatcgccaac ggacaaggca tcaaccaggg cgacatcagc atcggggaag gcactgtcgt
     7741 actcgcccaa aaagctgctt cagacggcag caaacaagca ttcaaccaag ttggcatcac
     7801 cagcggcagg ggcacggccg tcctcgccga cagccagcaa atcaaacccg aaaacctcta
     7861 tttcggcttc aggggcggac ggctcgacct caacggcaac aaccttgcct ttacccatat
     7921 ccgccatgcg gacggcggcg cgcaaatcgt caatcacaac cctgaccaag ccgcgacact
     7981 gacgctgacc ggcaaccccg tcctcagtcc cgagcatgtc gagtgggtgc aatggggcaa
     8041 ccgtccgcaa ggcaacgcgg cggtttacga atacatcaac ccgcaccgca accgtcggac
     8101 cgactacttc atactcaaac ccggcggcaa cccgcgcgaa tttttcccgt taaatatgga
     8161 aaactcaaca agctggcaat ttgtcggcaa caacaggcaa caggccgccg aacaagtcgc
     8221 ccaagccgaa aatgcccgcc ccgacctgat taccttcggc ggatacttgg gtgagaacgc
     8281 gcaaacgggt aaagccgcac cgagttacag caaaaccaat atcgaatggg tgaatagtcc
     8341 aaacacccca cacaagccct cgccctatac gaatacgcca acccgcacag gggcaggcgt
     8401 accgacgatt accgcctcaa agaaggcggc aaccccggcg cctacttccc atgggatgcc
     8461 tacagcaccc aagactggga atttctcgga cataaccggc gaagcagcca tagaaaaaac
     8521 ccgccatatc gcaaatgccg ccgtatacgg ccggcccgaa taccgttaca acggcgcact
     8581 caacctgcac tatcgtccca aacgcaccga cagcacgctg ttgctcaacg gcggcatgaa
     8641 ccttaacggg gaagtcttga ttgagggcgg caatatgatt gtgtcaggca ggcccgtacc
     8701 ccatgcctac gaccaccagg ccaaacgcga acccgttctt gaaaacgaat ggaccgacgg
     8761 cagcttcaag gctgcacggt tcaccctgcg aaaccatgcc cgactgacgg cagggcgcaa
     8821 taccgcgcat ctggacggcg acataaccgc atacaatctg tccggcatcg acctcggctt
     8881 tatccaaggc aaaacaccgg aatgctaccg ctcctaccat agcggcagca cccactgcac
     8941 acccaacgcc gttttaaaag ccgaaaacta tcgtgcacta cctgtaacgc aagtacgcgg
     9001 cgacattacc cttaacgacc gttcagagct ccgcctgggc aaagcacacc tgtacggcag
     9061 catccgtgcc ggcaaagaca ccgcagtccg catggaagca gacagcaact ggacactttc
     9121 ccagtccagc cacaccggcg cactgacgct tgacggcgca caaattaccc tgaaccccga
     9181 tttcgccaat aatacacaca acaaccgctt caacacactg accgtcaacg gcacacttga
     9241 cgggttcggc acattccgat tcctgaccgg catcgtccga aaacaaaatg cccccccccc
     9301 ctcaaactgg aaggggacag ccgcggcgca ttccaaatcc acgtcaaaaa caccggacaa
     9361 gaacctcaaa caaccgaatc gcttgcactt gtgagcctca atccgaaaca cagccaccaa
     9421 gcccgattca ccctccaaaa cggctatgcc gatttgggtg cctaccgcta catcctccgc
     9481 aaaaacaaca acggatacag cctgtacaac ccgctcaaag aggccgaact tcaaattgaa
     9541 gccacgcgtg cggaacatga gcgcaaccaa caggcataca accaattaca ggcaaccgac
     9601 atcagcagac aggttcaaca tgactctgac gcgaccaggc aggcactaca ggcctggcag
     9661 aacagtcaaa ccgaacttgc ccgcatcgac agccaagtcc aatatctgtc cgcccaattg
     9721 aaacagacag acccgctgac cggcattctg acgcgtgccc aaaacctgtg tgccgcacaa
     9781 ggatacagtg ccgatatctg ccgtcaggtt gccaaagccg ccgacacgaa cgacctgaca
     9841 ctcttcgaaa ccgaactgga tacgtatata gaacgtgtag aaatggccga atccgaactt
     9901 gacaaagcac ggcaaggcgg cgatgcgcaa gccgtcgaaa cagcccggca cgcctacctg
     9961 aacgcactca accgtctgtc ccgacaaatc cacagtttga aaaccggcgt tgccggcatc
    10021 cgtatgccga acctggccga actgatcagc cggtcggcca acaccgccgt ttccgaacag
    10081 gccgcctaca ataccggccg gcaacaggcg ggacgccgca tcgaccgcca ccttaccgat
    10141 ccgcagcagc aaaacatctg gctggaaacc ggtacgcaac aaaccgacta ccatagcggc
    10201 acacaccgtc cctaccaaca aactaccaac tatgcacata tcggcatcca aaccggcatc
    10261 accgaccgtc tcagtgtcgg tacgatttta accgatgagc gcacaaacaa ccgttttgat
    10321 gaaggcgtat ccgcccgaaa ccgcagcaac ggcgcacatc tgttcgtcaa aggggaaaac
    10381 ggcgcactct ttgccgcggc agatttaggc tacagcaaca gccgtacccg atttaccgat
    10441 tatgacgggg ctgccgtccg ccgccacgca tgggatgcag gcatcaacac cggcatcaaa
    10501 atcgataccg gcatcaacct cagaccctat gccggcatcc gtataaaccg cagcaacggc
    10561 aaccggtacg tactcgacgg cgcagagata aacagcccgg cgcaaatcca aaccacatgg
    10621 catgccggca tccgtctcga taaaaccgtc gaactgggtc aagccaagct gacccccgct
    10681 ttcagcagcg attactacca tacccgccaa aacagcggtt ccgccctcag cgtcaacgac
    10741 cgtaccttac tgcagcaagc cgcccacggc acactgcata ccctgcaaat cgacgccgga
    10801 tacaaaggct ggaacgccaa acttcatgcc gcttacggca aagacagcaa caccgcccgc
    10861 cacaaacagg caggaatcaa aataggctac aactggtaac aagccgataa aaatgccgtc
    10921 tggaacccgc gtttcagacg gcatttgcgt taaaaatagt aaaccgttcc aaaagggagt
    10981 agaatagtgc cgtttccaac cctgcgcctg taccgtcagg cttttattat ggaccttccc
    11041 agttcgtttt tactgaacgc cccttccgat tccaaacgac aataaccatc ccgccggaat
    11101 gcctccccgc acacgacggg cggagcattt atgagcatcg aacacactcc tccgacacac
    11161 gacggcgaaa ccggtcaaaa ccatgccgaa cgcccttccg ctgatttcga ccgtgtccac
    11221 tccctctgcg aaatcctcga acctgccttt gaacaaatcg aaaacggcac accgctcgaa
    11281 gacgcgccgc tgcgcgacaa gctgaccgag ctgaccgtcc tcttgggcga gctgcaccct
    11341 gccgacgtgg cggcggtgtt ggaatcgctg ccgccgcgcg aacgcaacgt cgtttggctt
    11401 ctggtcaaac ccgaagacga cggcgaagta ttgctggaag tatccgacgc ggtgcgcgaa
    11461 acactgatcg agtcgatgga taaggacgaa ttgttggcgg cagttgacga tttggacgcg
    11521 gacgaattgg cggaactggc agacgatttg ccgcaccaag tggtttacga agccttacag
    11581 acgcgtgatg aggaagaacg cgcccaagtc aaggcggcaa tgtcctacga agacaaccaa
    11641 gtcggtgcga ttatggactt cgagttggtc agcatccgcg ccgatgtcgc ctgcgaagtg
    11701 gtgctgcgtt acctgcgccg cttcgacagc ctgcccgacc acacggataa aatcttcgtg
    11761 gttgacgaaa acgatgtgtt gcagggcgtg ctgcccatcc gcaaactttt ggtcgccgat
    11821 cccgaagact tggtggaaaa cgtgatggcg aaagatgtcg tgcgtttccg cgccgaagac
    11881 gacgtggaag aagcagcgca ggcgtttgaa cgctatgact tggttaccgc gcccgtcgtc
    11941 gatgaaaaca aaaagctcat cggcagggtg accgttgacg aaatggtgga cgtgatccgc
    12001 gaagaatccg aagcagatat gttgaacatg gcgggtttgc aagaagagga agacttattc
    12061 gcccccgtct tggattccgt caaaaaccgc tggatgtggc tcgccgtcaa cctctgcacc
    12121 gccttccttg ccagccgcgt catcggcgcg tttgaaggca gcatcgaaaa aatcgtcgca
    12181 ctcgccgcgc tgatgcccat cgtcgccggt atcggcggca actcgggcaa ccagacgatt
    12241 accatgattg tccgcgccat ggcgatgggg caactgacgg atatgcaggc ggggcgtttg
    12301 ctgaaaaaag aagtcggcgt cgccttggtc aacggcatca tttggggaac ggtcatgggc
    12361 gcagtatctt ggctgcttta cggcagcctc ggcatcggtt tggtcatggt tgccgcgatg
    12421 acgctcaacc tgctgctggc ggcaaccgtc ggcgtattaa ttcccgtggt aatggaaaag
    12481 ttcggacgcg atcccgcgct gggcagctcg gtgctgatta cggcggtaac ggattccggc
    12541 ggcttcctga ttttcttggg tctcgccacc ctgttcctgc tttaaatgcc gtctgaaccc
    12601 gcgcaaaaat gccgtctgaa gcggaagctg cttcagacgg catttgacta tttatccttg
    12661 ttgcacaaga ttattggacg gtatgccggg gcagcccttt ggcaacgccg accacatcct
    12721 ccccgaacag cgcgttgaca tcggtttcgt caaacacata tttgctgtgg cagaaatcgc
    12781 aatcgacttc gatgctgcct tgttccacca ccacgccgcc gacttcttcc ccgcccagca
    12841 tcagcagcat atcgctgact ttgccgcgcg aacaggtgca tgaaaattca aacgtttccg
    12901 gctcgaacac gcgcggcggc gtttcgtgga acaggcggta caaaacatgt tgcgcatcca
    12961 attctgccag ctcgtccgcc gtcagtgtac gcgccagcgt actgacgtgt tcccatgcct
    13021 cttcatccaa caccgcttca ggcagacgct gcaccagcag accgcccgcc gcttcgtcgc
    13081 ttgcagacag gacgatgtgc gtatcgattt gttcggaacg cttcatatag ttcgccaaca
    13141 tttgcgcgat accgccgcct tccaaaggca ctacgccctg ccagggttcg ccgtctttgg
    13201 gctgcagcgt cagcacgaat acgccgccct cgcccaaaag gtcgccgagg ctttcgtcat
    13261 cggctatttc tgcggtttcg tcccaacgcg cggttgcacg gacggtacgg tcggaagccg
    13321 cttccgcaac cagcattttc agccgccccc gcccctgaac ctgcacaatc agcgtgcctt
    13381 cgtttttgag gttgcccgac agcagaacac cggcagccaa cagctcgccc aaagcgcggc
    13441 ggatggcggc gggatagttt ttctgtttta caatgtgctg ccacacgttt tccagacgga
    13501 cgtgcagccc gcgcacgggc atatcgtcga agataaagcg ggtacgcaca tcggcgcggt
    13561 tgatggcggt ttgattcatg attttctctg actgattgtt cggatggcgg ctatatggtt
    13621 gcggtcggcg cgaaaacaag acggacggcg gatgcgcttc ccaaattatc aataaattat
    13681 ataaaaatca acatattaac tcaatctaac aagccgtttt ttgccaaaca gccgtttttt
    13741 tatatacaat caacaagata ttttcgactg atacagcata acatcgcacg gcggcacgat
    13801 gcctcctgcg cggaaacacc gatatggatt cttttttcaa accggcagtt tgggcggttt
    13861 tgtggctgat gtttgccgtc cgccccgccc ttgccgacga gttgaccaac ctgctcagca
    13921 gccgcgagca gattctcaga cagtttgccg aagacgaaca gcccgtttta cccatcaacc
    13981 gagcccccgc ccggcgggcg ggcaatgccg acgaactcat cggcagcgcg atggggctta
    14041 acgaacagcc cgttttaccc gtcaaccgag tccccgcccg gcgggcgggc aatgccgacg
    14101 aactcatcgg caacgcgatg gggcttaacg aacagcccgt tttacccgtc aaccgagccc
    14161 ccgcccggcg ggcgggcaat gccgacgaac tcatcggcaa cgcgatggga cttttgggta
    14221 ttgcctaccg ctacggcggc acatcgattt ctaccggttt tgactgcagc ggcttcatgc
    14281 agcacatctt caaacgcgcc atgggcatca acctgccgcg cacgtcggca gaacaggcgc
    14341 ggatgggtac gccggttgcc cgaagcgaat tgcagcccgg ggatatggtg tttttccgca
    14401 cgctcggcgg cagccgcatt tcccatgtcg gactttatat cggcaacaac cgcttcatcc
    14461 acgcgccgcg cacggggaaa aatatcgaaa tcaccagcct gagccacaaa tattggagcg
    14521 gcaaatacgc gttcgcccgc cgggtcaaga aaaacgaccc gtcccgcttt ctgaactgat
    14581 ttcccaagga atacgcaatg agtatgcccg aaatgcccaa atggtacgac gatgacggac
    14641 agatcgtgtc ctgtaccgaa aaggtcaaag tgatgtccga aaatatggcc gagctgtatc
    14701 agacggcaca agacgcgttt gaagacgcgc tgctgatggg ttgcggcgaa cgtcagttgc
    14761 gcgattacct gctcgcgctg attgaaggtt tggaaaatcc ctaccgcaaa gtctgaacac
    14821 gccccggttg ctgcggcacg gtttatccgt gccgtttttg cgtttgtgcg cggcttcggc
    14881 ttttcagacg gcatatttga cgttatgatt aaacagttaa caagatttat cacaacgccg
    14941 tcaaaagaca gacacacaac atgaacatca tccgcgcgct cctcatcatc ctcggctgcc
    15001 tcgccgccgg cgaaaccgcc gttttcctag caggcatcaa actgcccggc agcatcgtcg
    15061 gcatgggcgt gctgtttgcg cttttgcagg caggttgggt caaaacgtct tggctacaac
    15121 agcttaccga cgcgctgatg gcgaatctga cgctgtttct cgtgccgccc tgcgtggcgg
    15181 tcatcagcta tttggatttg attgccgacg attggttttc gatactggtt tccgcctccg
    15241 ccagcacttt gtgcgtactg ctggttacag gcaaggttca ccgctggata cggagcatta
    15301 tctgatgaac gaaatcctca ggcagcccag cgttctgctt ttcctcacgc ttgccgtgta
    15361 cgcgcttgcg attatcgtgc gcacgcgcac gggcaatatc ttctgcaacc ccgtactcgt
    15421 cagcactatc gtgctgattg cctacctgaa aatcctcgac atcgattatg cggtgtacca
    15481 caacgccgcg caattcattg atttttggct gaaacccgcc gtcgtcgtgc ttgccgtgcc
    15541 gctctaccaa aaccgccgta aaatcttcaa ccagtggctg cccgtcatcg tttcacagct
    15601 tgcgggcagc gttacgggca ttgttacggg gatgtatttt gccaaatggc tgggcgcgga
    15661 acgcgaagtc gtcctctcgc tcgcgtccaa atctgttacc aaccccatcg ccattgaaat
    15721 cacccgctcc atcggcggca ttcccgccat taccgccgcc accgtcatca ttgccggtct
    15781 ggtcggacag attgccggtt acaaaatgct gaagaacaca gtcgtcatgc cctcgtccgt
    15841 gggtatgtcg ctcggcacgg cttcgcacgc gatggggatt gccgcctcgc tcgaacgcag
    15901 ccgccgcatg gcggcatacg cgggactggg gctgacgttc aacggcgtac tgaccgcgct
    15961 gattgcgccg ctgctcatcc ccgttttggg attttgaacc cgtttcagac ggcatttcag
    16021 cccatgctgt ctgaacgccg acacactcgc aaggagaacc gttatggctg tcaacctgac
    16081 cgaaaaaacc gccgaacaac tgcccgacat cgacggcatt gccctctaca ccgcccaagc
    16141 aggcgtgaag aagcccgggc ataccgacct gacactgatt gccgtagccg ccggcagcac
    16201 cgtcggtgca gtcttcacga ccaaccgttt ctgtgccgcg cccgtccaca tcgccaaatc
    16261 gcaccttttc gacgaagacg gcgtgcgcgc cctcgtcatc aacacgggca acgccaacgc
    16321 gggtacgggc gcacagggca gaatcgatgc tttggcagtg tgtgccgccg ccgcccggca
    16381 aatcggctgc aaaccgaacc aggtgctgcc cttctccacc ggcgtgattc tcgaaccgct
    16441 gcccgcagac aaaatcatcg ccgccctgcc caaaatgcag cctgccttct ggaacgaagc
    16501 ggcacgcgcc atcatgacca ccgacaccgt gcccaaagcc gcctcgcgcg aaggcaaggt
    16561 cggcgacaaa cacaccgtcc gcgccacggg catcgccaaa ggctcgggca tgattcatcc
    16621 caatatggcg accatgctcg gtttcatcgc caccgatgcc aaagtttccc aacccgtcct
    16681 ccaactgatg acgcaggaaa tcgccgacga aaccttcaac accatcaccg ttgacggcga
    16741 caccagcacc aacgacagct tcgtcatcat cgccaccggc aaaaacagcc aaagcgaaat
    16801 cgacaacatc gccgacccgc gttacgccca actcaaagaa ttgttgtgca gcctcgcgct
    16861 cgaactcgcc caagccatcg tccgcgacgg cgaaggtgcg accaagttca tcaccgtccg
    16921 cgtcgaaaac gccaaaaccc gcgacgaagc ccgccaagcc gcctacgccg tggcacgttc
    16981 gccgctggtc aaaaccgcct ttttcgcctc cgaccccaac ctcggcaggc tgctcgccgc
    17041 catcggttat gccggcgttg ccgacctcga taccgacctc gtggaaatgt atctcgacga
    17101 tattttggtt gccgaacacg gcggacgcgc cgcaagctac accgaagcac aagggcaggc
    17161 ggtaatgtcg aaggccgaaa tcaccgtccg catcaagctg catcgcggac aagccgccgc
    17221 caccgtctat acctgcgacc tgtcgcacgg atacgtttcc atcaacgccg actaccgttc
    17281 ctgacccgac acggcttcag acggcataca taaaattccg tctgaaccgc cggacaacat
    17341 accatgacct ccacattccc ccgccgcctc gcccgcaaaa tccgccaaac ccgccgcctg
    17401 tcgcgcaaaa gcatcgcctt tctgttcctt ttggcaggtt cggcactcgt cgccctgacc
    17461 gcgctgtttt ttgcccatct tgccgatttt gcgctggaac tgaacgccaa actggttcaa
    17521 caatacccat ggttcgcgtg ggtcgcgctt cctttgggtt tgccgcttat tgcgtggctc
    17581 acacgcaaat tcgccccctt caccgccggc agcggcatcc cgcaggtcat cgcctcactg
    17641 tcgctgccct acggcgcaca gaaaacgcgg ctgatccgcc tcgggcagac actgctgaag
    17701 attccgctga cctttttggg tatgctgttc ggcgcgtcca tcggacgcga aggtccgtcc
    17761 gtgcaggtcg gcgcggcagt gatgggcgcg tggggcgcgt ggtgcaagaa acacggcttg
    17821 gcattcaaag ggatgcagga aaacgatttg atggcggcgg gcgcggcggg cggtttggca
    17881 gccgcgttca acgcgccgct ggcgggcgtg attttcgcca ttgaggaact cgggcgcggc
    17941 atcatgttgc gctgggagag gcaaattctt ttgggcgtgc tcgcctccgg tttcatacag
    18001 gtcgccattc agggcaacaa cccgtatttt tccggcttca acggcggcgt attggaacat
    18061 atctttctgt gggtcgcact gtccggcctg gtttgcggcg cggcgggcgg cctgttcgga
    18121 cgtttgctct atcgcggtgc ggcggcgttt gcaccgcgca agatacgcgg cttcatccgc
    18181 aaccgtccgc tgctgctggc ggcactgatg gggctgctgc tcgccctgct cggcacgttc
    18241 taccaaggca aaacctacgg caccggctac cacgaagccg cccaagccct gcacggcatc
    18301 tatgaagccc ccttcggact cgccgccgcc aaatggctcg ccaccgtatt cagctattgg
    18361 gcaggcgttc cgggcggcat tttcactccc tcgctgacca taggcgcggt tttgggcgag
    18421 catatcgccg ccatcgccga catatcgcag ggtgcaaaca tcatcgtcct catctgcatg
    18481 gcggcatttc tggcgggcgc gacacaatcc ccgattactt ccgccgtcgt cgtcatggaa
    18541 atgacgggcg gacaaagcct gctgttttgg atgctaattg cctgcatttt cgcctcgcag
    18601 gtttcgcgcc agttttcgcc gcgtccgttc taccacgcat cgggaatgcg cttccgccag
    18661 cgcgtgcttc aggaaaccac cgcccaaacc ggcaatgcgc ccgcaagacc gcaaacagca
    18721 aaacgggaat gccgtctgaa aattaaaacg cccccgatca aacgccggca gccgccttga
    18781 tttgaatacc gttccgccgc tgcttgaaac ttcaacaaca atgccgtctg aacgacagaa
    18841 tgcggttttc agacggcatt tccccatccc gatattgcct aaacaaaacc gaagcgtttg
    18901 ctataattgc actttttacc gcacacgcac gcccatgttt cccgatttct cccaaaccct
    18961 ctccaaagac cgccacttcc tgcaatccgc cttcaaaaat cccaacaaat acggcggctt
    19021 gtccaaagtc gaagaaaaat accgaaaatc gcacgaaatc tttttgaaac gtttggcagc
    19081 cttgcccaaa cccgaattcg acaacaccct gcccgttcac gaaaaacttg acgaaatcaa
    19141 aaaaaccgtt gccgaacatc aggtaacgat tatttgcggc gaaaccggtt cgggcaaaac
    19201 cacgcagttg cccaagattt gtttggaact cgggcgcggg gtagcgggtt tgatcgggca
    19261 tacccagccg cgccgtttgg cggcgcgttc ggtggcagag cggattgccg aagagctgaa
    19321 atccgaaatc ggcagcgcgg tcggctataa agtacgcttc accgaccaca cctcgcgcga
    19381 tgcctgcgtc aagctgatga ccgacggcat cctgctggcg gaaacgcaga ccgaccgtta
    19441 tctcgccgcc tacgacacga ttatcatcga cgaagcgcac gagcgcagcc tgaacatcga
    19501 cttccttttg ggctatttga aacaactcct gccgcgccgc cccgatttga aagtcatcat
    19561 cacctcggca acgatagacg cagaacgctt ctcccgacac ttcaacggcg cgcccgtttt
    19621 agaagtgagc ggacggacgt atcccgtcga aatcctctac cgaccgctga ccggcaaaga
    19681 cgaagacgac gcagaagtgg agttgaccga cgcgattgtc gatgccgccg atgaattggc
    19741 gcgatatggc gaaggcgata tcttggtatt cctgccgggc gaacgcgaaa tccgcgaagc
    19801 cgccgaagcc ctgcgcaaat ccacgctgcg ccgcaacgac gaaatcctgc ccctgttcgc
    19861 acgcctgtcg cacgccgaac agcacaaaat cttccacccc tccggcgcaa aacaacgcat
    19921 cgtgctggca accaacgtcg ccgaaacctc gcttaccgtg ccgggcatca aatacgtcat
    19981 cgacaccggt ctcgcacgcg tcaaacgcta ttccgcacgg gcgaaagtgg agcagcttca
    20041 tatcgaaaaa atctcccaag ccgccgcccg ccaacgctcc ggccgctgcg gacgcatctc
    20101 cgcaggcgta tgtatccgac tgttttcaga agaagatttc aacaaccgcc ccgaatttac
    20161 cgaccccgaa atcgcccgca gcaacctcgc cgccgtcatc ctgcgcatgg catcgctgaa
    20221 actcggcgac gtagcggcat tcccattttt agaaatgccc gattcgaggt atattaatga
    20281 tgggtttcag gtgttgctgg aattaggggc agtggaggcc gcctgaaaac aagtaggata
    20341 tacacttcta cctgacaaag accaacaaac gataaaacta cggcacatct agatgcccaa
    20401 cctacaacat tgcacacggt aaaaacatga aacacttact catcgatttt gaaaacgtcc
    20461 agccgcaaaa cttagacaaa ttactaaccg aaaataccca tatttggcta tttataggtg
    20521 tattacacaa aatgttacct attagtctgg tgcaatccct actacgtttc ggcgaacgtg
    20581 tccatcttgt ccagttacaa aaaacgggga aaaacgcatt ggatttttac ctgtcctatt
    20641 acctcggaca aattaccgcc acagacccca atgcccaaat cggcatactc tcgcgtgatg
    20701 gaggatacga tgttctggtc gaacatattt tgaaaaacca ccaagcgaag ggtatcgtgc
    20761 gcctagccaa tataaatgaa gtacaacatc agaaaattac taccgaaccg ccgtcagcat
    20821 tgctggaaaa cactcctcag cctgaaacca cactcaaacc acagcaacca ttaacttcct
    20881 atttccaagc agccctaact gcactgcgcc gccccgacgc tttccgcccc tgccgcctgc
    20941 ataacctgcg acaaaatctg cgtaagcata ttttgagtga tttgtttaaa gaaaaaaccg
    21001 atgaagaatg cgaaataacc actgctaacg ttatcaataa actcaaagca caaaacttca
    21061 tcagcattga tgaacaggaa accgtttcct accatctcag tgataatgat ttgttacaaa
    21121 gaatccaacg ccatatttta agccaacgtc ccaaaaccta cgctgatttt caagccgtcg
    21181 tgcaaaaccg agcagatgca cttcacttaa cagtcggtac caacgacatt caatcctttg
    21241 cgcgacattt gcgcgaccaa aacctgatcc gccaaaacaa tgggaaaatt gaatatgcac
    21301 cgtttactga acctaaacca cagccaacac ccaagcagcc taaaaaaacc gcatgggaac
    21361 ctgatgaaat tatttggaaa aaagtgattg ccgcgttatc gttaaagaac cgtcctaata
    21421 aaaccaaaac tttacgcaat acaatccagg cactcacaaa atccaatgca caagaaactg
    21481 acaaactgct acaacattta caagataccc aagtcctacg tattgacggt actaaaattg
    21541 tgtatatcaa gtaggatggg catttatgcc tgacctacaa aaccaaaaac aacctaacac
    21601 ccttaatcaa ctccacaaac ccttttcaga caacctcgtt ttttgaaaaa caatctgtaa
    21661 acagataact gctgaagaat accgttgccg agccccaaaa cctgcctgca acttttattg
    21721 tgaactgccc attatgaaaa aatccctttt cgttctcttt ctctattcat ctctacttac
    21781 cgccagcgaa atcgcctatc gctttgtatt cggaattgaa accttaccgg ctgcaaaaat
    21841 ggcagaaacg tttgcgctga catttgtgat tgctgcgctg tatctgtttg cgcgttataa
    21901 aacttcgcgg ctgctgattg cgctgttttt cgcgttcagc attattgcca acaatgtaca
    21961 ttatgcggtt tatcaaagtt ggatgacggg tattaactat tggctgatgc tgaaagaggt
    22021 taccgaagtc ggcagtgcgg gcgcgtcgat gttggataag ttgtggctgc ctgcgttgtg
    22081 gggcgtggcg gaagtcgtgc tgttttgtag ccttgccaag ttccgccata agacgcattt
    22141 ttctgccgat atattgtttg ccttcctaat gctgatgatt ttcgtgcgtt cgttcgacac
    22201 gaaacaagag cacggtattt cgcccaaacc gacatacagc cgcatcaaag ccaattattt
    22261 cagcttcggt tattttgtcg gacgcgtgtt gccgtatcag ttgtttgatt taagcaagat
    22321 tcctgtgttc aaacagcctg ctccaagcag aatcgggcaa ggcagtattc aaaatatcgt
    22381 cctgattatg ggcgaaagcg aaagcgcggc gcatttgaaa ttgtttggct acgggcgcga
    22441 aacttcgccg tttttaaccc ggctttcgca agccgatttt aagccg
//
LOCUS       DAWEYF010000012        22441 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.012, whole genome shotgun sequence.
ACCESSION   DAWEYF010000012 DAWEYF010000000
VERSION     DAWEYF010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.012"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            41..604
                     /locus_tag="WGN93_000341"
     CDS             41..604
                     /locus_tag="WGN93_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ0226298.1"
                     /translation="MRHLENNGYANVAGLERILAVKTDNYKEKENLLHEIFSKSRIGD
                     TELFAVDENLVKRLFLSLRGEIVFPKNETAESEFEKSVHERRQEGNAGSGRKQLLDLV
                     RRGHREYPYALPRLLAGAASYKPKKSKIRLFKEAYFGKSGTRLTDEIADGIHIYTCFS
                     RADLEKAYSEYLELFKSESDAEGRKPQ"
     gene            641..1402
                     /locus_tag="WGN93_000342"
     CDS             641..1402
                     /locus_tag="WGN93_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ0226299.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            1457..1798
                     /gene="fdx"
                     /locus_tag="WGN93_000343"
     CDS             1457..1798
                     /gene="fdx"
                     /locus_tag="WGN93_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ0226300.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(2085..2672)
                     /locus_tag="WGN93_000344"
     CDS             complement(2085..2672)
                     /locus_tag="WGN93_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ0226301.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            2885..3082
                     /gene="iscX"
                     /locus_tag="WGN93_000345"
     CDS             2885..3082
                     /gene="iscX"
                     /locus_tag="WGN93_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ0226302.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(3150..3551)
                     /locus_tag="WGN93_000346"
     CDS             complement(3150..3551)
                     /locus_tag="WGN93_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ0226303.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            3762..4721
                     /locus_tag="WGN93_000347"
     CDS             3762..4721
                     /locus_tag="WGN93_000347"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ0226304.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            4789..6099
                     /gene="tilS"
                     /locus_tag="WGN93_000348"
     CDS             4789..6099
                     /gene="tilS"
                     /locus_tag="WGN93_000348"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ0226305.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            6173..6958
                     /locus_tag="WGN93_000349"
     CDS             6173..6958
                     /locus_tag="WGN93_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ0226306.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEGKMPSEEVRRLRAVVPEGKVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGSADVWSPKVLRAGM
                     GAHFLLDIYSQADLEIWLASYKGRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            6968..7165
                     /locus_tag="WGN93_000350"
     CDS             6968..7165
                     /locus_tag="WGN93_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226307.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLFWMWWKWF"
     gene            7427..7780
                     /locus_tag="WGN93_000351"
     CDS             7427..7780
                     /locus_tag="WGN93_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226308.1"
                     /translation="MKNCKFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            7792..8097
                     /locus_tag="WGN93_000352"
     CDS             7792..8097
                     /locus_tag="WGN93_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226309.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDLVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPRENTHKDASNTGAKTH"
     gene            8159..9535
                     /gene="mpl"
                     /locus_tag="WGN93_000353"
     CDS             8159..9535
                     /gene="mpl"
                     /locus_tag="WGN93_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ0226310.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVYEGFDTAQLDEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSTFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWDVAEALAPLGGRLHVGKDFDAFVAEIVKNAEVGDHILVMSNGGFGGIH
                     GKLLEALR"
     gene            9742..10794
                     /gene="bioB"
                     /locus_tag="WGN93_000354"
     CDS             9742..10794
                     /gene="bioB"
                     /locus_tag="WGN93_000354"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ0226311.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRQHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKVDY"
     gene            complement(10872..11507)
                     /locus_tag="WGN93_000355"
     CDS             complement(10872..11507)
                     /locus_tag="WGN93_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ0226312.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRSGFVSFAPNLAAVKLNDYAKV
                     RKRITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGSHVTRAVELYRDRFISYSGGNFATYGAIKTSGISGIAPIFKIITDKQGRFVS
                     GNIIPITQIGDKIPKIDPEKTVIGRIIYLNRSDFPKGNGLDVSPDGSITRR"
     gene            11830..12090
                     /locus_tag="WGN93_000356"
     CDS             11830..12090
                     /locus_tag="WGN93_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ0226313.1"
                     /translation="MTKAVRRKNVQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(12153..14012)
                     /gene="ilvD"
                     /locus_tag="WGN93_000357"
     CDS             complement(12153..14012)
                     /gene="ilvD"
                     /locus_tag="WGN93_000357"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ0226314.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVEHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPKNRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(14185..15954)
                     /gene="cysI"
                     /locus_tag="WGN93_000358"
     CDS             complement(14185..15954)
                     /gene="cysI"
                     /locus_tag="WGN93_000358"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ0226315.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAVSDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPVRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEEFARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(15981..17795)
                     /locus_tag="WGN93_000359"
     CDS             complement(15981..17795)
                     /locus_tag="WGN93_000359"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ0226316.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFAAAANAWTDNIAALLKEEAAKNRATP
                     APQTTPPAGLQTASEGRYCKADPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(17792..19078)
                     /locus_tag="WGN93_000360"
     CDS             complement(17792..19078)
                     /locus_tag="WGN93_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ0226317.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLDCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(19117..20040)
                     /gene="cysD"
                     /locus_tag="WGN93_000361"
     CDS             complement(19117..20040)
                     /gene="cysD"
                     /locus_tag="WGN93_000361"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ0226318.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(20078..20818)
                     /locus_tag="WGN93_000362"
     CDS             complement(20078..20818)
                     /locus_tag="WGN93_000362"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ0226319.1"
                     /translation="METTLFKPALWQIPHIGSGGETALAEKTETLKQRLHRIAGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRF
                     RPVREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(20829..22271)
                     /gene="cobA"
                     /locus_tag="WGN93_000363"
     CDS             complement(20829..22271)
                     /gene="cobA"
                     /locus_tag="WGN93_000363"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ0226320.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGSVAARKISLLLDAGAQVRVVANQ
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFQLAESCQKPVNV
                     VDDRDYCSFIFPSIINRNPIQIAVSSSGSAPVLARLLREKLEALLPHSLGDMAEISGR
                     WRDAVKAKLKSVTERRRFWEKQFNGRFAALVKNQQTAQAEQELAKQLEQNYQGGFVSL
                     VGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGDRTP
                     QEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAAVGA
                     TAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALIAER
                     LQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAENAPKPALIVIGEVVGLHEKL
                     AWFGENGEGENRVGQAYPALGGLNAGQWAA"
BASE COUNT         4859 a         5821 c         6444 g         5317 t
ORIGIN      
        1 taaaatcggc atttcggatg taagcaattt tgaaggcaga atgcgccatt tggaaaacaa
       61 cggctatgcg aacgttgccg gattggaacg catcctcgcc gtcaaaaccg acaattacaa
      121 agaaaaagaa aacctgctcc atgaaatttt cagcaaaagc aggataggcg ataccgaatt
      181 gttcgccgtg gacgaaaacc ttgtaaaacg tttgttttta tcgcttcgcg gcgaaatcgt
      241 gtttccgaaa aacgaaacgg cggaatcgga atttgaaaaa agcgtccacg aacgcaggca
      301 ggaagggaat gccgggtccg gccgcaaaca actgcttgat ttggtacggc gcggacaccg
      361 ggaataccct tacgcgctgc cccggctttt ggcgggcgcg gcatcctaca agccgaaaaa
      421 atcgaaaatc cgccttttta aagaagcata tttcggcaaa agcggcacga ggctgaccga
      481 cgaaattgca gacggcatcc atatttacac ctgtttttcg cgggcggatt tggaaaaagc
      541 ctattccgaa tatttggaac ttttcaaatc cgaatcggat gccgaaggca gaaagccgca
      601 gtaaggtgca aacagatacc gtacacgttg aggagcagat atgatgggcg attccgtcat
      661 ttattatgta gaacaggcag acaaaccggt aaaccgtgcc ggcgaacgcg cccgtaaaac
      721 attcaaatat ttttggcgcg agcttttttg ggaacgccgc cgcatcattc ccgccttaga
      781 ttttgccatg gtcaaagccc cttttttcca agacggcgaa gacggcgaaa tttgcgaaca
      841 tatgtggatc gacgatattt attttgacgg tctttacatt tatggcgtgc tgaacaatga
      901 acccggcgaa ctgaccaatg tcgaacaagg cgaaagcgtt tgcgttccgg ttgacgacat
      961 cagcgactgg atgttcgtgt gcaacggcat tccctacggc ggctttacca tacaggcaat
     1021 gcgtggacag atgacggaag aggagcgtac cgaacacgat gccgcatggg gaatcgattt
     1081 cggcgatccc gggcaggtat tgctggtgta tgaagaaaaa gaacatcccg aaaatctgga
     1141 agagcatccg atgtgccgga actgtattga cgattttcgg caacagttgt cccaaaatcc
     1201 ggattttctg catgagcagg acgaagacgg ctatacgccg cttcatcatg aagccatcgc
     1261 aggaaatgca cttatggttc aagccatgct tgaatacggc gcaaatcctg cctcaaagac
     1321 atcggaaggc tataccgccc tcgattttgc ccgcctggcg ggctggcaaa atgttgccga
     1381 cctgctcgaa ccgcgacatt aggcggacag ttttccgaaa acgaacacaa acacttttta
     1441 cagaaagaca ataaaaatgc ccaaaatcac cgtacttcca cacacgacat tatgccccga
     1501 aggcgcggtt atcgaagacg cgcccgaagg caaaaccgtc cttgacgtgc tgctcgacca
     1561 tgatatcgaa gtcgatcacg cctgcgaaaa atcctgcgcc tgcacaacct gccacgtgat
     1621 tatccgcaaa ggtttcgaca gcctggaaga gccgaccgaa ttggaagaag acctgctcga
     1681 tcaggcttgg ggtttggaag ccgattcgcg cctgagttgt caggcggttg tcgccggcga
     1741 ggatttgatt gtggaaatcc ccaaatacac catcaaccac gcgcgagaag aacactgaaa
     1801 acaggccgtc tgaagccggc acgcttcaga cggcattgtt gcgcggataa ggcgcaatcg
     1861 cccgaaaaca ggcgttcgta caggcggaac tttcgattct atagtgaatt aacaaaaatc
     1921 aggacaaggc ggcgagccgc agacagtacc aatagtacgg caaggcgagg caacgctgta
     1981 ccggtttaaa tttaattcac tatatattga tttttatcgg ttttctgacg gaacggattg
     2041 gtgcggcatc cgaggcggat tactcgggcg cgatgcacgg gtatttatcg gttttgcagc
     2101 cggaaaaacc gccggcgggt tactttcagg gcggcggtcg ggcggtatgc cggatagcgt
     2161 tccactttcg cttctatatt gattttgatt ggttttctga cggaatgatc cgatgcggca
     2221 tccgggacgg cttgtgtttc ttcctgcccg cctgccggat attcctgtac ttgcacgaaa
     2281 ccgaaagagg tggcggtgcg gcggacaagc tcgagatagc gtccttcaag ctccggacag
     2341 gcggcggaca cgctttctgc cgtaaccgtg aagccgccgc ccgacccggc aaggcgttcc
     2401 gcaatctgcg tgtagatgcg ccaacgttgg gcgcgcaaca ttgccgcatc gcaaccggca
     2461 gccgctttat ccaaggcaat cagaccgcgc ctgctccggt agtgaaggca aaccgttact
     2521 ctggagagga tatgttgccc gtccaatatt tgatacagtt tgcgtatcag cagaatcagg
     2581 cggtcaaact cctccatctc cgacagggaa tcaggatggt cggaagcggt ataaaccagt
     2641 ttggacaatt ttgcggcaaa catattgttc atcaatcttc cttgtcggtt gaaaccccgc
     2701 tcttcggggc ggtagaatca gatttgtttg ggagggacaa ctcctcccag atcaggacga
     2761 cacataggct ggtgcttgat gtgttgtccg gcgagttgaa acattcagcc atcctcaagg
     2821 tgcggcagtt ttgccgaaac atattctaca cggcttcaat gccggacgat aaaaggaaat
     2881 tcatatgaaa tggaccgaca cccggcgtat cgccgaagaa ctctatgacc tgcacggcga
     2941 aaccatcgat cccagaaccg tgcgctttac ccaactgcgc gacctgatta tggcattgcc
     3001 cgaatttgac gacgaccccg cccgttgcgg cgaacgcatc ctcgaagccg tgcagcaggc
     3061 atggatagac gaggcggaat aagtttcggg aatgccgtct gaaatgcggc ggtacgcggt
     3121 tcgtgcttct gtttgcagcg ggaatggttt taccagtctc cttttttcag cctgtccagt
     3181 tggcggcggt cgcgcttggt cggtctgccg tcgggatagg cggaagtgat gcggctgaat
     3241 tggtcgagct gtttgcgctc ttccctcaat gttgccgttt tcgcgtcctc ttcatacaga
     3301 agccgcgcct cggatgccgg gcggcgttgg tggttcaaac ctttaacctt gattttatag
     3361 ggaagggaat tgagcgtcag gtcgataata tcgccgatgt ctatggtttt actgtttttg
     3421 accttcgagc cgtttacttg aaccctaccc agttcgatgt gcttttgcgc aagggaacgg
     3481 gtcttgaaaa aacgtgccgc ccaaagccat ttgtccagcc gcatggcgga agaatcgtgc
     3541 ttgtctttca tacgattttg tttgaaataa ttgaatttgt ttcaagttta gcataagata
     3601 cgccgcctat aactagtata tatgcactaa tccactgttt tccatgctgt ccgaacacaa
     3661 aaagagggtg tggaaaagcc gttttggaca ataaattaac tgcggaatat gcacaaatag
     3721 cgtatgatag cggcagaatc tgttgatgag agcttcattc tatgaaacct gtttttttgg
     3781 attttgaaca acccatagcc gaactgacca acaaaatcga tgagctgcgt ttcgtccaag
     3841 acgagtctgc cgtcgatatt tcggacgaaa tacaccgttt gcagaaaaaa agcaacgacc
     3901 tgaccaaatc gattttcagc aaacttacgc ccgcccaggt ttcacaggtt tcccggcatc
     3961 cgcagcgtcc ctatactttg gattacattg aggcactgtt tactgatttt gaagagctgc
     4021 acggcgaccg ccactttgcc gacgatcatg cgattgtcgg cggattggcg cgtttcaacg
     4081 gacaaagcgt gatggtcgtc gggcatcaga aagggcgcga caccaaagaa aaaatccgcc
     4141 gcaacttcgg tatgccgcgc cccgagggct accgcaaagc cctgcgcctg atgaaaacgg
     4201 cagaaaaatt cggcttgccc gtcatgacct ttatcgatac accgggcgcg tatcccggca
     4261 tcggcgcgga agaacgcggg cagtcggaag ccatcggcaa aaacctgtac gaactgacac
     4321 gcctgcgcgt tcctgttttg tgtaccgtca tcggcgaagg cggttcgggc ggtgcgttgg
     4381 cggtcgccgt gggcgattac gtcaatatgc tgcaatactc gacctattcc gttatttccc
     4441 ccgaaggctg cgcttcgatt ttgtggaaaa ccgccgaaaa ggcggcggat gcggctcagg
     4501 ctttgggcat tactgctgac cgcctgcaaa agctggactt ggtcgatacc gtcatcaaag
     4561 aaccattggg cggcgcgcat cgggattttg ggcaaaccat gaaaaacgtg aaagccgttt
     4621 tggaaaaaca actgcacgaa gcgcaaagca tcccgcttgc cgatttgctt tcgcgccgtt
     4681 tcgaccgcat tatggcttac ggcaaatttt cggaacaata attcaggtag aacaagcagc
     4741 aagcagtttg tctgaaactg cttgcttttt ctttatcggg acggaaccgt gctgacttta
     4801 gatgcgtttg agcaatgctt gaaggattgt tttcctcaag gtctgaatgg aaaaaaaaca
     4861 gcggtggcat taagcggcgg cttggattcc gtcgttttgc tgcatctgct tgtccgcgcc
     4921 ggaaaaaagg gcggttttat tccggatgca ttgcatatcc atcacggctt gagtccccgt
     4981 gccgacgatt gggcagattt ctgccaaaac tattgcgata tgctcggggt ggggctggaa
     5041 acggttaagg tctgcgtgga aaaaaacggt ttgggcatcg aggcggcggc gcggcaaaag
     5101 cgttatgccg cgtttgccga aaaaggcttt gacgttttgg cgttggcgca ccacagggac
     5161 gatcaaatcg aaacctttat gctggcagtc gctcgcggcg gcggtttgcg cgctttggcg
     5221 gctatgccca ccgtccgccc ttttggggaa aaaggcatca tctggcggcc tttgctgcct
     5281 ttttcgcgcc aagacatatg ggattatgcc caaaaacacg gtttgccgaa tatcgaggac
     5341 gaaagcaata gcgatacggc ttatttgcga aaccgcttcc ggcaccgtat tttgcccgaa
     5401 ctttcggcgc agattcccca tttcgggcgg catgtactga acaatgtccg cgctttgcag
     5461 gaagatttgg ctttgttgga cgaaatcatc ggtcaggact gccgttgggt ctgtgaggaa
     5521 ggcagtttcg atacggtgcg ttggcaggcg ttttccccac gccggaaaac ccatattttg
     5581 cggtattttt tgaaggaaaa cggcatcccc atgccgaatc agaatgccct tgccgacatt
     5641 gcccgggttt tgacggaggc aaaaaccgga cgttggaact tgcaaggctt tgaattgcat
     5701 cattatgcag gcaggctgtt tgtgttccga ctggaaaaaa cggataaact gcggtttttg
     5761 aaagacaggc agataagcgg aaatttaagg gaaatattga cggggcaggg atttgtttta
     5821 aaacgtcatc cgtttgggct tcctgagcat cttttggagc aggacggaat tttgaggacg
     5881 gtagcggtat cggatacgtt ggctgtcggc ggcatccata aggatgtgaa aaaaatcctt
     5941 caggggaaac gggttttgcc tgtcctgcgc ccaatttggc cgcttgttgc cgacagcgga
     6001 aaccgtccat tggcgttggc aaactgttgt gcggatttcc aatactcggt ttcagacggc
     6061 attttgcccg tccatcctga ctttcccatt ttattttgat aatatcgcaa acagatttcg
     6121 gcggcgttca gacgggtatt gtccggttgc atatttctaa aaggcttgtg aagtgaaaca
     6181 catcagttcg accaataatg aacacatccg gcacctgcac cgcctgttgt cgcaaggaaa
     6241 gttcagacgg caatacgccc aaaccgtttt ggagggcgtg cacctgcttc aggttttcct
     6301 gcaatccggc agaaaaccgg tcggggtata tattcccgag ggcaaaatgc cgtctgaaga
     6361 agtccgcagg ctgagggcgg ttgtgccgga aggcaaggtt ttttccgttt cagacggcat
     6421 attgaaaaaa atcagcagct tgacttgtgc ggatgatgtg cttgcgctga ttgatattcc
     6481 ggatgcgggt gctttgcctg ccggcggcga ctgcgtggtt ttggacggcg tgcaagaccc
     6541 gggcaatgtc ggcacggtgt tgcggagcgc ggcggcggca ggggtaggta cggtcgtttt
     6601 gggcaggggt tcagcggatg tttggtcgcc caaggtattg cgcgcgggga tgggcgcgca
     6661 tttcttgttg gacatttatt cgcaggcgga tttggaaata tggttggcga gctataaagg
     6721 ccgtgtgttt gccaccgcct tgcgagagga aaagcaggcg gttttgtacg gcgaagattt
     6781 gtgcgaaccg acagcctggg tgtttggcaa cgaaggcgcg ggggtcggta aagcggtttt
     6841 ggacagggcg gacaagtgtg tcaggattcc gatgcacgat gcaaccgagt ctttaaatgt
     6901 cgcgatggcg gcgacaatct gcctgtttga acagatgcgg cagcggtcgg cgtattgagg
     6961 aaaagaaatg ccgtctgaaa aaatctatta cggcgtattg attttcttat gtatcgcttc
     7021 tatgctgctg tcgccgtttt tttatgcggg tgctttgaag cccaagaagg cggcattgcg
     7081 gaaggacggg cagtggaaac tcatcttatt gtccaatacc gtggcggcgg cggttttgtt
     7141 ttggatgtgg tggaaatggt tttgacagat attgctcaaa attgggttaa tggaatccga
     7201 acaaataaat aatttggtaa aaaatttgtt aaatcaatgg attaaagttt ttcgggaaac
     7261 aaaacagctc taagcaaata gggcgtttgt cggtaaatac ggaagagttg cggcattatc
     7321 gggcatcttt aacaagtagt gccggcttgg caggcaattg gtttttatgg gcagcttgca
     7381 aaatcgcgga tataaaattg cgaatcggtt aaagcgtgag gataccatga aaaattgcaa
     7441 atttttttat gatccgacaa gggcaatcta tgatagcggt gcagattatt taaccagaga
     7501 aaaacataga ttagtcgtaa ttgcaaatag tgcttggggg ctattgctta atttatcttg
     7561 ttattatgac gaggttttgg aaaagcggaa aataccgttc ggcaaacagg aaattgatga
     7621 cgatatggac aaagtgtccg cccttaagcg gaagtttaaa gatatttctg aaatcaaagt
     7681 aggggatggt tgggaatacc cgttcaatta tgagcaggga atgaaagaat tagatgaagt
     7741 gctattgaaa tacattccct tttttgaaga agaacgataa aggaggttga tatgcgcgta
     7801 tctaaaataa ttggaagtat gttgcttgtt acagcggttc agaccgtatt ttcggcaaat
     7861 gtttacgcgt gccgccataa tggtaaaacc agttacagcc aaactccggg aaaacattgt
     7921 accaacgcgg gtttggggcg ggacctggtg tacagttcgg ttagaccggc agtaaaagac
     7981 agggcggaag acgcaggggt cggcgattat tcggacacgg tgagggacga acacgtccaa
     8041 aatccgagag agaatacgca taaggatgct tcgaataccg gtgcaaagac gcattgattg
     8101 aaaccgaatc agccatgacg gcgttgaata atagaatttg aacgattagg gaactctgat
     8161 gaaacacatc cacattatcg gtatcggcgg cacgtttatg ggtgggattg ccgccattgc
     8221 caaagaagca gggtttgaag tcagcggttg cgatgcgaag atgtatccgc cgatgagcac
     8281 ccagctcgaa gccttgggca taggcgtgta tgaaggcttc gacaccgcgc agttggacga
     8341 atttaaagcc gacgtttacg ttatcggcaa tgtcgccaag cgcgggatgg atgtggttga
     8401 agcgattttg aaccgtgggc tgccttatat ttccggcccg caatggctgg ctgaaaacgt
     8461 gctgcaccat cattgggtac tcggcgtggc ggggacgcac ggcaaaacga ccaccgcgtc
     8521 tatgctcgcg tgggttttgg aatatgccgg actcgcaccg ggcttcctta tcggcggcgt
     8581 accggaaaac ttcagcgttt ccgcccgcct gccgcaaacg ccgcgccaag acccgaacag
     8641 ccaatcgccg tttttcgtca ttgaagccga cgaatacgac accgcgtttt tcgacaaacg
     8701 ctccaaattc gtgcattacc gtccgcgtac cgccgtgttg aacaatctgg aattcgacca
     8761 cgccgacatc ttcgccgatt tgggcgcgat acagacccag ttccaccacc tcgtgcgtac
     8821 cgtgccgtct gaaggcctca tcgtctgcaa cggacggcag caaagcctgc aagacacttt
     8881 ggacaaaggc tgctggacgc cggtggaaaa attcggcacg gaacacggct ggcaggccgg
     8941 cgaagccaat gccgatggct cgttcgacgt gttgcttgac ggcaaaaaag ccggacacgt
     9001 cgcttggagt ttgatgggcg gacacaaccg catgaacgcg ctcgccgtca tcgccgccgc
     9061 gcgtcatgcc ggagtcgaca ttcagacggc ctgcgaagcc ttgagcacgt ttaaaaacgt
     9121 caaacgccgc atggaaatca aaggcacggc aaacggcatc accgtttacg acgacttcgc
     9181 ccaccacccg accgccatcg aaaccacgat tcaaggtttg cgccaacgcg tcggcggcgc
     9241 gcgcatcctc gccgtcctcg aaccgcgttc caacacgatg aagctgggca cgatgaagtc
     9301 cgccctgcct gtaagcctca aagaagccga ccaagtgttc tgctacgccg gcggcgtgga
     9361 ctgggacgtc gccgaagccc tcgcgccttt gggcggcagg ctgcacgtcg gcaaagactt
     9421 cgatgccttc gttgccgaaa tcgtgaaaaa cgccgaagta ggcgaccata ttttggtgat
     9481 gagcaacggc ggtttcggcg gaatacacgg aaagctgctg gaagctttga gatagcccgg
     9541 gcgatgccgt ctgaaagccc ttcagacggc atcgcccggc tgcgcggcac aaaggcggaa
     9601 aaaccgtttg ccccgtattt tcaaacgcgt tacacttgcc gccgctgttt tcagccattt
     9661 gattacccgc aaccgccgtc attgcgccgg cggtttgcct gtcagcgtca ttgcgccgct
     9721 gtaaatacga aagaacacat tatgaccgta tcccccgtcg ccttgcgccg taagaccgag
     9781 tgcaagcctc atcccaccgc gcgctattgg aaaaaatgcg atgtcgaagc cctgttcgga
     9841 cttcccttcc tcgacctcat ttaccaagcc gccgaaatcc accgccaaaa tttcaacccg
     9901 cgcgaaatcc agctttccac gctgttgtcc atcaaaaccg gcggttgtcc cgaagactgc
     9961 gcctattgtc cgcaatcggc gcaccacaat accaatctgg gcaaagagca gatgatggat
    10021 gtggatgaaa tcgtcgaaaa agccaaaatc gccaaatcgc gcggcgcaag ccggttttgt
    10081 atgggcgcgg cgtggcgcgg ccctaaaccc aaagacgtgg agacggtttc cgcaatcatc
    10141 aaagccgtca agggcttggg tatggaaacc tgcggcacgt tcggtatgct cgaagaaggt
    10201 atggcggaag acttgaaaga ggcgggcttg gattattaca accacaacct cgacaccgac
    10261 cccgaccgct acaacgacat catccacacc cgccaacacg aagaccgaat ggacaccttg
    10321 ggcaaagtcc gcaacgccgg tttgaaagtc tgctgcggcg gcatcgtcgg gatgaacgaa
    10381 acccgcgccg aacgtgccgg gctgattgcc agtctcgcca atctcgaccc gcagcccgaa
    10441 agcgtgccga ttaaccggtt ggtcaaagtg gaaggcacgc cgcttgccga tgccgaagat
    10501 ttggactgga cggaatttgt ccgcaccatc gccgtggcgc ggattacgat gccgcaaagt
    10561 tatgtccggc tgtcggcagg gcgcagcaat atgccggaag caatgcaggc gatgtgcttt
    10621 atggcgggcg cgaactcgat tttttacggc gacaagctgc tgaccacggg caatcctgat
    10681 gaggacggcg acagaatcct gatggaaaag ctcaacctgt atcccttgca gtttgaaccg
    10741 gaaggcgagg tcgccgaagt ggaaaaagcc tctgggatta aagtggatta ttgacgattg
    10801 aaaaatgccg tctgaaaccc ggaaaaaggc tttcagacgg catttgtccg gacggcattt
    10861 ccaatatctt tttaccggcg cgtgatgctg ccgtcgggcg agacatccag cccgttcccc
    10921 ttggggaaat cgctgcggtt cagataaata atccgcccga taacggtttt ctcggggtcg
    10981 attttgggga ttttatcgcc gatttgagtg atggggataa tgttgccgga aacgaaccgc
    11041 ccctgtttgt cggtgataat tttgaaaatc ggcgcaatgc cgctgatgcc ggaggttttg
    11101 attgcgccgt aggtggcaaa gttgccgccg ctgtaggaga tgaagcggtc gcggtaaagt
    11161 tcgacggcgc gagtaacgtg cgacccctgc ccgaatacga catccgcgcc ggaatcgacg
    11221 gcaagccgtg caaactcgac gacgttgccc ctgttttccc catagaagat ttcggtatcg
    11281 aacggcaggt gttccgcctg tttcccttcc gcgccgccgt ggaacatcac aatgacgatg
    11341 tcggctttct gtttggtttt ggtaatccgt tttctaactt tggcataatc gttcagtttg
    11401 acggcggcaa ggttgggggc gaaggagacg aagccggatc ttacgccgtt tttcttcagg
    11461 atggcggttt caaacctgtt ttcgatgccc gaatatttga tgttcaattc gtcaaggttc
    11521 gccctttatg ccgtttccgc accgcaaacc gccggggtca agccctcggc gcatcctgcc
    11581 ggaacggaat ccccgtactg ccgattgacg gttcaaaccc cgcgcccgtt tcaaataccg
    11641 gcgatgtgga cggacaggat gcgcctgacg aaaagacagc cgataccgtt tccattatcg
    11701 gcgtgggcga cattatgctc ggcagcaatt atccggtcga ttacctgccc gataccaata
    11761 ttctgaaaaa cgtcgaatct gccttgcaag acgcggacat taccgtcggc aacctcgaag
    11821 gcacgctgtt tgacgaaggc ggtacgccga aaaaatgtgc aaccccccaa aatatgctat
    11881 gcattccgaa cgccctccgc atacgggcaa taccttgccg acgcgggatt cgactacctc
    11941 agcttcgcca acaaccacag caacgacttc ggcgcgcaag gcatcacggc aacggcggcg
    12001 agcggcagct cttttacata ctcgatcgcg ctaaagccgc tgccgataac gaggccaaaa
    12061 ttgcggaaaa taccgccatc gcccagataa atttgtccat catcagacct ttactgttca
    12121 gacgagacag catttgccgc acgttttggg gcttatcttt cgatttgcgc tacgtcgcgc
    12181 accgcgcctt tgtcggcgga agtcgccatc gcgccgtaag ctcttaatgc ggcggagacg
    12241 tagcggtcgc ggtttttagg cttccatgct ttgctgccgc gcgcttccat ttcggcacgg
    12301 cgtgcggcaa gctcttcatc ggaaatggca aggtggatgc tgcggttggg gatgtcgatt
    12361 tcgacggtat cgccttcgtg taccaaaccg atcgcgccac cttccgccgc ttcgggcgag
    12421 gcgtgtccga tggacaaacc tgatgtgccg ccggagaagc gtccgtcggt taagagagcg
    12481 caggctttgc cgaggccttt agatttcagg taggaagtcg gatacagcat ttcctgcata
    12541 ccggggccgc ctttcgggcc ttcgtagcgg atgatgacga tgtcgccggc gacgatttgg
    12601 ttgcccaaaa tgccttctac tgcgtcttct tggctttcaa acacgcgggc gcggccggtg
    12661 aatttgagga tgctctcgtc cacgcctgcg gttttcacta cgcaaccgcg ctcggcgatg
    12721 ttgccgaaca agaccgccaa accgccgtct tgcgagtagg cgtgttcgac atcgcggata
    12781 cagccttttt cgcggtcgag gtcgagggtt ttccacatgc ggttttgcga gaacgcttgg
    12841 gtggtgcgca cgccgccggg cgcggctttg aagcgttcga tggcgcgggt gttttcaggg
    12901 ttggttacgt cccatttttc aatcgcgtct ttcagcgtcg gtgcgtggat agtgtgcacg
    12961 tcggtgtgca gcttgcccgc tttgtccaat tctttcagga tggcgaagat gccgccggct
    13021 cggtgcacgt cttccatgta gtagtcgtgg ttgttgggtg cggttttgca gatgcagggc
    13081 acaacgcggc ttaagcggtc gatgtctgcc attttgaaat ccacgcccgc ttcgttggca
    13141 acggcgagta aatgcaaaat agtgttggtg ctgccgccca tcgcaatatc catcgtcata
    13201 gcgttttcaa acgctttttt ggtggcaatg ctgcgcggta acacggtttc atcgttttgc
    13261 tcgtaatagc gtttggtgat ttcgacaatc atacggccgg cttcgaggaa caattctttg
    13321 cggccggcgt gggtcgccaa atacgaaccg ttgccgggta gggacagacc gagtgcttcg
    13381 gtcaggcagt tcatcgagtt tgccgtaaac atacccgaac acgagccgca ggtcgggcag
    13441 gcgttttgtt cgacttcctc gacttgccgg ttgctgacat tgtcgtccgc cgattcaatc
    13501 atcgcgtcaa tcaagtccaa gcggcgttct ggttggatgt ttgccacgcc gataacttta
    13561 cctgcttcca tcgggccgcc ggagacgaag atggtgggga tgttcaggcg catcgcggca
    13621 atcagcatgc ccggggtgat tttgtcgcag ttggaaatgc acaccagcgc gtcggcgcag
    13681 tgggcgttga ccatatattc gatagagtcg gcaatcaaat cgcggctggg cagggaatac
    13741 agcataccgc tgtgtcccat agcgatgccg tcgtcgatgg cgatggtgtt gaattctttg
    13801 gcgatggcgc cggctttttc gatttcgcgg gcaaccagct gacccatatt gtgcaggtgg
    13861 acatgacctg gcacgaattg ggtgaaggag ttggcaacgg cgatgatggg cttgccgaag
    13921 tcggtttcca tcacgccggt ggcgcgccac aatgcacgtg cgcccgccat attgcggccg
    13981 tgggtggagg ttttggagcg gtattcaggc atagtgtgtt tccttgtgcc tataccgtct
    14041 gaaagacagg gctgtttcag acggtatcgg gtacggtttt ttagagtggg aaaagagggt
    14101 attttatacc aagtatcgga attttgcggg attgaaacgg cgtgcggcaa aaaagaaaat
    14161 ccccgcagga atgcggggac gggttcaggc gcgggcaatc gcgacggctt tggatgcgtc
    14221 ccaaaaatca acgggtgcat ttaatacggg tttgacgatg cccgtccgta tggcgaaatc
    14281 gccgaaacct tcgccgatat tgcgttctgc cgcccatttg ccgatcaggt cgtccaattc
    14341 ggcaaggatt tcgggcaggg tgatgttttc tttgtaaaga cgggggatgc gtacgccttc
    14401 gcggtcgccg ccgatgtgga ggttgtagcg tccgacggct ttgccgacca gtccgatttc
    14461 cgccaacatc gcccgtccgc agccgttcgg gcagccggta atgcgggtaa cgatgtagtc
    14521 gtccgacgtg ccgtgtttcg ccataatctt atccagctcg ccgatgaagt ccggcagcac
    14581 gcgttcggct tccgccattg ccagcgggca ggtcggaaag gaaacgcagg acatcgcatt
    14641 ttcacgcagc ttgctgacat cgttgcggat taatccgtat gttcgggcaa attcttcgat
    14701 ttttgctttg tctgcttcgg cgacatttgc cacgatgagg ttttggttgg cggtgatgcg
    14761 gaaatcgcct ttgtggattt tggcgatttc caacacgccg gtcagaagct gtttcccgcc
    14821 ttcgtcaacc aaacgcccgc tttcgatgaa aagggttaaa tgccagttgc cgtctatgcc
    14881 tttcacccag ccgatgcggt cgccgcgccc ggtaaatttg aacgggcgta cgggttcgaa
    14941 cggcataccc atacggcgtt cgacttccgc gcggaagttg tccaagccca tattttgaat
    15001 ggtgtagcgg gtgcgggcgt ttttgcggtc gctgcggttg ccgaagtcgc gctgcgtggt
    15061 taccaccgct tcggcggcct tcagcgcgtg ttccggaggc acgaaaccca gttccagtga
    15121 aatgttcgga taggttttgg tgttgccgtg ttccatcgaa agcccgccgc ctgccaaaac
    15181 attgaagccg gcaagctgtc cgttaccgtc tgaaacggcg acgaaatcca aatcgttgcc
    15241 gtagcagtcc acatcgttca agggcgggat gacgactgcg gttttgaatt ttcgcggcag
    15301 ataggttttg cccaaaatcg gctcgtcttc ttgaaggaag tcgtcggaac tttgaacttt
    15361 tttgccgtcc acccacacat ccagataacc gcgcgtgcgc ggcagcaggt gttcggaaat
    15421 ctttttcgcg tattcgtaag cctgccggtg cagttcggac tcgatcgggt tggacgtgca
    15481 aagcacgttg cggttcatat ccgccgccgt ggcgatggaa tccaaaccca gtttgtgcaa
    15541 gaggcggtgc atcgtctgca acttggcttt cggcacgccg tgaaattgga aggtttgccg
    15601 gttggtcagc cggatggagc ggtaatgact gttttcccgg gcaaatttgt ccagttctat
    15661 ccattgggac ggtttgatga tcccgcccgg cagccggcag cgcaaaagca taaatttcaa
    15721 gggctcgagt tttgcctcgg cgcgttcggc gcggatgtcg cggtcgtcct gctcatacat
    15781 accgtggaag cggatgagtt ggaagttgtc gcctttgaag ccgcccgtga gcgggtcttt
    15841 caaatcgtcc aaaatcgtgc cgcgtaaaaa attgctttcg gttttcagac gttcgttgtc
    15901 ggatagcggt ttttcttgcc acgccaaacc ttttgtcttg gtctgtacgg tcattttgtg
    15961 ttcctcccga ttatatttaa tcaataaaca tcacgctgat agcgtttttc ttcgcgcagc
    16021 atatccaaat attcttctgc gccctcttcg tccaaatgtc ctgccccgat aatcacatcc
    16081 agcaaggcgg cttccacgtc ttttgccatt tttgccgcat cgccgcacac atagatatgc
    16141 gcgccttcct gcagccattg ccaaagtcct tccgcctgtt cgcggatttt gtcctgcaca
    16201 tagatttttt cttcctgatc gcgggaccag gcgaaatcgt acctgtgcag gaaaccgtct
    16261 ttggcaaact gctgccattc ggtttgatag agaaaatcac gggcaaaatg cggattgccg
    16321 aaaatcagcc agtttttgcc ttccgcattt tctgcggcac gttgttggac gaaggcgcgg
    16381 aacggtgcga cgccggtgcc cgagccgatc atcacaatcg gcttgcggct gtcttcgggc
    16441 agcctgaagc cgtcgttgcg ttccacaaac acgcgcaccg tgccgtcctc ttccagccgg
    16501 tcggcaagga aacccgatgc gccgcccgcc ctggcgcgcc cttcgtgttc aaaacgcacc
    16561 gcgccgacgg tcaggtgcac ttcgtccccc acttccgcct gcgacgagga aatcgaatac
    16621 aggcgcggcg caagtgggcg cagcaggccg gcgaattgtt ccgccgtcag ttttgccggg
    16681 aagcggtgca gcacatcggc aatcggcgtg ctttgcacaa agccttgcaa aacggcgttg
    16741 tcggcagcaa tacggtcgag ttcgtcatca tcggcgaacg gggcatagcc tttgacaaag
    16801 gcgggggtgt tttgcgtgag ttcaaaatgg gataacagtg cggaggcaac cggcagggtt
    16861 tttccgcccg cctgtatttc cgttgccgga tcgatgccga gcaggtctag gatttccctg
    16921 accagtgccg gatcgttgtc aaaccaaacg ccgagcgcgt cgcccgggag gtagtgcaaa
    16981 tccgaaccgc tcaaatcgat ttcgatgtgg cgcacgtctt tatcggattg gcgggcggtg
    17041 attttctgat tggccagcag ggcggcggga aaggggtctg ccttgcagta cctgccctcc
    17101 gatgccgtct gaaggccggc ggggggcgtt gtctgcggcg cgggcgttgc ccggtttttt
    17161 gcggcttctt cttttaagag tgcggcgata ttgtctgtcc aggcgtttgc ggcggcggca
    17221 aagtccaaat ccgcatcaac gcgttcgagc aggcgtttcg cccccaattc ttcaaaacgt
    17281 ttgtcgaaat ctttgcccgc ccggcagaaa ttcggatagg aactgtcgcc caaacccagt
    17341 acggcaaatt ggagtttgtc caatttcggg gcttttttgc cgttcagcag tttgtgcagc
    17401 acgacggctt cttccggcgg ttcgccttcg ccttgggtgg acgtaaccag cagcaggcgg
    17461 cgttcgccgg cgatgttttt cgccttatag tctttcagtt cggcgcgact gacttggatg
    17521 ccggcggctt ccaggctgtc cgccgctttg tcggcaacgg atttcgcatt gccggtttgc
    17581 gaggcggaaa ggacggttac ggaaaaaggt tctgccgtcg gcaatgccgt ctgaagcgcg
    17641 ggcagtcctg cagatgcccc gtttcctgct tttgcccaag cgtagccgga cagccacgcc
    17701 cattgtgccg cgtccagccc cgacaggagc tgcgtgattt cgggcggcag aggcggtaat
    17761 ggcggatttg tgttctgcat atcgtgttca ctcataaaat catacctgcc gcaacagtgc
    17821 cgtatgtcgc ttcgtctatc aggataaacg aaccggcggc ggtgttttcc gcataaggcg
    17881 ttgccgtaac gggtttttga aggttgatgc ggactttggc gatgtcgttc atcttcaagg
    17941 attccgcgcc ggcctcttgt tccagcgtgc ggacatccaa aacgctttca atttccccga
    18001 cttttgccgg cacggtttgc gtgccgtgct tgagcaggta tttgcgcgcg gtgttgagcg
    18061 gacgttcgtc aaaccagcaa agcgtggctt ccagatgttt ttgcggggcg agcggggaat
    18121 ttttatcgac aaaaaggtcg ccgcgcgaaa catcgatgtc gcggtccagc cggagggttg
    18181 ccgcctcgcc ggcaaaagcc tgcgccactt cccctttcgg cgtgatgatt tcggacactt
    18241 cggcggtcag cccgttcggt tcgatgcgga cggtttgccc gacggcgacc gaaccgcgtt
    18301 cgatgcgccc ctgatagcct cggaaatcat cggccttgtc ggcatcttgg cggacgacca
    18361 gttgcacggg gaaataaaaa tcgtcggcgg tgcggctgac ttcgtccgcc cccggcaggg
    18421 tttccaaaat ggacaataag ggttcgcctt tataccaagg catattgccg ccggggtaaa
    18481 caatgttgtc gcccaagagt gcggacaccg gtacgaaatg cacgtctttc aaaccgagct
    18541 gttcggcaag tcggcggtat gcctccacaa tggcgttgaa tttgtcttcg ctgtaatcca
    18601 gcaggtccat tttgttgacc gccaccacaa tatgcgggca gtcgagttgg cggaggatgg
    18661 cggaatggcg tttggtctgc ggcagaagct gcaagggctg cgcgccgaaa tccagttggg
    18721 atgcgtcaac cagcacgact gccgccgaag cggtgcttgc gcccgtaacc atattgcgcg
    18781 tgtattgttc gtgccccggc gtgtcggcga tgatgaattt ccgtttcgcc gtggaaaaat
    18841 agcggtatgc cacatcgatc gtaatgccct gttcgcgttc ggcttccagt ccgtcggtca
    18901 ggatggagaa gtctatggtt tctttcaaac ctttgctttt gccggattcc aaggttttga
    18961 tttggtcgga cagcagggct ttgctgtcgt agagcagtcg tccgattagg gtgcttttgc
    19021 cgtcatcgac gctgccggcg gtaatgaagc ggagcggggt ttggtgttgt gccgtcatat
    19081 tttcttcctc atatctgctt aaagggtttt tgaaatttag aaatagcctt cttttttgcg
    19141 tttttccatt gccgcctcgc ttgcctgatc gtccagccgg gtcgcgctgc gttcggaaat
    19201 gtcggcaacc gctgtttctc tgataatctc cgtcggcgtg gacgcggtgc tttctaccgg
    19261 gcaggtgcag ctgatgtcgc cgacggtgcg gaagcggaca tcaaggattt cggaggtttc
    19321 agacggcatt ttcggggtga gcggcgttac agggaccagc agccccctgc gtctgaccac
    19381 ttcgcgcctg tggctgtaat aaatcggcgg cagctcgagg ttttcgcggg cgatgtattg
    19441 ccagatgtcg agttccgtcc agttggaaat cgggaagacg cgcatatttt cgcctttgtg
    19501 cagcctggtg ttgtacagcg accacagctc ggggcgttgc gccttcggat cccattgtcc
    19561 gaactcgtct cggaacgaga aaatccgttc tttggcgcgg gctttttctt cgtcgcgccg
    19621 cgcgccgccc atcagcgcgt caaagccgtt tgcctcgatg gtttccaaca gcgtaaccgc
    19681 ctgcgccgca ttgcgcgaat cggtttcttt gcgtaaaact actgtgcctt tggcaatgga
    19741 gtcttccacg cgccccacta tcaggcgggc attgagtttt gccgcctgcg cgtcgcggaa
    19801 agcaatcact tcggggtagt tgtgccccgt gtcgatatgc accagcggga agggcagttt
    19861 taccggcctg ctgcccagcc ggaaggcttt gcaggcgagg gcgagcagga ccacggaatc
    19921 tttgccgccg gaaaagagca gggcggggtt ttcgcattcc gccgccactt cgcggatgat
    19981 gtggatggat tcggattcca accagtcgag ttgggcgttg ttcggttcgg ttttcgtcat
    20041 accatattcc ttatttcttc tgtctgatat ttatgaatta tttgtgcagc ccgcattctt
    20101 tgctgtttct gccttcccac caccaccgcc cggcgcggat gtcttcgccc gccttgacgg
    20161 ggcgggtgca ggggtcgcag cctatgctgg gaaatccttg ccggtacaaa tcgttgtaag
    20221 gcacattgtt ggcgaggatg tatgcccaca cgtcgtgttc cgaccagtcg aaaatcgggt
    20281 tgtatttgcc gatgccccgt ccggcatcgt attcggcaaa cggcagttcc gtgcgtgtgg
    20341 cggattgttc gcggcgttgc ccggtaagcc aggcgtccgc gcctgcaatg gcgcggttga
    20401 gcggttcgat ttttcggatg cggcagcatt cgcggcgcgc ttcaacgctg tcgtaaaagg
    20461 caaacctgcc tttgctttcc acataacggt cggcatcttc tcgaaccggc cggaaacgct
    20521 ttatccgcaa atggggatat gcgcgtccga gcctgtccag caggttcagg gtttccgtgt
    20581 ggagcagacc cgtatccaag gtaaaaatgc cgatattgag gttttcgccg gcgataaggt
    20641 cggtaatcac catatcttct gccgcaaggc tgctggcaaa ccgtgcatcc cggtggctgc
    20701 cggcaatccg gtgcaggcgt tgtttgaggg tttccgtttt ttccgcaagg gcggtttcgc
    20761 cgccggatcc gatatgcggt atctgccaca gggcgggttt gaacagtgtc gtttccattt
    20821 ttcccgcctt atgccgccca ttgtccggca ttcagtccgc ccaatgcggg atacgcctgc
    20881 ccgactcggt tttctccttc gccgttttca ccgaaccagg cgagtttttc gtgcagcccc
    20941 accacttcgc ctatgacaat caatgccggc ttcggcgcgt tttcggcgag ttcggcaagg
    21001 ttggcgagcg tgccggttgc ggttttttga gccggcagcg tgccttggct gataacggct
    21061 gccggcgtgt cgggcgagcg tccgtgctgt tgcagccgtt cggcaatcag ggcggctttg
    21121 agcgcaccca tataaatcac caaggtctgg cggctgcggg cgagggtctg ccattcgatg
    21181 tcgggcgcat ccgccttgcg gtggccggtt acgaaaaccg cactttgggc ataatcgcgg
    21241 tgcgtgagcg ggatgccggc ataggcggtc gcgccgacgg cggcagtaat gccggggacg
    21301 accgaaaacg gaatctgatg gcgtgccaag gtttccaatt cttcgccgcc gcgtccgaac
    21361 acgaaagggt ctccgccttt caaacgcacc acgcgcctgc cttcgcgggc cagcctgacc
    21421 ataagcgcat tggtgtcctc ttgcggggtg cggtcgcccc gggcgcgctt gccgacaaaa
    21481 atccgttccg catcgcggcg gacgagggac agtatgccgt ctgaaaccag cgcgtcgtaa
    21541 agcaccacgt ctgcctgctg gatttcctgt agccctttga gcgtcagcag ccccgcatcg
    21601 ccgggacccg caccgaccaa agacacaaaa ccgccttgat aattttgttc caactgcttt
    21661 gccaactcct gttcggcttg ggcggtttgt tgatttttaa cgagggcggc aaaacggccg
    21721 ttgaactgct tttcccaaaa acggcggcgt tcggtaacgg atttcagttt ggctttgacc
    21781 gcatcgcgcc atcttccgga gatttccgcc atatcgccca aagaatgagg cagcagggct
    21841 tccagttttt cacgcagcaa acgggcgagg acgggcgcgc tgcccgaact ggaaacggca
    21901 atttgaatcg gattgcgatt gataatcgaa ggaaaaataa aactgcaata atcgcggtcg
    21961 tccaccacgt tgaccggttt ttggcagctt tcggcaagct ggaaaacgcg ccggttgagg
    22021 gcttggtcgc tgcttgccgc aatgatgagg aaaactgtgc ggatgtgttc ggcacgaaat
    22081 tcttcggcaa gccacaggat tttgttttct gccgccagcg cacttaattc agcattcaac
    22141 tgatttgcaa caaccctgac ttgcgcgccg gcatccagca acaggctgat tttgcgcgcg
    22201 gcgaccgaac cgccgcctac gaccaatacg gggcggccgg cgaggttggc gaaaatgggg
    22261 aaataattca ctggcgaact cctttgctgt ttgcccgcac cttgtttccg atacggtgcg
    22321 tcgcggcatt tttgtcggaa tgcgggtcat tttagacaaa aggattttcc cggttaaata
    22381 ataaaaaggc atttgttaga agctgaaagc tatatgaggg cggctgcgga tgcggcggtt
    22441 t
//
LOCUS       DAWEYF010000013        22337 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.013, whole genome shotgun sequence.
ACCESSION   DAWEYF010000013 DAWEYF010000000
VERSION     DAWEYF010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22337
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.013"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(120..1034)
                     /locus_tag="WGN93_000364"
     CDS             complement(120..1034)
                     /locus_tag="WGN93_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ0226321.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="WGN93_000365"
     CDS             1290..2759
                     /locus_tag="WGN93_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ0226322.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3009..3380
                     /locus_tag="WGN93_000366"
     CDS             3009..3380
                     /locus_tag="WGN93_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226323.1"
                     /translation="MNKTLSILPAVILLGGCAVGGGNTFGSLDGGTGMGGSIVKMAVE
                     SQCRAELDRRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGSDVMQMLNPSTR
                     NQALAALTVKTVSACFKRLYR"
     gene            3453..4862
                     /locus_tag="WGN93_000367"
     CDS             3453..4862
                     /locus_tag="WGN93_000367"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ0226324.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGREALD
                     KWRGLAYPELAFEIMRLFVTDIPEGDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSEHTYVTSSPSMDISKASNFERFVFDLMDRNPL
                     EINTLWAEVAAGKGFDLRFALEKVGGKYGFTSGKSTHPDRLATIRQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4908..5702
                     /locus_tag="WGN93_000368"
     CDS             4908..5702
                     /locus_tag="WGN93_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226325.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWVRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLAVRK
                     NALMFGNLAGIPLDAQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5890..6666
                     /locus_tag="WGN93_000369"
     CDS             5890..6666
                     /locus_tag="WGN93_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ0226326.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6742..6848
                     /locus_tag="WGN93_000370"
                     /pseudo
     CDS             6742..6848
                     /locus_tag="WGN93_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7437..9908)
                     /locus_tag="WGN93_000371"
     CDS             complement(7437..9908)
                     /locus_tag="WGN93_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ0226327.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMERIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9905..11083)
                     /gene="hflX"
                     /locus_tag="WGN93_000372"
     CDS             complement(9905..11083)
                     /gene="hflX"
                     /locus_tag="WGN93_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ0226328.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLREIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(11088..12368)
                     /locus_tag="WGN93_000373"
     CDS             complement(11088..12368)
                     /locus_tag="WGN93_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ0226329.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGNGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(12521..13246)
                     /locus_tag="WGN93_000374"
     CDS             complement(12521..13246)
                     /locus_tag="WGN93_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ0226330.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGRRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13319..13996)
                     /gene="radC"
                     /locus_tag="WGN93_000375"
     CDS             complement(13319..13996)
                     /gene="radC"
                     /locus_tag="WGN93_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ0226331.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14119..15468)
                     /gene="gshA"
                     /locus_tag="WGN93_000376"
     CDS             complement(14119..15468)
                     /gene="gshA"
                     /locus_tag="WGN93_000376"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ0226332.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15728..17137
                     /gene="leuC"
                     /locus_tag="WGN93_000377"
     CDS             15728..17137
                     /gene="leuC"
                     /locus_tag="WGN93_000377"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ0226333.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17234..17488
                     /locus_tag="WGN93_000378"
     CDS             17234..17488
                     /locus_tag="WGN93_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226334.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17550..18191
                     /gene="leuD"
                     /locus_tag="WGN93_000379"
     CDS             17550..18191
                     /gene="leuD"
                     /locus_tag="WGN93_000379"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ0226335.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPSGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18360..19631
                     /locus_tag="WGN93_000380"
     CDS             18360..19631
                     /locus_tag="WGN93_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ0226336.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            19647..20378
                     /locus_tag="WGN93_000381"
     CDS             19647..20378
                     /locus_tag="WGN93_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ0226337.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNAGPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20412..21482
                     /gene="leuB"
                     /locus_tag="WGN93_000382"
     CDS             20412..21482
                     /gene="leuB"
                     /locus_tag="WGN93_000382"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ0226338.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDISYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAILAAL"
     gene            21645..22208
                     /locus_tag="WGN93_000383"
     CDS             21645..22208
                     /locus_tag="WGN93_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ0226339.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSATIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5393 a         5867 c         5813 g         5264 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcagaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agttttccgg atgatggtta tcaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcgcg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcgacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgatg gcgggaacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctggggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttgtggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcgg aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggtggcg ggatttttta ttttcccgat tgaagtataa tgtcgccgga ttcaaccgga
     2881 tattcaaacg gtttactcca acactcggaa cggcgcataa aacgccgccc tgcgcgttat
     2941 cccgaacggg gcggctaatc agatcctatc gccataaacg gcggggggtc aaccgaaaag
     3001 gaattgagat gaataaaacc ttgtctattt tgccggcggt aatcttactc ggcggctgcg
     3061 ccgtcggcgg cggtaacaca ttcggcagct tggacggcgg cacgggtatg ggcggcagta
     3121 tcgtcaaaat ggcggtcgag agccaatgcc gcgcggaatt ggacaggcgc agcgaatggc
     3181 gtttgaccgc gctggcgatg agtgccgaaa aacaggcgga atgggaaaac aagatttgcg
     3241 cttgcgtcgc ccaagaagcc cccgaacgga tgaccggcag cgatgtgatg cagatgctga
     3301 atccgtccac gcgcaatcag gcacttgccg ccctgaccgt caaaacggtt tccgcctgct
     3361 tcaaacgcct ataccgctaa ccttcttcag acggcatgaa gcaaatgccg tctgaatccg
     3421 ttttcccaca atttcgacag acgagaaaaa tcatgaaata tatcagcacg cgcggcgaaa
     3481 ccgcacacaa accgttcagc gaagttttat tgatggggct tgcacccgac ggcggcctga
     3541 tgctgccgga acattatccg caaatcgggc gggaagcctt ggacaaatgg cgcggtttgg
     3601 cttatcccga attggcgttt gaaattatgc gcctgttcgt taccgacatt ccggagggcg
     3661 atttgcgcga cattctgaac cgtacttaca cggaagcggc gttcggtact aaggaaatca
     3721 cccccgtccg cacgctttca gacggcatca aaatccaagc cttgtccaac ggcccgacgc
     3781 tggcgttcaa agatatggcg atgcagtttt tgggcaatgc gtttgaatat gttttaaaca
     3841 aagaaggtaa aaaactcaat atcttgggcg caaccagcgg cgatacgggt tcggctgcgg
     3901 aatatgcctt gcgcggcaaa aaaggcgtga acgtatttat gttgtcgccc gacggtaaaa
     3961 tgagcgcgtt ccaacgcgcg cagatgtaca gcttgcaaga cgagaatatc cacaatatcg
     4021 ccgtgaaggg gatgtttgac gactgtcagg acattgtgaa ggcggtgcag aatgatgccg
     4081 cgttcaagga aaaataccat atcggtacgg tcaactcgat caactgggga cgcatcgtcg
     4141 cgcaagtggt ttattacttt gcaggctatt tcaaagcgac gcaaagcaat gacgagcaag
     4201 tcagcttctg cgtgccgagc ggcaacttcg gcaacgtttg cgcgggacac atcgccaaac
     4261 agatgggttt gcctatccgc cgcctgattg tcgcgaccaa tgaaaacgat gtgttggacg
     4321 agtttttcaa aaccggcgca taccgcccgc gcaacagcga gcatacttat gttacctcca
     4381 gcccgtcgat ggacatttcc aaagcgtcca acttcgagcg tttcgtgttt gacctgatgg
     4441 atcgtaatcc tctggaaatc aatacgctgt gggcggaagt ggcggcggga aaaggctttg
     4501 acctgcggtt tgctttagaa aaagtcggtg gcaaatacgg ttttacctcc ggcaaatcca
     4561 cccaccccga ccgcctcgcc accatcagac aggtttatga gcaagaccaa gaactcatcg
     4621 acccgcacac tgccgacggc gtaaaagtcg cccgcgaagt gcgcgaagaa ggggaaacgg
     4681 ttgtgtgttt ggaaaccgcg ttggcagcga aattcgatgc gaccatacgc gaagccgtcg
     4741 gcgatgccgc cattccgcgc cctgccgcgc tggaaggttt ggaaaacctg ccgcagcgcg
     4801 tgcaaaccgt gccgaacagt gcggatgcgg taaaaggcat catcgaacaa acccttgcct
     4861 gatattccgt acaggggcat tccgtccgaa cttaagattg aaagaaaatg accttaccta
     4921 tgcaggaaac ccgtttttct atactgctgg acgaactggc ggcaaaacag gaggcagcca
     4981 tcgctcccca cctgcttgcc gacggaacca aggtatgggt acgcaaagca ggcaggcaca
     5041 atgcgcggtg gcgttacgcg ctgctcggta tggttgcccg atatttgaaa ctgggggtgt
     5101 tgaagccggt tcccagcctc ggcggcgagc ctgccattgc aaccgaatca aaacgcctgt
     5161 acgaattgcg ctcggcgggg atagccgttc ccgaattgct cgccgtcagg aaaaatgccc
     5221 ttatgttcgg caatttggca ggcatcccgc tcgatgcgca aatccgccaa gaagccgaag
     5281 ccggaaaggc ggacgcttgg cttgccggtt tggaagccat tgcacgcgtg cataaaaaac
     5341 agcagttcct cagtcaggcg tttgcacgaa atatgatgtc ggacggaaaa aacatcagct
     5401 ttttggattt tgaagacgac ccttccgagg tcctgaccat agcgcaatgc caagcccgcg
     5461 attggctctg ctacattcat tcgaccgcgc tgatattgaa aaacggcgga ctgctggaag
     5521 cggctgcgga aaaatggggc ggcgtattgt cagatcagcc tgccgaaata caaaagctga
     5581 ttgccgccac cgtcaaaccg atcctcccga tacgcaggct ggaacacccc cgctggggac
     5641 gggacgcgct caggctggca gcctcgattt ccctgatttc ccttgccgat atgccgccgt
     5701 aagccgccgc ccgccccacg atgccgtctg aagcccttca gacggcatat aaccaacgcg
     5761 catcaagcat tgtcgcaacc atccgtttcg tttagaattt tggctttacc ccgaatcggg
     5821 cagacatttt cactctgccg cacatcccga acaagcacta tccatttctt ttactgacag
     5881 gaaacccaaa tggcagcatt caatacccaa aaagtattgt ccgtacacca ctggacagac
     5941 gcatatttta cctttacctg cacccgcgac gaatcgttgc gctttgaaaa cggacagttc
     6001 gttatggtcg gattgatggt ggacggcaag ccgctgatgc gcgcatacag cgtcgcctcc
     6061 gccaactggg aagaacacct cgaatttttc agcattaaag tccaagacgg tccgctgacc
     6121 agccgcctgc aacacctcaa agtcggcgac gacgtgttaa tcagcaaaaa accgaccgga
     6181 accctggttg ccggcgacct gaatccgggc aaacaccttt acttgttgag caccggtacc
     6241 ggcatcgctc ctttcttgag catcaccaaa gaccccgaaa tttacgagca atttgaaaaa
     6301 atcatcctcg tacacggcgt gcgctacaaa aaagatttgg cgtactacga ccgctttacc
     6361 aaagaattgc ccgaacacga atacctcggt gacttggtta aagaaaaact gatttactac
     6421 ccgattgttt cgcgcgaaga attcgaacac cacggtcgcc taaccgacct gatggtgagc
     6481 ggcaaactgt ttgaagacat cggcctgccc aaaatcaacc cgcaagacga ccgcgccatg
     6541 ctgtgcggca gccccgcgat gctgaaagat acctgcaaag ttttggacga tttcggactg
     6601 accgtctctc cgaaaacagg cgtacgcggc gattacctga ttgagcgtgc gtttgtagat
     6661 caataagctg tttgaaaatc ccgtctgaac ggcaccagca atcaaaaacc ccgaatcctg
     6721 ccaatcagga ttcggggttt ttatagtgaa ttaaatttaa atcaggacaa ggcggcgagc
     6781 cgcagacagt acaaatagta cggcaaggcg agccaacact gtaccggttt aaatttaatt
     6841 cactatatag tgggtaaaaa ttagaaatgc acatttccgt cattccaaca caggtgggaa
     6901 tccggactta cctgtttcat tatcgtttga aaataaaaga gaaaccaaac atatagattc
     6961 ccgcttgcgc gggaatgacg acggtgtttt gccgtagcca aagcagaaaa acatccctat
     7021 tgtcatttca tcatgatatg acaataggat gttaaaaatt aattatcatt atatgattga
     7081 tatataagaa aaactgtccc aataagaaat gttatgcaga aaataaaatg aaaaggatgg
     7141 ttttcattga aaatggttgt tctgccaccg tcatacacag agccagtatt tggaaaaaaa
     7201 tgatccatat tgacatcatt attccatttg tcgcataaat ccacttttta attttttcca
     7261 cattaatata atctcttatt taataaaatc aaaataaaaa tcaaatgcct aacaattcga
     7321 tctcaaattt tgaacgccaa cgtgtttgag cggtaacaat acatacttta agtttgcaat
     7381 tcttcatcgt cttatttttg ttttcatcaa ctatacgtct aaagcaacgc cgtccgtcat
     7441 tgttcggacg gcattttttc agactgcatt ttcccccgtt tgtgaaggcg cagggcgttg
     7501 cccaaaaccg ccagcgaact gaagctcata cccagtgcgg ctatccacgg ttggacatag
     7561 cccaaaacgg caagcggtac ggcaatgata ttgtacgcgc ccgcccatat caggttttgc
     7621 cggataatat ggcgggtgcg ccgcgcctga tcgagcaggt gggcgacggt acgcaaatct
     7681 tcgttcaata acacaatgtc cgcgccgtcc ctcgcaatat ccgtcccgcc cgctgcggcg
     7741 gcggatacgt ctgcctgcgc caaaacgggc gcgtcgttga tgccgtcgcc tatcatcagc
     7801 acttttttcc cttctttttg caaggctttg acgtattcca gtttgtcctc gggcatggct
     7861 tgggcgcggt agtgcgcgac acccagggcg cgtgcggttt cggcaacggc ggtttcgcgg
     7921 tcgccgctga ggatgtgcag ggtcaggttt ttgcctgcca actgccgcac cgcctccgcc
     7981 gcgctgtctt tcaaggggtc ggtcaggtag aacacggctt ggaaaccgct ttgactgccg
     8041 aggtaaaccg cgctgccgcc gccttctgtt tgcggttctt tacctgaaat ttcggcgaca
     8101 taggatgccc tgcccaatgc ccaaacctgt gtttcgccgt tgacggtcag ttgcgcgccc
     8161 acgccttcgc cgatgcggtt gaggcgttgt ttaatagcga tgtcggggac gctgccgtct
     8221 gaaatgcggc agttgaggat ggcgcgggca aggggatgtt cggactgttg ttctaaagcc
     8281 tgcgccaccg cgagaacaaa ggcttcgtct gtgcctctca acaatgagat acggcggacg
     8341 gcgggtttgc cttgggtcag cgtgccggtt ttgtcgaaga tgatgtcggt ggtttgggcg
     8401 agggtttcga ttgcctgctt tccgccgatt aaaatacctt cgcgcgccag cgtaccggta
     8461 gaagctgcca gcgcggtcgg cgtggcaagc gataaggcgc aggggcaggt aatgaccagc
     8521 agggcgacgg taatccacaa tgcggtgtgc gcgtcggcgt acagcgtcca gccgatgaag
     8581 acggggacgg caagcaggag ttcgccgaat atgaaagacg aggcgtattg ttccgccaac
     8641 tcggcagtgc gcggtttttg cgctaaggcg cggtcgagca ggcggacgat gtgcgacagt
     8701 cgcgtgccac cgccggtgcg gtcggtgcgt ataatcaggg ggctttgcgt gttgagtgtg
     8761 ccggcggtta ctttttcaga cggcattttg gcgacgggca ggctctcgcc ggtcagcata
     8821 gattcgttga cggcactgct tccttccagc accgtgccgt caacggggat ggtttcgccc
     8881 ggtttgacca gcacgatatc gcccgccttc aatttgacga cagctgcctc gcaggtttcc
     8941 tgcgtatcgg ggtaatcggg catatgatgg caaaacgcag gaatcagctt caccagcctc
     9001 tcggcggcat cgcctgcctt acggcgggca atgcgttcca taaagcgtcc gcccagcagg
     9061 aaaaacagca gcatcgcgat ggattcgaaa tacatcccct gccccgcatt tgtcgcaagg
     9121 ctgtaaacgc cggcgataaa ggtcatgatg atggcgacgg taatcggcgt atccatgccg
     9181 acgcggcggt ttttcaagtc gcgcagcgcg ccttgataaa acgggacggc gcaatagaat
     9241 acgacgggca gcaccattaa aaagccgccc caatggagga tttgcaggaa atcgggttcg
     9301 atgtcgccgc cgtaaaggta ggtcggcagc gcgaacatca tcgtctgcat catccccagc
     9361 ccggcaacgg cgaggcggac gatgtattgt ttgcgttctt tttggttggc ggcttcgatt
     9421 ttttgcgcgt catagggtgc ggcggtgtag cctatctgcc tgattttcaa cagaatgtcg
     9481 gaaaggcgga ttttgccgtc gtcccagacg acgcggcagc ggtgcgtgct gtaattgagg
     9541 tcgatgcgga cgatgccgtc tgtacgcaaa agctgctgtt cgatcagcca gacgcaggcg
     9601 gcgcaggtga tgccgccgag cattaaaacc gcctcgcgcg tgccgccgtg ggtttccaca
     9661 aagtcggact ggacttcggg caggtcgtac aggcggattt ggtcgaggat ttcttggggc
     9721 ggcagctcgg ttttttgcgc gtcggcggtg cgttgtttgt aataactgcc caagcccgcg
     9781 tcaataatgc tttgtgcgac cgcctgacag ccggcgcagc aggtttcgcg gtcttcgttt
     9841 tcgtaacgga cagtcaggtg gaggtgttcg ggaacatcca gaccgcagtg gaaacaggtt
     9901 tttttcatgg catttcggtt tcgtctgtgt ttggtgcggc ggcacaagac tcggcaatgg
     9961 cttcgcgcag tgcgtctata ccggtatttt cagcaacgga aatgcggacg gcggcaattt
    10021 ttcccgcagc gtcgcgccat atgcccgtgt tttgttcttc agacggcagc aggtcggttt
    10081 tgttgtacac cttgatgcac ggaatatcgc cggcatggat ttcccgcagt acgttttcca
    10141 cgtcttcaat ctgctgtccg ctgttcgggg cggcggcatc gacgacgtgc agcagcacat
    10201 cggcttgcgc ggtttcttcc agcgtggcgg aaaatgccga aatcagtttg tgcggcaaat
    10261 cactgacgaa tccgacggta tcggtcagga taatgctgca ttcgggactg atgtacagcc
    10321 gccgcgccgt ggtgtcgagt gtggcgaaaa gctggtcttt cgcatatatg cccgacttgg
    10381 tcagccggtt gaacaggctg gatttgccga cattggtata gccgaccagc gcaaacgttt
    10441 tgattgtgcc cgattcgcgg ggcttgcggc gcagggcgcg ctgttttttg aggttgacaa
    10501 gctgtttttt caaggcattg atccgatggg cgatcaatcg gcggtcggtt tccagtttgg
    10561 tttcgccggg gcctttcatg ccgataccgc cgcgctggct ctgcagatgg ccgtaaccgc
    10621 gtatcaagcg tcccgccaaa tggctcaatt gcgccaactc gacttgcagc ctgccttcct
    10681 gcgtgcgggc gcggcgggcg aaaatcgcca gaatcagccc taccctgtcc aatacgcggc
    10741 atttcagttc tttttcaagg ttgcgttcct gcgtgggcgt gagttcgtgg ttgaatacga
    10801 ccaaatcgat gccgtctgcg gcaactgctt ctgacagctc cgccgccttg cccgtgccga
    10861 caaacagcgc ggtgtgcgga cggtcgcgtt tggcagtctc cacgcgcacg gaatcgccgc
    10921 ccgccgcttt gaccagctcg acagcttccg ccaatgccgt ctgaaaaccg ttcagacggg
    10981 tggcactgct gcccgtgcca tctttgtcca acattacgcc caccagcatg acgcgttcgg
    11041 gttgcgcttg ggtactgccg ttgcggcctg ttctgcctgt catgtattca atcctgtaaa
    11101 taaagggtta cgcctcgttc cgtttctcct tccggtgcaa gcgtgatgcg gctgcccgcc
    11161 attccgtcaa cgctgaagac gatgccgccc gcctcgtgcc ttcctatgga caggcggctg
    11221 ccgggtcgct gccggtaggt ataacgggta cacgcttcca aacaccagcg tccgcgccag
    11281 tggatgaaat atttttcgcc ttttctaacc gcaagtgtct cgccgccgtt tacctcaaaa
    11341 taagggtaat cgggttttcg ggttctaaac tgccatttcg cctgcgcgcg ccgtccgttg
    11401 cggacatagt cgaataccgc cgtataaagc gtaccgtatt ccaaaggctt gagcgggaaa
    11461 agcgcgaatt ggtacgcggt cagcctgccg ttggggtcgt tgccggcggt taaaaccctg
    11521 acggggcgga tttcgttttt accctgatac agcttgaaac ttttcatcgt aattttgcct
    11581 gccgcctcgg aaaaatcaat gctggcagga ttgcccgtga tttcatattc cggcacgggg
    11641 tctggacgct cgccgtggaa ataaggcagt gcgccgttgc cgacgggata ggctgtatag
    11701 agcagctcct gtgcgggcat ggcttcgtcg gtgtacacga ccgcaccgtt atggcaggcg
    11761 ttgcggtaat atttccgtcc tgcttccggc tgatttctgc cttgggcgca atgccgctca
    11821 aacctgccgt tgccctgatt gaatacgaga acggttttac cgttttcgcg cacaaatgcc
    11881 gctcctgcct catccgtatg gcggtcaagt agggaaaggc ggtggtagat tgcgctcatt
    11941 aatccgtcca cttggcgttg ctgcgtgcgg atgtcgctgt cggacgattc ggcggcttcc
    12001 tcttccgtgc tgatgttttc atgcacgccg ttgtagagat acccggcaag gcgtgtgcgt
    12061 tcggtcagct tttgtgcggt gtagtgcgga ttgtcgggat ggtgttcgcc gtgtccgtct
    12121 tcgggattga gcgtgagata gcgtgcgtgc ctgcgggcgg aattttccaa aaccggcgcg
    12181 tgtgccagct tgtgcaaacc gatttgggct cggatgcggt tgaggtagtg cagcgcatcg
    12241 ccgccgtccc tgatttgcgg tgcggacgga tagacaagtt cgcccgcggg cagggattgg
    12301 ttttgggtat ggtagaaaac gcctgccgcc gaacccaaca ggagcagccg aataaaaagg
    12361 gatttcataa tgccgtcctc ccgacgcggc aacggggtgt tttatcaaaa cggcaaactt
    12421 gccaatgcgg tttccgattg cagattgcca aaccggcaaa cctttccccg tgccgatgcc
    12481 gaacccgatg ccgtctgaac cttcagacgg catcgggtgt ttatttgtcc acccggatgg
    12541 gggcaggttc gtattgtgtc gattcgtcgc cgtaatacag cacgccgagt ttgatgggaa
    12601 tgcgtccctg cgatttgcgg tgggcattgg aatcgcgcaa ggaataggcg caaccgcaat
    12661 attcctgctg gtagaagttt tcacgtttgc tgatttcaat catgcgcgcg ctgccgccgc
    12721 ctttgcgcca gttgaaatcc caatacacca catcatcgta aggcgcggcg gcacggcggc
    12781 cgcagtcgtt gatttgcgcc atatttttcc agcgtgaaat gcccagcgaa ctggtaaaga
    12841 cggggaaccc gtgttcatgc gcgtattgcg ccgccttttc aaaacgcata tcgaaacaca
    12901 tggtgcagcg gatgccgcgt tccggctcaa actccatgcc tttggctttg gcaaaccatt
    12961 ctttgcggtc gttttcgtag tcgtcgtctt tatcgatgaa aggaatgccg aacttttccg
    13021 caaagcgcac gttttcctct tttcggagca tatactcttt gtgcggatgg atattgggat
    13081 tgtaaaaata aatggtgtag tcgatgccgg aggcaagcat cgcctccatc acttcgccgc
    13141 tgcacggggc gcagcaggaa tgcagcaaga cttttttatg tccgccgggc gggacgagta
    13201 tggggcggtc aatgtcggta acggtaggtt tgttttgtgt ttccattaac ttaacaatat
    13261 ctgtcgaata cggttgaagc ggctatttta tcagagccgc cgcatgtaaa acagggggtc
    13321 agggcatcag cccgagctgc ctgaacgaac ggacggtttg cgccgttacg ataaaatggt
    13381 cgagcagcga cacatcgacc agcgacattg cctgtgccag ccgccttgtg aacatgatgt
    13441 cttcctgcga aggttcgggc gagccgcccg gatggttgtg cgcaataatc aggctgtcgg
    13501 catattcgtc caatgccagt ttgacgattt cgcggatgta aatcgtgttt tccgcaaccg
    13561 taccgcgcga cagctctctg accgcaatca gttggttttg gcggttcagc agcagcgcga
    13621 cgctgacttc gactttttcc tgccccaaat gaaagcgtaa ataatcggcc accgtatccg
    13681 gatcggacag gacgatgctc tcctgcaatt cttccgccaa tatccgccgc ccgatttccc
    13741 tgaccacggc aaactgtgtg aaacttgccg tccccatccc tttgtatgcc gacagttttc
    13801 cgacctccgc gctcatcagc ctccccaaac tgccgaactc ctgcagcaaa taacgcgcca
    13861 aatcgaccgc actcattccg cgcgtgccga cgcgcagcag gattgccaaa agttcggcat
    13921 cactcaacgc cgccgccccg cgttccaaca gcttttccct gggtctttcg ccttccggcc
    13981 attgcttgat gctcatgttt tccctttttt aaatagtctg agatgccgtc tgaaacagat
    14041 gttcccacac gccaaatatc cgaaatgccg tctgaaccgg atttccgctt cagacggcat
    14101 ctgtatttca aaacagtctt acgccgtttc ttccaactcg attgaagccg ccagaagcga
    14161 caggcgtgcc attacgccgt aaacgtagag gcggttgtgt tcgttgtcca cgtcgcagtc
    14221 tttttcagag cgcggcatac ccagcgagtc ccattgttcg aatacgcgct tgcaggcttc
    14281 gggcgcttct tgggaattat cgccgttacc ggtaggaatg ctgttagaca gcggaacaaa
    14341 caccataccg ccggcgttga ggttttcgtc cgcaccgcgc ccttcgtgta cgcggaaaaa
    14401 gccgccgatg acgaagcggt ccatcatata cacgacgggt tcgcacaccg cgccgtttaa
    14461 ggtttcataa gtataaatcc cttcttggac aatcacttcg ctgacttcca agccttcttt
    14521 gactttcgcc attttattgc ggtttttacg gttcaatccg cgcacttcgt cggcggattt
    14581 gacgctcatc acgcccatgc cgtaagtgcc ggcatcggct ttgacgatga cgaaaggttt
    14641 gtcggtaatg cccgattcgt cgtatttggc ttgaattttc gccagcacac gttctaccgc
    14701 ttccgccaac gcgtcttcgc cttcacgccc ttggaagtcc aaaccgccga ttttttcaaa
    14761 ataagggtta atttgccatt cgtcgatgcc gattaacttg gcaaattcgg cggtaacttg
    14821 gttgtacgcg ccgaaatgat ttgttttgcg gcgcgtcgtc caaccgccgt gcaacggcgg
    14881 caaaacggtt tggctgatgc ctttgaggat gtcgggaatg ccggcagaca aatcgttgtt
    14941 caacaaaacc acgcaaggcg aaaagccgtc tgcaagatgg acgcggtcgc gggtacgcaa
    15001 taaaggttcc aacaggattt tgtcgcccaa tgcagtttca aattcggtcg gttcggttac
    15061 ttccggattc aggctgccca agcgcacttc ataccctgcc gaacgcaaaa tctcgccgag
    15121 ggcgtaaatg ttttgcaggt aaaacgtatt gcgcgtgtgg ttttcgggaa taatcaatac
    15181 ggatttcgcc gtttcgcagg cgcgttgcac cgcatcttgc gcggcaaccg ccgccagcgg
    15241 gataaagttg ggattcagat tattgaagcc gccggggaac aaattcatat cgatagacga
    15301 aattttgtaa ccggcattgc gtatatcgac cgaaccgtaa aacggcgggc ggtgtacgct
    15361 ccactgcgtg cggaaccacg cctcgatttt ggcgtgattg gacaggattt ttgcctcaaa
    15421 cgcctgaagt tgcgccgaat gttcgggcga catcaccggt aatttcatct ttcgtctgcc
    15481 tctgtgtgtt ttttgacaag atgcagatga taatgccttt gaaagaatga cgacaagtat
    15541 tctttcgtat cgaatcatgc tttagatata actgtttact gaaatggaca atacgtctaa
    15601 ttttttcgtt aaaattgttt gcaaaataac accggctcaa aaattagaca aaatttgttg
    15661 cgcggtataa agaatacgtc taaaatccgc ccaatccgca ttaccattta tccaaaagaa
    15721 caacatcatg acagcacaaa ccctctacga caaactttgg aacagccacg tcgtccgcga
    15781 agaagaagac ggcaccgtcc tgctctacat cgaccgccat ttggtgcacg aagttaccag
    15841 ccctcaggca tttgaaggct tgaaaatggc ggggcgcaag ctgtggcgca tcgacagcgt
    15901 cgtctccacc gccgaccaca acaccccgac cggcgattgg gacaaaggca tccaagaccc
    15961 gatttccaag ctgcaagtcg atactttgga caaaaacatt aaagagtttg gcgcactcgc
    16021 ctattttccg tttatggaca aaggtcaggg catcgtacac gttatgggcc ccgaacaagg
    16081 cgcgaccctg cccggtatga ccgtcgtctg cggcgactcg cacacttcca cccacggcgc
    16141 attcggcgca ctggcgcacg gcatcggcac ttccgaagtc gagcacacga tggcgaccca
    16201 gtgcattacc gcgaaaaaat ccaaatccat gctgattgcc gttgacggca aattaaaagc
    16261 gggcgttacc gccaaagacg tggcacttta catcatcggg caaatcggca cggcgggcgg
    16321 tacaggctac gccgtcgagt ttggcggcga agccatccgc agcctttcta tggaaggccg
    16381 catgacttta tgcaatatgg cgatcgaagc cggtgcgcgc tcaggcatgg ttgccgtcga
    16441 ccaaaccacc atcgactatg taaaagataa acccttcgca cccgaaggcg aagcgtggga
    16501 caaagccgtc gagtactggc gcacgctggt gtctgacgaa ggtgcggtat tcgacaaaga
    16561 ataccgtttc aacgccgaag acatcgaacc gcaagtcact tggggtacct cgcctgaaat
    16621 ggttttagac atcagcagca aagtgccgaa tcctgccgaa gaaaccgatc cggtcaaacg
    16681 cagcggtatg gaacgcgccc ttgaatacat gggcttggaa gccggtacgc cattaaacga
    16741 aatccccgtc gacatcgtat tcatcggctc ttgcaccaac agccgcatcg aagacttgcg
    16801 cgaagccgcc gccatcgcca aagaccgcaa aaaagccgcc aacgtacagc gcgtgttaat
    16861 cgtccccggc tccggtttgg ttaaagaaca agccgaaaaa gaaggcttgg acaaaatttt
    16921 cattgaagcc ggttttgaat ggcgcgaacc gggctgttca atgtgtctcg ccatgaacgc
    16981 cgaccgcctc gcaccggggc aacgctgcgc ctccacctcc aaccgcaatt ttgaaggccg
    17041 tcaaggcaac ggcggacgta cccacctcgt cagccctgcc atggcagccg cagccgcagt
    17101 gaccggtcgc tttaccgaca tccgcatgat ggcgtaagta ttttcaggcg gtctttaaga
    17161 atttgacgcg gccgtctgaa atatgtcccg taaggcagaa acacctttaa tattcaaacc
    17221 aaggagttta accatgaaca aacttttcat taccgccctg tccgccctcg ccttgtccgc
    17281 ctgcgccggc acttgggagg gcgcgaaaca agacaccgcc cgcaaccttg acaaaacaca
    17341 ggccgccgcc gaacgcgccg ccgaacaaac aggcaacgcc gtcgaaaaag gctgggacaa
    17401 aaccaaagaa gccgtcaaaa aaggcggcaa tgccgtcgga cgcggcattt cccatctcgg
    17461 cggaaaaatc gaaaacgcca ccgaataacc gattcgcgat gccgtctgaa accgcttcag
    17521 acggcatcgt cagcacaaga cgcaaaccca tgaaagcctt taccaaaatt accgccatcg
    17581 tcgccccgct cgaccgcagc aacgtcgata ccgacgccat catccccaaa caatttttaa
    17641 aatccatcaa acgcagcggc ttcggcccca atgcctttga cgaatggcgt tacctcgacc
    17701 acggcgaacc gggcatggac aacagcaaac gcccgttgaa ccctgatttc tcgctgaacc
    17761 agccgcgtta ccaaggcgcg caaatcctgt tgacgcgtaa aaacttcggt tgcggctctt
    17821 cacgcgaaca cgccccttgg gcattggacg actacggctt ccgcgccgtc atcgccccca
    17881 gcttcgccga catcttcttt aacaactgct acaaaaacgg ccttttacct atcgtgttga
    17941 ccgaagaaca agtcgatcgg cttttcaaag aagttgaagc caacgaaggc tatcagctct
    18001 ccatcgacct tgccgaacaa accctgacca caccaagcgg cgaaacattc acattcgaca
    18061 ttaccgaaca ccgcaaacac tgcctcttaa acggcttgga tgaaatcggt ctgaccctgc
    18121 aacacgccga cgaaattcac gccttcgaag aaaaacgccg ccaaagccag ccttggctgt
    18181 ttaacggtta agcctatgcc gtctgaagac cgttcagacg gcattcctga taacatataa
    18241 ttgctgcaac taatgtaaac agaggggcta taaattgctt tcatctttca agcgggctta
    18301 gcaacgctct aaattaatgc aatacagctc tatttcaaat aaatttttag atttttaata
    18361 tgcaacagat taaatttatt gacttatttt ccgggatgag cggtatcagg aaaggatttg
    18421 aacaagcctg tcggaaacag tcggttgctt gcgaatgtgt ttttacctca gaaatcaaac
    18481 cggcagcttt ggaagtattg aagcaaaact accctgatga agtgccgtat ggagatataa
    18541 cgaaaattga aacgggagat attcccgatt ttgacatctt gttggcaggc ttcccttgcc
    18601 aggctttttc tttcgccgga aaaagattgg gctttgaaga tacgcgggga acgcttttct
    18661 ttgatgtggc aaggatttta aaggcaaaaa aaccaaaagg ttttattttg gaaaatgtgg
    18721 aaggattggt gacgcacgat agaaaagatc cgacacaaaa aataggacgc accctgaccg
    18781 ttattttgga aaccttggaa acattgggct actatgtttc ttggaaagtt ttaaatgcaa
    18841 aagatttcgg cattccccaa aacaggaagc gcatttatct gacaggcagt ttgaaatcca
    18901 aacccgactt gtcttttgaa acaaccctaa gtccgaaatt aaaaaatatt ttggaatcgg
    18961 gactgcctac cgaaagcagt cctttcatca aaaaattgct aaagaaattt cccccgtccg
    19021 aactgtacgg aaaatcagta aaggacaaac ggggagggaa aaacaatatc cacagttggg
    19081 atattgaatt aaaaggcaca gtaaccgaag aagagaagca attattaaat atgcttctaa
    19141 aagaacggag gaagaaaaaa tgggcttcag aaatcggcat cgattggatg gatgggatgc
    19201 ctttgacaaa agcgcaaatt tcaactttct ataaacaccc caatcttcaa aatattttgg
    19261 acagcctgac agataaaggc tatttggttt tggagcatcc gaaacaaaaa attggcgggc
    19321 gaagaatcaa agatgaatcc ctgcccaaag gctacaatat tgtttcagga aaaaaatcat
    19381 ttgaaatcaa taaaatatta gacccaaatg atgttgcgcc aaccttagtt gcaatggata
    19441 tggagcacct tttcgtcgtt gacaacggcg gtttgcgcac acttaccgga aaagaaggtt
    19501 tacgcttatt cggctatccg gacgattatt cgtttgatat tcctaaaaaa gacaaatacg
    19561 atttattggg caataccgtt gccgttcctg tgattaaggc ggtatctgaa aggcttctgc
    19621 atactttata aaccgatagg gataaaatgg taaaacttac tgcacaacaa atatttgata
    19681 agttgctgaa tgaggaaaaa atcttatcgg tcaatggtca aattagattt ttcttgggcg
    19741 atgtggatat tatcgtcaaa caaaaagatg tcgtcggcaa catcattcaa gaatggctcg
    19801 gcggatggtt gagaaaaagg gaaattgaat ttgatgtttc aaccaatacc caaatgcccc
    19861 ccgatttctt tttaaataaa aaagaccgca gtagagaatt gttggaagta aaggcgttca
    19921 accgaaatgc cggcccgggt tttgatattg cagattttaa aatgtattct gatgaaatca
    19981 ttcataaacc ctatatgctg gatgtagatt atttaatatt cggttacgat atggacgaca
    20041 acggcaatgt aaccatcaag gatttatggc ttaaaaaagt atggcaaatt acgagaagca
    20101 tggatgggtg ggcaattaat cttcaagtca aaaaaggcgt ggtgcataaa atccgcccgg
    20161 gtgtttggta cagcataaat aaaaagaata tgcctatgtt tgaatgcttg gaagattttg
    20221 tttccgcaat tgaagaaacc gtttatcaaa acccggcaac acggcataac gcatccttat
    20281 ggaaaaagaa atttgaggaa gcctataaaa aacactacaa ccgatcgatt tccatacctc
    20341 gttggcacga aattgcacac aaatacaaaa agaaataacc cttcaaccat caacccataa
    20401 ggaaacttga aatgaccaaa catatcgcca tcctccgagg tgacggcatc ggtcccgaaa
    20461 tcgtcgccga aaccgtccgc gtactcgaca aactcatcgc ccaaggcttg gacatcagct
    20521 acgaatacgc cccattgggt ggtgaagcct acgacgaata cggccatcct tatcccgaat
    20581 ttacgcaaaa cctctgccgc aaagccgatg ccgtcctgct tggtgcagtc ggttctcctc
    20641 aatacgacaa cctcgaccgt ccgttgcgcc ctgagcgcgg cctgttggca atccgtaagg
    20701 atttgaacct gtttgccaat ttgcgtcctg ctgttttata tcccgaatta gccaacgcct
    20761 ccacgctgaa gcctgaaatc gttgccggtt tggatatttt gattgtgcgc gaactcaccg
    20821 gcgacatcta tttcggcgaa ccgcgcggca tccgcgttct ggaaaacggc gaacgcgaag
    20881 gctacaacac catgaaatac agcgaaagcg aaatccgccg tattgcccat gttgccttcc
    20941 aatccgccca aaaacgcagc aaaaaagtct gttccgtagg caaagccaac gttttggaaa
    21001 ccaccgaact gtggcgcgaa atctttgaag aaatcggcaa acaatatccc gatgtcgaac
    21061 tctcccatat gtatgtggac aacgccgcta tgcagctcgt gcgcgcgccc aaacaatttg
    21121 acgtgattgc caccggcaac atcttcggcg atattttatc ggacgaggcc tctatgctga
    21181 ccggctccat cggtatgctg ccttctgctt ctttggacga aaacggcaaa ggcctgtacg
    21241 aaccgtctca cggctccgct cccgacatcg ccggacaaaa caaagccaac ccgctggcca
    21301 ccatcctctc gctcgcaatg ttgctgcgtt acagcctgaa cgacgaagcg cgcgcgcaac
    21361 aagttgaaaa cgccgtccaa aaagtgctgc aacaaggctt gcgtaccagc gacatttacg
    21421 aagaaggcac aaaactcgtt tcctgctccg aaatgggcga tgcgatactc gccgccttgt
    21481 aaaaaaacaa agcgcggatc acaccgcgct ttttcatctg cccttttccg cccgcaccgt
    21541 tcgtcaaccg cctgcaaacc caccgtttac cggcaggaaa tgccataaat ccccgcctat
    21601 gttaggataa acacctttat cggcccacac aaaggattat catcatgaaa aaaatcatct
    21661 tcgccgcact cgcagcggca gccgttggca ctgcctccgc cgccacctac aaagtggacg
    21721 aatatcacgc caacgcccgt ttcgccatcg accatttcaa caccagcacc aacgtcggcg
    21781 gtttttacgg tctgaccggt tccgtcgagt tcgaccaagc aaaacgcgac ggtaaaatcg
    21841 acatcaccat ccccgttgcc aacctgcaaa gcggttcgca acactttacc gaccacctga
    21901 aatcagccga catcttcgat gccgcccaat atccggacat ccgctttgtt tccaccaaat
    21961 tcaacttcaa cggcaaaaaa ctggtttccg ttgacggcaa cctgaccatg cacggcaaaa
    22021 ccgcccccgt caaactcaaa gccgaaaaat tcaactgcta ccaaagcccg atggcgaaaa
    22081 ccgaagtttg cggcggcgac ttcagcgcca ccatcgaccg caccaaatgg ggcgtggact
    22141 acctcgttaa cgttggtatg accaaaagcg tccgcatcga catccaaatc gaggcagcca
    22201 aacaataaat cttgatgcga atcagcacaa atgccgtctt catcaaaccg ccccgccaac
    22261 ggtaagccga tatggcggag cacaatccgc cgaaagatat ttcagcggca ggcagggctt
    22321 gccggaaagt ccggaaa
//
LOCUS       DAWEYF010000014        21728 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.014, whole genome shotgun sequence.
ACCESSION   DAWEYF010000014 DAWEYF010000000
VERSION     DAWEYF010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21728
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.014"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            66..617
                     /locus_tag="WGN93_000384"
     CDS             66..617
                     /locus_tag="WGN93_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226340.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
     gene            complement(881..1430)
                     /locus_tag="WGN93_000385"
                     /pseudo
     CDS             complement(881..1430)
                     /locus_tag="WGN93_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(1879..2436)
                     /locus_tag="WGN93_000386"
     CDS             complement(1879..2436)
                     /locus_tag="WGN93_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226341.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLGIWHGDRVFMH"
     gene            complement(2680..2838)
                     /locus_tag="WGN93_000387"
     CDS             complement(2680..2838)
                     /locus_tag="WGN93_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226342.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2835..3677)
                     /locus_tag="WGN93_000388"
     CDS             complement(2835..3677)
                     /locus_tag="WGN93_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ0226343.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNGPADERVLLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKIQRPQGYRLLGIFEEGKHNAVAVCGFHEACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3915..4835
                     /gene="pyrB"
                     /locus_tag="WGN93_000389"
     CDS             3915..4835
                     /gene="pyrB"
                     /locus_tag="WGN93_000389"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ0226344.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4845..5303
                     /locus_tag="WGN93_000390"
     CDS             4845..5303
                     /locus_tag="WGN93_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ0226345.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            5368..6033
                     /locus_tag="WGN93_000391"
     CDS             5368..6033
                     /locus_tag="WGN93_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226346.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(6096..7313)
                     /locus_tag="WGN93_000392"
     CDS             complement(6096..7313)
                     /locus_tag="WGN93_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ0226347.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            7455..8000
                     /gene="def"
                     /locus_tag="WGN93_000393"
     CDS             7455..8000
                     /gene="def"
                     /locus_tag="WGN93_000393"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ0226348.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            8087..9013
                     /locus_tag="WGN93_000394"
     CDS             8087..9013
                     /locus_tag="WGN93_000394"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ0226349.1"
                     /translation="MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLRKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            9092..10351
                     /gene="rsmB"
                     /locus_tag="WGN93_000395"
     CDS             9092..10351
                     /gene="rsmB"
                     /locus_tag="WGN93_000395"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ0226350.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAILRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLAAEGIPARALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            10317..10916
                     /locus_tag="WGN93_000396"
     CDS             10317..10916
                     /locus_tag="WGN93_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ0226351.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10916..13033
                     /locus_tag="WGN93_000397"
     CDS             10916..13033
                     /locus_tag="WGN93_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ0226352.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLISTASLSGNMGRVLEHY
                     ANGFTQLSLYNAASGKIEKSINPHKLDQPFPDKARWEKIQQAGSVRDLESIGGVLYAQ
                     GWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLL
                     IASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKL
                     FNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQ
                     ILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKILL
                     GKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAERL
                     AWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALIG
                     DVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVKS
                     EAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRIS
                     LSNQDAGGACVRIILPKTVETYA"
     gene            13026..14303
                     /locus_tag="WGN93_000398"
     CDS             13026..14303
                     /locus_tag="WGN93_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ0226353.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVGAAVKRASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            14394..15581
                     /gene="dprA"
                     /locus_tag="WGN93_000399"
     CDS             14394..15581
                     /gene="dprA"
                     /locus_tag="WGN93_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ0226354.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEA
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            15607..16068
                     /locus_tag="WGN93_000400"
     CDS             15607..16068
                     /locus_tag="WGN93_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ0226355.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            16140..18446
                     /gene="topA"
                     /locus_tag="WGN93_000401"
     CDS             16140..18446
                     /gene="topA"
                     /locus_tag="WGN93_000401"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ0226356.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAESCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(18519..19214)
                     /locus_tag="WGN93_000402"
     CDS             complement(18519..19214)
                     /locus_tag="WGN93_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226357.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFQ"
     gene            19905..20282
                     /locus_tag="WGN93_000403"
     CDS             19905..20282
                     /locus_tag="WGN93_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0226358.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            20371..20940
                     /gene="rsmD"
                     /locus_tag="WGN93_000404"
     CDS             20371..20940
                     /gene="rsmD"
                     /locus_tag="WGN93_000404"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ0226359.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVFSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PNIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            21063..21314
                     /locus_tag="WGN93_000405"
     CDS             21063..21314
                     /locus_tag="WGN93_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ0226360.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            21411..21494
                     /locus_tag="WGN93_000406"
     tRNA            21411..21494
                     /locus_tag="WGN93_000406"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21445..21447,aa:Tyr,seq:gta)
     gene            21525..21598
                     /locus_tag="WGN93_000407"
     tRNA            21525..21598
                     /locus_tag="WGN93_000407"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21557..21559,aa:Gly,seq:tcc)
     gene            21608..21682
                     /locus_tag="WGN93_000408"
     tRNA            21608..21682
                     /locus_tag="WGN93_000408"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21640..21642,aa:Thr,seq:ggt)
BASE COUNT         5359 a         5472 c         5995 g         4902 t
ORIGIN      
        1 agtttgtcct agttatctag gacagcccct tgttttttgt tcggcggctt gcgtggtcgg
       61 gtaaaatgaa agttttgaac ggttggtcgg acaggaagat gtggcgggtt ttgagtgctt
      121 tgccgatagg cgtggtgttt tttgatttga tctacggttt tgtgttgaat gtgttgcagg
      181 gtttggattt gcagcgtgcc gtgccggatt cggaaggcgt gttggcggtt acgcccgata
      241 ttgcattcaa cagtttgcag attgtcgcca acggcggtat ggcggcggtg gtctgtttcg
      301 ggttggcggt tgtgtttttg ctcaaccgtt cggtgcggcg gcggcaggtg ttggaaatcg
      361 gggtgttccg gatgttgggg ctggtggcgg tattggcgtt cagcgcgccg tcggtgtggg
      421 agtgggcgaa cgcgctgccg ctgctgctga agggcgcgga cgtggtcaat acggggaatg
      481 cgcgttatgt gctgacggct ttgtgtatgc cctttccggc ggtgtcgtgc gtcatcgggc
      541 tggtggggcg gttcaggctt cagacggcat cgggcagggc ggcaaagtca gggggtgcgg
      601 gcaaggcgga cggataggac gcatttttca gcgggtgcgt cgagaagcag ccgatgtgtt
      661 tggcagccgc agcttggggg ggtagtgcta atggcggttt ctttgctttt atagtggatt
      721 aacaaaaacc agtacggcgt tgcctcgcct tagcccaaag agaacgattc tctaaggtgc
      781 tcaagcacca agtgaatcgg tttcgtactg tttgtactgt ctgcagcttc gtcgccttgt
      841 cctgattact atataaaata aatgggcaaa aatcggttta ttatcgtttt tgccgcattt
      901 ggatttgttc taccgtaaaa cgtgtttgac gaacgggatt cttattaaaa aaacatctga
      961 tttctaacaa aatcagtatt ttttggcacg atggctaaaa tttttccttc catttcgcca
     1021 tcacgtgttt tccatgcgct caagaattgt gatttgctca ttgagacgtg ccccagcgat
     1081 ggatcagcca gcaaaacagt ttctccgtta ataccgttca ataccgaaaa atggttgttt
     1141 ttacggtatt ttaaatacac aattacagga atttttagtt gtaccaactg ttcaaatggc
     1201 aaagcataac cttgtgcttc aaaacccagt tcgggcatta tgcgttgcat atcatcaaaa
     1261 gaagcacgca tttgggtttt atccattttg tctaagattt ccgcttcaga ataatgtctg
     1321 ccataaaaat tattcagtaa cgtggcaatc gaagccgcgc cgcaagaaaa atccaaatct
     1381 tgttttacta tgccggaatc tcgccgtgct ttccaactcc gtacatggat gttttggtaa
     1441 gaagcggggg gtcaacaaac ataggccaag caaaaactat atttggggcg aaaccaatca
     1501 aagccgcata atttatcaat ttataaagat tttttatcat aatatgtata cgcggaataa
     1561 acgcatgaaa cataaaaaaa taaaatcata tgcaatttta ttgcatgaat aaatatgaat
     1621 aaaatagata atgatgggag taaatacgcc atgtattttg gaagtttaaa tttattaata
     1681 ataaaataat ttatcgtagc gcaaataaat cccaaaattg gaacgattag aaaaaaaatt
     1741 aatacaccca tcatcatgca aactctatat taataaatag ctaactaatt ctattgtgga
     1801 aattagttag ctaactaaaa gttattaatg attattttcg agaattgact gcattgttgg
     1861 cagcattggc accaaaacct agtgcatgaa tacccggtct ccatgccaaa ttcccagcca
     1921 atccgcctcc ggcagcagca gccagccctg ttttgccgct actcctgttg ccgcaccgat
     1981 tcctgccgca gtagccgcgc cttgcgcagt tcctaattta ccatgattat acaaattagc
     2041 accatgatac tcccatgcac ctaatgcacc gccaaaagca gcggctgcaa taatgggaac
     2101 aaattcacct tgtgtttctt tcatttcagc ctgtgataat tgaattgctt tcacattttg
     2161 gctgtcaaaa acttggctgt ctaaattttg cgccattaca ggtgtaatca tcatagccat
     2221 tacagttgca attttcgttg cgctggtttg cacataaata ggattagcaa attcgctttg
     2281 attgcgttca gtgttgatgt agctaatact gctttctagt ttgaatttac ccttgtcagt
     2341 caataattct tccaaactta aaggtaagtc agcataagca atttggctgg caacagttaa
     2401 aataaaatct attagacatt tgtgtttttg catcatttcg tttgattttc tagtttttga
     2461 gaatgataca aagtttttta caaagtaaag agtcactctg aaaaacattt tttcattata
     2521 aatcaaaata ttgatagaat aaatagcgag catcgattca cggtgcactt tagtgcaaag
     2581 cgtacaacgc gagcctgaac caccagccgc aacaggaaaa gaaagccgat agagtgcaat
     2641 gcttgccaac gtgcaagcga gcttgcaaga acgcttggct caacgagagc aggcaagaca
     2701 gaaagcagaa agcaggatag gagcggtaac gcaaaggtct cgggctttga tttcgccgta
     2761 aaccctgctg ccgccttgtc cggaaagggt gcaggcggcg agtgccgaca gggtgcagat
     2821 ggggaggggg gttttcattt ggggtcgcaa cggaagtggt atgcgcagat ttcaaaaccg
     2881 tttttgaaat acaggcggtg cgcgtcggca cggtcgtggt tgacgtggac gttgaggtgg
     2941 attttggtta cccctgtttc cgcgccgatt ttgcggactt cttccaaaag gcgcgaggcg
     3001 tagcctttgc ggcggctttg cggcagggta acgatgtcgt cgatgtggat gtggcggccg
     3061 ccggcgaggg tgcaggcttc gtggaagccg cagacggcga cggcgttgtg tttgccttct
     3121 tcaaaaatac ccagcaggcg gtagccttgg gggcgttgga ttttgttgat ttgttcggta
     3181 aagcggttga tgtcggtcag ggcggaacgc aaaacgctca aggctgcaaa ggcggtggcg
     3241 gtgtcgtccg cgccgatttc gcgcaaaacg taggatgcgc ccgaggcggt ctgttcctgt
     3301 gctttttcgg cggcgtgttt ttcttcgatt gcctgtgcca gcaggacgcg ttcgtcggcg
     3361 gggccgtttt gtccgccctg ttcgcgttct tcgagcaggg ctttgcagtc gatgacgcgc
     3421 aggtcgttgt cggcggcaaa gtccatcagg aagcggaaca tttggggatt gtcggtttcc
     3481 agttttttat cgacggcgac gcagcggatg ttgtccacca gcatggggcg cacccatttc
     3541 gagtaggaga ggcggttgtc tttggtgaac gaggacagga tgccgcacag gcgttccgcc
     3601 cagtcgctgg gacggaaaat cttgccggaa ctcgttgtgc cgtggatgac gacttcgtag
     3661 gggttgcaga ctaacatggc ggcttcctga aaagaaatgt ctggcgcgat tataccttat
     3721 gcttatgcgg gcgtgtttgg atatgccgtc tgaaaagtac gggattcgtg cggtaaaact
     3781 ttgcggcggc aaatgtgcga taatacgcgc cgtattgccg cttttgcgaa gctgttccgc
     3841 aaacatacgg gcggcgtgga cgacgtataa ccggataccc gcctgacgcg ggttttttac
     3901 ggaagggggc aaaaatgcct aatccgcttt acagacagca catcatctcg atttcggatt
     3961 tgtcgcgcga acagttggaa tgcctgcttc agacggcatt gaagctgaag gcgcatccgc
     4021 gcggcgattt gttggaaggc aaacttatcg gttcgtgctt ctttgaaccg tccacgcgca
     4081 cgaggctgtc gtttgaaacg gcggtgcagc ggctgggcgg caaggtcatc ggcttttcgg
     4141 acggcgcgaa taccagtgcc aaaaaaggcg agacgcttgc cgataccgcc cgcatcattt
     4201 ccggctacac cgacgcaatc atccaacgcc accccaaaga cggcgcggcg cgcgtggcag
     4261 cggagttttc gcgcgtcccc gtcatcaacg ccggcgacgg caccaaccag caccccagcc
     4321 agaccttgtt ggatctggta acgatttatg aaacgcaggg gcgtttggac aagctcaaaa
     4381 tcgccatggc gggcgacttg aaatacgggc gcaccgtgca ttcgctttgt caggcgttga
     4441 aacgctgggg ctgcgaattt gcctttgttt cgccgcccag cctcgcgatg cccgactaca
     4501 ttaccgaaga gttggacgaa gccggctgcc gataccgtat cctcggcagt ttggaagagg
     4561 cggcggaatg ggcggacatc ctgtatatga cccgcgtcca gcgcgaacgt ttcgatgaac
     4621 aggaatttgc caaaatccaa ggcaaattca atctcgacgc atccatgctt gcccgcgcca
     4681 aaccgaacct gcgcgtgctg caccctttgc cgcgcgtgga cgaaatccat cccgatgtcg
     4741 atgctacgcc gcatgcctat tatttcgagc aggcgaccaa cggcgtttat gcgcgtatgg
     4801 cgatattgtc gctggtgttg aacgaagaag tgtgaggaac cgatatggaa accccgaaac
     4861 tcagtgtcga agccattgaa aaaggtacgg ttatcgacca tattcccgcc ggcagggggc
     4921 tgaccatcct gcgccagttc aaacttttgc actacggcaa cgcggtaacc gtgggcttca
     4981 acctgcccag caaaacccaa ggcagcaaag acatcatcaa aatcaaaggc gtgtgcttgg
     5041 acgacaaagc cgccgaccgc ctcgccctgt tcgcccccga agcggtggtc aataccatcg
     5101 acaatttcaa ggtcgtgcag aagcggcatt tgaacctgcc cgacgaaatc gccgaagtgt
     5161 tccgctgtcc gaacacgaat tgcgccggcc acggcgagcc ggtcaaaagc cggttttatg
     5221 ttaaaaaaca caacgggcag acgcggctga aatgccatta ctgcgaaaaa acctacagcc
     5281 gggattcggt ggcggaagcc tgacggattc ccttaaaccg agcgggcggc atttcgtctg
     5341 ccgcttgttt tgccaatctg aaatggaatg atgatgcacg cttctgtcca aagccgtttc
     5401 gcaccgatac tttatgtttt gattttcttt gccggttttt tgaccgcgca aatctggttc
     5461 aatcagaaag cctatactga agagctgcct ccgcttctgt ccgcattgtc cgctgtcgcg
     5521 ctggtgtggc tggcgtgggc gttcgtgtcg gcgcgttcaa aggctaaggc ggaaaagttc
     5581 taccgcgaaa aaatgataca gaacgaaagc atacatcccg tcctgcacgc ttctttgcaa
     5641 cacttggaac acaagccgca aatgctcgcc ctgctggtca aaaaccacgg caaagggatg
     5701 gcggaacagg tcaggttcaa ggcggaagtg ctgcccgacg acgaagacgc gcgcacgatt
     5761 gccgccgagt tggcaaaaat ggatatgttt gcattgggga cggacgcggt cgcctcgggc
     5821 gaaacctatg gacgcgtgtt cgccgatatt ttcgagttgt cggcggcttt ggaagggcgc
     5881 gcgttcaaag gaatgttgaa actgacggcg gaatataaaa acatcttcgg cgatgcctgc
     5941 cgttcggaaa cggcgttgga gttgggcgcg ctcaatcagg cgttgcagga gatttcaaaa
     6001 acatcggaaa agtccaaacg gatattttat tgaagatgga aaaatgccgt ctgaaacgga
     6061 aggtgtttca gacggcattt ttgtcggatg attaattatt cggagcggtt gaagccaaac
     6121 ttcacgcggc tgcggccctg atccggtata ttgtccaaat cgcgtcccgg attggcggcg
     6181 gtgtcgccta cggaaatatc ggagatgttt tccaaaatga tggcggacga caggtgttcg
     6241 gaggtgcggt aaaccattgc caagcccact tcttcggcag gagtggaaat cagctcgacg
     6301 gtatccctgc ttttgaaatt gttggagagg tcgacctgca tcgttttctt gcgtttgtag
     6361 aggctcaaaa ccgtgccttt gtccaaaccg tccgcctcgc ctttgtcgat ggtgatggtt
     6421 tgaaactggc cggcaatcct tgtgccttca aacacggaaa cgattttagc ctgaaccggg
     6481 cgggacggtt cgtgcggcat catgttgaag cggtcggtgt cttccggcat tttcatcagg
     6541 tagtcgccct gctgtatttc ggaaatggcg gtttcgacca ccagcggctg tatcgaaggg
     6601 gtgcgcagcg gggtaatcaa aggatgggtg cgggtatggt attcgttgtc tttcggccgt
     6661 tctccagcct gtttcgagcg ttgttcgagg acagagtcgg tatagtcgag ggagcgcacg
     6721 atgccgctga atgcgacttc ctgcccgagg aatttacccg tatccggatc ggtgatgttt
     6781 ttattgattc ggtaggtcag gtagcggccc ggctctttca ggcctttggt gtaaaccctg
     6841 gtgcctttgg tgtacagcag cctgccttcc gggcccgaga gcaggcgcgg cgcggcagcg
     6901 gtttctttgc gggaaacgat ttgcgggtgc cgcataaaga tgcggtagaa gttgacatcg
     6961 atggcgggaa taccgtatcc ggacacttcc ttatccggac tcattttgac gacggggatg
     7021 ccgtctgtct gttccaagcc gaggcgcggt tcgccgtcaa cgtggcgcaa caccaatacc
     7081 tggtccggat aaatcaggtc gggattgtgg atttgatccc ggttcgcgtc ccacaggcgg
     7141 ccccattgcc acgggctgta caggtatttg cccgaaatgc cccacagggt gtcgccctgt
     7201 ttgaccgtgt agcgttccgg cgcgttcggg cgcacctcca aatttgccgc caaagtttgt
     7261 gttgagaatg ccatacctgc cgcgcagagc agggttataa tacgacgttg cataaccgtt
     7321 ccccttatct gataaatttc ggtttgtctt gcttgattgg gttggaaaaa gcggcggcag
     7381 cccctcggga tgtgccgcgt gataaaaaat gttccgcatt ttaacatcga attatccgca
     7441 ccatcacggt aattatgaaa aacaggcggc gtatccgccg aaggaaagag aaaattatgg
     7501 ctttattgaa tatcttgcaa tatcccgacg agcgtctgca cacggtggca aagcctgtcg
     7561 aacaagtcga cgagcgcatc cggaagctga ttgccgatat gtttgaaacg atgtacgaat
     7621 cgcgcggcat cgggctggcg gcgacgcagg tcgatgtgca cgagcgcgtg gtcgtgatgg
     7681 atttgaccga agaccgcagc gaaccgcgcg tgttcatcaa ccccgtcatc gttgaaaaag
     7741 acggcgaaac cacttacgaa gagggctgcc tgtccgtgcc gggcatttac gacaccgtaa
     7801 cccgcgccga acgcgtcaag gtcgaggctt tgaacgaaaa aggcgaaaag ttcacgctgg
     7861 aggcggacgg cttgctggcg atttgcgtgc agcacgagtt ggaccacctg atgggtatcg
     7921 tgtttgtcga acgcctttcc caactcaagc aggggcggat taagaccaag ctgaaaaaac
     7981 gtcagaaaca tacgatttga cccttttgcc gtgccgtctg aacgctgcaa agttttcaga
     8041 cggcacggtc ttgtccgaca attttacgca cacgcaggaa cacgctatga aagtcatctt
     8101 cgccggcacg cccgattttg ccgccgccgc cttaagagcc gttgccgccg ccggttttga
     8161 aatcccgctg gtgctgaccc agcccgaccg tccgaaaggg cgcggtatgc aactgactgc
     8221 cccgcccgtc aaacaagccg cgctggaact cggtttgcgc gtcgaacagc ccgaaaaact
     8281 gcgtaacaac gccgaagccc tgcaaatgct caaagaggtc gaggcagacg taatggtggt
     8341 tgccgcctac ggtttgattc tgccgcaaga cgtgttggat gtgccgaaac acggctgcct
     8401 caacatccac gcttcgctgc tgccccgttg gcgcggcgcg gcgccgattc agcgcgcgat
     8461 tgaggccggc gatgccgaaa ccggcgtgtg cattatgcag atggatgccg gtttggacac
     8521 cggtgatgtg gtcagcgaac accgctacgc catccaaccg accgataccg ccaacgaagt
     8581 ccacgacgcg ctgatggaaa tcggtgcggc ggcggttgtt gccgatttgc aacagcttca
     8641 aagcaaaggc cgtctgaacg cggtcaaaca gcccgaagaa ggtgttactt acgcgcaaaa
     8701 attgcgcaaa gaagaggcgc gtatcgattg gagcgaaagc gcggcggtta tcgaacgcaa
     8761 aatccgcgct ttcaaccccg tgcctgccgc gtgggttgag tatcagggca agccgatgaa
     8821 aatccggcgg gcggaagtgg tggcgcaaca aggcgcggca ggcgaagtgt tgtcctgttc
     8881 ggcggacggt ttggtcgttg cctgcggcga aaacgcgctg aagattaccg aattgcagcc
     8941 tgccggcggc aggcgtatga atatcgcggc gtttgcagca ggacggcata tcgaagcagg
     9001 gacgaagctg taaatccctt cagacggcat tccgatccgc aaacgggaat gccgcctgaa
     9061 accatcagtt gaagaaagcg aatcacataa tatgagtatg gcacttgccc aaaaacttgc
     9121 cgccgacagc attgcggcgg ttgccgaagg acgcaacctt caggacgtgt tggcgcaaat
     9181 ccgcaccgcg catcccgacc ttacggcaca ggaaaacggc gcgttgcagg acatcgccta
     9241 cggctgccag cgttatttgg gcagtttgaa acatatgctc gcgcagatgc tgaaaaagcc
     9301 gattgacaac ccgcagctcg aaagcctgct tttggcggcg ttgtaccaac tgcattacac
     9361 gcgcaacgcg ccgcacgccg tggtcaacga agcggtggaa agcatagcca aaatcggacg
     9421 cgggcagtac cgttcgtttg ccaacgcgat tttgcgccgc tttttgcgcg aacgcgacaa
     9481 gcttgcggct tcctgtaaaa aagacgatgt ggcgaaacac aacctgccgc tgtggtgggt
     9541 ggcttacctg aaaaaccatt atccgaaaca ctggcacaac atcaccgccg cgctacaatc
     9601 ccatccgccg atgacgttgc gcgtcaaccg ccgacacggc aatgccgaaa gctatttgga
     9661 aaaactggct gcggaaggta ttccggccag ggcgttggac gaatatgcgg ttacgttgga
     9721 agaagccgtg ccggtaaacc gtctgcccgg tttttcagac ggcattgttt cggtacagga
     9781 cttcggtgcg cagcaggcgg cgtatcttct taacccgaaa gacggcgaac ggattttgga
     9841 cgcgtgcgcc gcgccgggcg gcaagacggg gcatatcttg gaactggcgg attgccgcgt
     9901 taccgccttg gacatcgatg caggccgtct gaagcgtgtg gaggacaata tcgcccgttt
     9961 gggctttcag acggcatcgg cggcgtgtgc cgatgcgcgg gatttggcgg cgtggtatga
    10021 tggaaagcct ttcgacgcaa tccttgccga cgtgccatgc accgcttccg gcgtggcgcg
    10081 gcgcaatccc gacgtgaaat ggctgcgccg tccgaccgac gcgctcaaaa ccgcccgcca
    10141 gcaggaagcc ctgctggacg cactttggca gacgctgaaa cagggcggca gaatgctgct
    10201 tgccacctgt tccgtgttcg tcgaagaaaa cgacgggcaa ttgcaaaaat tcctcaaccg
    10261 ccatgccgat gccgaaccga tcgaatcgcg ggtgctttta ccgaacaaac accaagatgg
    10321 cttttattac gcgcttattc aaaagcatta aacaatggct tgtgctgctg ccgatgcttt
    10381 ccgttttgcc ggacgcggcg gcggagggga tagatgtgag ccgcgccgaa gcgaggataa
    10441 ccgacggcgg gcagctttcc atcagcagcc gcttccaaac cgagctgccc gaccagctcc
    10501 aacaggcgtt gcgccggggc gtgccgctca actttacctt aagctggcag ctttccgccc
    10561 cgataatcgc ttcttatcgg tttaaattgg ggcaactgat tggcgatgac gacaatattg
    10621 actacaaact gagtttccat ccgctgacca accgctaccg cgttaccgtc ggcgcgtttt
    10681 cgacagacta cgacaccttg gatgcggcat tgcgcgcgac cggcgcggtt gccaactgga
    10741 aagtcctgaa caaaggcgcg ctgtccggtg cggaagcagg ggaaaccaag gcggaaatcc
    10801 gcctgacgct gtccacttca aaactgccca agccatttca aatcaatgca ttgacttctc
    10861 aaaactggca tttggattcg ggttggaaac ctctaaacat catcgggaac aaataatgcg
    10921 ccgttttcta ccgatcgcag ccatatgcgc cgtcgtcctg ttgtacggac tgacggcggc
    10981 aaccggcagc accagttcgc tggcggatta tttctggtgg atagttgcgt tcagcgcaat
    11041 gctgctgctg gtgttgtccg ccgttttggc acgttatgtc atattgctgt tgaaagacag
    11101 gcgcgacggc gtattcggtt cgcagattgc caaacgcctt tctgggatgt ttacgctggt
    11161 tgccgtactg cccggcgtgt ttctgttcgg cgtttccgca cagttcatca acggtacgat
    11221 taattcgtgg ttcggcaacg atacccacga ggcgcttgaa cgcagcctca atttgagcaa
    11281 gtccgcattg aatctggcgg cagacaacgc ccttggcaac gccatccccg tgcagataga
    11341 cctcatcagc accgcctccc tatccggcaa tatgggcagg gtgctggaac attatgccaa
    11401 cgggtttaca cagttgtccc tttacaatgc cgcaagcggc aaaatcgaaa aaagcatcaa
    11461 cccgcacaag ctcgatcagc cgtttccgga taaggcgcgt tgggaaaaaa tccaacaggc
    11521 gggttcggtc agggatttgg aaagcatagg cggcgtattg tacgcgcagg gctggctgtc
    11581 ggcgggtacg cacaacgggc gcgattacgc cttgtttttc cgtcagccgg ttcccaaagg
    11641 cgtggcagag gatgccgtct taatcgaaaa ggcaagggcg aaatatgctg agttgagtta
    11701 cagcaaaaaa ggtttgcaga cctttttcct ggcaaccctg ctgattgcct cgctgctgtc
    11761 gatttttctt gcactggtca tggcactgta tttcgcccgc cgtttcgtcg aacccgtcct
    11821 atcgcttgcc gagggggcga aggcggtggc gcaaggcgat ttcagccaaa cccgtcctgt
    11881 tttacgcaat gacgagttcg ggcgtttgac caagttgttc aaccacatga ccgagcagct
    11941 ttccatcgcc aaagaagcag acgagcgcaa ccgccggcgc gaggaagccg ccagacatta
    12001 tcttgaatgc gtgttggagg ggctgaccac gggcgtggtg gtgtttgacg aacaaggctg
    12061 tctgaaaacc ttcaacaaag cggcggaaca gattttgggg atgccgctta cccccctgtg
    12121 gggcagcagc cggcacggtt ggcacggcgt ttcggcgcag cagtccctgc ttgccgaagt
    12181 gtttgccgcc atcggcgcag cggcaggtac ggacaaaccg gtccatgtga aatatgccgc
    12241 gccggacgat gccaaaatcc tgctgggcaa ggcaaccgtc ctgcccgaag acaacggcaa
    12301 cggcgtggta atggtgattg acgacatcac cgttttgata cacgcgcaaa aagaagccgc
    12361 gtggggcgaa gtggcaaaac ggctggcaca cgaaatccgc aatccgctca cgcccatcca
    12421 gctttccgcc gaacgtctgg cgtggaaatt gggcgggaag ctggatgagc aggatgcaca
    12481 aatcctgacg cgttcgaccg acaccatcgt caaacaggtg gcggcattga aggaaatggt
    12541 cgaagcattc cgcaattatg cgcgttcccc ttcgctcaaa ttggaaaatc aggatttgaa
    12601 cgccttaatc ggcgatgtgt tggcattgta tgaagccggt ccgtgccggt ttgcggcgga
    12661 gcttgccggc gaaccgctga tggtggcggc ggatacgacc gccatgcggc aggtgctgca
    12721 caatattttc aaaaatgccg ccgaagcggc ggaagaagcc gatgtacccg aagtcagggt
    12781 aaaatcggaa gcggggcagg acggtcggat tgtcctgacg gtttgcgaca acggcaaagg
    12841 gttcggcagg gaaatgctgc acaacgcctt cgagccgtat gtaacggaca aaccggcggg
    12901 aacgggattg ggtctgcccg tggtgaaaaa aatcattgaa gaacacggcg gccgcatcag
    12961 cctgagcaat caggatgcgg gcggcgcgtg tgtcagaatc atcttgccaa aaacggtaga
    13021 aacttatgcg tagcagcgat attttaattg tagacgacga aatcggcatc cgcgacctgc
    13081 tgtcggaaat cctgcaggac gaaggttatt cggtcgcatt ggcggaaaac gccgaagagg
    13141 cgcgcaagct gcgccatcag gcgcgtccgg cgatggtgct gctggatatt tggatgcccg
    13201 attgcgacgg catcaccctt ttgaaggagt gggcgaaaaa cgggcagctc aatatgccgg
    13261 tggtgatgat gagcgggcac gccagcatcg ataccgccgt ggaagccacc aaaatcggcg
    13321 cgatcgattt tttggaaaaa ccgatttccc tgcaaaagct gctgtctgcc gtcgaaaacg
    13381 cgttgaagta cggtgcggcg caaaccgaaa cggggcctgt attcgacaag ctgggcaaca
    13441 gtgcggcgat tcaggaaatg aaccgtgagg taggggctgc ggtgaaacgt gcctctcccg
    13501 tacttttgac gggcgaggca ggttcgccgt ttgaaacggt ggcacgctat ttccataaaa
    13561 acggtacgcc gtgggtcagc ccggcaaggg tcgaatatct gatcgatatg ccgatggaac
    13621 tgttgcagaa ggcggagggc ggcgttttgt atgtcggcga catcgcccag tacagccgca
    13681 acatccaagc cggtattgcc tttattgtcg gcaaggcgga acaccgccgc gtcagggtgg
    13741 tcgcatcggg cagcagggcg gcaggttcag acggcattgc ctgcgaggaa aagctggcgg
    13801 aactgctgtc ggagtcggtc gtccgcattc cgccgctgcg tatgcagcat gaagatattc
    13861 ccttcctgat acaggggatt gcctgcaatg tggcggaaag tcaaaagatt gcgcccgccg
    13921 cattcagtga agaggcactt gccgcattga cccgttacga ctggccggga aatttcgacc
    13981 aactgcaaag cgtcgttgca acgctgttgt tggaggcgga cggacaggaa atcggcgcgg
    14041 cggcggtttc ttcccttttg gggcagaatg tgcctgccga gggagcggaa gatatggtgg
    14101 gcgggtttaa tttcaacctg cccctgcgcg aattgaggga ggaggtggag cggcgttatt
    14161 tcgagtacca catcgcccaa gaaggtcaga atatgagcaa agtggcgcag aaggtcggtt
    14221 tggaacgcac acacctttac cgcaaactca aacagctcgg catcggcgtt tcgcgccggg
    14281 cgggggaaaa aaccgaagaa taggcccgga cggtcggttt tccggctgcg ggcttttgtt
    14341 ttcagacggc atttggtgca aatgccgtct gaaatcgtaa ggggacggat tttatgacag
    14401 aggacgaacg tttcgcgtgg ttgcaactgg cttttacgcc ctatatcggt gcggaaagtt
    14461 tcttgctgct gatgcgccgt ttcggcagcg cgcaaaatgc cttgtccgca ccggcggaac
    14521 aggtcgcccc ggcggtgcgg cacaagcagg cggccgaggc ttggcgcaat gcggaaaaac
    14581 gcgctttggc gcggcaggcg gcagaagcgg cgttggaatg ggaaatgcgg gacggatgcc
    14641 gcctgatgct gcttcaggat gaagatttcc ccgaaatgct gacgcagggg ctgaccgcgc
    14701 cgccggtttt gtttttgcgc ggcaacgtgc ggctgctgca caagccttcc gccgccatcg
    14761 tcggcagccg ccatgccacg ccgcaggcga tgcggattgc caaagatttc ggcaagtcgt
    14821 tgggcgggca aaatatcccc gttgtgtcgg gtatggcttc cggtatcgat actgccgccc
    14881 atcagggcgc actggaggca gaaggcggca ccatcgccgt gtgggggacg ggtatagacc
    14941 gcatttaccc gccgtccaat aaaaaccttg cctatgaaat cgccgaaaaa ggattgattg
    15001 tcagcgagtt tcccatcggt acgcgcccgt atgccggcaa ctttccgcgc cgcaaccgcc
    15061 tgattgccgc gctgtcgcag gttacgctgg tggttgaagc tgcgttggaa tccggttcgc
    15121 tgattaccgc cggcttggcg gcagaaatgg ggcgcgaagt gatggcagta cccggttcga
    15181 tagacaatcc gcacagcaaa ggctgccaca aactgattaa agacggcgcg aaattggtgg
    15241 aatgcctgga cgacatcctg aacgaatgcc cggggctatt gcaaaatacg ggtgcttcat
    15301 catattctat aaataaggat acgcccgaca cgggacgccg cgccgttcag acggcatacg
    15361 ccccgccgcc tgccgcaaaa atgccgtctg aagcggcggc aggcggcaca gccgtcggcg
    15421 gcatactgga taaaatgggt ttcgacccca tccatcccga cgtgcttgcc ggacagttgg
    15481 ctatgcctgc cgcagatttg tatgccgcac tgttggaatt ggaattggac ggcagcgttg
    15541 ccgcaatgcc cggcggcaga taccagcgta tccgaacttg aacgcacttt atattaagga
    15601 acacgaatga ccgaagtcat cgcctacctc atcgaacatt tccaagattt cgatacctgt
    15661 ccgccgcccg aagacttggg tatgctgctt gaagaagcgg gtttcgatac gatggaaatc
    15721 ggcaacaccc tgatgatgat ggaagtattg ctcaacagct ccgaattttc cgccgaacct
    15781 gccgacagcg gcgcattgcg cgtgtacagc aaagaagaaa ccgacaacct gccgcaggaa
    15841 gtgatggggc tgatgcagta tctgattgaa gaaaaagccg tcagctgcga acagcgggaa
    15901 atcatcatcc acgcgctgat gcacatcccc ggcgacgaaa ttaccgtaga taccgccaaa
    15961 gtgctgaccc tgctgctttt atgggcaaac aagagcgagc tgcccgtgtt ggtcggcgac
    16021 gagctgatga gcgcgctttt actcgacaac aaacccacga tgaactgaag cggcttcaga
    16081 cggcccgccc gaggccgtct gaaacgccgg catcaaaacc accatccaga gaacgacaaa
    16141 tggcgaaaaa cctattaatc gtcgaatccc cgtccaaagc caaaaccctg aaaaaatatt
    16201 tgggcggcga ttttgaaatc cttgcatcct acggacacgt ccgcgacctc gtccccaaaa
    16261 gcggcgcggt cgatcccgac aacggctttg cgatgaaata ccaactcatc agccgcaacg
    16321 gcaaacacgt cgatgccatt gtcgccggtg ccaaagaagc tgaaaacatc tacctcgcca
    16381 ccgacccgga tagggaaggc gaagccattt cctggcatct tttggaaatc ctcaaatcca
    16441 aacgcggctt gaaaaacatc aagccgcagc gtgtcgtgtt ccacgaaatc accaaaaacg
    16501 ccgtgctcga tgccgttgcc catccgcgcg aaatcgaaat ggacttggtc gatgcgcaac
    16561 aagcccgccg tgctttggac tatttggtcg gctttaacct ttcgccattg ttatggaaaa
    16621 aaatccgccg cggtttgagc gcgggtcgtg tgcaaagtcc cgctttgcgc ctgatttgcg
    16681 aacgcgaaaa cgaaatccgc gcgtttgaag cgcaggaata ttggacggta catctagaca
    16741 gccacaaagg ccgcagcaag ttcaccgcca aactcgccca atacaacggc gcgaaactcg
    16801 aacaattcga cctgccgaac gaagccgctc aagccgatgt gttgaaagaa ctcgaaggca
    16861 aagaggccgt cgttaccgcc atcgaaaaga aaaagcgcag ccgcaatcct gccgcgccgt
    16921 tcaccacttc taccatgcag caggatgccg tgcgcaaact cggcttcacc accgaccgca
    16981 ccatgcgtac cgcccaacag ctttatgaag gtatagacgt agggcagggc gcgatcggtc
    17041 tgattaccta tatgcgtact gacagcgtga atttggcgga tgaagcgtta accgaaatcc
    17101 gccattacat cgaaaacaaa atcggcaaag aatatctgcc gagtgccgcc aaacaataca
    17161 aaaccaaatc caaaaacgcc caagaagcgc acgaagccat ccgtccgact tccgtgtacc
    17221 gcacgcccga aagcgtcaaa cccttcctga gcgcagacca gttcaaactc tatcaaatga
    17281 tttggcagcg taccgtcgcc tgtcagatga cgcctgccaa attcgaccaa accaccgtcg
    17341 atattaccgt cggcaaaggc gtattccgcg taaccggaca agtgcaaacc ttcgcaggct
    17401 tcttgagcgt ttatgaagaa agcagcgacg atgaagaagg cgaagacagc aaaaaactgc
    17461 ccgaaatgag cgaaggcgat aaattgcccg tggacaaact ctacggcgaa caacacttta
    17521 ccactccgcc gccgcgctac aacgaagcca cgctggttaa agccctcgaa gaatacggca
    17581 tcggccgccc ctcgacctac gccagcatca tctccacgct caaagaccgc gaatacgtta
    17641 cccttgagca aaaacgcttc atgcccaccg acacaggcga catcgtcaac aaattcctga
    17701 ccgaacactt cgcccaatac gtcgattacc acttcaccgc caaactcgaa gaccagcttg
    17761 acgaaattgc cgacggcaaa cgccaatgga ttcccttgat ggacaaattc tggaaaccgt
    17821 tcatcaagca agtggaagaa aaagaaggca tcgaacgcgc caaatttacc acgcaggaac
    17881 ttgatgaaac ctgcccgaaa tgcggcgaac acaaactgca aatcaaattc ggcaaaatgg
    17941 gtcgttttgt tgcgtgtgcc ggttatcccg agtgcagcta cacgcgcaac gtcaacgaaa
    18001 ctgccgaaga agccgccgag cgcatcgcca aagccgaagc cgaacaggcc gaactcgacg
    18061 gacgcgagtg cccgaaatgt ggcggtcgcc tagtgtacaa atacagccgc accggcagca
    18121 aattcatcgg ctgcgccaac taccccaaat gcaaacacgt cgagccgctg gaaaaaccga
    18181 aagataccgg cgtccagtgt ccgcaatgca aaaaaggcaa cctcgtcgag cgcaaatccc
    18241 gctacggcaa actgttttac agttgcagca cctatcccga ctgcaactac gccacttgga
    18301 acccgcccgt tgccgaaagc tgtccaaaat gcgcatggcc ggttttgacc atcaaaacca
    18361 ccaaacgctg gggtgtggaa aaagtttgtc cgcaaaaaga atgcggctgg aaagaacaga
    18421 ttgaaccgcc tgcaccgaaa gagtgagatt aggttggttt gaaagagaaa aggtcgtctg
    18481 aaaaattttc agacgacctt tgcttttctg tgattggttt attggaatcc gcgtgttgtt
    18541 ttaaagtccg ataaaatccg gttcatttca ggcgcaaaca aggcgatgta atcgtaagat
    18601 agaccgcgac tggcactggg atggggaaag cagacgactt cgcaatcttc aaacgattgg
    18661 aatttgacat tgaaacgtgt accgtcaaat tctttttgca ccgtctccag cggtttggtc
    18721 tgcttaccga ccaactgctc gaagcgtggc agtacatttt ggttgttcag aaaatccgcc
    18781 aacctgctgc ccatgaagag gatgactttc ggacgcagtt tttcgatgtg gtagagaaaa
    18841 ttatcgatgt gctcgggttg tgtgaacttg tcgggattgt cgatagtgtt gccctgtgta
    18901 gcagcccagt tggtttgaac cagggatttt tcaaatgcac cgcccaatcc attttcgtct
    18961 aaggggtgtc cccacatttc aaaccaattt tttatcgtat tatcgtaacg ccactttttt
    19021 gcctgctctc cgaaatagag ggatttgttt gcaaatgtat ggtcgatttt gttttcaggg
    19081 agtttgtatt cacctgctac ataagcagcc tcatcggctt tactccaacc ccattcatag
    19141 ccacaaatca ttaagccatg tttgtcgttg tagcctttga acaggctgtt gctcaaattc
    19201 aaatccttca tcatgaactc ttccttttaa aatttaagag cgattgactt caatgttttt
    19261 agatggggtg gaaaaatcct tgtgtaggca acataaattc aataaatttc ttgataattc
    19321 gaaacctact aatagcgcac ctataaaagc tttttcatta cgttcagcat gacggtcacg
    19381 tcgttcatat tttttacgct tgctgttccc tgttattaca gctaagccaa gtgatatggc
    19441 gagaattgcc caaacaatag tacttaaata acaattttcc ccatactatc aataaggaaa
    19501 gaaaaaacct tttagtatta ggtcgataga ttataatcca tgcccatgaa aatgcaataa
    19561 gagttataca taagatacaa gctgacagga tttctttatt tttaattaaa taacttagag
    19621 cgatgaggat gacaggtgtc aagaaaataa tagttacatc ccgatagcta taaaagaaaa
    19681 ctgccctatt ttgaatgtgg agatgtgcac agaatccaat atagctaagg ataatagtta
    19741 atataataaa aaaagaccac caagggtgaa gagataggaa ttccatgttt tccctttttt
    19801 tgtaaaaagg aaaaaatctt atctaatagt taattgccta accagccaga agaagtttaa
    19861 aatctatccc aataattcaa ccatctatac agaaagttca gcttatggaa acccacgaaa
    19921 aaatccgcct gatgcgcgaa ttgaataaat ggtcccagga ggatatggcg gaaaagctgg
    19981 cgatgtcggc aggagggtat gccaaaatcg aacggggcga aacgcagttg aatatcccgc
    20041 gtttggagca gttggctcag attttcaaaa tcgatatgtg ggacttgctc aaatcgggcg
    20101 gtggtgggat ggtgtttcag attaatgaag gtgatagtgg tggcgatatt gcgttgtatg
    20161 cgtcgggtga tgtttcgatg aaaatagaat ttttaaaaat ggagttgaaa cactgcaaag
    20221 aaatgttgga acaaaaagac aaagaaatcg agctgctccg caagctgacc gaaaccgttt
    20281 aaacagatat gccgtctgaa aaaagttttc agacggcata ttctttgaca ggtcttgtat
    20341 aataccgttt gaacttacag gtttttgatt atggcggcag gcaaacatac caaacacagc
    20401 aaccgggtac gcattatcgg cgggcaatgc cggggcagga aattgagttt cacatccgcc
    20461 gacggactgc gtccgacacc cgacagcgtg cgtgaaaagc tgtttaactg gctgggacag
    20521 gatttgacgg gtaaaacggt tttggatctc ttcggaggca gcggcgcact cggtatagaa
    20581 gccgcttcgc gcaacgccaa acgcgtgctg atttcggata acaaccgcca aaccgtgcag
    20641 accttgcaga aaaacagtcg cgaactgggt ttggggcagg tgcaaatcgt cttttcagac
    20701 ggcatcgcat atttgaagac cgtatccgaa cagtttgatg ttgtctttct cgacccgccg
    20761 tttgcatggc aggactggca aatcctgttt gatgccttga agccgtgcct gaacccccgg
    20821 gcattcgtct atctcgaggc gggtacgctg ccgaatattc ccgattggct gacggaatat
    20881 agagaaggga aatcggggca gagtacattt gaattaaggg ttttccaagt ggctgaataa
    20941 tatgcgcttt gataatcatt tccgagttgt aaacattcgt ttgcaaccgt ccggttcaaa
    21001 aaaaccttgt gctataatcc gcgcccgccc ggttttgata atttagtgga aaaggaaaag
    21061 aaatgtcgct ttttattacc gacgagtgca tcaactgcga cgtatgcgaa cccgaatgcc
    21121 ccaatgatgc catttcccaa ggcgaggaaa tttacgaaat caaccccaac ctctgcacgc
    21181 agtgcgtcgg acactacgat gagccgcagt gccagcaggt ttgcccggtg gactgcatcc
    21241 tgattgacga agaacatccc gaaacccatg acgagttgat ggcgaaatac gaaaagatta
    21301 tccagtttaa ataaattctt tttaaaacat caaattatgt ctgttttgaa ataaaatcaa
    21361 aaaaaaactt gacggaaaag caagccgcta ataaactaac gttctctttt ggagggattc
    21421 ccgagcggtc aaagggggca gactgtaaat ctgttgcgaa agcttcgaag gttcgaatcc
    21481 ttctccctcc accaaaattc ttacttgggg cagtagcgag taatgcgggt gtagctcaat
    21541 ggtagagcag aagccttcca agcttacggt gagggttcga ttcccttcac ccgctccaaa
    21601 caattaggcc catgtagctc aggggtagag cactcccttg gtaagggaga ggccggcagt
    21661 tcaaatctgc ccatgggcac catctctcga ttattcattt ctttaaggct tagatatata
    21721 ggatattg
//
LOCUS       DAWEYF010000015        21723 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.015, whole genome shotgun sequence.
ACCESSION   DAWEYF010000015 DAWEYF010000000
VERSION     DAWEYF010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21723
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.015"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(84..1970)
                     /gene="uvrC"
                     /locus_tag="WGN93_000409"
     CDS             complement(84..1970)
                     /gene="uvrC"
                     /locus_tag="WGN93_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ0226361.1"
                     /translation="MPSEAVFQIIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENNLI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPMPDALKEALESEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGIAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     EHLH"
     gene            complement(2025..4202)
                     /locus_tag="WGN93_000410"
     CDS             complement(2025..4202)
                     /locus_tag="WGN93_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ0226362.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVKSAGVNFASEEAQ
                     VTFDDSKTSAADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLAINIPFLIG
                     MVGMMLKGLNWTRHDWMLSPLLQFALASVVQLWLAVPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSPHAAYGMAHVYFEVGIMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRDGEWRQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGIGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGSPQVAAVYCVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLDIPAAQNAQTVVGAGITAEVEGVGLVKA
                     GKAEFAELALPKFLDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNI
                     DVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALSVSRATLRNIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            4341..5291
                     /gene="trxB"
                     /locus_tag="WGN93_000411"
     CDS             4341..5291
                     /gene="trxB"
                     /locus_tag="WGN93_000411"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ0226363.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            5447..5815
                     /gene="rpsF"
                     /locus_tag="WGN93_000412"
     CDS             5447..5815
                     /gene="rpsF"
                     /locus_tag="WGN93_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ0226364.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            5816..6118
                     /gene="priB"
                     /locus_tag="WGN93_000413"
     CDS             5816..6118
                     /gene="priB"
                     /locus_tag="WGN93_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ0226365.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHKSWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            6125..6355
                     /locus_tag="WGN93_000414"
     CDS             6125..6355
                     /locus_tag="WGN93_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ0226366.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            6372..6824
                     /locus_tag="WGN93_000415"
     CDS             6372..6824
                     /locus_tag="WGN93_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ0226367.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            6838..6945
                     /locus_tag="WGN93_000416"
     CDS             6838..6945
                     /locus_tag="WGN93_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HEZ0226368.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKIGMVVFIVD"
     gene            7530..7685
                     /locus_tag="WGN93_000417"
     CDS             7530..7685
                     /locus_tag="WGN93_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226369.1"
                     /translation="MYTGHYGGNTVWEAAASRGIGTAGDAPMPSGVKAGQSAVWKKAM
                     ESVGRRS"
     gene            complement(7801..8607)
                     /locus_tag="WGN93_000418"
     CDS             complement(7801..8607)
                     /locus_tag="WGN93_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ0226370.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(8608..9354)
                     /gene="pssA"
                     /locus_tag="WGN93_000419"
     CDS             complement(8608..9354)
                     /gene="pssA"
                     /locus_tag="WGN93_000419"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ0226371.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            9937..10419
                     /locus_tag="WGN93_000420"
     CDS             9937..10419
                     /locus_tag="WGN93_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ0226372.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(10471..11682)
                     /locus_tag="WGN93_000421"
     CDS             complement(10471..11682)
                     /locus_tag="WGN93_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ0226373.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQINWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIV
                     LNSLLPDPKES"
     gene            11905..14343
                     /locus_tag="WGN93_000422"
     CDS             11905..14343
                     /locus_tag="WGN93_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ0226374.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNSKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPSPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDSPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            14552..15862
                     /locus_tag="WGN93_000423"
     CDS             14552..15862
                     /locus_tag="WGN93_000423"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ0226375.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALLKAVELKVPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQVPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            15958..16572
                     /gene="clpP"
                     /locus_tag="WGN93_000424"
     CDS             15958..16572
                     /gene="clpP"
                     /locus_tag="WGN93_000424"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ0226376.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQL"
     gene            complement(16626..17891)
                     /gene="ispG"
                     /locus_tag="WGN93_000425"
                     /gene_synonym="gcpE"
     CDS             complement(16626..17891)
                     /gene="ispG"
                     /locus_tag="WGN93_000425"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ0226377.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIASEFL
                     AIVEEYVKTNYGENSSKRNKGKVIPIQSL"
     gene            complement(17907..18668)
                     /gene="pilW"
                     /locus_tag="WGN93_000426"
     CDS             complement(17907..18668)
                     /gene="pilW"
                     /locus_tag="WGN93_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ0226378.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(18671..19765)
                     /gene="rlmN"
                     /locus_tag="WGN93_000427"
     CDS             complement(18671..19765)
                     /gene="rlmN"
                     /locus_tag="WGN93_000427"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ0226379.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMIPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(19909..20334)
                     /gene="ndk"
                     /locus_tag="WGN93_000428"
     CDS             complement(19909..20334)
                     /gene="ndk"
                     /locus_tag="WGN93_000428"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ0226380.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(20393..21544)
                     /locus_tag="WGN93_000429"
     CDS             complement(20393..21544)
                     /locus_tag="WGN93_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ0226381.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKDSGG"
BASE COUNT         5200 a         5369 c         5905 g         5249 t
ORIGIN      
        1 ggtttaaatt taatccacta tatatcggta taccgacctg ctgtatcata ttttttacag
       61 acggtttttg cttgggcagc atactaatgc agatgctcgt aaatggtttc cgccaatgcc
      121 ttgctgatgc cttccacttt ttccaagtcc tcgcggctgg cggcaatcac gccgcgcaga
      181 ccgccgaagc gggtgagcag ggcttggcgg cgtttgctgc ctacgccggg gatgtcgctt
      241 aaggaggagg taacgcgggc tttgtcgcgt tttttgcggt ggccggtaat ggcgaaacgg
      301 tgcgattcat cgcgtacggt ttgcaataga tgcaaggccg ggctgttggg cggcaggcgg
      361 aagacttcgc cggtaaaagg cagtatgagt tcttccatac cggctttgcg ctccgggcct
      421 ttggcgatac cgaccaaagg aatgtgcagc ccgagttctt cccataccga tacggcgatg
      481 ccgatttgcc ctttgccgcc gtcaattaac acggcatccg gccatttgac ggtctcgccg
      541 ttggcttcgg cttcctgcat tttgccgtaa cggcgcgtca acacttcgcg catggcggcg
      601 tagtcgtcgc cgggtttggc ggtcgtgatg ttgtagcggc ggtattgcga gggctggatg
      661 ttttgctcat cgtacacgac gcaggaggcg atggtggctt cgccttgggt gtggctgatg
      721 tcgaagcatt cgaggcggtt gaggccgtct gaatccatac cgaggatttt ggcgagttcg
      781 tcgatgcggt gttgctggct gctttgttgc aggcggcgtt gtgcaatcgc catttgtgcg
      841 ttttgctccg ccattttcaa ccaaactttg cgttcgccta tggtcttggt gacaaattgc
      901 atttgtttgc cgtgttcgct ctctagggct tctttcaatg cgtcgggcat ggggaagttg
      961 ctgatgatga tgtcaggttt gcttttgccc agatagtgtt gggcgacgaa ggcttcggca
     1021 tagtcttgcc catttggctc gggatcgttt ttggtgtcgg ggaagaaact tttgtctccg
     1081 acgtgccgcc caccgcgtat gctgacccag tgtacgcaga cgatgccgtc tgaaaccgcc
     1141 agcgcgagca aatcgatatc gttggggttg ttcgggtttt tgctgtcgat gaactggttg
     1201 ctctgcataa tgccgagtgc ttggatttgg tcgcggtagc gggcggcttc ttcaaattgc
     1261 agattagcgg cggcagtttg cattttgtgt tgcagggtgc gggtcagttc gtcggttttg
     1321 ccattgagaa aagtggcggc ttgacgcacg ctgtcgcggt agtcttcttc gctgatgtgt
     1381 ccgacgcagg gcgcggtgca gcgtttgatt tgatacagca ggcaagggcg gtcacgatgc
     1441 tcgaatacgc tgtcttcgca ggtacgcagc ataaagactt tttgcaacac ttgaatgctg
     1501 tcgcgcacgg cgttgctgtt gggatacggg ccgaagtatt ggtttggctt tttcagcgtg
     1561 ccgcggtaat acgccatctg cggatattga tggccgctga gcatcaaata aggatagctt
     1621 ttgtcgtcgc ggaaaaggat attgtatttc ggcgacaagg ctttgatgag gttgttttcg
     1681 agaatcaggg cttcggcttc ggaacgcgtg atggtggttt cgatatgatg aacctgtttt
     1741 accatcaatg cgatgcgcgg cgaatggtcg tttttttgga aatagccgga cacgcgccgc
     1801 ttgaggttga ccgctttgcc gacgtataag actttgccgc cttcgtcaaa aaaacggtac
     1861 acgcccggca gcttgggcag gtttttgagg aagagcggga tatcgaattg ttccggagaa
     1921 cggttttctg tattcatatc aattatttga aaaacggctt cagacggcat atcggcagcg
     1981 gcagccttat ccgttcggaa aagctgtcgg gtggttatat gcggtcaatc gatttttacc
     2041 cgtttcaggc gcaaggcgtt gctcaacacg gaaaccgagc ttgccgccat tgccgcgcct
     2101 gcgatgacag ggtttaaaaa accgagcgcg gcaagcggaa tgcccaaaat attgtagaag
     2161 aaggcgaaaa acaggttttg cttgatgttt ctcaacgtcg cccgcgatac cgatagggca
     2221 tcggcgagtt ggttgaccga atgttgcatc agcgtggcgg atgcggtgtg ttcggcaacg
     2281 tccgcgccgc ctttcatggc gaagctaacg ttggcggcgg cgagcgcagg tgcgtcgttg
     2341 atgccgtctc cgaccatcgc cacggttttg ccggcggctt tgagtttctg cacttcggcg
     2401 gctttgtcgc gcggactcat attaccgaag gcgtgtgcga tgcccagttg tttggcgacg
     2461 tattcgaccg tgccttggtt gtcgccgctc ataatataga catcgatatt gtgttttttc
     2521 agacggccta tggcttcggc ggtatcggct ttcaacgcgt cggcaagtgc gaatgcgccg
     2581 atgggtttgt tatcgactga gaccgcaaca atgcttgcaa tatcccaaac gccgtctaaa
     2641 aacttcggca aggccagttc ggcaaattcg gctttgcctg ctttcaccaa acccacgcct
     2701 tccacttcgg cggtaatgcc tgcgccgaca acggtttgtg cgttttgtgc ggcgggaatg
     2761 tccaaaccgc gcgcttgggc ggcggagacg atggcacggg cgagcggatg ggcggcgttt
     2821 tgttcgacgg cggcggcgat gcggtacaaa gcgtcttcgt caaagccgct gtcgggaacg
     2881 caataaacgg cggcaacctg cgggctgcct tcggtcagcg taccggtttt gtccaacacg
     2941 acggcatcga cgtgggcggc ttcctccatt gctgccgcgt ctttaaacca aataccgtgt
     3001 ttcaccgctt tgccaatgcc gaccataatc gcggcgggtg tagccagacc gagcgcacac
     3061 gggcaggcaa tcaccaaaac ggcgacggcg tgcatcagcg caaccgtcca atcgccctta
     3121 atcagccaag taacaataaa agtcaacaac gcgatgccca cgacggcagg cacgaacacc
     3181 gccgccgcct tgtccgccac gcgcgcaatc ggtgctttac tgccttgcgc ttcagagagt
     3241 gcgttcatca tgtcgccgag cagggtttgg ctgccgagct gcgcggcgcg gtacaccacg
     3301 ctgccttcag tcatcagcgc gcccgccaat actttgccgc ctgccttttt ctcttcggga
     3361 ttggattcgc cggtaagatg gctttcgtcc gcccagccgc tgccgctttc tatgatgccg
     3421 tcggcggcaa tgcgttcgcc gtgattggcg cggattaggt cgccgatttg cacttggtcg
     3481 atgggtagct gccgccattc gccatcgcgt tgcacgttga cttgggttgg cgtgagtttg
     3541 agcagcaagc ccaagctgtt caggctggat tttttggtgc ggtgttccaa aaatttaccc
     3601 agtgacacaa aaccaatcac cattatgcct acttcaaaat acacatgcgc cataccgtac
     3661 gccgcgtgcg ggctgaaaaa cagcatatag acggaataca ggtaaatcga gaccgtgccg
     3721 atggtaacga gtacgtccat attcgccagc ccgcctttaa tgctcgccca cgcgcttttg
     3781 taaaatggca ccgccagcca aagctgcacc acactcgcca atgcaaactg caacaagggc
     3841 gacaacatcc aatcatgccg tgtccaattc agccctttta gcatcatccc taccataccg
     3901 ataaggaacg ggatattgat ggccagcaaa agccacaacc tccagccgat atggtgttct
     3961 gcttcgggtt gcggcaatgt atcttccgtc ttttccttcg cgccgtaacc ggttttctca
     4021 atgattttgg caatgtcggc agcggaagtt ttgctgtcgt caaacgtaac ctgcgcctcc
     4081 tcgctggcga agttcactcc cgctgatttg acaaagtctt ttttgttcaa cactttttca
     4141 atgcgcgaag cacatgcctg acaggtcatg ccttcgattt ggaaacggat tttttgttgc
     4201 ataagcgtga ttcctgcttt gatattcaga cggcagttaa ggctgcggga tgccgtctga
     4261 gcgccggtat ggtcgaaatt tctcaaacgc gccgataatt cgagtagaat ccgaaaactt
     4321 gacacagcaa aggaaaaaca atgtcccaac accgcaaact gattattttg ggttccggcc
     4381 ccgccggata caccgccgcc gtctatgccg cgcgtgccaa tttaaacccc gtcattatta
     4441 caggtatcgc gcaaggcggg caactgatga ccaccaccga agtggacaac tggcctgccg
     4501 atgccgacgg cgtgcaaggg ccggaattga tggcgcggtt tctcgcccac gccgaacgtt
     4561 tcggaacgga aatcattttt gaccaaatca acgccgtcga tctgcaaaaa cgcccgttta
     4621 cactcaaagg cgatatgggc gagtacactt gcgatgccct gattgtcgca acaggcgcgt
     4681 ccgccaaata cctcggtttg ccgagtgagg aagcgtttgc aggaaaaggc gtttccgctt
     4741 gtgccacctg cgacggtttc ttctacaaaa accaagatgt tgccgtagtt ggcggcggca
     4801 atacggcagt tgaagaggca ctctaccttg ccaatatcgc caaaaccgtt accctgatcc
     4861 accgccgcag cgagttccgt gccgaaaaaa tcatgatcga caaactgatg aaacgcgtgg
     4921 aagagggcaa aatcatcctc aagctggaaa gcaacctgca agaagtactg ggcgacgatc
     4981 ggggcgtaaa cggcgcatta ttaaaaaaca acgacggttc tgagcaacaa attgccgtca
     5041 gcggcatttt tatcgccatc gggcacaagc cgaataccga tattttcaaa ggtcagttgg
     5101 aaatggacga agccggttac ctgaaaacca aaggcggcac ggcggacaat gtcggcgcaa
     5161 ccaatatcga aggcgtatgg gcggcgggcg acgtaaaaga ccatacctac cgtcaggcga
     5221 ttaccagcgc ggcttccggc tgtcaggcgg ctttggacgc ggaacgctgg ctgggcagcc
     5281 aaaacatttg aatgccgtct gaaaccgaaa ttttcggcgg aatgcaagtt tttcgcacca
     5341 aatccttgat tccgtcggca aaccccaata taatgcccgt tctttgaacc ttgccttctg
     5401 ctttcgcatg gcagaaggct gtttttacca tccataagga gataacatgc gtcattacga
     5461 gatcgtgttt atcgttcatc ctgatcaaag cgagcaagtg cccgctatgg ttgaacgtta
     5521 caaaaccatg attgctgaag caaacggtaa gattcaccgt ttggaagatt ggggtcgccg
     5581 ccaactggct tacccgatta acaaaatcca taaagcccat tacgttttga tgaacatcga
     5641 aaccactccc gaagtggttg aagagctgga aaccgcattc cgcttcaatg atgccgtatt
     5701 gcgccatcta accatcaaaa ccaaacacgc cgttaccgaa gcatccccta tgttgggtgg
     5761 tgaaaaggct aagaacctgt tgagcggtgc gtctgaagaa gcggtcgccc aataattggg
     5821 attcaataat cttgtttcgc ttgccgcgtt aattgaaaag gttttcccta ttcgatatac
     5881 gcctgccgga atccctgttt tagatattat tttaaagcac aaatcgtggc aggaggaaaa
     5941 cgggcagcaa tgccttgtcc aattggaaat tccggcacgg attttaggca ggcaggcgga
     6001 agagtggcag tatcggcaag gtgtatatgt tcacgtcgaa ggttttttag ctcaaaaaag
     6061 cagacgttcc cttatgccga tgctcaggat acaaaatatt caagaatata aaggttaaac
     6121 gacaatggct cgtcaatcat tcaaacgtag aaaattctgc cgtttcacgg ctgaaaaaat
     6181 ccaagaagtc gattacaaac aagttgattt gctgaaagac tttatctctg aaaacggtaa
     6241 aatcattcct gcacgcatca caggaacgaa ggcattctac caacgccaat tggctgttgc
     6301 cgtaaaacgc gcacgcttcc tggctctgct gccttacacc gaccaacaca aataattttg
     6361 gagattgaat catgcaaatt attctgttag aaaaaatcgg cggtctgggc aacttgggcg
     6421 acatcgtaac cgttaaaaac ggctacgccc gcaactttct aattcccgca ggtaaggcaa
     6481 aacgtgcgac cgaagcgaat atgaaagagt ttgaagcacg ccgtgccgaa ttggaagcca
     6541 aacaggctga aattttggca gatgcccgag tccgtcagga aaaattggac ggtcaaaccg
     6601 ttaccgttgc tcaaaaagcc ggtgtggacg gccgcctgtt cggttccgtt accaatgccg
     6661 acattgctgc tgcaatcgtt gctgccggca tcgaagccgt gaaagcaaat gtacgtctgc
     6721 cgaacggtcc tctgaaagcc gttggcgagt acgaagtgga agtggctttg cacactgatg
     6781 ccgttgctaa aattaccgtt gccgtcgttg ccgcaaccga gtaattgaaa ttatcagatg
     6841 ccgtctgaaa ccctgccgat tgtcggaatg tggtttcaga cggtatttgt tttgttttcc
     6901 gtatattctg caaaaatcgg gatggttgtt tttatagtgg attaaattta aaccagtaca
     6961 gcgttgcctc gccttgcctt gccttgcctt gccgtgctat ctgtattgtc tgcggcttcg
     7021 tcgccttgtc ctgatttttg ttaatccact atatttgcct gtggtctttg caggaatagt
     7081 ttgttaacga aatttgatgc ataaaatgcg ccaaaaaata ttggctgtgt tttaatatag
     7141 tgttgataag cgtacctggc ttcaatatac tcaataggat agatctcttc ctaaccgaaa
     7201 aaataattgt cttttccctt gcaaataatt gaaatcaaca gattactaaa acacagccaa
     7261 aatattcaat tgacaaaaac ttttctgatt ttgagaaatc tgtgaaaatc aggggattat
     7321 ttattttgaa aatggtatcg ggcataaaat ttggctgtgt ttcaatatgg tgctgataac
     7381 atactttgtt tcaaaatgtt caataggata acttcctgat tgaccgaaaa ataatggcct
     7441 tttcccttgc aagcagttga aatcaacaga ttgtcaaaat acatcctaaa aatttaataa
     7501 cttatatata tgattgcaaa ggttgcggct tgtataccgg tcattatggc ggaaataccg
     7561 tttgggaggc agccgcatcg cgtggaatcg gcacggcagg cgatgcgccg atgccttcgg
     7621 gcgtgaaggc ggggcaatcg gcagtttgga aaaaggcaat ggaatctgtg ggcagaagaa
     7681 gttaagggta aaagtcgggc gcacggtcag gttgtctgtc cttttgtcgg aacaggagac
     7741 tgggcagctt tgtcctgatt aattgcttgt gcaaacggta aaaaggtttt ttcgtgtgtt
     7801 ttaaagcagg ttgtacagca tttttccggc aatcaaaagc aacataatgc cgaaggattt
     7861 tttgagtttg gcagaagaaa gtttgtgggc ggttttgaca ccgagcgggg caaaggcaat
     7921 ggttgccgcg ctgaggacgg cgacggcggg caggtaaagg aagcccagtg acccttcggg
     7981 caatcctgca atattcaggc cgttgagcag atacgatatt gcgccggaga gtgcaatcgg
     8041 ccaggcaagg ccggatgatg tgccgatggc tttatgggcg gggaagccgc agtggattaa
     8101 gaaggggacg gaaagtgaac cgccgcctat gccgacccag ctcgacattg cgccgaacag
     8161 tgtggaaacc gcagtcagtc cgggcagtcc gggcagcggg cgggatgccg tctgagggtc
     8221 ggtatgcagt gttttgaatg cgacggcggt taaaaacagg atgaagaaaa tttgaagccc
     8281 gaacgcgggg atatattttg cggagagtgc gcccgtgaat acgccgaata tcatacccgg
     8341 catcatcgca aatacggttt tccagtcgac cgcctgtttt ttgtgctgcc ccaacatact
     8401 ggaaaaggcg gtgaagacca tgacggcgaa ggatgtgccg acggcgaggt gttgcgcgta
     8461 aggatgttgt gccaaaccct gcaaatcaag tacccataaa acgacaggga caatcagcgt
     8521 gccgccgcct acgccgaaca gaccggcaat aaaacctgcc gcactgccta cggcaagcag
     8581 gattaagata atgtcccaat gccacattta atccgccttt ctgtattttt tccagaatcg
     8641 gcgtgccgcc ataatgtagc cggacaggct gtatccgaga aagaacagga agaggacgag
     8701 cgacggttcc caagtgacca gaagcagcaa taagacggca agcagcattc cgacaaaggg
     8761 gacttgtctg cggatgttga tttctttaaa actccaaaaa gggatttgga caatcatcga
     8821 caggccggca aacagtgtga tgcccaatgc ccaccagtgg acggcgggga atttttcgac
     8881 gctgtggttg acccaaatca gcccgacaat cagcgcggcg gcagtcggac tgggcacgcc
     8941 gataaaccag cgtttgtcca ccttgccgat gagcgtgttg aacagcgcaa ggcgcagggc
     9001 ggcgcaggcg cagtagatga aggcgacgga ataaccgatt ttgccgaact gccaaagctg
     9061 ccatttgtag gcaatcagag cgggagcaac gccgaagctg accatatcgg caaggctgtc
     9121 gagctgctcc ccgaacgcgc tttggctgtt ggtcagccgc gccacgcgcc cgtccatacc
     9181 gtccagcaac atagagatga ataccgcgat ggcggcggtt tcataacgtc cgtgcatgga
     9241 ttgggtgatt gcgtaaaatg cggaaaacag cgcggcgatg gtaaaggagt tgggcagcag
     9301 gtagatactg ttttgacgca gggagcgttg cggggtgttg gtcggggttt ccatagctga
     9361 agtgtctcac ggacgtggag aatcgatagg ggattataac ccaaaccatt atcgaacaat
     9421 acgcccttta ggatgaagcc ctcggaggcg gtttgttttt ctgatggcgg atgctttgcg
     9481 gggcggtttg actctgcctg ccaccgggtg tgttgtttcg gatttttgcc ggatggatat
     9541 tgttgccggg catttctggg cttgccggaa ggtatcgggg ggagggcatc ggaatatgcg
     9601 gcgcaccgtt caaaccgggg cggcgtttcc ctattttcag ggggttgcag gtttcaacaa
     9661 attgaaagat attttttgca tttccgaccg tatgctgatt ttgaagcggg ataaattata
     9721 ggacaaggtt tttcgcccgc cgcaaaggtt ggccgcaatg ccgtctgaaa acaacggctt
     9781 gccgctaagg cggcggtatg cggatttgcg ctgccgaaat cggtttgcca tacccggcgg
     9841 tgcaatctgc ggggagggat aagccgataa ggcgggactt atcctgtttt ttgtttataa
     9901 tgcaacagaa tttggacgaa ccgtcgggaa tttatcatga tgaaaaagat actggccgta
     9961 tcggcactat gcctgatgac tgcggcggca cgggctgccg atacttacgg ctatctcgcc
    10021 gtttggcaga atccgcagaa tgcggacgat gttttgcagg ttaaaactac aaaagaagat
    10081 tcgacgaaaa gcgaagcgtt tgccgagttg gaagcctttt gcaaaggtca ggacacgctt
    10141 gcgggcattg ccgaagacga gccgaccgga tgccggtcgg tcgtgtcgct gaacaatacc
    10201 tgtgtcgcgc tggcataccc gaaagccttg ggcgcgatgc gcgttgaaaa cgccgttgtg
    10261 attacttctc cgcgttttac gagcgttcat caggtcgcac tcaaccagtg catcaaaaaa
    10321 tacggcgcac agggacaatg cggcttggaa acagtgtatt gcacgtcttc ttcttattac
    10381 ggcggaactg tgcgctcttt gattcaaaat ctcaaataaa acggaaaatg ccgtctgaaa
    10441 gatgttcaga cggcatttcc atatcgacgg tcaggattct ttcggatcgg gcagcaggct
    10501 gttcaacaca atggcaagta cggcgcacaa gcccacgccg gcaaagctga agctgcccaa
    10561 tttgagcgtc atgccgccga tgcccgtggt cagtaccgag ctgacgatga ccaggttttt
    10621 cggcagcatc aaatcgactt tggcatcaat cagcgttttc acgcccaaag aagcaatcgt
    10681 gccgaacagc agcagcataa tgccacccat cacgggcatc ggaatggaag ccaaaaacgc
    10741 attgaatttg ccgaaaaacg ccatgcagac ggcaaaaacc gccgcccaag tcatgatgac
    10801 agggttactg tttttggtaa tcatcaccgc acccgttact tcgccgtagg tcgtaaccgg
    10861 cgggccgccg atcagaccgg caacgcacac gcccaaaccg tcgcccgcaa gggttttgtc
    10921 caagcccggg tctttcgtat agtctttccc cgtcacattg ccgattgcca tgatgccgcc
    10981 gatgtgttcg atggcggggg cgacggcaac gggcagcata aacagtgcag cctgccagtt
    11041 gatctgaggc gtttcaaaat ggggaacggc gaaccagggc gcgtgtgcaa tgcttgccgt
    11101 gtccaccagt cccatcagca gtgccaaaac ataacccgaa gcgacaccga tcaagatggg
    11161 aatcagcttc atcatcctgc tgccgaaaac cgatacgatg gcggtaacgg caaaggtaaa
    11221 gccggaaaga atcagcgaat cggtatagtc gatgacctgt ttgccgtccg cctgacccat
    11281 tgccatgctg cttgccgcca cggcaacaga cagaccgatg accatgatga cggggccgat
    11341 gacgaccgga ggcagcagtt tgtgtaccgc tgccagtccg cgccaacgga tcagcgcggc
    11401 aaacacaaaa tacataaagc cggcggcaaa cagtccgaac atggtggaag gcagccccca
    11461 ttcgccgacg gagtagataa tcggtgcgat aaaggcaaac gaagaaccaa gaaaaatcgg
    11521 cactttgcgt ttggttgtga tttggaacag cagcgttccc aagcctgcgc ccaaaagcgc
    11581 aagagccgga ttcagaccgg tcagcagggg aaccagcacc attgcgccga atgccacaaa
    11641 taaaatctgc gcgccggaaa cggcaagttt cagttggttc ataccatctt ctttcaatcg
    11701 gttcaaacgg cacggattat actggtttgc cgagggtctg cgtaaaaata catatggcgg
    11761 gcaacagata tgccgtctga aaggcaatgt ctgtctgttg caggatgaaa gcaggagaaa
    11821 tggagtataa tccgacactt tccatattca atccgcaagc cgtccggctt ccttatttca
    11881 gacggcattt tccggtaata cggcatgaca gaaaaatccc ataaaaaaac agcaaaaggc
    11941 agggcgggaa gcccgtcccc aacgtccgca cgcaacaaga aagccgacaa cggcgcacgg
    12001 ggcaataaag tttccgagcg gctcaaagcg gtcaaagagt tgcagaaaac cgaaaccaaa
    12061 aaggcgcgtc ccgaacatgt cgtcaacctt atcggcgacg cactgtggct gatgggtttg
    12121 gcggcaacct tgtatttggc gatttccctg atcagtttcg atatgggcga tccgtcttgg
    12181 tcgcacagtt cgccggttgt ggaagatgtc gccaattggg gcggactgtt cggcgcgtat
    12241 gttgccgatg tcggctatta tcttttcggc tggtcgttct ggtggtggat agcggctgcc
    12301 tgcgtcatgc tgtataaaaa ttttcgtctg cacgcaaaac agacggaaaa cgaggcatac
    12361 aaccacaaaa tcgctgccgc cgcgctgttt gtcctgacgg tcttcagccc cgtcttggag
    12421 tattttgtgc tgggcggaaa atatgccgac tccctgcctg tcggagcagg cggtatggtc
    12481 ggcatacgcg tcggcgcagt gtttgcgtgg ctgctgggga aatcgggcag cctgctgatt
    12541 atcttggttg ttctgctgtt gtcgttgtcc ctgctggtgc agatttcatg gctggaattt
    12601 ttgaacggtg cgggcagggc ggttcaaaac cgcctgagtg ccttatccgg caaggtcatg
    12661 gctttaggaa aacgccggcc gaatagcaaa acagacggtg tcgataccca aaatacacgg
    12721 cgcatggtaa aagaagccaa gaatattacg gccaaacccg ttgccttgcc cgaaggcagc
    12781 agcagcaacc gcaaatccgt cgcggtttcc gtcgcgccgt cgcccaaaat tcaggtttct
    12841 ctgtttgaag atgacgaacc tcggcaggcg ggcgaatacc acaagcctac attgaaccta
    12901 ttgcggattc ctgacagcga acccgtcagc atcaatcccg ccgaattgga gcgcactgcc
    12961 gaactgatcg aatccaaact ggcagaattc ggcatcggcg tacaagtcgt atccgccaca
    13021 tccggtcccg tcatcacgcg ctacgaaatc gaacccgcgc aaggtgttaa aggcagccaa
    13081 attgttgcct tgtcgaaaga tttggcacgc tctatgtcgc tgcaatccgt gcgtatcgtc
    13141 gaaaccatcg caggtaaaaa cacgatgggc atcgagttgc ccaacgacaa acgccaagac
    13201 gtgatgttga gcgaaatctt gtcctcgccc gtgtttgccg aagccaaatc caagctgacc
    13261 gtcgcgctgg gcaaagacat tgccggtacc cccgttgtcg gcgacttggc gaaaatgccg
    13321 caccttttgg tcgccggtat gactggttcg ggcaagtccg tcggcgtgaa cggcatgatt
    13381 atgtctatgc ttttcaaagc tacgcccgac gaagtccgct ttatcatgat agacccgaaa
    13441 atgcttgagt tgagcattta cgacggcatt ccgcacctgc tctgtcccgt cgtgaccgat
    13501 atgcgcgaag cggggcaggc gttgaactgg tgcgtcgccg aaatggaaaa acgctaccgc
    13561 ctgctttccc acgccggtgt acgcaatctg gaaggcttca accaaaaagt cgaagccgca
    13621 aaagcggcag gcaagccgct gctcaatccg ttcagtctga accccgacag ccccgagcct
    13681 ttggaaaaac tgccgatgat tgtggtcgtt atcgacgaac ttgccgacct gatgatgacc
    13741 gaacgcaaag ccgtcgagca gcaaatcgcc cgtctcgccc aaaaagcgcg cgccgccggt
    13801 atccatatga ttgtcgccac ccaacgtccc agtgtcgatg tcgttactgg cctgattaaa
    13861 gccaacatcc cgacgcgtat ggcgtttacc gtgcaaagca aaatcgacag ccgtaccatc
    13921 ctcgaccaaa tgggcgcgga cgaactgctc aaatatggcg attcgctgtt cctccagccc
    13981 ggcagtgccg aaccgacccg cctgcaaggc gcgtttgttt cagacgacga agtacatcaa
    14041 gtcgtcaact acgtcaaatc gcaagcccca gccgactata ttgaaggtct gctcagcggc
    14101 gaggccgcgc tggaaactgc caatatcgtt aatccgaatg cagacagcga cgaattgttc
    14161 gatcaggcag tcgcctatgt tttggaaagc aaaaaaacct ccatttcgtc tttgcagcgg
    14221 cagttgcgta tcggctataa ccgcgcggca aacctgatgg aggcactgga aaatgcgggt
    14281 gtcgtttctc ccaccgacct caacggcagc cgtaaaattt tggcgcacaa ggaccatttg
    14341 tagcccgtat tgcaaaatgc cgtctgaacg gcggaattgg cgtttcagac ggcatattat
    14401 gtttcaggcg gaacattgtg atatacttgc cagctaaaat ctcccctttg cggcaatgcg
    14461 gttcaaatat ccgtaccgtt gcgctgtttg cttccccatg cagggaagaa ggtttaccat
    14521 tttatcaaca caacaaattt aagggcttat gatgagcgta actgttgaaa ctttagaaaa
    14581 tctggaacgc aaagtagtgt tgtccctgcc ttggtccgaa atcaacgcag aaaccgataa
    14641 aaaactgaaa caaacccagc gccgtgcaaa aatcgacggt ttccgcccgg gtaaagcacc
    14701 tttaaaaatg attgcccaaa tgtacggtgc gagcgcgcaa aacgacgtga tcaacgagct
    14761 ggtgcaacgc cgcttccacg atgttgccgt tgcccaagag ttgaaagtgg caggcttccc
    14821 ccgttttgaa ggcgttgaag aacaagacga taaagaatct ttcaaagttg ccgccatttt
    14881 tgaagtgttc cccgaagtcg ttatcggcga tttgtctgca caagaagttg aaaaagtaac
    14941 cgcttccgtc ggtgatgccg aagtggacca aaccgtagaa atcctgcgca aacaacgcac
    15001 ccgcttcaac catgtcgaac gcgaagcccg aaacggcgac cgcgtcatca ttgactttga
    15061 aggcaaaatc gacggcgaac cttttgccgg cggcgcatcc aaaaactacg ccttcgtatt
    15121 gggcgcaagt caaatgctgc ctgaatttga agccggcgta gtcggcatga aggctggcga
    15181 aagtaaagac gttaccgtca acttccctga agaataccac ggcaaagacg ttgccggtaa
    15241 aactgccgtg ttcaccatta cgctgaacaa cgtttccgaa gcgactctgc ctgaagtcga
    15301 tgcagatttt gcaaaagcct tgggtattgc ggatggcgat gttgccaaaa tgcgtgaaga
    15361 agtgaagaaa aacgtaagcc gcgaagtgga acgccgcgtg aacgaacaaa ccaaagaatc
    15421 cgtaatgaac gcgctgctca aagccgtaga gttgaaagtt ccggttgctt tggtcaatga
    15481 agaagccgcc cgtttggcaa acgagatgaa acaaaacttc gtcaaccaag gcatggccga
    15541 tgccgcgaac ttggatttgc ctttggatat gttcaaagaa caagccgaac gccgcgtgtc
    15601 tttgggtctg attttggcca aactggttga tgaaaacaaa ctggaaccga ctgaggagca
    15661 aatcaaagcc gttgtcgcca acttcgcaga aagctacgaa gatcctcaag aagtaatcga
    15721 ctggtactac gcagagcctt cccgcctgca agtcccgact tctttggcga tagaaagcaa
    15781 cgtcgttgat ttcgttttgg gtaaagccaa agtaaacgaa aaagctttgt cttttgacga
    15841 agtgatgggc gcgcaagcct gattatcctg aaaatgccgt cttagggcag tttttgaaag
    15901 caccgaagcc gcttttaaag cccgctttgg tgcttttaca tcatgaaagg agacgaaatg
    15961 tcttttgata actatcttgt ccctaccgtt atcgagcaga gcggtcgcgg tgagcgtgca
    16021 ttcgatatct attcccggct tttgaaagag cgcatcgtat tcttggtcgg cccggtaacc
    16081 gacgagtccg ccaatctggt ggttgcccaa ctgttgtttt tggaaagtga gaatccggat
    16141 aaggatattt tcttctatat taactcgccg ggcggttcgg taacggctgg tatgtcgatt
    16201 tacgacacca tgaatttcat caagcccgat gtatcgactt tgtgcttggg gcaggcagca
    16261 agtatgggcg cgttcttatt gtcagcaggc gaaaaaggca aacgtttcgc cctgcccaac
    16321 agccggatta tgattcacca gcctttaatc agcggtggtt tgggtggtca ggcatccgat
    16381 attgaaattc acgcacgcga actgttgaaa atcaaagaaa aacttaaccg cctgatggcg
    16441 aaacattgcg gccgcgattt ggcagatttg gagcgcgaca ccgaccgtga taatttcatg
    16501 tccgccgaag aggctaaaga atatggtctg attgatcaaa tcttggagaa ccgcgcttct
    16561 ttgcagcttt aataagaaac ctgagagaga caaatgccgt ctgaacattt cagacggcat
    16621 ttattttata gagactgtat cgggatgact tttcctttat tgcgtttaga actgttttcg
    16681 ccataattgg ttttaacata ttcctctaca atagctagga attcgcttgc aatattatca
    16741 cctttcagtg ttattttgcg ctccccatct acataaaccg gcgcgacggg tgtttccccc
    16801 gtaccgggca ggctgatgcc gatgtcggcc aatttgcttt ctccgggccc attgacaacg
    16861 cagcccatta cggcaacgtt cagggattca accccgggat aaagggtacg ccatatagac
    16921 attttttggc gcaggtaatt ttgaacatct tgtgccagct cttgaaatac ggtactggtg
    16981 gtacgcccgc agccggggca ggcggtaacc atcggcgtaa acgaacgcaa tcccatagtc
    17041 tgtaaaatct cttgcccgac gacgacctcc tgagtacgcg ggctgccagg ttccggagtc
    17101 agtgaaatgc ggatggtgtc gccgattcct tcttgaagca agacggataa tgccgccgtt
    17161 gatgcgacaa tgcctttgct gcccataccg gcttcggtca aacccaaatg cagcggatag
    17221 gcgcaacggc tgcccagttc gcggtaaacc tgaatcaaat cctgaaccgc gctgactttg
    17281 cacgacagga tgattttgtc ttcgggcagt cccaatagaa cggctttttc ggcagattcc
    17341 aaagcggaga caatcagtgc ttccttcgtc acttcttcgg gcggtttcgg cgcggaagaa
    17401 gcgaggttgg catccatcat acgtttggcg aggctttgat ccaaagaacc ccagtttacg
    17461 ccgatgcgga cggctttatc gttttcagca gcagtccgaa tcataaaggc aaatttttca
    17521 tcgcctttta cgcctttgcc gacattgccg ggattgatgc ggtatttgga caatgctttg
    17581 ccgcattctg gaaattccgc caacaggcgt tcgccgttga agtggaaatc gccgataagc
    17641 ggtgtggcat agcccatatc gtccaagcgg cggcggattt cggcaacttt ggacgcggct
    17701 tcggggctgt tgacggtaat acgcaccatt tcggatccgg catcgctcaa ttccttaatc
    17761 tgcaatgcgg tggcttttgc atcggcagtg tcggtgttgg tcatagattg gataacgacg
    17821 ggtgcttctg aaccgacggt aatatgatcg atgcggactt gatgcgtctt gcggcgttgg
    17881 agtgtgttca tatggtttga atctgtttat tgaccggtga ggacggtttg caattcttcc
    17941 gagtagggga aattcgcctg caattgtgct tcatattcgt atgccgcctg tgcgttgccg
    18001 agggctttgg caattttcca gcctagcagc aaatcatcgg cctgaaggac ttctaccctg
    18061 ctttggtatt ttttaaagta gtaatcggca tcgcccaact gcccggccag cattttggtg
    18121 cgcgccagtt ctttaaatgc gggtgggaac tgcggctggg cggcgaggga acgtttcaaa
    18181 taggcttccg ccaatccgaa ttgcccctgt tttgcgctgc atatgccttt attcaggttg
    18241 gcaatataag gggtcgggta ggtggggtcg gccagggctt tgtcgaaata tgccatagat
    18301 tcggcagggc ggttgagcct gccgcacagg aaccagccgt agttgttgtt gatttcggca
    18361 ctgtcgggtt tgatggagag ggcttgccgg aaactttcct gcgccttgtc gttaactttc
    18421 aggtattgat agatttcggc acggaccagc caggcaagct cgtttttagg gtctgatttc
    18481 aaggcgtctt caatacttgc cgtcgcctga cggtagtcct gaccgcgcat atattccatt
    18541 gccaactggg ttttgatatt ggaaacctga ttggcttttt ctgcccgcga ggggcggtag
    18601 gaagtgctgc acgcgcccaa ggcaaggaca agtaataaag agattcgttt ggatggctta
    18661 aaaggcataa ttacccctgt tgtccgatta aaatctgctg ccatttttgt tggcggcgcg
    18721 ttttatcctg aacctgcccc gccaactgtc cgcaggcggc atcgatgtcg tcgccgcgcg
    18781 tttttcgtac ggtaacgaca aatcctgcct gctgcaaaat atcgcggaac acacggatgt
    18841 tctcattgct ggagcgttcg tatccggagt ttgggaaggg attgaacgga atcagattga
    18901 acttgcaggg aacatctgtg accagttcga tcagttcgcg cgcatgttgc gccttatcgt
    18961 ttattccgtc caacatgacg tattcgaaag tgatgaaatc cctgggtgct ttgaccagat
    19021 agcgttggca tgcggccatc aattctttca agggatattt tttgttcaac ggtacgattt
    19081 ggttgcggac ttcgtcattg gaagcgtgga gggaaaccgc caaagccacc ggcatgacat
    19141 cgcgcaacct gtccatttgg ggaatcatac ccgaagtgga aacggttacg cggcggcggc
    19201 tcaaaccgta gccgtggtcg tccagcatga tgcttaaggc ggtaacgaca ttgtcgaagt
    19261 tcgccatcgg ctcgcccatg cccatcatga cgacgttgga aatcacgcgc tcgtttttcg
    19321 gtgtaacgcc catcgctttg tttgcccacc acaattgccc gatgatttcg gcagcagtca
    19381 aattgcggtt gaagccctgc cggccggtcg aacaaaatgt acattccaaa gcgcagccga
    19441 cttgtgagga aatgcagagc gtgccgcgat ccgattcggg gatgaagacg gtttccaccc
    19501 cgttgcccgt accgacatcc aaaagccatt ttcgagtgcc gtctgaagat ttttgagaca
    19561 tcatcagctt gggaatttcg atgcctgcct gttcgttcag tttatggcgc aacgattttg
    19621 ccaaatcggt catttcgtta aaattttgcg cgccggattg gtgcatccaa cgcataacct
    19681 gtttggcacg gaaaggtttt tcgcccatat cggcaaaatg tcgggtcagc ccttgaaggt
    19741 cgtagttgag cagattggtt ttcatgtgtt tgtgtttttc ttaaatcaag gcttcaaata
    19801 aaaaattgca gggcaggcaa gtttgatttg aagccttttg caacagagtt ttcagacggc
    19861 atggatatat tttatgccgt ctgaagagga gttgtgcggt gtattgtatc aacgggggca
    19921 gatttcggtt tggctgaaaa agtaggcaat ttccaaagcg gcattttccg gagtgtccga
    19981 gccgtgtacg gcattgatgc tgaccgaagt ggcaaagtcc gcgcgtatcg tgccttcggc
    20041 ggcttcggcg ggattggtcg cccccatcag ttcgcggttt ttcagaacgg cgttttcgcc
    20101 ttccagtact tgaatcataa ccggaccgcc ggtcataaat tcaaccaatc cggcgtagaa
    20161 ggggcggtct ttatgaaccg cataaaattc ttgcgcctct ttgagggtaa gctgcttcat
    20221 tttggcggca acgattttca gaccgttctc ctcaaagcgg ctgtatattt tgccgatgac
    20281 gtttttgccg acggcatcgg gtttgatgat ggagatggta cgttcaatcg ccatgctata
    20341 tccttatttt tacttaagaa gaatcaaatc ggtattctat caaaaaaata acttatccgc
    20401 ctgaatcctt gggagatagg gtcaggtgcg gctgttccaa ataaacttcg gactgcattt
    20461 cgaccatccg gctggcggtg cgggtaaatt cttcggcaaa atcgccttcc gtatagatat
    20521 ggttgacatc taccgcgccg gtggcacaca gtttgacccg gaaatcgtag agtacgtcaa
    20581 tcagccaagt cagccgccgc gcctccgcct tttcttgcgg tgagagttgt tccaaacctg
    20641 aaataaaaac catttcataa tgttcggcca aatacagata gtcggactgt gagcgggggc
    20701 cgaagcacag tgcgcggaaa tcaaaccata tggcacggcc ggactcggct ttgtggggaa
    20761 tctcccgacc gtggatggtg ctgatgccgg ggttcaaatc ggtaatgcct gtcatttctt
    20821 tgaacagttt tgccagtttt gcctcatttt cttcattggc aggcgtaaag aaaatctcgg
    20881 cggggcggag ggtacgcagt cggtagtctt caccgccgtc aacgtttaag acggtcaggc
    20941 tggactcgat gagcgcgatt gtgggaagaa aactgctccg gttttgacct tgcgggtaga
    21001 gttcggaagg cgcgtagttt gaagtcgcca ccaaaacaac gccctcgtta agcaggtttt
    21061 ccagcagacg gcctaaaatc attgcatccg caatatcgct gacatgaaat tcgtcaaaac
    21121 ataatacgcg ggtttctttg gcaatctcgg cggcaacgga tttcaacggg ttgctttcgc
    21181 ttttcagggt tttcagcctc tggtggattt ctgccataaa ggcatgaaag tggacgcggc
    21241 gtttgcggcg gtaagggagg cagccgaaaa aagcgtccat cagaaagctt ttgccgcgtc
    21301 cgaccccgcc atagaaataa agccctttgg ggacttgcgg ggaacgcaaa ctcctgccta
    21361 aaaaacggtt tcttttgcgt ttgaacatca tcaattcggt ccaaagccga tcgaggtgtt
    21421 cgatggcggc tgcctgcgcg tcgtcgcgga tgaagttggg cagttgtgag gcagcctgat
    21481 accaggtcag cgggctgtgg ttttcaaacg gcggggcttt aaaaagttgg tctctattac
    21541 tcatatttaa ccttgttata cttcttgcgg cggagaaaga aaatgcttac cgtcggtatt
    21601 ataaatgatt tccttcaaac ttggcgtttt ccgtggaaaa gaataatgac gcgcacaagg
    21661 ggggtatgag caaaggcggc gtttcaatat ggtgcagata tgagctcaaa tgccttttat
    21721 agt
//
LOCUS       DAWEYF010000016        21633 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.016, whole genome shotgun sequence.
ACCESSION   DAWEYF010000016 DAWEYF010000000
VERSION     DAWEYF010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21633
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.016"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(45..1226)
                     /gene="odhB"
                     /locus_tag="WGN93_000430"
     CDS             complement(45..1226)
                     /gene="odhB"
                     /locus_tag="WGN93_000430"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ0226382.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            complement(1326..4154)
                     /locus_tag="WGN93_000431"
     CDS             complement(1326..4154)
                     /locus_tag="WGN93_000431"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ0226383.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDTVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVVGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDVLAL"
     gene            complement(4359..5642)
                     /gene="gltA"
                     /locus_tag="WGN93_000432"
     CDS             complement(4359..5642)
                     /gene="gltA"
                     /locus_tag="WGN93_000432"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ0226384.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5754..6002)
                     /locus_tag="WGN93_000433"
     CDS             complement(5754..6002)
                     /locus_tag="WGN93_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ0226385.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(6006..6713)
                     /locus_tag="WGN93_000434"
     CDS             complement(6006..6713)
                     /locus_tag="WGN93_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ0226386.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6834..8597)
                     /gene="sdhA"
                     /locus_tag="WGN93_000435"
     CDS             complement(6834..8597)
                     /gene="sdhA"
                     /locus_tag="WGN93_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ0226387.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8600..8941)
                     /gene="sdhD"
                     /locus_tag="WGN93_000436"
     CDS             complement(8600..8941)
                     /gene="sdhD"
                     /locus_tag="WGN93_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ0226388.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(8935..9312)
                     /gene="sdhC"
                     /locus_tag="WGN93_000437"
     CDS             complement(8935..9312)
                     /gene="sdhC"
                     /locus_tag="WGN93_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ0226389.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9591..10994)
                     /locus_tag="WGN93_000438"
     CDS             complement(9591..10994)
                     /locus_tag="WGN93_000438"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ0226390.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSNNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMRRVKSERDRFVGFVV
                     ADVEKWPADKRIMGSAKFIDEHTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEAKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11248..11985)
                     /locus_tag="WGN93_000439"
     CDS             complement(11248..11985)
                     /locus_tag="WGN93_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ0226391.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LQFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12264..14540)
                     /gene="metE"
                     /locus_tag="WGN93_000440"
     CDS             complement(12264..14540)
                     /gene="metE"
                     /locus_tag="WGN93_000440"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ0226392.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADYVAAGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHANTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEADAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLNKVSAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVESLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(14676..15554)
                     /gene="metF"
                     /locus_tag="WGN93_000441"
     CDS             complement(14676..15554)
                     /gene="metF"
                     /locus_tag="WGN93_000441"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ0226393.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15755..16030
                     /locus_tag="WGN93_000442"
     CDS             15755..16030
                     /locus_tag="WGN93_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ0226394.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16030..16155
                     /gene="ykgO"
                     /locus_tag="WGN93_000443"
     CDS             16030..16155
                     /gene="ykgO"
                     /locus_tag="WGN93_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ0226395.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(16263..16463)
                     /locus_tag="WGN93_000444"
     CDS             complement(16263..16463)
                     /locus_tag="WGN93_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226396.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRALRDVAKISAWVLLG
                     AAAATLFWYLVMLYFKHIPDSY"
     gene            16623..17762
                     /locus_tag="WGN93_000445"
     CDS             16623..17762
                     /locus_tag="WGN93_000445"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ0226397.1"
                     /translation="MSQNASVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYAGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALTDYLGIGQWAAVVGGSLGGMQA
                     LQWTISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRALQNVKAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            17759..18340
                     /gene="metW"
                     /locus_tag="WGN93_000446"
     CDS             17759..18340
                     /gene="metW"
                     /locus_tag="WGN93_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ0226398.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTNSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            18457..19302
                     /locus_tag="WGN93_000447"
     CDS             18457..19302
                     /locus_tag="WGN93_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ0226399.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(19352..19912)
                     /gene="efp"
                     /locus_tag="WGN93_000448"
     CDS             complement(19352..19912)
                     /gene="efp"
                     /locus_tag="WGN93_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ0226400.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(19955..21103)
                     /gene="earP"
                     /locus_tag="WGN93_000449"
     CDS             complement(19955..21103)
                     /gene="earP"
                     /locus_tag="WGN93_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ0226401.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWRVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDVVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCEA
                     VRFDSGVLRKRLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPLTLLLAGAQIIDS
                     LKQNGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRCLSDDLNGGGALSAT
                     QRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(21122..21400)
                     /locus_tag="WGN93_000450"
     CDS             complement(21122..21400)
                     /locus_tag="WGN93_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226402.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFVANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIVLLVVYLFHYFGAF"
BASE COUNT         5319 a         5493 c         5476 g         5345 t
ORIGIN      
        1 tcagacggcc ttttcattaa caaataaaag gccgtctgaa acgattacag atccaacaac
       61 aggcgggctg ggtcttccaa cgcgtcttta atggctacca aggtcaatac agcttcgcgg
      121 ccgtcaatga tacggtggtc gtaagacaga gccagataca tcattggacg gacaacaact
      181 tggccgtttt caaccacagc gcgctcttta gtggcgtgca tacccaaaat cgcagattga
      241 ggcggattga tgatcggggt ggacatcata gaaccgaaag taccgccgtt ggtaatactg
      301 aatgtaccgc cggtcagatc ttcgatagcg attttgccgt ctttggcttt tttcgcgtaa
      361 tcaacaattg cttgttcgat gtcggcaatg ctcatttggt cggcatcgcg caggattggc
      421 acaaccaaac cgcgtgggct gccaatcgcg ataccgatgt cgaagtagcc gtggtacaca
      481 atgtctttgc cgtcaacaga agcattcaca accgggtatt ttttcagggc tgcaacagcg
      541 gctttaacga agaaggacat aaagcccagt ttcacgccgt gttctttctc gaatttttct
      601 ttgtacttcg cacgcaagtc catgattggt ttcatgttga cttcgttgaa tgtagtcaga
      661 atggcgtttt cttgttgaga agccaagagg cgttctgcaa cacgggcacg caggcggctc
      721 atcggtacgc gttcttcagg acgtgcgccg gcaggaagtg caacggcagg agcagcggct
      781 gcggcaggtt tggctgcggc attttgtacg tcttctttca atacgcgacc gtcacggccg
      841 gaaccttgca atgcgttcac gtcaacaccg ctctctgcag ccagtttggc ggcggcaggc
      901 atagcggcgt tgttttgtgc agcagcagga gcggcggccg gggcagcttc ggcaggagcg
      961 gcggcaggtg cttcagcagc ggcagtagca gcggtatcga tacgtgccaa aacttggtcg
     1021 gcaacaacgg tttcaccgtc ttgcgctacg atttcaacca atacgccggc ttgtggagaa
     1081 ggtacttcca aaaccacttt gtccgtttcg atatcgatca ggatttcgtc acgggcaact
     1141 gcttcgccaa cttttttctt ccattccaag agcgtgcctt cagatacgct ttcagacagc
     1201 ataggtactt ttacatcaat aatcattttg tgtctccaat ggccctttca gacggcctgt
     1261 tgtgtgtttt tcattctgca tatgggcatt ccgcctgagc agcctcagac ggaatgctgc
     1321 ttggtttaca acgccaaaac gtcttcaacc aattgtttca attgagcaat gtgtttgctt
     1381 gagtagccca ctgcaggcga tgcgctgctt ggacgaccgg cataagacag tttttgctct
     1441 tcgctgataa cgtcttcgat gcggtggcgg atttggtaga acgcgccttg gtttttcggc
     1501 tcttcttgcg cccaaaccac agattttgcg ttcggatatt tcgccagttc ggctttaacc
     1561 tcatcgtatg ggaacggata cagctgctca acgcggacaa tcgcaacatc atcttccagt
     1621 ttacgttcgg ctcgaccggc ttccaagtca tagtaaacct gaccggcaca caataccacg
     1681 cgtttcacgc tgtcgttgct tgcgcgttcg gcggtatcgc cgacaaccgg acggaaagtc
     1741 gaaccttcgg tgaagttttc cagcgggctc attgcccctt tgaatcgcaa caggcgtttg
     1801 gacatgaaaa tcactagcgg tttgcggtat gaacctaaga cttgacgttg caagaggtgg
     1861 aacatttgcg acgcttcaga tggcatgatg acttgcatat tgttctcaga acacagttgc
     1921 aaccaacgtt ctacgcgtgc agaagagtgc tcagggcctt gaccgtcgta accgtgcggc
     1981 aggatggtgg tcagaccgca caagcgaccc catttggttt cgcctgaaga caggaattga
     2041 tcaatcgtca cttgcgcgcc gttggcgaaa tcgccgaatt gcgcttccca aatggtcagc
     2101 ttgtcaggtg cggagcaggc aaagccgtac tcgaacgcca tcacggcctc ttcgttcaaa
     2161 atggagtcga taaccaggaa ctcgcccatt ccttcgccca tatggcgcag aggaacataa
     2221 gtaccgtcgt cccatttttc gcgtttttga tcgtgcaata cggcgtggcg gtgcgagaac
     2281 gtaccgcggc cggagtcctc accggagata cgcacgccat gacctttggt tacgaggctg
     2341 gcgtatgcca aggtttcggc cataccccaa tctatggcct gtttgccgga tgccatggct
     2401 ttacgcgctt caatcacacg ttttgcagtc ggatgcaggg caaagccttc cggtacggcg
     2461 gtaaacttct cagtgagacg ctcaatatct gcggcaggca aaccggtttc gatgtgttcg
     2521 cgccaatctt tgccttggta tttgctccag tcgatttgcg tgcgttgaaa gttgctcaac
     2581 gttgtttgct cgacgtgttc gcctttgtcc aaagcatcac ggtaggcttg gatgtaaccg
     2641 tctgcctcgg cttgggttac cacgccttcg gcaatcagtt gctcggtgta caaagcacgc
     2701 gcaccggggt gttgcgatac ttttttgtac atcatcggtt gggtcaaggt cggatcatcg
     2761 ccctcgttgt gaccccattt acggtagcag acaacgtcaa tcacgatgtc tttatggaat
     2821 tttttgcggt aatccaaagc ggcttggatg gcaaagcaaa cacgctcagg atcatcgccg
     2881 ttcacatgga taaccggagc ggaaaccatt tttgcgatat cggtacagtg tacggttgaa
     2941 cgggtatcgc ggatatcgga agtggtaaag ccgatttgat tgttgatgac gatatgaacc
     3001 gtaccgccgg tggtataacc gcgcgtttta gacaggttga atgtcgcttg gttgacaccc
     3061 aaaccgataa atgcggagtc gccgtgaatc aatacgggca agactttatc gcggccgttt
     3121 tcgcccaaac gtttttgctt ggcgcgtgca gaaccttcca ctaccggatt gacgatttcc
     3181 aagtgtgacg ggttgaacgc caaagaaacg tgcatcggac catgtggagt ggcgatgtcg
     3241 gagctgaagc ccatgtggta tttcacgtcg ccgctaggca atttgatttc ggcacggcct
     3301 tcaaactcag cgaacaaatc tccgggtttt ttacccaaaa tgttcaccaa aacattcaga
     3361 cggccacggt gcgccatacc gatgatgact tcttccacgc cgtctttacc ggcgttttga
     3421 atcaggtagt tcaaaccggc aatcgcgctt tcgccgcctt cgacaccgaa acgtttctga
     3481 ccgacatatt tggtatgcag ataacgttcc aaagtctcgg cagcagtcat ctctttcaag
     3541 atacggcgtt tttgatcggc attgtaatgc ggtgtggaca atacgctttc aaaataattg
     3601 cgtacccagc ggcgctcttc ggtattggga atatagatat attccaatgc gatgtggccg
     3661 cagtaggttt gtttgaggtt gctgatgatt tgggacaaag gcagtttgcc gcgattggca
     3721 aaatcgccct cgcccatatt gaattgaagc gccatatcgg catcagacag accgtggaat
     3781 ttcggatcga gggcttcaat atcgcgcggg gggatacgtt tgagcggatc aagttgggct
     3841 gcacccacgc cttggatacg ataggcagaa atcagccgta aaacgctgac ttgctttttc
     3901 agcattgcct catccgcacc gcccgcaacg gcagatgcaa ttttcttttt cgccaaagta
     3961 acaaatgatt cgcgaatcgg tgtgtgtgcg acatcgacag caaccgtccc cggctgtttg
     4021 ctcaaatcgg tgaaatactg cttccatttt tcatcaaccg tatcggggtt ttccaaaaaa
     4081 gcctcgtaca attcctcaat gtagggtgcg ttcgaaccga acaggtaaga gaaattgagt
     4141 ttttcgtcca tcatggcgtg cgctcttttc tttaaaatat aaacaaaggg tagaagtccg
     4201 cgtcctgacg gctaaactga tgccgtctga aaagacattt tattctaccc tattttaaac
     4261 cggattgctt gtcttgattt catccgacta caatcagacg gattcgggaa acaatccggt
     4321 tctctgatat tgcctgtttg acaatatatt aatgtatgtt acctctcgcc tggcggcaca
     4381 taatcgcggc gttccgaacc ggtataaagc tggcgcgggc ggccgatttt cagcgaagga
     4441 tcgctaatca tctcgtgcca gtgcgaaatc cagcccacgc tgcgcgacag ggcgaagatg
     4501 acggtaaaca tttcggtcgg gatgcccagc gcggacagga cgatgccgga atagaaatcg
     4561 acgtttggat acagtttgcg ttcgataaag aacgggtctt tcagcgcaat ctgttccaat
     4621 tccatcgcca gtttgaattt cggactgtct tccaagccca attccttcaa aacttcatag
     4681 caggtttcgc gcataatgct ggcacgcgga tccatattgc ggtacacgcg gtgaccgaag
     4741 cccatcagac ggtatttgcg ttgtttcaca ccttccatgt atgcggcaac attagacaca
     4801 tcgccgattt cgtccaacat tttcaacacg gcttcgttcg caccgccgtg cgaagcaccc
     4861 cacaggcagg cgataccggc agcaatacag gcaaacggat tcgcacccga agagcctgcc
     4921 agacggacgg ttgaagttga ggcgttttgc tcgtggtcgg catgcaaaat aaagatgcgg
     4981 tcgagcgcgc gtgccaaaac gggattgggt ttgtagtctt cacacggcgt ggcgaacatc
     5041 atatgaagga agttttcgga ataagaaaga ttattcttcg gataattgaa cggcagaccg
     5101 tttgaatagc ggtagcacat tgccgcaatg gtcgggattt tagaaatcag gcggtaaatc
     5161 gcgattttgc ggtgttcggg attgctaatg tccaagctgt cttggtagaa cgcagacagt
     5221 gcgccgacca cgccgaccat catcgccatc ggatgcgcgt cgcggcggaa gccccggaag
     5281 aaccaagtca gctgttcatg caccatcgtg tggcggcgga cggtattgtc aaattctgcc
     5341 ttttgctcgg gagtcggcag ttcgccgtaa atcaacaggt agcagacttc caaataatcg
     5401 gacttttcgg ccagctgctc gatggggtat ccgcgataat aaagcaagcc ttgatcgccg
     5461 tcgatgtaag taattttaga ctcacagctt gcggttgaaa caaatccggg gtcgaaggaa
     5521 aacaaacctg tattttttgt cagcccccga atgtcaacca catcgtgccc gatgctggct
     5581 tccaataccg gcagctccaa acctgcctga cccggtacgt tgagtttgat tgatttggac
     5641 atattattgc tcctttgcaa gttataaccc acgttactgc atccgcagca cgttctttgc
     5701 cttcagacgg cttttgcatt ttgaaatctg cctgcaggca gatttcagat gcctcatgcc
     5761 cgtctgattt tttcaagcat cgggataagg tgccctttgt ccgtttccga atgcccgtta
     5821 atcaaggcaa gcaattcttg atcttgaaat tcaaggattt cggaaaactc ggacagctct
     5881 ttatcgctca aatgctcgaa ttctttttcc ataaacctgc cgaagattaa atctaactcc
     5941 aacaatcccc ggcgggtttg aaaacggatt ttccgtttgg caatatcgtc aaaaaccatc
     6001 atttcttaaa cggcccgttt caacataatc tctttaatct taccgatggc tcgggtcgga
     6061 ttcaagtgtt tgggacatac gtctacgcag ttcataatgg tgtggcaacg gaacaaacgg
     6121 tatgggtcgt tcagattatc caaacgctca ttagtgatgg tatctcggct gtccgcaatg
     6181 aagcggtaag cattcagcaa accggacgga ccaacgaatt tatcagggtt ccaccaaaat
     6241 gacgggcagg cagtcgaaca gcaggcgcac aaaatacact cgtacaaacc gtccaactct
     6301 ttacgctctt cctgagtttg cagacgctct ttgtccgcat caatcggatt atcgttgaca
     6361 acataaggtt tgacggaatg gtattgtttg aagaactggg tcatatccac aatcaggtca
     6421 cggataacag gcagacctgg cagaggacga attttaaccg gctgtttcaa gccacgcaga
     6481 tcggtcaaac acgccaagcc gtttttgccg ttgatgttca taccgtcaga accgcaaatg
     6541 ccttcgcggc aggagcggcg gaaagacaag gtatcgtctt gtgctttcag gcgtaccaaa
     6601 gcatccaaaa gtttcacgtc ggtcggttcc aattccaact cgtaacgctg catataaggc
     6661 ttggcatcaa catccgggtt gtaacggtaa atttcaaaac tcattttttc catgagaagt
     6721 gttccttttc tcatcaactg cccaatgatt ttgtattata aattcaagca gttcaatgtg
     6781 ggtatggtta gatttcagac gagcttatga ggcgaaaacc gtctgaaaac gcatcaataa
     6841 acgcgcttgg ccggtttgat gtattccacg ctcaaaggct tggtatgtac cggtttgtaa
     6901 gacaaagtat tggtatctga atggtacagc gtatgtttca tccagttttc atcatcgcgc
     6961 tcaggatggt cgtctgaagc gtgcgcaccg cgtgattctt tacgtgcttc ggcagacacc
     7021 aaagtcgctt tcgccacttc aattaggtta tccaattcca aagcctcgat acgcgcggta
     7081 ttccacactt tgctcttgtc tttgatttcg gtacgtttca cacgctcggc aatcgccatg
     7141 acttctcgaa cgcctttgct cagaatctca tcagtacgga acacgccggc gtgcagttgt
     7201 acggagcgtt gcaattcgcg acgcaatgca tcaacgtttt cgccatcagt ttgattgtcc
     7261 aaacgctcga tacgttggcg ggtcagctcg cccgcatccg caggcaaagg tttccagtcg
     7321 ctttgctctt tgatgaattt aatcatgctg tcgccggcag ctttaccgaa taccaccaag
     7381 tccaacaggg agttggtacc caagcggttc gcaccgtgta cggaagcaca agcgcactca
     7441 cctgccgcat acagaccttt tacaggcact tcgtattcgt cgccttgagg aacgacaact
     7501 tcgccatggt agttggtcgg aataccgccc atcatatagt gggtagtcgg cacaacggga
     7561 atcgggtctt taatcggatc gataccggcg aactgaatgg aaatctcgcg gatgcccggc
     7621 agtttttcca taattttttc tgcgccgata tggtcgattt tcagtaagac atggtctttg
     7681 tttttaccgc agccgcgacc ttcgtagatt tccatcgcca tcgcgcggga aacaacgtcg
     7741 cgagaagcca agtcttttac ggtcggcgca tagcgttcca taaagcgttc gccgtcggca
     7801 ttcaacagaa taccgccctc gccgcgtacg ccttcggtaa tcaacacgcc cgcacctgcc
     7861 acgccggtcg ggtggaattg ccagaattcc atgtcttcca acgggatacc tgcacgcgca
     7921 caaataccca aaccatcgcc ggtattcata taggcattgg tagaagacgc ataaatacgg
     7981 ccgccgccgc cggtagcaaa catcacagct ttagcgtgga aaatataaac ttcgccggtt
     8041 tccatttcca tggcggttac gccgacgaca tcgccgtttt catcacgaat caaatcttgt
     8101 gccgtccatt ccacaaagaa ttgcgtattg gcacggacat tttgttggta caaagtatgc
     8161 agcatcgcat gacctgtacg gtcggcaacc gcacaggcgc gttctaccgc gcgtttaccg
     8221 tgttcggcag tatggccgcc gaaaggacgc tgataaattt taccgctttc cacacggtca
     8281 aaaggcatac ccatgtgttc caactcaatt acggcttcag gcgcggcgcg gcacataaac
     8341 tcaatcgcat cttggtcgcc caaccagtcg gaacctttca cggtatcgta catgtgccag
     8401 tcccaacggt cttcctgcac attacccaga gaggcggaaa taccgccctg cgccgctacg
     8461 gtatgcgaac gggtcgggaa cactttagac aaaacggcac aattcagacc ggatttggat
     8521 aattggaggg ctgcgcgtaa acctgcacca ccaccgccga caatcacggc atcaaacttg
     8581 cgaacaggaa aacccatact tacccccaaa ttactttaat tgaatacacc aagcagccga
     8641 ccagccagac gatggtggca acctgcaaaa acaaacgcac gccgaagggt ttgatatagt
     8701 ccatccacaa atcgcggata cccacccaag cgtgcaagaa tacggcgatg aagctcactt
     8761 gggtaaatac ttttacccaa gtttgactaa aaaatgcctg ccatgccgaa tattctttag
     8821 gcagagcaaa tagaaccact aaaagtgcaa cggtataaat caacataata accgcggtcg
     8881 cacgttgcat cgcccaatcc cgcaaaccgt aatgggcacc ggtcaattta cgttctacca
     8941 taacaacgct cccaaaacga cagtcaaaac caatgcagaa gcaaatacgg ctttagcggt
     9001 attgcgcgca gtattcagct caaggccttt gtgcgcatcc aaaaataaaa agcggatacc
     9061 ggcgagagaa tggtgcagat aagcccacaa tacaccgatt aaaaccagct tgaccaaagg
     9121 atgggaaaca atggcacggt aagtttcaaa tgcagactct tgactcaggg taccggacag
     9181 gaaatacagc aggaaaggca gcataataaa cagcccgacc ccgctgatgc ggtgaaggat
     9241 ggaaactatc ccgggtatcg gcagacggat gttcggcaaa tccagataaa caggacgcgg
     9301 tttggcagac atagtcaatt cctctgtagt tatatatcga ctcaaaaacc gtaaacccat
     9361 tgctacactg ggttacataa acgttaattt acctgtttta tcccattttg aacagtgtat
     9421 tttaaaaaca aactgataga ttttgacaaa cacgcgtgga aacagcagat taaaagaaag
     9481 atttttagtt ttgccgcccc cttcccgaca cggtatcagc atccgacccc atccccaaaa
     9541 acaaaatgcc gtctgaaaaa atttcagacg gcattgtttt gccatatcgg tcaggctttc
     9601 aatttcgcat cggcatcgcg caacgcggta cgcaaacctt cctcgataac gggatggtag
     9661 aacggcatat ccagcatttg cggaacggtc atcttcattt gatgtgccca agccaacagg
     9721 tgcgccaaat gttcggcggc cggacctacg atttctgcgc cgatgaagcg gccggtggct
     9781 ttttcggcat acaggcgcat atggcctttg tttaccagca tcacgcggct gcggccttgg
     9841 tttttgaacg atacttcgcc gatgacaaat tcgtcggctt ggtattgcgc ggcaacctgc
     9901 gcgtatttca aaccgacaaa gccgatttgc ggactggtga acactacgcc gatggtgctg
     9961 cggcgcaaac cgccgccgat attcgggtag cggcctgcgt tatcgccggc aatcttgcct
    10021 tggtcggcgg cttcatgcag caggggcagt tggttggacg cgtcgcccgc aataaagata
    10081 tgcggaatac tggtctgcat agtcagcgga tcggcaacgg gtacgccgcg cgcatctttt
    10141 tcgatattga tgttttccaa accgatattg tcaacgttcg gacggcggcc tacggctgcc
    10201 agcatatatt cggcaacaaa tacgcctttt tcgccatcct gctcccaatg gacttctaca
    10261 ttgccgtctg cgtcgagttt ggcctcggtt ttagcatcca aatgcagttt caattcttca
    10321 ccgaacacgg ctttcgcctc gtctgaaacg acggggtcgg aaatgccgcc gatgatgcca
    10381 cccaaaccga aaatttcaac tttcacgccc aaacggtgca atgcctgacc cagttccaaa
    10441 ccgataacac ccggtccgaa cacggcaacg cgcttaggca gcgtatccca tgagaaaacg
    10501 tcatcgttga taatcaaacg attgcccaaa gactgccatt gcggcaggat gacgggacgc
    10561 gaaccggtag caatcacgaa actttttgcc gtaatttggg tatggtcgtc gatttggacg
    10621 gtatgctcgt cgataaactt agccgagccc atgatgcgct tgtcggcagg ccacttttcc
    10681 acatcagcaa cgacaaagcc gacaaaacgg tcgcgctcgg atttaacacg ccgcattact
    10741 tcttcaccgt tgacgacgat gctgtctttg tccaaatgca cgccgaacgg gtcggtatgc
    10801 agtgcgtggt ggcgcgcttc tgcggcggca atcaagagtt tggaaggcat acaacccacc
    10861 cgcgcgcagg tcgtgccgaa cacattgttt tcaatcaggt aaacattgtt cgaatgcaaa
    10921 cgggcattgc gaaacgcgcc cataccggca gtaccgccgc cgattacgac gacatctgct
    10981 tgaatttttt tcataatctt tgtccttctt tattaagcgt ccgaagcagc atcagcgtga
    11041 tgcgtatcag gttttcagac ggctttttta ataaactatc gacaatataa aaccaatagc
    11101 cattttaaaa gtttcgattt aaaacaataa tctcaaattc tacttgtaaa tatagagcta
    11161 ttcagaacga ccgtgtagcg tatcgtctga ataactctat tttcctgttc agacggtttt
    11221 attcaaaccg ccttaagcaa acagctatca gtttttagcc aagtaagctt ccaaatcttc
    11281 gctgccgccg atgtatttgc cgccgatgaa gacttgaggg gcagtcatct tgccggtaat
    11341 ggcgcgaacg gaagtaacgg ttgcatcttt gcccaatacg atttcttcgt aagacaaacc
    11401 tttgtcttgc aaagcttgtt tggctttagc gcagaattgg caacctggtt tagtgaaaat
    11461 tgccacagac tcttgagcct tccaatcggg agcaacgaat tgcagcatag tatctgcatc
    11521 ggatactttg aacggatcgc ccggttcttc aggttcgatg aacatttttt caaccacgcc
    11581 gtcgttaacc agcatggagt aacgccaaga gcgtttaccg aagcccaagt cttctttacc
    11641 gaccagcata cccatacctt cggtaaattc gccgttgccg tcaggaatca tgtagatgtt
    11701 gtcggattct tcttcggcag cccaagcgtt cattacgaac gtatcgttta cagatacgca
    11761 gtagattgcg tcaacgccgt tttctttgaa cgcgccgaac aattcgttgt aacgcggcag
    11821 gtgtgaagaa gaacaagtcg gggtaaatgc accgggcagg gagaatacga ctactttttt
    11881 gcctttgaac aaatcatcgg tagacacatc tttccaagtg tcgccgacgc gggtgcggaa
    11941 tactacggaa ggtacttttt gaccggtacg atcttgcaaa gccattttaa gctccttaat
    12001 agattggttt gagaaataat tgtgaatcgc tgggcattct accccatgca aaatgatttg
    12061 tataatttat agttcaaata atataaatta tttaaaacta tcaaacacaa ctccgatttg
    12121 cctgtttccc acatataaag ccgaattaga aaaaaacaag ctgcaatgaa aagattttcc
    12181 ggcaactgcg cccttgcgcc gcaaatcagg acaaaatacc gtctgaaagg ctttcagacg
    12241 gtatttattc atacggtctc ggcttatttc gccaattcgg cacgcaattt gtgggttacg
    12301 ttcatcatca cttggagttg ttccagagtt tctttccagc cgcgtgtttt caggccgcag
    12361 tccgggttaa cccacagacg ttcaaccggt acaacctcga tggctttgcg caacaggtgc
    12421 tccacttcgg cttctgtcgg tacgcgcggg ctgtggatgt cgtaaacccc cgggccgatg
    12481 tcgttcgggt atttgaattc gccgaacgcg gtcaagagtt ccatgtcgga acgtgaagtc
    12541 tcgatggtga tcacgtccgc atccattgca gcaatcgcag gcaggatatc gttgaactcg
    12601 gagtagcaca tatgagtgtg gatttgtgtg ctgtcttcgc aaccggcaga ggacaggcgg
    12661 aaggattcgc ccgcccagtt caggtaggca tcccaatcgg cgcgtttcag cggcaagcct
    12721 tcgcggatgg caggttcgtc aatttggatg actttgatgc ctgctttttc cagatccaat
    12781 acttcgtcgt tcagagccag tgcgatttgt ttgcacacgg tagagcgagg aatatcgttg
    12841 cggacaaaag accattgcag aatggttaca gggccggtca acataccttt catcgggcgt
    12901 ttggtcaggc tttgtgcgta agtagaccag gcgacagtca tggcttcagg acggcttacg
    12961 tcaccgaaga taatcggtgg tttaacacaa cgtgagccgt agctttgtac ccagccgtat
    13021 tgggtgaatg caaaaccgct caacaattcg ccgaagtatt cgaccatgtc gttacgctcg
    13081 gcttcgccgt gtaccagtac gtccaagtcc agtttttctt gctcttcaac taccaaggcg
    13141 atttcttttt tcatcgcggc ttcgtaatcg gcagcagaca gttcgccttt tttgaaggct
    13201 gcacgtgctt ggcggatttc ggtagtttgc gggaaagaac cgatgttggt agtcggcagc
    13261 agaggcaggt tcaaccatgc ttgttgcgct ttgatacggt cggcaaatgg agatttgcgt
    13321 tggtctgcgt tggcaggcaa atcggccagg cgtttggcaa cgtctgcacg atggatttcg
    13381 ctgctgttgg cacgggagtc ggcagcagct tggctggcgg ccagttcttc ggcaacagaa
    13441 tcacggcctt cgttcaatgc ggctttcaga acgcgcaatt cttgggtttt ttgcagggtg
    13501 aatgccaacc aagagtacag gtcaggtttg ttggctttca gtttttcttc aactgacaag
    13561 tcaaatggag tgtgcagcag agagcaagag ctggagatcc acaaacggtc gcccagtttg
    13621 gcttgcagag actcaacagt ttccaaaact ttgttcaggt tggcgcgcca aatattgcgg
    13681 ccgtcaatca cgccggcgga caggactttg tcgtagtcgg cgaacgcgtc cagttgctcg
    13741 ggagcgcgta ccaagtcgat gtgcagaccg tcaacaggca gggctttcag caatgcggcg
    13801 tgttcggcaa cagaaccgaa gtaagtgctc aacaggattt tggcacttac tttgttcaaa
    13861 gtagcgtaaa cgtctttgta ggcttccacc cattctttag gcaaatcgac agccaaagca
    13921 ggctcgtcga tttgaatcca ctcggcatcg gcttcaacca aagcagtcag gatttcaacg
    13981 taaacaggca acagtttagg caacaggctc agacggtcga attcgacggc gcctttttct
    14041 ttacccaccc acaggaaagt caacggacct acaacggtcg gtttggcttt cagaccgagg
    14101 gcttgggctt cttgcagttg ttggacgtag tgtttggcgt tggctttgaa ttcagtattg
    14161 gcgtggaatt caggcaccaa gtagtggtag ttggtgtcga accatttggt catttcgata
    14221 gcgaattggt ctttgttacc gcgcgccagt tggaagaatt gttccaaaga caggttttgg
    14281 ctgtcgaagc cgaagcgggc gggaatcgcg ccggtggcga cttgcaggtc gaggatgtgg
    14341 tcgtagaaag tgaaatcgcc tgcggcaacg taatcggcgt tggcagcagc ttggtgtttc
    14401 cagtttttct cgcgcaagtc tttagcaaca gccagcaatt cttgctcgct gatttctttg
    14461 cgccagtatt tttcttgggc gaatttcaat tcgcggaagg cgccgacacg cgggaagcct
    14521 gagaaatgta atgttgtcat gttgaactct ccagttggat tttgtaagaa ccggttcaat
    14581 ccgaatcggt cggtattgta aatcagaatg gctcggatgg ggcggcgttt tgcttttcag
    14641 acggcctcgg atgccgtctg aagccgtttt cagctttaag ggcgcacgcc taaaatatgg
    14701 cagatggcgt aagtcagctc gctgcggttg agcgtgtaga agtggaaatc tttcacgcct
    14761 tcgcgggata ggactttgac catatcgatg gcgatactgg cggcgacgag gttgcgcgtg
    14821 ccttggtcgt cgtccaaacc ttcatacatt tgcgacagcc agcttgggat tttgacgttg
    14881 gtaacctgcg ccattttgcc gagctgcttg aaattggtaa cgggcaggat gccggggacg
    14941 atttccacat cgatgcccaa catcacgcag cggtcgcgga agcgcaggta gcgttccaca
    15001 tcaaagaaaa attgggtgat gacgtggttc gcgcccgcat cgattttgcg tttcaaatta
    15061 atcaggtcgg cttgtgcgga tttcgcttcg ggatgcactt cgggatatgc tgctacagag
    15121 atgtcgaagt cggcgacgga gcgtaatagc ttaaccaagt cttcggcata aaacggtttt
    15181 ttctcgtaac cgggcggctc gtcgccgcgc agggcgacaa tgcggcggat gccgctgtcc
    15241 caataatctt tggcaatttg gcgcaattcg tcgggagaag cgtcgatacc ggtcaggtgc
    15301 ggcgcggctt ccaagccggt ttcttgctta atgcgtttga cgatgccgtg cgtgcggtcg
    15361 cgttcgccgg aatttgcgcc gtaggttacg gatacgaact tgggatgcag ggtttgcaga
    15421 cggtggatgg aatcccacag catcgtttcc atttgttcgt ttttcggcgg gaaaaattca
    15481 aacgaaacgt tgatgtcgcc tttcaaatcg gaaaggctgt tgtttaacgc attgatttct
    15541 tttgcgtaat tcatggctgc gtacctttta ttatctttta tatgatattt tcaggcaaca
    15601 taataaagtt gcgccaaaca tgagtcaatt tcaaaatttt cagatttatc atgaaaattt
    15661 ctaatatatt acaaaaatag ttaaatttcc ttgtacaagc cttctaattt atgataaagt
    15721 ttgttatgtt ataacaattc aactaaggcg atatatgaaa ccgaatattc atcctgacaa
    15781 ttatcgaacc gtcctttttt tcgacagcag cgccaatgaa ggctggttga ttcgttcttg
    15841 cgccgaaaca cacggaaaaa cgatggtttg gacagacggc aaagaatatc cgctgttttc
    15901 gctggatact tcttccgcat cccatcccgt ctatactggc aaacagcgca acgtcaacac
    15961 cgaaggccgt gccagcaaat tcaaccaacg tttccaatcc gtcatgtcat cgtttagaaa
    16021 ggacaaataa tgcaggttct gtcttcactc aaaaccgcca aacaacgcca ccgcgactgc
    16081 caaatcgtca ggcgcagggg caaagtttac gtcatctgca aaagcaatcc gcgttttaaa
    16141 gcacgccaac gctgactccc tgcccttcct gcttcggttg taaatcccct cctaccgcaa
    16201 gcccttttca tcaaatatgc cgtctgaaac agaaaaatgc gtttcaggcg gcattttttc
    16261 cgtcaatacg aatctggaat gtgtttgaaa tacagcatga ccaaatacca aaacagcgtc
    16321 gcggcggctg caccgagcag cacccacgcg ctgattttgg cgacatcgcg cagggcgcgt
    16381 ttctgcctgc ggctgaagag gcggttgata atcagcgcgg caagtgcgaa aaagaaaaaa
    16441 atacggaaaa gtctgcctat catatcggga agcggggtta gggctgtctg aaaaagtatg
    16501 gatcggttgc ggcggcatag ggacggatgt ttcatcgcat cgggctgctt gtccgaccgt
    16561 gtcaaaaagt catgccgttt gctatataat aacgcttttc gccgcatttg ttggaacagg
    16621 atatgagtca aaatgcctcg gtgggcattg taacgcccca aaaaattccg tttgagatgc
    16681 cgctggtttt ggaaaacggt aaaactttgc cgcgtttcga tctgatgatt gaaacctacg
    16741 gcgagctgaa tgccgaaaaa aacaatgcgg ttttaatctg ccacgcgctg tcgggcaacc
    16801 atcatgttgc gggcaggcat tcggcggagg ataaatatgc cggctggtgg gacaatatgg
    16861 tcggtcccgg caaaccgatt gatacggaac gttttttcgt ggtcggtttg aacaatctgg
    16921 gcggctgcga cggcagcagc ggacctttgt cgatcaatcc tgaaacgggc agggaatacg
    16981 gcgcggattt tccggtggtt acggtgaagg actgggtaaa atcccaagcc gcgcttaccg
    17041 attatctcgg catcgggcaa tgggcggcgg ttgtcggcgg cagcttgggc ggtatgcagg
    17101 ctttgcagtg gacgatttcc tatcccgagc gcgtgcgcca tgccttagtg attgcgtccg
    17161 cgccgaaact gtccacgcaa aatatcgcgt ttaatgatgt agcacgtcag gcgattttga
    17221 ccgatcccga tttcaacgaa ggacattacc gcagccgcaa caccgttccc gctcggggct
    17281 tgcggattgc ccgcatgatg gggcacatca cctatcttgc cgaagacggt ttgggcaaaa
    17341 aattcggacg cgatttgcgt tccaacggct atcaatacgg ctatggcgtt gaatttgaag
    17401 tagaatccta tctgcgctat caaggcgaca aattcgtcgg gcggtttgat gccaacacct
    17461 atttgctgat gaccaaggct ttggactatt tcgatccggc ggcggatttc ggcaacagcc
    17521 tgacccgcgc cctgcaaaat gtgaaagcga aattctttgt cgccagcttc agcaccgact
    17581 ggcgtttcgc acccgaacgt tcgcacgaac tggtcaaggc actgattgcc gcccaaaaat
    17641 ccgtgcagta tatcgaagtc aaatccgcac acgggcacga tgccttttta atggaagacg
    17701 aagcctatat gcgtgcggtc gccgcctata tgaacaacgt ttataaggaa tgtcagcaat
    17761 gaacctgcgc gatgatttgc aactgattta cgaccggata cccgaaggca gccgcgtctt
    17821 ggacttgggc tgcggcgacg gcgaactgct tgccgcattg gtcgaacaca aaaaatgcag
    17881 cggctacggc atcgaaatcg acacaaatag cgtcatcgcc gcgatgtcgc gcggcgtaaa
    17941 tgttatccaa gccgatttgg aagaaggttt aaccgcattc aacgatcaaa gttttgatgt
    18001 gattgtgttg agccaaacca tccaagcgat gcagaatacc gaaaaaatcc tgcgctgcct
    18061 gatgcgcgtg gcaaaacagg caatcgtcag cttcccgaat ttcggctact ggcgcaaccg
    18121 cgtccaaatc gcactcggcg gacatatgcc ggtttccgaa cgtatgccct accattggta
    18181 tgatacgccg aacatccatt ggtgtacgct caaagacttt gatttgttgt gcgccaaaaa
    18241 caacatacgc gtcctcgagc gcgccgtgat gacgggcaac agacaggtca aacatttccc
    18301 caaccttttg ggcagccttg cgttttaccg cgtcgggtaa gacagattga gaaccttgtc
    18361 ggcaataaca ggttcttcgg ttctattaac aacaggccgt ctgaaaaatg aaatggcagg
    18421 ttttcagacg gcctctttaa tattggaaac aatagaatga aaaacaaaac ctcatcactt
    18481 ctcttatggc ttgccgcaat gatgctgacc gcgtgttccc cgagcaaaga agataaaacg
    18541 aaagaaaacg gcgcatccgc cgcctcgtcc acggcatccg ccgcttcgtc ttccgcgccc
    18601 caaaccgatt tgcaaccggc cgcatccgcc cctgataacg tcaagcaggc agaaagcgcg
    18661 ccgccgtcaa attgcaccga cctgcacccc gccaccggca ttgacgatct catgcagcaa
    18721 atcgccgaac acatcgactc ggactgtctg tttgcccttt cccatcacga actggaaacc
    18781 cgtttcggct tacccggcgg cggctatgac aacatacagc ggctgctgtt tcccgacatc
    18841 cgccctgaag atcccgacta ccatcagaaa atcatactgg caattgaaga cttgcgttac
    18901 ggaaagcgca cgatcagccg gcaggcacaa gatgccttga tggaacagga acgccgcctc
    18961 cgagaagcga cgctgttgct gatacagggc agtcaagaaa cccgcggaca aggcgaggag
    19021 ccgaaacgca cgcgttattt tgaagtttcg gcaacccctg cctattcgag ccggcacaac
    19081 aacggacttg gcggcaattt ccaatacatc ggccaattgc ccggctatct gaaaatacac
    19141 ggagaaatgc ttgaaaacca atcactcttc cggctgtcca accgtgaacg caatcccgac
    19201 aaaccgtttt tagacatcca ttttgacgaa aatggcaaaa tcacgcgtat tgtcgtttac
    19261 gaaaaaaaca tctacttcaa tccaaacttg gggcgaagat aaaaaaatgc cgtctgaaac
    19321 gttttcagac ggcatttttc aatgcaacaa atcaagcgcg tttgcggaat tcgccggtgc
    19381 gggtatcgat ttcgattttg tcgccgtttt cgatgtaaga catcacttgg atttcggtgc
    19441 ccccgaccag gcgcgcggtt ttcatcactt tgcctgaagt atcgcctttg acggcaggct
    19501 cggtatactc gacttcgcgt acgatgatgg tgggcagttc tacggagatg gggttgcctt
    19561 cgtagaaggt aacttcgcat tggtcttcca taccgtcaac gatgaatttc aacgcgtcgc
    19621 cgatgttgtc ggcttcgatt tcgtattggt tgaattcttc gtccataaag acgtacatcg
    19681 gatcggcaaa gtagctgtac gtacagtttt tgcgggacag gatgaccacg tcgaatttgt
    19741 cgtcggcttt gtaaatggtt tcggaagccg cgccggtcag caggtttttc agtttcatgc
    19801 tgactttggc ggaagagcgg ccgcctttga tgtattcggt tttttgaacg accataggat
    19861 cgttgccgac cataaataca ttgccggcgc gcagttcttg tgctgttttc attgtgattt
    19921 tccaatcaaa tcggttgtcg taaaacgcac tattctagcg tattttttga tgctttgaaa
    19981 caaaggcggc gagtttttcg gatgcggaag gctgcccgaa aagataacgg ctccaatcct
    20041 ccgcgccttg ccgccagccg ttttgatgtt gttgcaggat ttgccaacat tcgaggcgtt
    20101 gcgtggcgga taaagcccct ccgccgttga ggtcgtctga aaggcagcgg tgtgccgatg
    20161 cggtttcggg cgtgtagaaa ccgtgtgcct tatcccaaaa ggcgtggagt ttgtcgagat
    20221 ggacattctc gtcttgcgga tagatgtgcc aaaagaaggg ttttccggca agctgggcgc
    20281 gcacgaaact gtcttcgccg cggatgacgg cgcagtcggc aaggtgcagc agtttgtcga
    20341 agtcctgttg cggcacgaaa gggattttga cgaggcggac ggatgccgtc tgaaaaacat
    20401 cgccgtcgtt ttgcagggca tcttgcggaa taacgccgtt ttgtttgagg ctgtcgataa
    20461 tttgcgcccc cgccagcaac agtgtcaacg gactgcctgc ctgtcgccac atttccagcc
    20521 actttgccca aacatcgctc cgatagccga aaagcagcca ttcgggggcg tttttttcgg
    20581 gaagcatcag cctcttgcgc aagactccgc tatcgaaacg gacggcttcg cagtaatcac
    20641 gttcgcgtat caacccgccg cttttttcgc tgaaacccat aaaccaaaaa tatttttgaa
    20701 caccctcctg cggcgaaggc atcagatgca gcctttcatt gctttcctcc gcgctcaaat
    20761 attcccaatt cagccaaagc ggcttgtgtc ggcggataat gtgcagcaca ttttcgggca
    20821 ggtcgcaggc aaaagtttcg atgacgacat cgggaacagg cgcggtatca atatctgccg
    20881 catcggaatg ccaagtgcgg acatgaatat cctgatgaac gcagggaaca tcgggcaaat
    20941 cagggcaaag cgcacgcaag gcggacacat cgtccgtcca caaatgcacc cgccaaccga
    21001 gttcgcggtg caaaacacgg gcgagccgcc acgaaacgcc gatgtcgccg aaattgtcga
    21061 tgaccttgca aaaaatccaa cagacaaaag gaggagtatt cataggaata acggaaacaa
    21121 gctaaaacgc gccgaaatag tggaacaaat acacaaccag caaaacaatc ggaataaaca
    21181 gcaacatggt ttgacgtttc aaatcaaact cttgtttcaa atgatgcttg atggtgtcga
    21241 aaaggacgaa tttgaacaaa aacgtcgctt cgcaggcaag gatgatgccg ttgatcagat
    21301 gctggggttt gtcttcgggc ggattggcga cgaaaacggc aagcgtcgcc aaagggatga
    21361 ggcagacgac aagccagcgg acaagcaggt ttcgggacat tgcaaggctt tcaaaaaagc
    21421 aaaacgccat tatcgcccca agcgcacgcc ttgtctaacg gacgcgccgg cgatgccgtc
    21481 tgaagccttg ccgcaggaaa acaccgcacc gccgaacctt taaatacgcc cgagacgggc
    21541 gttccccgaa aaatcggacg ctgccgccga tgcctgcgga caaggctgca tcgggcgcgg
    21601 gcatattgaa aacccggcgc gtcggtttga aat
//
LOCUS       DAWEYF010000017        21603 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.017, whole genome shotgun sequence.
ACCESSION   DAWEYF010000017 DAWEYF010000000
VERSION     DAWEYF010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.017"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(324..4493)
                     /locus_tag="WGN93_000451"
     CDS             complement(324..4493)
                     /locus_tag="WGN93_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ0226403.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMHRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGSFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTGKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASATNWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4548..6395)
                     /locus_tag="WGN93_000452"
     CDS             complement(4548..6395)
                     /locus_tag="WGN93_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ0226404.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAS
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGAFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNANVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6925..8154
                     /gene="sstT"
                     /locus_tag="WGN93_000453"
     CDS             6925..8154
                     /gene="sstT"
                     /locus_tag="WGN93_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ0226405.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8266..9546
                     /locus_tag="WGN93_000454"
     CDS             8266..9546
                     /locus_tag="WGN93_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ0226406.1"
                     /translation="MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNAGNTAAQGTNQAENNQVGGSQNPAPSSNPNATNGGNFGRVDLANGVLIDGPSQNI
                     TLTHCKSDSCNGDNLLSEEAPSKSEFEQLSDEDKIKKYKKDGEKFTGLVADRLQMKGT
                     NQYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLSGGSYALSVQGKPAKGEMLAGTAVYNGEVLHFHTENGRSYP
                     TRGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGNWTENGGGDVSGRF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9622..9837)
                     /locus_tag="WGN93_000455"
     CDS             complement(9622..9837)
                     /locus_tag="WGN93_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226407.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKMKDDGFIN"
     gene            complement(9830..10045)
                     /locus_tag="WGN93_000456"
     CDS             complement(9830..10045)
                     /locus_tag="WGN93_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ0226408.1"
                     /translation="MKEYKVVIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(10120..11463)
                     /gene="argG"
                     /locus_tag="WGN93_000457"
     CDS             complement(10120..11463)
                     /gene="argG"
                     /locus_tag="WGN93_000457"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ0226409.1"
                     /translation="MSQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRTQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIKPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKK"
     gene            11790..11930
                     /locus_tag="WGN93_000458"
     CDS             11790..11930
                     /locus_tag="WGN93_000458"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226410.1"
                     /translation="MQTAALKQTLPEKRKLDPLPNPLPWEREQITAPSTFSDGIGKET
                     HL"
     gene            11927..12727
                     /locus_tag="WGN93_000459"
     CDS             11927..12727
                     /locus_tag="WGN93_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ0226411.1"
                     /translation="MNAFNLTIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALDLPVVRHPEAAKFIEG
                     VTRKRGEPLDSPEHAQRLKMADFPQGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYVGRFNQTKRGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12767..13753
                     /locus_tag="WGN93_000460"
     CDS             12767..13753
                     /locus_tag="WGN93_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ0226412.1"
                     /translation="MQYRIRRENEAPEAKNTGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            14410..14672
                     /locus_tag="WGN93_000461"
                     /pseudo
     CDS             14410..14672
                     /locus_tag="WGN93_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14710..15084)
                     /locus_tag="WGN93_000462"
                     /pseudo
     CDS             complement(14710..15084)
                     /locus_tag="WGN93_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(15257..15613)
                     /locus_tag="WGN93_000463"
     CDS             complement(15257..15613)
                     /locus_tag="WGN93_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ0226413.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     ILEYAIKNEKTVIFHF"
     gene            complement(15756..16100)
                     /locus_tag="WGN93_000464"
     CDS             complement(15756..16100)
                     /locus_tag="WGN93_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226414.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGVFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(16259..16659)
                     /locus_tag="WGN93_000465"
                     /pseudo
     CDS             complement(16259..16659)
                     /locus_tag="WGN93_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16663..17403)
                     /locus_tag="WGN93_000466"
                     /pseudo
     CDS             complement(16663..17403)
                     /locus_tag="WGN93_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(17473..17790)
                     /locus_tag="WGN93_000467"
     CDS             complement(17473..17790)
                     /locus_tag="WGN93_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226415.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(17787..18398)
                     /locus_tag="WGN93_000468"
                     /pseudo
     CDS             complement(17787..18398)
                     /locus_tag="WGN93_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253822.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(18482..18784)
                     /locus_tag="WGN93_000469"
     CDS             complement(18482..18784)
                     /locus_tag="WGN93_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226416.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLGGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(18963..19169)
                     /locus_tag="WGN93_000470"
     CDS             complement(18963..19169)
                     /locus_tag="WGN93_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226417.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(19135..19884)
                     /gene="mafB"
                     /locus_tag="WGN93_000471"
                     /pseudo
     CDS             complement(19135..19884)
                     /gene="mafB"
                     /locus_tag="WGN93_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257312.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(20310..20654)
                     /locus_tag="WGN93_000472"
     CDS             complement(20310..20654)
                     /locus_tag="WGN93_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226418.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(20692..21036)
                     /locus_tag="WGN93_000473"
     CDS             complement(20692..21036)
                     /locus_tag="WGN93_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226419.1"
                     /translation="MFLDDVNVFLDDLNVFLDDLNTNPITDEWYMSNFADKHIKILES
                     YEAFDILKQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQ
                     EISQDILNEIFR"
     gene            complement(21039..21227)
                     /locus_tag="WGN93_000474"
     CDS             complement(21039..21227)
                     /locus_tag="WGN93_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ0226420.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENSRTGEKTDFKFKD"
     gene            complement(21297..21603)
                     /locus_tag="WGN93_000475"
                     /pseudo
     CDS             complement(21297..21603)
                     /locus_tag="WGN93_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT         5129 a         5054 c         5429 g         5991 t
ORIGIN      
        1 aagtggcggg aatgacggtt cgggcattcc ttaaattacc tgtgtatcgc tgtaaatctt
       61 agagatggcg gaatatagcg gattaacaaa aaccggtacg gcgttgcctc gccttggctc
      121 aaagagaacg attctctaag gtgctcaagc accgagtgaa tcggttccgt actatttgta
      181 ctgtctgcgg cttcgtcgcc ttatcctgat ttttgttaat tcactatatc gattctgttc
      241 ccttgcaggc ggacggcggc ggcggacggt ggaaaagcag gttttcaaat gtccggtttg
      301 gcggcgcgcc gtctgaaaac cgcttatttt cctttgctgt ttccggcgga gtcttttttg
      361 tccgaaccgg agaagcggtc gaaacgtatg gtgtatgtca gctcgccgcc cgacgaacgg
      421 ctgccgatac gggcaaccgc ctgtatggcg cgggtcagcc ggtaaatcag tttgacggac
      481 tgttccgcgc tggagatgct gtattcgtag ccgatgtaga gtttgccggt cagttgtttg
      541 ccgacggtca gcacctgttc ggcggggttg agttcgccgg tttgcgcgtt gcggctgcgc
      601 ttgctggtaa agcccaaatc atccaccagc ccgatgcggt cgttgatttg cccggcaagc
      661 agcgcgcctg cggctgcgga cagggcggca ttgtcgccgc tgctgccgct gccggcgcgg
      721 ttgaggatga gccaagagag cttgtctttt tcactcatcg gttcgtttgc cgtcagcgta
      781 atgcgcgggc tgttgaggct gcccaatatt tccacgcccg caccgacggg ggaaaggcgg
      841 cgttcggcgc ggatgttgag gttggggtcg ttgagcgggc cgacaaagga gaccgtgcct
      901 ttggtaatgt ccaaatcctg cccgtatgcc ttataacgcc ctttgatgac gcggaccgtg
      961 cccacgcccc gcacgcttcc gcccgattgg gcggtcaggg tcagtttgcc gcctatggta
     1021 acgtccgcgc cgtagccggc gaagcggatg ccgtcattga ggtctaaagt caggttcata
     1081 ttgacgggga gcggtgccgc cgcctctttt ttgacttcgc ctaatacgac gacatcgtcg
     1141 ccgacggacg gcatcgagga tttttgcgaa ccgaacagcc cctgatccgt tttaatcatc
     1201 ccggtaacgg atatgccttt ttgcggcgaa tagcgcaggc gggtgttgcc ggaaaccgtc
     1261 aggcggcggt tggggcggga caggatgcgg tatttgtcga acaccgcgcc gatatcgaca
     1321 tcgggtccgc tgttttccat accgaccgta ccggagagtt ccgccgtccc ttcgtgacgg
     1381 aatttcaggc tgtcgattac ccatttcctg cctgcgatat gcgaacgcag cgaaccgttg
     1441 tccaagatga tgccttgggt ttggttgcgg taatagagct tgtcgccgtt gatgctgccg
     1501 cccaagtgcg ggtcggcgat gctgccgccg agggttacgg cggcattcag gctgcctttg
     1561 acggtttgtc cgacgggcag gaagttgcgg aatacttcgg catcggcaac ggtcaggttg
     1621 agtttcccgc ccaggggcga ggtactgaaa gaattacttt gcccgacggt gatgttgccg
     1681 ttgattttcc cgtagttgct gctgccgttg acggcggcat tgacggacgg agagccgacc
     1741 cgtccgccga tttgcgcggc ggcattcagg ctgccggtaa tgttttgcgc ggcggcgggc
     1801 agaaagggct tcaatgcgcc caagtcggga agggaggcgg taatcctgcc gccgagcggt
     1861 gcatttgcca tattgccgcc gaaggcgttg ccgatgtcca aatcggcgtt aatccgcccg
     1921 aaacgcgcgc cgccgtcaag caggattccg atgcggtcgt tttgaaagcg cgttttcagg
     1981 gaaaatgcgt tcaaacccaa agcctgcccg ccgggcaata cggcatcgcc gctttgccgg
     2041 ctgatattga ggtagccgcg cgcgttgcgc ccgtaggcga catcccagtc gccgtttaaa
     2101 accagattgt gttcgaaggg cggtttgaag aaattgtgca actcggcgat atgcagaccg
     2161 tgtgcgccgc cttttgccga tatgccggtt tttttatccc aagaaaagtg ttgcaggttg
     2221 aggctgccgc ccattgcctg ccaatttgtc gcacttgccg ccacgcgttc cgcaccggct
     2281 tcgagcgtca tacggttttg cagcttgagg ttgaatgcgc cgccgatgtc gaggatgccg
     2341 atgctgcctt tccatcgggt aagttccctg ttgatgccgc ctgaagcgtc caaatcgaat
     2401 ttgaacggtt tgccatccag cgtcatggcg gcgtgtgtgc ggatgcggtg ctgcacgccc
     2461 gtgccgtcca gcatcaggtc ggcggtatcg acaaccgccg ctccgcccga cagcgaaagg
     2521 cggctgcctt tgatgtcggc gcgtatcggg cggcttgtgt cgggcgaacc tttgagcgtg
     2581 aaatcgagcg aacggatgtc tgccgccttg ccgatgtgca ggttgcgcgc cgcgccggaa
     2641 aggtcggttt caaaggttcg gatgccgccg tccaaatcgc cggaaaggtg tccgcgtaca
     2701 tttaaagacc ccgcgagtcc gaaaccgaaa cgggataaat cgggtgcggt gatattgagg
     2761 ttaagccggt cgcctttttt gccgaagccg ccgtctgttt tgatgatgtt ccgccccagc
     2821 cgcaaatcga cggcggcacg cggaaggtgg cgggactcgt aaacaatgtc ggcactgccg
     2881 gcaatcggta cgccgttgaa cgtgccgggt aaaaaccgca ttttgcctgt gaatttctct
     2941 tttgccagtt cgccggcaag gtttattgag ccgttgatat tgcctgccgg aagttgcgga
     3001 tcgatgcgcg aagggtcgaa tgcgcgggaa cggatgtcca gcttgagcag gcggtcttta
     3061 aacagctcga gatagccttg cgcggtcagg ctgccttgcc cggcggcgat gttgacggtg
     3121 tcgagcacca gtttccgctg tccgtttgcg gggtcgcttg caatggcgag gctgccgtcc
     3181 gtgcgcgccg tgccgatgcc gagttgccaa gagattttgg gcgaggcggt cgtgccaccg
     3241 atgccgatgc tgccgtccaa cctgcctttg aacgcggttt gcagtacgtc ttccgcgccg
     3301 acggagttga tgcctatatt taaatcgagg atgtcttttc cggtgtcgat tttgcccgac
     3361 agcctgatgc cgccccgtcc gagcagggcg gcggacgtat tgccgatatg caccgtgccg
     3421 tcctgccgga tgacaaagct gcctaaaacc tgacggacgg ggatgccgtt gcggtcggca
     3481 aaaccggctt tggtgttttc caaatcgagc gagccttcca gcgcgatgcc gtctgaaaac
     3541 gacgggatgg cggtcaggtc gaaattcagc ccggcatcgg gcagggaagg tacgaaggcg
     3601 gccggattga tgttgaaccc tttgaccagt acttcttcca atgttttatc caatgattcg
     3661 gcaaacgggt ggatgacgga ttttcccgag aggcggatat tgccgccgtc gatcgccagt
     3721 tcggcgcgca catccttcag gctgccgctc agccgagccg tactgtgtat ggttttgcct
     3781 tcgagtccgc ctttggtgta aatggcggta tcgagggcaa acggtttttt caagccgacc
     3841 gaggccgccc ccgacgaact gctccacggc gtgtcggcgg ccttcaggtc aaggcggtgt
     3901 cctttgcggt cgtaacggta tgaagcatcc agccgttcga gatagacggt ttgtttgtca
     3961 aaggctttgc ccatgctgat tttgcccgtc tcgaagcggt cgagatagac ggcggcaggc
     4021 aggtctatgc tgtcgggaag gctgagcggc gggcgttctt ctttaggcgg agtcggtttg
     4081 gtaacgatgg cgatgtcgcc ggcggaaatt tcggtaatgt gcaggctgcg gtgcatcagt
     4141 tcggacggtt tccacgcgaa gcggaagcgg ctgattttaa ggtctgcccc ctcggtttct
     4201 atcgaccaat tgtcgccgtc gaagccgtcg agcagcgtgc ctttgaggtt ttgggaggaa
     4261 atgtttacgc cgaaccaaga cgggatttgg tacagcccga agcgcaaacc cgcttccgtg
     4321 ccggcgagcc agccgaggaa acatactgcc aaaatcagaa cagacagcag tgccgccgac
     4381 agcttcagca gcgggcggcg tttttttgcc ggcggggtag ggcggtgttc agacggcatt
     4441 ttgcgcgtgc cgttttcggt cggatcggta tctgtcggtg cggtatcggt cataatgtct
     4501 gtttcaaaat ggtttgctgc aatgccgtct gaagcggccg tatcggttta gaagcgcgtt
     4561 cccaagctga tgtgccagcg gattttcttg tcgctgtgcc cgtaggcgat gtcgaaggaa
     4621 aacggcgcga gcgggctgaa ccagcgcacg cccagtcccg aaccgtgttt cagcttcata
     4681 cgtttgaaat tggcggcggc gtcgcccata tcgtggaaca ccgcgccgga aagggtgcgc
     4741 gtaaacggca gttggtattc caggctgccc accaagaggg cgcgttcggg caggaccgat
     4801 ccgttcgggc cggcaagccc gatgctgtcg agttcgtaac cgcgcacgga agacgcgccg
     4861 ccgctgcgga acatcagccc tgaaggaacg ttggcattgt cgcgggcaac ggtgtaaccc
     4921 gcttgtccgc gtatgatgaa cgtgccgagt tttttgtttt cgggcgtgaa gaaataacct
     4981 gcgcgggcag aggtgcggat cagcgcggtg gaggacagga atgcgcccaa agtcgtaccg
     5041 attttgccgt cgaggtaatg gccgttttcg ggatgcagca cgttgttgag cagctggcgt
     5101 ttccaagagg cggtcagcat cgtggcgtgg ctgttgccca aatcgatatc cgagccgggg
     5161 attttccggc cttctgcgag aaactccgcc cccagcctgg catcgatgcc cgcgcggtcg
     5221 cgcacatacc agatgccgcc ggagaaggcg cgtttttcga ggttttgggt ggtcgaacgg
     5281 ttgtaggaaa cgttgcttgt ccagtagttg ccccgatagt tgcgcggctg gctgatgccg
     5341 gcggcaagcg tggtttcgta tttgtccata tcccagacga ccgaaccgat atagcctttg
     5401 ttgaagaggt tgtaatagtc gtaggcgatt ttgccgccca aaccgtattc cgaatcgagg
     5461 cggatgccgg tttcgagctt gtggcgtttg acctcggtta cgctgacttt gacggggacg
     5521 cggtcgcctt ggaggcggtc gaagtcggct tgtacggacg cgccggaata atgcccgttt
     5581 tgttcgagcg cctgttggaa gtcgagcagc aggtcgaggt cgtagggcgt gcccggttgg
     5641 aagcgcgcca ggccggagac gatttgttcg gggtaacgct gcgtgccggt aatttcaaag
     5701 tcgccgaagg cgatggggcg gccgctgtcc acgacgacgt tcaaatcggc ggtggcggta
     5761 tcggggttga cggccgcccg ggtgttgccg agcttggcaa gcgggtaggc tttgcgcgtt
     5821 accgcgccga ggacggaagt tttgctgttt tcccaactgt cctgatcgaa atcactgcct
     5881 accggctgct gccagttttc cagcgcgttg cggtagtatt cggcgaggtt gccgtctgaa
     5941 aggatgtcgc cgaggatggc gacgccgacg ttggcgattt tggtgcgcgg gcccggtgtg
     6001 atgtgtaccg tataagctcc gtctttttcc gtcaggctga ctttgctgct gaaatagcct
     6061 ttgctgcgga gcatcgtttt aacgttgtcc gatgcttctt cggcgaggaa gcccgtctgt
     6121 tctttgtcca atacttcttc ctgctgctgc gtgatgagcg gcaggtgttc ttcgaccata
     6181 tctttgattt cactgtcctg cgtgtcgatg cggacgggga atttgggttt taatttgact
     6241 gattcggtgt cggggctttt gtttttgaac aatgcgaaac ccgccgcctt gttttcggaa
     6301 aggtcggcgg caggcgcgta tgcgtgcgga aagaaaaata aagccggcag gagcagggcg
     6361 gtcggtttaa tcatcatggt acgggtatcg tgcatcggtg tggcggattt cgattctaac
     6421 actgttcgga cggggcggga cgcttcagac ggcatactgc cgccggtatt tcggaggttg
     6481 cggcccgctg gaaatgtatc tgcttgtttt aaggtatttt gtttctaatc cgcatatgga
     6541 aaacaggctg cgtttcggaa tagtgtcgga aaataaacgg gattaaataa atttattttc
     6601 gttcaataaa ttaaaccgtc gcgccgaatg ataaagcaaa gcctgtccgg cactgcatag
     6661 ggcaaatcaa cgcaaccttc atagtggatt aacaaaaacc agtacggcgt tggctcgcct
     6721 tagctcaaag agaacgattc tttaaggtgc tgaagcacca agtgaatcgg ttccgtacta
     6781 tttgtactgt ctgcggcttc gtcgccttgt catgattttt gttaatccac tataaaacac
     6841 agccgaaaaa taaaaaaaac acagagaatg agttttcttt taaaatacaa cattttttaa
     6901 catatcacaa cataaggaag aattatggcg ttcggcaaat ccttatttca tgcgatcggc
     6961 cgcgtcagcc tggtcaggca gattgccgcc ggtttggcgt tgggcatcgt aatcggttcg
     7021 gtttccccgc aactgggctt ggcggcaggc ttgttcggca gcctgtttgt cggcgcgctc
     7081 aaagcggtcg cgccggtttt ggtatttatt ttggtggcgg ccacaatcgc gcagcaccaa
     7141 aaaggcaaca aggcgcatat caggccgatt atcatccttt acctcatcgg tacgttttcc
     7201 gcagccctga ccgccgtcat cgccggtatg gttttcccga cgcacattgt tttggcgggc
     7261 gcgggcgatg tgtccgccgc gccgccttcc ggcattgtgg aagtattgaa atcgctgctg
     7321 atgaacctgg tcgccaaccc gattaacgcg attgccaatg ccaactatat cggcattttg
     7381 gcttgggctt tggttttggg cgcggcgttg cggaatcacg gttcggacgt tacgcggcag
     7441 gtcgttgccg atttggcgga agcggtttcc accgtcgtga aatggattat ccgttttgcc
     7501 cctttgggca ttttcgggct ggtgtcgtcc acaatcgcgg agacgggttt cggcgcgctg
     7561 gcgggttatg cgaagctgct tgcggtactg ttgggctgta tggcgtttat cgcgctggtg
     7621 gtcaatcccg ccatcgtgtg gtggaaaatc cgccgcaacc cttatccgct ggtgtttacc
     7681 tgcctgcgcg aaagcggcgt gtatgccttc tttacccgtt cttccgccgc caatatcccc
     7741 gtgaatatgg ctttggcgaa aaaactgggg ctgcacgaag acacttattc gatttccatc
     7801 ccgttggggg cgaccgtcaa tatgggcggc gcggcgatta cgattaccgt tttggctatg
     7861 gcggcggcgc acactcaagg catacaggtt gattttgcca ccgcgctgct gttgagcctg
     7921 gtggcgacgg tcagcgcgtg cggcgcgtcc ggtgtggcag gcggttcgct gctgctgatt
     7981 ccgctggcgt gcagcctgtt cggcatcagc aacgatgtcg ctatgcaggt ggtcgccgtc
     8041 ggctttatca tcggcgtgat tcaggattcg gcggaaacgg cgttgaattc ttcaaccgat
     8101 gttttgttta ccgctgccgc cgatttgggt cgacagagaa accgggcgga ataaaccaag
     8161 ctatgccgtc tgaagcccgt ttggcgttca gacggcatat ttttacaatt ttatgggcat
     8221 atggcggaaa caataccggc tgccttgaat atgaagggga tgatgatgtt taaacgcagt
     8281 gtgattgcaa tggcttgtat tgttgccctt tcagcctgtg ggggcggcgg tggcggatcg
     8341 cccgatgtta agtcggcgga cacgccgtca aaaccggccg ctcctgttgt tgctgaaaaa
     8401 gagacagagg taaaagaaga tgcgccacag gcaggttctc aaggacaggg cgcgccatcc
     8461 acacaaggca gccaagatat ggcggcagtt tcggcagaaa atacaggcaa tggcggtgcg
     8521 gcaacaacgg acaaacccaa aaatgaagac gagggaccgc aaaatgatat gccgcaaaat
     8581 gccggcaata cggctgccca aggtacaaat caagccgaaa acaatcaagt cggcggctct
     8641 caaaatcctg ccccttcaag caatcctaat gccacgaatg gtggcaattt tggaagggtt
     8701 gatttggcta acggtgtttt gattgacgga ccgtcgcaaa atataacgtt gacccattgt
     8761 aaaagcgatt cttgtaatgg tgataatcta ttaagcgaag aagcaccgtc aaaatcagaa
     8821 tttgaacaat taagtgatga agacaaaatt aagaaatata aaaaagatgg agaaaagttt
     8881 accggtttgg ttgctgatag gttacagatg aaaggaacca atcaatatat tattttttac
     8941 aaacctaaaa ccacttcatc tgcgcgattc aggcgttctg cacggtctag gaggtcgctt
     9001 cccgccgaga tgccgctgat tcccgtcaat caggcggata cgctgattgt cgatggggaa
     9061 gcggtcagcc tgacggggca ttccggcaat attttcgcgc ccgaagggaa ttaccggtat
     9121 ctgacttacg gggcggaaaa attgtccggc ggatcgtatg ccctcagtgt gcaaggcaaa
     9181 ccggcaaaag gcgaaatgct tgctggcacg gcagtgtaca acggcgaagt gctgcatttc
     9241 catacggaaa acggccgttc gtacccgacc agaggcaggt ttgccgcaaa agtcgatttt
     9301 ggcagcaaat ctgtggacgg cattatcgac agcggcgatg atttgcatat gggtacgcaa
     9361 aaattcaaag ccgccatcga tggaaacggc tttaagggga attggacgga aaatggcggc
     9421 ggggatgttt ccggaaggtt ttacggtccg gccggcgagg aagtggcggg gaaatacagc
     9481 tatcgcccga cagatgcgga aaagggcgga ttcggcgtgt ttgccggcaa aaaagagcag
     9541 gattgatgtt gatgccgtct gaagcgaggg cgttcagacg gcattgtgat gtttgggtcg
     9601 cgggtccggt tcaagtccgc atcagttgat aaacccgtcg tctttcattt tcttttcgga
     9661 aaaatattga ccgcatacca gtaaggcggc gaggatgatg acaaacagcc ccgccatagt
     9721 cagtgtgatt ttgaagaaca attccgcttc gagaaaagaa aaccaaagtt gcacaatcag
     9781 cagcagcacc cagccggcaa acagtccgag acaggcataa acgccgagct taaacacggt
     9841 cccgctccaa aatgacgacg taggcctcgc gtttgaaaaa caacagcata cggcgcaaat
     9901 ctttttccat cgttacaacc cgccagcctt cgggggtttg tttgttgagg aacgcgctga
     9961 aattgacggg gttgaccttt gccgcgccga aaaacaggct ggacaacagg ctttcctgat
    10021 aaatgacgac tttgtattct ttcataggat tccttttaac ataagggatc atcttttcag
    10081 acgacccctt aagttgctaa tgatgcaaaa cagcaaacct tatttcttat tgcccaactg
    10141 cggcaatacc gaaccttcgc ccaatgccaa caaaccgctt tgcgagtaaa tgcccagttt
    10201 ggcgcgggtg tcggtaatgt cgaggttgcg catagtcagt tgtccgatac ggtcgagcgg
    10261 tgtgaacgct gcgtcttcga ctttttccat actcaggcgt tcgggttggt aggtcaggtt
    10321 gggcgattcg gtgttcagaa tcgagtagtc gttgccgcga cgcaattcga gggttacttc
    10381 gccggtaatg gctttggcaa cccagcgttg ggcggtttcg cgcaacatca gggcttggct
    10441 gtcgaaccag cggccttggt agagcaaacg tccgaggcgc aggccgttga tgcggtattg
    10501 ttcgatggtg tcttcgttgt ggataccggt caccaaacgc tcgtaggcga tgtggaacaa
    10561 cgccattccc ggggcttcgt agatgccgcg cgatttggct tcgatgatgc ggttttcgat
    10621 ttggtcgctc atacccagac cgtggcggcc gccgatgcgg ttggcttcga ggaagagttc
    10681 gacgggatca gcgtattctt tgccgttcag tgcaaccggc acgccttctt caaagcgcac
    10741 gctgacttct tcgggtttga tttcgacgtt ttcgtcccag aaggcaacgc ccataatagg
    10801 tttgacgatt ttgatgcccg agttcaaaaa ttccaaatct ttggcttcgt gggtcgcgcc
    10861 gagcatattg gaatcggtgg aataggcttt ttccaccgac attttgtagt tgaaaccgtt
    10921 ggcaatcaaa aattcgctca tttcatgacg gccgccgagt tcgtcgataa attgctggtc
    10981 gagccagggt ttgtagattt tcagcgcggg attggtgagc aaaccgtagc ggtagaaacg
    11041 ctcgatgtcg ttgcctttgt aggtgctgcc gtcgccccaa atattcacat cgtcttcttt
    11101 catggcggaa acaagcatag tgccggttac ggcgcgaccc agaggcgtgg tgttgaagta
    11161 ggcgatgccg ccggtggaaa cgtggaacgc gccgcattgg atggcggcga tgccttcgtg
    11221 tgccagctgt gtgcggcagt caatcaggcg ggcgttttcc gcaccgtatt ccattgcttt
    11281 tttgggaatg gcattgtagt cgtcttcgtc gggctggccg aggttggcag tgtaggcata
    11341 aggtagcgcg cctttgagtt tcatccacaa cagcgcggca gaggtatcaa gaccgccgga
    11401 gaaggcgatg ccgactttct gaccgacggg gaggttttgt aaaatagtat ggttttggct
    11461 cataagggta tccttcggac ttggaaaaag gagttcgtcg tgtttccttt tcgattgaaa
    11521 ccccgccact tggacatctg tccttcgggg cggtagaatc agactttatt tgggaggggc
    11581 gtaatccctt ccaaatcagg acggcacata gggcggtgct ttatgtgtcg tcccgtgtgt
    11641 tgaaacatta tcttataaat ataacccatt gtcagccgtt aaggctgtct gaaaagaagc
    11701 tttgcccgtt tcgctgaaaa tcttttcaga cggtctttac gccatcctca acctgactcc
    11761 ctcccctgcg ggggagggtt ggggagaggg tgcagacagc agcccttaag caaacgctgc
    11821 ctgaaaaacg caagctcgac cctctcccta accctctccc atgggagagg gaacaaatca
    11881 cagcaccatc gacattttca gacggcatcg gtaaagaaac ccatctatga acgcgttcaa
    11941 cctcaccatc atcggcgacg aaatcttaca cggcagccgc caagacaagc atttcgcctt
    12001 tttcaaatcc ctgctcgaat ccaaagggct gaagctcaat caggtgcaat atctgcccga
    12061 cgaacccgat ttgctggtca ggcaactgcg ccgcagcttt tcagacggca taccgacgtt
    12121 tgttaccggc ggcatcggcg ccacgcccga cgaccacacg cgccaagccg cagcggctgc
    12181 tttggatttg cctgtcgtcc gccatcctga agccgccaag tttatcgaag gcgtaacccg
    12241 gaaacgcggt gagccgctcg attcgcccga acacgcccaa cgcctgaaga tggcggattt
    12301 tccccaaggc gcggaattgg tgcctaatcc gtttaataat atcgccggat tttccattcg
    12361 cgagcattat ttcttccctg gttttcctgt gatggcgcac ccgatggcgg aatgggtttt
    12421 ggatacttat tacgtcggcc gcttcaacca aaccaaacgc ggcagccgca gcgtgtatgt
    12481 gtttgagcag cccgaatcgc gcattacgcc gcttatggag catatcgagc aaacttatcc
    12541 cggtgtgcgt tcgtacagcc tgcccagcgt cggttggacg cattcagacg gcacgcaggt
    12601 caaaccgcac attgagttcg gcatcaaagc cgaaggagaa gccgtcaacc ttttggacgc
    12661 ggcgtgggcg gaagtgttgc acagcttgga cggattggga gcagagctga aaaatcgggt
    12721 aaactgaaaa ccgtttgccc aaatcggacg atatttaagg aaaaccatgc aataccgaat
    12781 cagaagagaa aacgaagcac ccgaagcaaa aaatacgggg gaaaccttat gggagcgcga
    12841 catcatgcgc gaagtgctgc tgtccgccta tcaggacagg cgcagggagc ggatgtggaa
    12901 aaacatctgg cgtgccgtca gcaccctgat tctggttgcc ctgattgcag gcattttccg
    12961 aaaagacgaa gccgcattgc agttggcggg caacacgccg cataccgcag tcgtcaacct
    13021 gtacggcgaa atcggcaacg gtgtagaaga ccaggtcaaa aaactcaaag acggtatgga
    13081 ggccgcctac aaaaacccgc aggcaaaagc catcgtcatc cgcgccaaca gccccggcgg
    13141 ttcgcccgtc gtctccaaca ccgcttttga agaaatacgc cgtctgaagg cgcagcaccc
    13201 cggcattccc gtttatctcg tggcggaaga tatgtgcgcg tccggctgct actacatcgc
    13261 ggcggcggcg gacaaaatct atgccgaccc gtccagcatc gtcggcagca tcggcgttat
    13321 cggcagcagt ttcgacgcga ccggcctgat ggaaaaaatc ggcgtgaaac gcagggttaa
    13381 aattgcaggc agcaacaaag gcatgggcga tccgttttcg cccgaaacgc ccgaacagtc
    13441 gaaaatctgg gaagaaatgc tgaccggcat acacggcgaa ttcatcaaag ccgtcaaaac
    13501 cggacggggc ggccgcctca aattccgaca atatcccgac gtgttcagcg gtcgcgtgta
    13561 cacaggcgcg gatgcgctga aagtcgggct ggtggacgga ctcggcaata tttacagcgt
    13621 ggcgcgagac gtggtcaaag cccccgatgt ggtggattac actccgaagg acgatttcgg
    13681 cagaatcttg ggcagacgct tcggcgcaga actcaaagca agcgtgcgcg aagccctgca
    13741 ggccgtccgg tagcgttgtt tacagtattt ctaagggaat accaaaataa aaatatacac
    13801 aaaaacactc acctccccag tatgctgcca ctaagtcagc cgcgtcacta tttaccgtgc
    13861 acttaaagcc gtaaaaggca ggttgtcccc gggaggtttt gtgcatcctg ataccgatcg
    13921 gttgttgttg ctcaaaggac agaaggccgc tgataaacga gattacctgt ttgtcgctat
    13981 tgacgatttt tatactctgc cattttgcta gacaaaaccg cagacagtgc tgccaagttt
    14041 ctgaccgaac atctggccga cccctgcttg tacctgattg agtacgttta ctctgacaat
    14101 gataggtaat ataaagagcc gtccaacatg ctttcggtgc agcttgttat aataatggga
    14161 ttggttggag gcttgcccga tttgcttgtc cgcagaccaa cggtaaggcg gagcgggtta
    14221 tccgtacctt gatggagatg tggcatgagg aacagtcgtt tgacagtccg gaacatcggc
    14281 aaaaggagtt gtgctgcttt attaatttag gggctaccct agatcactag ggaaattcaa
    14341 attaagttag aattatccct atgagagaaa gtcgtctaag ccggtataaa caaaataaac
    14401 tcattttgtt atcgtggcta tgatgtattg gatgcgggcg aatttagcca tttccgtatc
    14461 aatcacagca cacattttgc cgaacgacaa aaccatatta atggaactga gaacttttgg
    14521 aatcaagcaa aacgtcattt acgcaagttt aacggcattc ccaaagcgca ttttgagctg
    14581 tatttaaagg agcgcgaatg gcgttttaac aacagtgaaa taaaagttct tgttccattt
    14641 taaaacaatt agtaaaatcg agtttatcct agttgtccag ggcagcctca tctctttata
    14701 gatagctgct taccaagtat ccttaattgc taattcaagc caatcttcaa aactattaaa
    14761 aaattcatgg ttttctatat tatctaaatt aatgacaata accctagaat ttcctgttac
    14821 atcattacca tcaaaataag cttcccattc tccattacta gcgaatggga taagatttaa
    14881 atcaggcagg atagaatttc taaatatata agctacttct gccccttctg ttccataatt
    14941 ctcaaaccac cagtgaaaat tatgtggctg aatataaggt attaaagatg tatcgttaga
    15001 gatacgaaca tacttttcag gataacaaaa cctttcagga agcatattac taggatataa
    15061 attaaattca ttttaaataa tcatttcgtt accttaggat cataaatact accattagga
    15121 aactgggtag accaatttgg tggtgctagt tcattttcaa tttgtttttt aattctaaat
    15181 tgaatagctt ctccccatgt ttgcggcatc taatgctgct tgctctgcat caatattact
    15241 aaaaattgga ttagtctcaa aaatgaaaaa ttactgtttt ttcatttttt atagcatatt
    15301 caagtatatg aataatattt ttcactaagg gctctgtaga aaaatctgaa ttttgtaatt
    15361 tttcttttac agccaaaata ctttccttat ctattagcca atccccctca cttggtccaa
    15421 ataaccaatt atcggtaatt tcagaaacaa gtctccataa tccacgattt tgatattcaa
    15481 taatttgact ttccgtaatt tctacaactg tttcagattg aatgttttta taagcccaat
    15541 caatcatttc agtatattca ctaattgaaa cattgtcttt taaacagaaa attaacaggt
    15601 tgtgttcatt catttgtcta agttcttaat atgagtttgt tgttgtaaat aatcttttgc
    15661 ttgcttacct tgtaaattaa aggattaacc gcaccttgga tgatgccgcg aatatcatcc
    15721 atacggttac cccaccaaat tttattggtg tatcgttaat catttatttc aaaaaagtta
    15781 tttattatca tattatcagg gagcaggtcg ttaaaaaaaa ccccctcaaa ttccattaaa
    15841 ttagtattta tccagcacat aaacgaacca aagcgttctt tccctgagtg taaatattta
    15901 aaattaaact caaaataagt ttttttgctt agaaaattta atggtttttc tatagtgaaa
    15961 aaaaagccct tactcgtttt agttcgagat actattttaa ataaattttt attttcaata
    16021 aaataagaat attcatttac taagttgtta tgataaaaaa gtaattttat taaaatgttt
    16081 tcataatttt ctaggttcat ttctagctca atttaaaatg atttcattgt tgccgtacca
    16141 atgcgaaatt taccatcaac aaaatttccc ttcactgata caggtacgcc atcaacttgg
    16201 gtagttttat tttcaggctg cctgaaagaa agataggcaa cttattactc atcttacgct
    16261 agccctcaat aattgaatac gttgcactag aaccaattat ttctatgaat gtttgctcaa
    16321 acataaaaat atagtattta aagaattctc tattcaaagg aaaataactt tctttcaata
    16381 tccattccgc ataacactca tcaagaagtt caaaaaagat tgaccaccat tttcatgaag
    16441 caaagctcta tctgcatctt ccgaaattaa atccataaaa gtatctataa aatacgattc
    16501 atcaacaacc ctaaaatgaa taacatcttc aataaaaatt tttatggttt tatccgtatt
    16561 tctataacca actgctataa cttctacttt atcagagttt attgctgcat tatcaaaata
    16621 gaaatagcca gttgggaaat ctaagctttt taatttcata atttatcgtg tatttccata
    16681 tctgattttt atttttcggt tattactaat tgttatttca agtgttggtt ctccaccact
    16741 actatcatta cgagcattaa ccgcacgcct atcaggtaaa ttgcccgtta tcgttccatt
    16801 aggacgtgtt tgtacatttc gaacattcag actattaaaa tcatttagtg cgtcattgta
    16861 atcccccact ttatcatact gaacagcggg accttttgtt ttactccttt gagtagtatt
    16921 gctcaaaatg tctttgattt gtaaatcact gcgcacctta ccggtttcta tgcgagctgc
    16981 cacactactc gggctatagg ggtcgctatc aatcgcagga ttaccaccgc tggttttttg
    17041 tccgctagcc tgtttcccaa cctgctgtac tgtatcgcca atttcatcta ccgtacctaa
    17101 cgccttagtc tgcatatggc gaacagcagg ttttttatag ccggtatttt taacccaatc
    17161 ccatttagtc gggttaagtt ctactttttt acctctccaa accgtacctg cggcctctgc
    17221 tacggaaagg gcagtttggg ctgttgcagt tatattcgga tgggcatcag cccattgtct
    17281 ggcagagttg atactgtctt ttaccgcaaa agcactgtct tgtaatgcgg ttgcggccgc
    17341 aagttgtgct tcgggactta aatttcctaa attattaata ccttgtagag tctgctgcgc
    17401 agagatgtag caactgtatt tttaccccgt cgggtaaaaa tacagttgct acggctgctg
    17461 ggaaagcagt tactattttc ccagtggctc aaaattaatt gtttcagcag atatttttat
    17521 aataatccct acatcaataa taatttcact ataaaattgg tatttatata gctctatttc
    17581 gggtataaac aagggaaaca agctatcttc cttatcctca taatctacga aattatttgt
    17641 atctaattta aaattcaaaa tattactgca tttgatatat ccgaaataat taccttcaat
    17701 tgtatctgta aaagataatg taagggtatt tccattatcg gaaaagatta tttcataaag
    17761 gcttacattg tgaaaaatat tttttttcat ttgacaaaat atccagaatg atgacgatta
    17821 tttggcaatg gattgccttc ataatcttgt cgttgcggat attttccctg tacaccatcg
    17881 gttcgcggca ctctttgggt tcttataacc tctccatttg gacgaatatc tattttcacg
    17941 ccatcaggac ctttccatgt ttcatattga gcctcatctg aaccagtacg tctaaaacct
    18001 tgttcttgca atgcttgacg taattcatct cgcgtagttg gtctgataga tttaacaact
    18061 ggcttgtttc ctcctgccat ctcaccgtcc aacgtctgca taggtcgggc agcaggtttt
    18121 ttatagccgg tatttttaac ccaatcccat ttggtcgggt taaggtttac ttttttaccg
    18181 ccccaaaccg tacctgcggc ctctgctatg gcaagagcag tttgggctgt tgcagttata
    18241 ttcggatggg catcagccca ttgtctggcg gaattgatgc tgtcttttac cgcaaaagca
    18301 ctgtcctgta ataggctcgc ggcagcaagt tgtgcttctg gacttaattt tcctaaatca
    18361 ttaatacctt gtagagtctg ctgagcggct gtatctgagc cggtcagtgt aggttggatt
    18421 aaaacccagc attttcaaca tcttgatgtt ttactataaa tctattcttg tgcttccttt
    18481 gttagataaa tttcaacaca aaagatacgt atgcattctc taattttatt tgagataaat
    18541 aatgcattgc tttgtcgata ctgttaaata aattacttcc ctcgtaatac caattatcat
    18601 atgtttgata aaaataatta tctttcttga tataaatatc tccccccaat acaagtattc
    18661 tctcattgat aaataaattt aatatatcta ttgcaatagg gacgggtaat gcggcttctc
    18721 taattccaat tcctatcaaa gattcccctt gtctcgaata aatttcaaaa atttcattta
    18781 acatgttaat ctctatctac tatttttcaa tcggtataaa ccctattcac attttatttt
    18841 tcctaaaacc aaatcttcga ctaactgggt tgcataaata atatcattta tgattttaac
    18901 aggtaaatta tttgataggt aaccatggga ttccgtcatc attgatttct ctaggtgctt
    18961 atttatctga ttggtaagcc ttttgcgtaa gcttctttcg cctccgcaag tgtcatttca
    19021 ttaggtccac catctatatt agtttctcct gtattttgcc actgacaaac gtcacagata
    19081 tcatagtcca taacttcagt tccgcaaaca ggacaatgta gccatatttc tccgtcaatt
    19141 tcccatgtct tttttgaatt ctccatcata atacttcttt cctaagtttg gtttaaacat
    19201 tgttttgatt ttgaatgttt ttggattggc caaaacatag atattgttat tgatatcata
    19261 gcgcactcgt ctatgttccg tctgataacc taatatcttg tccgatgtct gttttgataa
    19321 caaatcagac gccatttttt ggtagtcttc aatggttata tcgccaaatt cttttccatg
    19381 agctttgaaa tgtccattta aagatttctc agtaggaaac ttggactttg tccatctgat
    19441 gcggtcttga attgttcctg tcggagaaat agatgtatca ggtttaacat atgaggcagg
    19501 taagccgata ttgttatcag agtgtgtagg gtgttgctgc gtacttggtt ttggtggctt
    19561 attcccacct gccatctccc catctaaagt ctgcataggg cgggcagtag gtgttttata
    19621 gccggtattt ttaacccaat cccatttggt cgggttaagt tctacttttt taccgcccca
    19681 aaccgtacct gcggcctctg ctatggcaag ggcggtttgg gcagtagctg taatgttcgg
    19741 atgggcatca gcccattgtc tggcggaatt gataccgtct tttaccgcaa aagtactgtc
    19801 ctataatgcg cttgcggcag caagttgtgc tttcggactt aaatttccta aatcattaat
    19861 accttgtaaa gtttgctgcg cagagatgta ggtcggatat ttgtatccga caaaaatatt
    19921 tgacgcatct atcgtttccg aaatgccgct gttggaaaat gtcggattcg agaatccgac
    19981 ctacggctat ttcgtttaag tcataaatag ccattcatgt tccttctgaa tttgcttttg
    20041 ctatccttag aaccaatcat ataaacatta tcatcattaa ttaatgttct aagtttatga
    20101 agcggtcaaa tctgtcaaac taccagagat gaagcatatc ctcctggaag taattctgtt
    20161 cgtgctgttt ccatatcttc tttgccatca tcagttactt ctctgtctaa ataaaatctt
    20221 acgataagtt tttgtctaat ttcatcaaat tctgccgtaa ttaatcttat attgatatga
    20281 atacacggtt catacctgct attagccagt caggtgtagt tggatgggga ttcattttta
    20341 ataatatctt caagcaagtg aaatgtaaga aaagcgtaga tacttgaagg ccggctatct
    20401 gattggcaaa aagaaatttc ggagataaag aatttccgtt tatatttttc ataaattaaa
    20461 tcaacacctt gttttacata aaaactaact tcctcaggaa ggatatttat aacattctct
    20521 ccttttactt ttatagttaa tggtttgatt tttatgtttt catgaatatc tgataggatt
    20581 atttctaaaa aattattttt atttccagtc attctggcta ttttatgtat atttccattg
    20641 tgttcgatta tcattttatt ttttccaagg atttccttct atattgatag tttatctaaa
    20701 gatttcattt aaaatatcct gactaatttc ttgtttatat aattctacaa ttttctgttt
    20761 ctgtgtattt gtataaaatt tttcgttggt atctgcttga tattttaatt gtctcaatat
    20821 ttccatgatt tcatattctg atttttcatc atattcttca atcatgtaat caacaaattg
    20881 ttttagaata tcaaaggctt cgtaactttc caaaatttta atatgtttat cggcaaaatt
    20941 ggacatatac cattcgtcag tgattggatt agtatttaaa tcatctaaaa aaacatttaa
    21001 atcatctaaa aaaacattta catcatctaa aaacatgact aatccttaaa cttaaaatct
    21061 gttttctcac cggttcttga gttttcaatg taatgtattt caattttgtt tacgttttga
    21121 acacgcttaa cccaaccgtc ttttgctaac caaccatttt tagtatcgga cataggaggt
    21181 attctcgcag gagttttgcc ctgtgggttt gccttaactt cttccattgc taattgttcc
    21241 tttaaattat taggtattgt acgaccggtt gatttttcaa cagattgtgt ccctattttt
    21301 aatgatttgt ttcccccagc catttcccca tctaaagtct gcatagggcg ggcagcaggt
    21361 tttttataac cggtattttt aacccaatcc catttggtcg ggttaaggtt tactttttta
    21421 ccgccccaaa ccgtacctgc ggcctctgct atggcaagag cagtttgggc tgttgcagtt
    21481 atattcggat gggcatcagc ccattgtctg gcggaattaa tgccgtcttt taccgcaaaa
    21541 gcactgtcct gtaataggct cgcggcagca agttgtgctt ccggacttaa atttcctaat
    21601 tca
//
LOCUS       DAWEYF010000018        21050 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.018, whole genome shotgun sequence.
ACCESSION   DAWEYF010000018 DAWEYF010000000
VERSION     DAWEYF010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.018"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            208..1329
                     /gene="dnaJ"
                     /locus_tag="WGN93_000476"
     CDS             208..1329
                     /gene="dnaJ"
                     /locus_tag="WGN93_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ0226421.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGEPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1525..3543
                     /locus_tag="WGN93_000477"
     CDS             1525..3543
                     /locus_tag="WGN93_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ0226422.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(3587..4144)
                     /gene="rfbC"
                     /locus_tag="WGN93_000478"
     CDS             complement(3587..4144)
                     /gene="rfbC"
                     /locus_tag="WGN93_000478"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ0226423.1"
                     /translation="MNIIDTALPDVKILKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PLLSPKDLAGKAWAQAEKLRLTLSR"
     gene            complement(4189..5079)
                     /gene="rfbA"
                     /locus_tag="WGN93_000479"
     CDS             complement(4189..5079)
                     /gene="rfbA"
                     /locus_tag="WGN93_000479"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ0226424.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENF
                     RAVSIEEKPQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSL
                     SVQILGRGFAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVET
                     RAKPLEKTAYGQYLLRLIGK"
     gene            complement(5276..6358)
                     /gene="rfbB"
                     /locus_tag="WGN93_000480"
     CDS             complement(5276..6358)
                     /gene="rfbB"
                     /locus_tag="WGN93_000480"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ0226425.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLGGTDDLFTETAPYA
                     PSSPYAASKASSDHLVRAWQRTYGLPAIVSNCSNNYGPRQFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE
                     ELAPEKPAGVARYEDLITFVPDRPGHDVRYAVDAAKIGRELGWKPQETFESGIRKTMQ
                     WYLDNKTWWQNVLNGSYRLERLGTGK"
     gene            complement(6359..7402)
                     /gene="galE"
                     /locus_tag="WGN93_000481"
                     /pseudo
     CDS             complement(6359..7402)
                     /gene="galE"
                     /locus_tag="WGN93_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223275.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(7395..8397)
                     /gene="dcm"
                     /locus_tag="WGN93_000482"
                     /pseudo
     CDS             complement(7395..8397)
                     /gene="dcm"
                     /locus_tag="WGN93_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
     gene            complement(8428..10701)
                     /locus_tag="WGN93_000483"
     CDS             complement(8428..10701)
                     /locus_tag="WGN93_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ0226426.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPVRTMPGHRA
                     LAVLRGRNEGVLNIALKYRPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYKNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(10766..11416)
                     /locus_tag="WGN93_000484"
     CDS             complement(10766..11416)
                     /locus_tag="WGN93_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226427.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(11413..12210)
                     /locus_tag="WGN93_000485"
     CDS             complement(11413..12210)
                     /locus_tag="WGN93_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ0226428.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGDSVTTYENPWYILLCNLVLLLLGLAVVARFSKGVEPQ"
     gene            complement(12210..13373)
                     /gene="ctrB"
                     /locus_tag="WGN93_000486"
     CDS             complement(12210..13373)
                     /gene="ctrB"
                     /locus_tag="WGN93_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ0226429.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(13388..14563)
                     /gene="ctrA"
                     /locus_tag="WGN93_000487"
     CDS             complement(13388..14563)
                     /gene="ctrA"
                     /locus_tag="WGN93_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ0226430.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            14698..15831
                     /gene="neuC"
                     /locus_tag="WGN93_000488"
     CDS             14698..15831
                     /gene="neuC"
                     /locus_tag="WGN93_000488"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ0226431.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKCQSEKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            15835..16521
                     /gene="neuA"
                     /locus_tag="WGN93_000489"
     CDS             15835..16521
                     /gene="neuA"
                     /locus_tag="WGN93_000489"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ0226432.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            16522..17571
                     /gene="siaC"
                     /locus_tag="WGN93_000490"
     CDS             16522..17571
                     /gene="siaC"
                     /locus_tag="WGN93_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ0226433.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            17723..20836
                     /locus_tag="WGN93_000491"
     CDS             17723..20836
                     /locus_tag="WGN93_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ0226434.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLYPPFHLHPNVKTSSIIDLFNDIPENVSCRNTPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSAEDSIIFTHPLQLEMYRLANNDIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDDEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSESEGFPYIFMEGMVYDIPIVVYDFKYGAND
                     YSNYNENGCVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKSSLVTINKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKSPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
BASE COUNT         5673 a         4798 c         4816 g         5763 t
ORIGIN      
        1 ataacaaaaa cacttcatgg cgggttggtt ttatgcctgt ctaagttttt gtgtcgtgca
       61 tacctgaaaa tttcagacgg catcggttta tgctgtctga aaagtgtatt ccgtttcagt
      121 ttgtaagcta tggcagtctg tttgtcttgt gttttgcgca attgccctta ttttgagccg
      181 tgattttatt ttgaattaga tgaaaaaatg agtaatcaag atttttatgc gacgctgggt
      241 gtggcaagaa cagctaccga tgatgagatt aaaaaagcct accggaaatt ggcgatgaaa
      301 taccatcccg accgcaatcc tgacaataaa gaggcggaag agaagtttaa agaagtacaa
      361 aaggcgtatg aaactttgtc cgacaaggaa aagcgcgcta tgtacgacca gtatggtcat
      421 gcggcgtttg aaggcggcgg acaggggggc ttcggagggt ttggcggatt tggcggtgcg
      481 cagggttttg actttgggga tattttcagc caaatgtttg gaggcggttc ggggcgcgcc
      541 cagcctgatt atcagggtga ggacgttcaa gtcggtatcg aaatcacgct tgaagaagcc
      601 gcaaaaggtg tgaagaaacg catcaatatt ccgacttatg aagcgtgtga tgtctgtaac
      661 ggcagtggcg cgaaaccggg gacatccccg gaaacctgcc cgacttgcaa aggttcgggt
      721 acggtgcaca tccagcaggc gattttccgt atgcagcaga cttgtccgac ctgccacggt
      781 gcgggcaaac acattaaaga accttgcgtc aaatgccgtg gcgcggggcg gaataaggcg
      841 gtcaagacgg tggaagtcaa tattcccgcc ggtatcgatg acgggcagcg tatccgtttg
      901 agcggcgaag gcgagccggg tatgcacggt gcgcctgccg gcgacctgta tgtaaccgtc
      961 cgcattcggg cgcataagat tttccaacgc gacggtctgg acttgcattg cgaactgccg
     1021 atcagttttg ccacggctgc tttgggcggg gagttggaag tgccgacctt ggacggaaag
     1081 gtcaagctca ccgtccccaa agaaacccaa accggcagga ggatgcgcgt gaagggtaag
     1141 ggtgtcaaat ctttacgcag cagcgcgacc ggcgatttgt actgccatat tgttgtcgaa
     1201 acgcctgtca atttgaccga ccgtcaaaaa gagcttttgg aagaatttga gcggatttct
     1261 accggcttgg aaaaccaaac accgcgcaag aaatcgtttt tagacaagct gcgcgatttg
     1321 tttgattgat tttaaggttc ggaaacaagc agccgtatcg gggaatctcc ctgatacggc
     1381 tgtttttgtt tgtttaaaaa tagtttttat tttcaatggg gtatggggca gggtgggata
     1441 actgttttta actgttcttt ttaaaacttg acatcatggc gcgatgccaa caatatgtga
     1501 acgtctgttg tcaaaggaag aataatgaat aaatctttat ccgggtcggt agaagaatac
     1561 cgcgaactga cgctccgagg catgatactc ggtgcattga tcactgtaat ttttactgcg
     1621 tccaacgttt acctcggttt gaaagtcggg ctgacctttg cctcgtcgat tccggcggcg
     1681 gtgatttcga tggcggtttt aaagtttttc aaaggcagca atattttgga aaacaacatg
     1741 gtgcagaccc aagcttcggc ggcgggtacg ctttcgacca tcatcttcgt cctgcccggt
     1801 ttgctgatgg cgggctactg gagcggtttc ccgttctggc agacgacgct tttatgtatt
     1861 gccggcggga ttttgggggt gattttcacc attccgctgc gttacgcgat ggtggtgaaa
     1921 agcgatttgc cttatccgga aggtgtggcg gctgctgaaa ttttgaaagt gggcggtcat
     1981 gaagaagggg ataaccgtca gggcggcagc ggcatcaaag agctggcggc cggcggtgcg
     2041 ttggcgggat tgatgagctt ttgcgccgga ggtctgcgcg tgattgccga cagcgcgagt
     2101 tattggttta aaagcggtac ggcgattttc cagctgccga tgggcttttc actggcattg
     2161 ttgggcgcgg gctatttggt cggactgacg ggcggtatcg ccatcctgtt gggcatttcg
     2221 attgcttggg gcattgccgt gccgtatttc tcctcacaca ttccgcaacc ttccgatatg
     2281 gaaatggcgg cgtttgcgat gaagctgtgg aaggagaaag tgcgttttat cggtgcgggg
     2341 actattggca ttgcggcggt ttggacgctg ttgatgctgc tcaagccgat ggtggaaggc
     2401 atgaagatgt cgttcaagag ttttggcggc ggtgcgcccg ctgcggaacg cgccgaacag
     2461 gatttgtcgc ctaaggctat gattttttgg gtgctggcga tgatgtttgt tttaggcgtg
     2521 tcgttttacc actttatcgg cgattcgcac attacgggcg gcatggcttg gcttttggtg
     2581 gtcgtttgca cgcttttggc ttccgtcatc ggctttttgg tcgccgccgc ctgcggttat
     2641 atggcaggtt tggtcggctc gtcttccagc ccgatttccg gcgtgggcat cgtgtccgtc
     2701 gtcgttattt cactggtttt gctgctggta ggcgaatccg gaggtttgtt ggcggatgag
     2761 gctaaccgca aatttttgct ggcactgact ttgttttgcg gctcggcagt aatctgcgtg
     2821 gcttcgattt ccaatgacaa cctgcaagac ttgaaaaccg gctacctgct caaagccacg
     2881 ccttggcggc agcaagtcgc cctgattatc ggctgtatcg ttggtgcgct ggttatttcg
     2941 cccgtgttgg aactgcttta cgaagcctac ggctttaccg gcgcaatgcc gcgcgaaggc
     3001 atggatgcgg cgcaggcttt ggcagcccct caagcgactt tgatgacgac catcgcgtcg
     3061 ggcattttcg cccacaacct cgaatgggtc tacatcttta ccggcatcgc gattggcgcg
     3121 gtgttgattg ccgccgattt ggtgttgaaa aaatcatcag gcggcaaact tgccctgccc
     3181 gtccttgcgg tcggtatggg tatttatctg ccgccgtccg tcaatatgcc catcgtggca
     3241 ggcgcggtgt tggcggcggt gttgaaacac atcatcggta aaaaagcgga aaaccgtgaa
     3301 ggccgtctga aaaacgccga gcgcatcgga accttgttct ccgccggcct gattgtcggt
     3361 gaaagcctga tcggtgtgat tatggcgttt attattgcct tctccgtgac caacggcggc
     3421 tcggatgcgc cgcttgcgtt gaatctgcaa aactgggatg ccgccgcctc atggttgggc
     3481 ttggcgttct tcgttaccgg gatgtttttc tttgcacagc gcgtactgaa ggcgggtagg
     3541 tagcctgtcg gaaaaaatgc cgtctgaaac gttcagacgg cattttttat cgggaaagcg
     3601 taaggcggag cttttcggct tgcgcccacg ctttaccggc aagatctttg ggcgacagca
     3661 gcggcgcggt ttgaagcggc cagcctatgc cgactgtcgg gtcgttccat attaaaacct
     3721 gttcggcttc aggcttgtaa tagtccgtgc atttgtacac gacttccgct gcgtcgccca
     3781 aaacgcaaaa cccgtgcgcg aagccttcgg gtatccaaag ctggcattgg ttttgcgcgg
     3841 acagggttgc gcccgcccat ttgccgaaag tcggcgaacc ttcgcgcata tcgacggcca
     3901 cgtcgaacac ttcgccgaca actacgcgta cgagtttgcc ttgtgtgttt tcggtttggt
     3961 agtgcaggcc gcgcaatacg cctttgccgg atttggagtg gttttcctgc acaaaggttc
     4021 ggtcggcaat attttctttg aaccacccgt cgcggaaggt ttccataaaa aagccgcgcc
     4081 cgtctgtgaa gacttgcggt tttaaaattt ttacgtcggg gagggcggtg tcgatgatgt
     4141 tcatgatttt ctctgtatgc cgtctgaaga aagtggttca gacggcattt atttgccgat
     4201 taggcgcagc aggtattgcc cgtaggcggt tttttccaaa ggctttgccc gtgtttccac
     4261 atcttttttc gtcagccaac cgttgcgcca ggcgatttct tcgaggcagg cgatgtgcag
     4321 gttttggata ttttgcacgg tttggacgaa tgaagcggct tcgtgcaggc tctcgtgggt
     4381 gccggtgtcc aaccatgcga aaccgcgtcc taatatttgg acggacaatg aaccgtcttc
     4441 caaatacatt tggttgaggt cggaaatttc caattcgccg cgtgcggacg gtttgagctg
     4501 tttggcgaac tcgacggcgc ggttgtcgta gaaatacaag ccggttaccg cccaatcgga
     4561 tttgggccgt tgcggttttt cttcgatgga aacggcgcgg aagttttcgt taaattcaac
     4621 cacgccgaaa cgttcggggt ttttgacctg ataagcaaac acggttgcgc cgtgcgtttg
     4681 cgctgccgcc tgtttcaatg tttgcgctgc cgcctgtttc aatgtttgcg taaacgactg
     4741 accgtaaaaa atattgtcgc ccaaaaccaa gcaaacattg tcgttgccga taaattcttc
     4801 gccgatgata aatgcctgtg ccaagccgtc cggactgggt tgcacggcat aactgatgga
     4861 aatgccgaaa tcgctgccgt cgccaagcag gcgtttgaaa gaggcgttgt cttcaggcgc
     4921 ggtaatcacc aaaatatcgc ggattcctgc cagcatcaaa accgacaagg ggtaataaat
     4981 catcggtttg tcgtacacgg gcaggagctg tttggatacg ccgcgcgtga tggggtagag
     5041 gcgcgtgccg ctgccgccgg caaggatgat gcctttcatc gtatttcctt ttcggttgaa
     5101 accccgccct ttagggcggt agaatcagac tttatttggg agggggtaac cccttccaaa
     5161 tcaggacggc acatagggcg acgctttatg tgccgtcctg tgtgttgaaa catcttttct
     5221 ttcttccttt gcgataggtt ttcagacggc attgcgtcgg gatgccgtct gaaaactatt
     5281 tgcccgtacc taaacgttct agacgatagc taccgttcaa tacattttgc caccaggttt
     5341 tgttgtccaa ataccattgc attgttttgc ggatgccgga ttcgaatgtt tcttgaggtt
     5401 tccagcccag ctccctaccg attttggctg cgtcgacggc gtagcgcaca tcgtggccgg
     5461 ggcggtctgg gacaaaggta atcaaatctt cataccgtgc cacaccggcc ggtttttcgg
     5521 gagcgagttc ttccagcagg gcgcagatgg ttttgacgac ttcaatattg gctttttcat
     5581 tgtggccgcc gatattgtag gtttcgccga caacaccttc ggtaacaacc tgatacagtg
     5641 cgcgcgcgtg gtcttcgaca aacagccagt cgcggatttg cataccgtcg ccgtaaacgg
     5701 gcagcggttt gccgtcgagc gcgttcagaa tcatcagcgg gatgagtttt tcggggaatt
     5761 gtcggggccc gtaattattg gaacagttgc tgacaatggc gggcagcccg taagtccgtt
     5821 gccacgcgcg gacaagatga tcggaagatg ctttagacgc ggcataagga ctggacggcg
     5881 cgtatggcgc ggtttcggta aacaaatcgt ccgtgccgcc taaatcgcca tagacttcat
     5941 cggtggaaat atggtggaaa cggaaggctt cgcgcttttc agacggcatt tgttgccagt
     6001 aggcgcgggc tgcttcaagc agattgaatg tgccgacgat attggtttgg ataaactcgc
     6061 ctgccgaacc gatagagcgg tcgacatggc tttccgccgc caagtgcatc acggcatcgg
     6121 gccggtgttg tgcgaatacg cggtcgagtt cggcgcggtc gcaaatgtcc acttgctcga
     6181 aagcatagcg gggattatcg gcaatgtcgg tcagcgattc gagattgccc gcgtaggtca
     6241 gtttgtcgag gttgacgacg gaatcttggg tgttttgaat gatatggcgg acaacggcag
     6301 agccgataaa gcccgcgccg ccggtaacga ggatggtttt tttgtttgcg gtttgcattt
     6361 aatccccata tccgttgggg ttgcggctga cccaacgcca cgaatcctcc atcatttgcg
     6421 caaggctgcg tttggtttcc caacctgtct cttgtttggt atgggacggg tcggcaaagg
     6481 aacacgccaa gtctccggcg cgtcggggtt ggatttgata gggaatattt aagccggatg
     6541 cggcttcaaa ggcacggatg atttccaaaa ccgaataggc gcgccccgaa cccaagttga
     6601 acaaatgtac gccggcaaca ccgcctttcg ccttcattgc cgcgatatgc ccttctgcca
     6661 aatccatcac atgaatatag tcgcgcattc ccgtaccgtc cggggtcgga taatcgccgc
     6721 cgaataccga cagttgcggc agcctgcccg aagccacttg gcagatatag ggcaaaaggt
     6781 tgttgggaat accgttgggc tgttcaccga tcaagccgct ttcgtgcgcc ccaatcgggt
     6841 tgaaatagcg caacaaaatc acgctccaac gcggatcggc cttttggatg tcggttaaca
     6901 tccgttccac catcgctttg gatgcgccat aaggattagc ggtatcgccc gggcgcatat
     6961 cttccgtata gggcatttta cgtatcatgg cgcgacgcat taaagtaaac gccaaagcgc
     7021 gtttatactg gttatccagt ttccctatat ttttacgtta caaatcaagt tgttggtatt
     7081 catcgtgaaa atagaatttt tcggcataac gctgactcat aaaaccggca tgcgggctgc
     7141 ctgaaaaaat cattgcgaca tcatcgtcat ttaatgtttc atggttgttt tctattaatg
     7201 ctaaagcaat ttggtaatta attgccaaaa tatcgttagt aatcacacga tagccgcgtt
     7261 ttttggcttc gtaggcaaag gaacagcctc cactaaatac atctgcaact gtatctacat
     7321 cagacggaag ctggtcacaa atccaggaag ctattttctc tttattaccg atatagttaa
     7381 ttttcggata ttgcttattc attttcactc atttttaaaa tactttcagc aatagctttt
     7441 gccaataaag gcggtacggc gttaccaacc tgctgctgct gggcaatttt gctgccgcaa
     7501 aaaataaaat tatcagggaa agattgtaag gcagctaatt cacgaacggt taacgcccga
     7561 ttctgttcat agtgaaaaac tttgcgcata tctcctgtaa tacaaacggc tggttttgtt
     7621 gctgttgtaa cggatgtatt tacggatatc acctgttttc ggacgtaatg gttcaggaat
     7681 atcgttacgg ttacctccat ttttaacaaa tgccattttt tctaacattt gtgccgaatg
     7741 attcatagct tcatgatttg caacgtgtgg attgctttcg ccagcagcca gttttggaaa
     7801 atgtcctatt gctgatccaa cagtctgatg ggaaatctgc aaaggttcgg gaaaggaaat
     7861 tttgccttta tccctcctcc cgataaatat cactcggcta cgtatctgag gaacaccgaa
     7921 atcggctgca ctcagtatct tacattccac cgaataaccg atattctgaa atgcttgaat
     7981 aatctcaata cgtgttttac ctgaattgtg tgtatagagt cgcgctacat tttccataac
     8041 aaaaaaatat ggttggacaa ttttaactat tcggacaaac tctttaaata aatggttgcg
     8101 tgggtcatct gtaaatgtcc gtccaatctt tcctgccata ctaaaacctt gacaaggtgg
     8161 tcctccaata atcaaatcaa ctgcttgtcc gttaagacaa ttgattaaat cttgttcggt
     8221 tagtgtggtt aaatcttttt gcagtaattg atgatggggg aagttggtac ggtaagtctg
     8281 acaataatca gactccattt caacagaaag caattgttgg aatccggctt gttcaaaacc
     8341 caaggatagg cctcctgctc ctgagaaaag gtcaatatag gtaagtggtg tgtgcataag
     8401 tcaaaatcca taaactcttc gattatttta ccgcttcagc ttcgcaaacg catccgccat
     8461 cgccgaattg gctggggcgc ggtcgttgcg ttggggtttg cggccggctg tccgttcgcg
     8521 gctgcggttt tcagacggca ttttatgttt tgcgccgccc ggttcgtcat ccaagcgcat
     8581 ggtcagcgcg atgcgtttgc gtgcagcatc gacttccagc actttcactt tcaccacgtc
     8641 gccagctttc accacttcgc gcgggtcttg gacgaacttg ttggacaggg cggagatgtg
     8701 caccaagccg tcctgatgga cgccgatgtc cacgaacgcg ccgaagttgg cgacgttgga
     8761 aaccacgcct tcgagtatca taccgacttg caagtcgctg atttcgtgga taccttcggc
     8821 aaacgatgcc gtctgaaact cgccgcgcgg atcacggccg ggtttttcca gttcggacag
     8881 gatgtccaaa atggtcggca ggccgaagcg ttcgtcggtg aagtcggacg ctttgatttg
     8941 cttcacgcgc tcgcggttgc cgatgagttc ggcggcgcta atgccttgtt gcgccagcat
     9001 tttggcgacg acgggatagg cttcggggtg gacggcgctc gcgtccaacg gctctttgcc
     9061 gccgttaatc cgcaaaaagc ccgccgcctg ctcgaaggtt ttttcgccca aacgcggtac
     9121 tttcagcaat tttttgcggc tgtcgaacgc gccgttttca tcgcggtagg cgacaatgtt
     9181 ttgggcaagg gtttgattca aaccggaaat tcgcgccaag agcggggcgg aggcggtgtt
     9241 cacgtccacg ccgacggcgt tcacgcagtc ttcgaccacc gcgtccagcg atttggcgag
     9301 ctggctttgg ttcacgtcgt gctgatactg ccccacgccg atggatttgg ggtcgatttt
     9361 gaccaactcg gcaagcgggt cttgtagcct gcgggcgatg gacaccgcgc cgcgcaggga
     9421 aacgtccaag tcggggaact cgcgcgccgc cagttcggac gcggaataaa tcgacgcgcc
     9481 ggcttcggac acgacgattt tatgcagccc cattttcgac atttcacgca ccagttcgcc
     9541 cgcgattttg tcggtttcac ggctggcggt gccgttaccg atggcgatga gcttcacgcc
     9601 gtgctgttta atcaggcgcg acagcgttgc caacatattg ttttcttgat gcaaatagac
     9661 gatgacggta tccagcagct tgcccgtgtc gtccaccacg gcacatttca cgccgttctt
     9721 gtatccaggg tctagaccca aagtggtcag ccgtccggcg ggtgcggcga gcagcaagtc
     9781 tttgagattt cgggcaaaca cggtaatcgc gtcggtgtcg gcggcttctt tcaaacgatt
     9841 gagagcttcg agttccaacg acaaaaagat ttttgcgcgc caagtcagac gcacggtgtc
     9901 gcgcagccat ttgtggccgt ctgaaacctt gaaacggcgg gcgatgattt gctcgtattc
     9961 gctttgctgc gtaatcggcg tgtcgtcggg ccggtatttg agcgcgatgt tcaacacgcc
    10021 ttcgttgcgg ccgcgcaaaa ccgccaacgc gcggtggccg ggcatagtgc ggacgggttc
    10081 gcggtggtcg aaataatcgc tgaatttttc gccttcggtt tctttgcctc caacaacttg
    10141 cgcgtggatt tcggcttcgt tccacagctt gtcgcgcagc gtgccgatga gttccgcgtc
    10201 ttcggcaaac tgctccatca gaatcgcacg cgcgccgtcc aacgcggctt tggcatcggg
    10261 gacgttttcg ttcaggtagc cttgtgcggc ggcttccacg tcctgcgact gctcggcaag
    10321 caacacgtcc gccagcggct gcaaaccgtg ttcgcgcgcg atttgcgctt tggtgcggcg
    10381 tttgggtttg tagggcagat acaggtcttc cagcgcggtt ttgttatcgg cggcttcgat
    10441 ttgcgccctg aggtcgtctg aaagcttgcc ttgctcttca atgcttttta aaacaacggc
    10501 tttgcgctct tccaactcgc gcaggtattg cagccgctcg gcaagccggc gcagctgcgt
    10561 atcgtccaac ccgcccgtgg cttccttgcg gtagcgggcg ataaagggca cggttgcgcc
    10621 gtcgtccaaa agctcgatag cggcattgat ttgcgcggta gtcgcggaaa gttcttggga
    10681 aagaatttga gtaatgttca tcaataaaat tccaacggac aggccgtctg aaatttcaga
    10741 cggcctgatt taaaaaacaa tcgctttaag gtagcgaatt ataatattcg taggctttgt
    10801 ccatatcttc aaactggtgc atatgccctt tttccagcac catcgcatta tcgcaatatt
    10861 gcttcatggc gctgtggctg tgcgacacca agatgatgga acggtctttg cgcttttcaa
    10921 acaactcgta cttacattta tcggcaaaac gcgagtcacc aactgcaatc acttcgtcaa
    10981 tcaaatagca atcaaactct accgccaacg acaaagcaaa tgccaaacgc gccttcatac
    11041 ctgaagaata acgcttgacc ggctcgtaaa gatattgccc caactcggaa aactcttcgg
    11101 taaagttctt cacataatcg atatcgacat tgtaaatccg gcagatgaaa cgcaaattgt
    11161 ccataccggt cagactgcct tgaaacgcac cggagaatgc caaaggccaa gaaatactca
    11221 ttgtccgctt gatttcaccc gtggtcggcg gctcaacgcc actgatcaaa cggatgagcg
    11281 tcgatttacc tgcaccgttg cggccgagaa taccgatttt ctcgcccttc tccattttga
    11341 agctaatatc gtgcaagact gtccgccaac cttggcgggt cagatagcgt ttggaaacgt
    11401 gttcaactga aatcattgcg gctcaacccc tttgctgaat ctcgccacca ccgccaaacc
    11461 aagcagcagc aaaaccaagt tacacaacaa aatataccaa ggattttcgt aagtcgtgac
    11521 gctgtcgcca aaatatccgg cacggaacat ttctgtgcca tgcaccatcg ggatcatcaa
    11581 tgcatactct tgcactttcg gaggcaaatt atgtacaaaa aagaatgcac ccgataacgg
    11641 catcatcaca aaagtcaatg tgccccaaat cttgccaaac ggctcgaaat taaaggcaat
    11701 cgaacaaatc accaaaccca aaccaatcgc aaaaaaagcc atcaaaagcc aagccatcag
    11761 catataaaac atatctgccg gcatttcaat ccagccaatc gcaatcaata ccgccataat
    11821 cacaatctgc gcaatggttg caccagcaat ttccaaaatc atgcgcgcca agatggtatc
    11881 caaaactctt acattgcggt gataaagcaa gctggcattt gaagaaatcg acccaactgc
    11941 ccgttttgag gcattacgcc acatcatcaa catcggatag ccagtaatcg caaatgcgac
    12001 aatattcaaa gttgaatatc ggtctgcctt taaaaatttc cacatcaaga cgataacgaa
    12061 tgtcatcagc aacggctcaa caaacagcca taaaaagcca atattattgc gaccgtaacg
    12121 ggtgataatt tcccgcatca aaagcgcacc gattacgcgc ctttgaatgg ctaaagattc
    12181 ccaaaatgat gttttatgca aggctttcat cagtttttat gctcacgaat gctggcagtc
    12241 aacaggctca aaataccata aaccatcaag ccgataatca gagtggcaac aatgttgtat
    12301 aaccgtttag gctcatgtgc caaatccggc aggctcggtt gcgagatcac ttccaaataa
    12361 agctgctgac ggtctgcttc aaccttggca ctttccaaag aagtcatggc ggctgccaac
    12421 tgctgctctg ccaactggtt ttccaaatac acacgctgat attcggcagc ctgattagac
    12481 aacgaagaat gcccaccgcc cgaaatggca cgtaactgtt ggtcaatttc tttacgcaag
    12541 ctctgctcac gcgcctgcaa acccggaatc tgcggattct ccggagtgac tgctttcacc
    12601 tgatccagct gggtttgaat cacaatcaat tcatcttgca gcttggaaac caaccccatt
    12661 tgcacttccg attgcgcttt caaatcaaaa acgccattgg caatccggta atccgtcaga
    12721 ttctgagagg cttcctttac ccgctctgcc gccgttttca ctacttcttc cgcatagcgc
    12781 accgtatcag cacgtgcacg atcgttcaac tggttaatca atgcttcacc ttgttttaac
    12841 aaagcctcat tgattttctt agattccagc gcatcaaagg aagttacatt caacgtggaa
    12901 atacccgaaa ccgtatcaaa attgatcatc acctgatttt tatagtattg ataaaaagcc
    12961 tcttcctcgc cacggaaccc aaacccatta aagcggctga acgcatcacc tttggtttca
    13021 taaaactcac gcaccggcaa gattttacgc agttcatcca aagacgagcg cgaacgcata
    13081 tactccccaa ccgtgtaaat atcatcttgc gcacgggcaa aacctgtgcc ctgcaaaatg
    13141 gcacccaggc cattgagaga agattggctt ttaggcgagc gcaccacaaa gctcgattgc
    13201 gacgtaaaac gatcggaagc gaagaagccg aaatacacca acgaaattac cgtagggata
    13261 atcaccgtta cccaaaataa agggcttagc tttttaatcc aacttttctt tttcggcttt
    13321 ttacgctcgg ctttggtttc agtggcaact gccacaggaa gttgctcaga catcttaatt
    13381 actcacatta attagttaaa ttattaatac tgttcgcgcc actggtaacc ggcgagaaca
    13441 caaacgacaa gaatttctgc acttcagcca acggcgcatt cgacacatac aatacatctt
    13501 tattcttcac aggaaagcgc tgcatagaaa atagcgaatg cgcatcagcc atattcacac
    13561 gatataccgt tggaatctct gcctcactgc cataaccttg agcaatccat ttatcctgac
    13621 gttctgccgg caattccacc aatggcgtat agcggaacac aaacacacca cgcgcatcag
    13681 aacggcgatc ttgcaaaccg cccatacggc caatggcttc agaaagcgat aagcctctgg
    13741 ctgaaaaacc gatttcttgt gttctcccca ccgcacccat agacgtaaag gtatagggat
    13801 tggtaatcat ggtaaccaca tcaccgcgac gcagcaaaat attttgtcgc ggatttgcaa
    13861 ctaaatcttc caaggcaaca gttcgtacta cattgccacg tgtcagctgc acattcgtat
    13921 cctgcacatt tgccgttgaa ccacctaccg cagccaccgc atccaacaca cgctcaccgg
    13981 ctgccgtcag cggcatacgc acactattcc cagcacgaat caccgacaca ttcgccgcat
    14041 tattctgcac caaacgcacc atcacttgtg gctgattggc catttttttc aggcggcctt
    14101 taataatttc ctgaacctga ccaggcgttt taccgaccac cgaaatatcg ccaacaaacg
    14161 gcacagaaac cgtaccacgt gccgtgacca actgctctgg caacttagtt tgatgcgcac
    14221 tacccgagcc catcgaagaa aggccaccac caaacaatac tgccggcggc gcttcccaaa
    14281 tcataatatc caatacatca ccaatattta gcgtaccagc cgaagcataa ccatcgccaa
    14341 actgagtgaa tgactgattt atctgagcct tatataataa ctgagcaacc gtatgattca
    14401 catcaatcag ctccacttca ggaatttgaa cttcagattg ttgccctaaa gagacaattt
    14461 tttttgcgct ggggcctgat gaaggaatcg cagagcatcc tacaattaaa cttccacaca
    14521 ataataatac tgcgtgacga atataaaatt tcactttaaa cacaagccaa atcctaatat
    14581 aattataaat ggcctaatta tagcacttaa tcgaaataaa tttatgagta cgtagagtat
    14641 aattagtatt cttctttcca acttccttat acttatatac ttatagattc taaaatcatg
    14701 aaaagaattc tttgcattac aggtaccaga gccgacttcg gcaagctaaa acctttatta
    14761 gcctatattg aaaatcaccc agaccttgaa ttgcatttga ttgtaactgg tatgcatatg
    14821 atgaaaacat atggcagaac ctgcaaggaa gtaactcgag aaaactatca acatacatat
    14881 ctgttttcaa atcaaatcca aggtgaacca atgggtgccg ttttaggcaa taccattacg
    14941 tttatctctc gtctatctga tgaaattgaa cctgatatgg tcatgattca cggcgaccgt
    15001 ttagaagcac tagcaggcgc aactgtaggt gcattaagca gccgtttagt ttgccatatc
    15061 gaaggtggtg aactatctgg tacagtagat gactccattc gtcattctat tagtaaactt
    15121 tctcatatcc acttggtagc aaatgaacaa gctgtcactc gcctagtgca aatgggagaa
    15181 aaaagaaagc atattcacat catcggctcc cccgatttag atgttatggc ctcttccacc
    15241 ctcccatcct tagaagaagt caaagaatat tacggtttac catacgaaaa ttatggtatt
    15301 tctatgtttc accccgtgac tacagaagca catttaatgc cacaatatgc ggcccaatat
    15361 ttcaaagcat tagaattaag tggccaaaat atcattagca tttaccctaa caacgacacg
    15421 ggtactgaaa gtattttaca agagttatta aaatgtcaat ctgaaaaatt tatcgcattt
    15481 ccatctatac gatttgaata ctttttagtc ttattgaaac atgctaaatt tatggtcggc
    15541 aactcaagtg caggtattag agaagctcct ctctacggtg tcccttcaat tgatgttggt
    15601 acacgccaaa gtaaccgcca tatgggaaaa tctattattc atacagatta tgaaactaaa
    15661 aatatctttg atgcgattca acaagcatgc agtttaggca aatttgaagc agatgatacc
    15721 tttaatggcg gagatactcg caccagcaca gaaagatttg ctgaagtaat caacaatcct
    15781 gaaacgtgga atgtttctgc tcaaaaacgt tttatcgatt tgaatcttta aattatggaa
    15841 aaacaaaata ttgcggttat acttgcgcgc caaaactcca aaggattgcc attaaaaaat
    15901 ctccggaaaa tgaatggcat atcattactt ggtcatacaa ttaatgctgc tatatcatca
    15961 aagtgttttg accgcataat tgtttcgact gatggcgggt taattgcaga agaagctaaa
    16021 aatttcggtg tcgaagtcgt cctacgccct gcagagctgg cctccgatac agccagctct
    16081 atttcaggtg taatacatgc tttagaaaca attggcagta attccggcac agtaacccta
    16141 ttacaaccaa ccagtccatt acgcacaggg gctcatattc gtgaagcttt ttctctattt
    16201 gatgagaaaa taaaaggatc cgttgtctct gcatgcccaa tggagcatca tccactaaaa
    16261 accctgcttc aaatcaataa tggcgaatat gcccccatgc gccatctaag cgatttggag
    16321 cagcctcgcc aacaattacc tcaggcattt aggcctaatg gtgcaattta cattaatgat
    16381 actgcttcac taattgcaaa taattgtttt tttatcgccc caaccaaact ttatattatg
    16441 tctcatcaag actctatcga tattgatact gagcttgatt tacaacaggc agaaaacatt
    16501 cttaatcaca aggaaagcta aatgcaaaac aacaacgaat ttaaaattgg taatcgttca
    16561 gtaggttaca accacgaacc attgattatc tgtgaaatcg gcatcaatca tgaaggctct
    16621 ttaaaaacag cttttgaaat ggttgatgct gcctataatg caggcgctga agttgttaaa
    16681 catcaaacac acatcgttga agacgaaatg tctgatgagg ccaaacaagt cattccaggc
    16741 aatgcagatg tctctattta tgaaattatg gaacgttgcg ccctgaatga agaagatgag
    16801 attaaattaa aagaatacgt agagagtaag ggtatgattt ttatcagtac tcctttctct
    16861 cgtgcagctg ctttacgatt acaacgtatg gatattccag catataaaat cggctctggc
    16921 gaatgtaata actacccatt aattaaactg gtggcctctt ttggtaagcc tattattctc
    16981 tctaccggca tgaattctat tgaaagcatc aaaaagtcgg tagaaattat tcgagaagca
    17041 ggggtacctt atgctttgct tcactgtacc aacatctacc caacccctta cgaagatgtt
    17101 cgattgggtg gtatgaacga tttatctgaa gcctttccag acgcaatcat tggcctgtct
    17161 gaccatacct tagataacta tgcttgctta ggagcagtag ctttaggcgg ttcgatttta
    17221 gagcgtcact ttactgaccg catggatcgc ccaggtccgg atattgtatg ctctatgaat
    17281 ccggatactt ttaaagagct caagcaaggc gctcatgctt taaaattggc acgcggcggc
    17341 aaaaaagaca cgattatcgc gggagaaaag ccaactaaag atttcgcctt tgcatctgtc
    17401 gtagcagata aagacattaa aaaaggagaa ctgttgtccg gagataacct atgggttaaa
    17461 cgcccaggca atggagactt cagcgtcaac gaatatgaaa cattatttgg taaggtcgct
    17521 gcttgcaata ttcgcaaagg tgctcaaatc aaaaaaactg atattagtta ataataaaat
    17581 agattaagct attcttaaat tcagaatatt gcttatctat attaaaaatt tctaattttt
    17641 aaggttctga ttgaaatcag aaccttattt caactattac tttttactca taatcgaatt
    17701 atatacttta ggactttata atatggctgt tattatattt gttaacggaa ttcgggctgt
    17761 aaatggcctt gttaaatcat ctatcaatac tgcaaacgct tttgctgaag aaggactgga
    17821 tgttcattta attaattttg ttggcaatat tactggagca gagcatttat accccccatt
    17881 ccacttacat cccaatgtca aaacctccag catcatagat ttatttaatg acattccaga
    17941 aaatgttagc tgccgaaata ctccttttta ttctattcat caacaattct tcaaagctga
    18001 atatagtgcc cactataagc atgttttgat gaaaattgaa tctttattat ctgcagaaga
    18061 tagcattatc ttcactcatc ctcttcaact ggaaatgtat cgtttagcga ataatgatat
    18121 caagtcaaaa gccaaactaa ttgtacaaat tcatggtaat tatatggaag aaatccataa
    18181 ctatgaaatt ttggcacgaa atatcgatta tgttgactat cttcaaacgg tatctgatga
    18241 aatgctggaa gaaatgcatt cccatttcaa aatcaaaaaa gacaaattag tttttattcc
    18301 aaacatcact tatcccattt cattagaaaa aaaagaagct gatttcttta ttaaggatga
    18361 tgaagacatc gataatgctc agaaatttaa acgtatctct attgttggca gcattcagcc
    18421 aagaaaaaac caattggatg ccattaaaat catcaataaa attaaaaatg aaaattacat
    18481 tttacagata tatggcaaat ctattaataa agattacttt gaattaatta aaaaatatat
    18541 taaagacaat aagttacaaa accgtatctt attcaaaggt gaatcttccg agcaggaaat
    18601 ttatgaaaat acagatatcc tgatcatgac atcagaaagt gagggatttc catatatatt
    18661 tatggaaggc atggtgtatg atattccaat cgttgtatat gattttaaat atggagcgaa
    18721 tgattacagt aactataatg aaaatggttg tgtttttaaa actggtgata tttctggaat
    18781 ggcaaaaaaa ataattgagc tattaaataa cccagaaaaa tataaagaat tagttcaata
    18841 taatcacaat cgcttcttaa aagaatatgc aaaagatgtg gttatggcta aatatttcac
    18901 tattcttccg cgcagcttta ataacgtatc attatcgtct gctttcagcc gaaaagaatt
    18961 ggacgaattc caaaatatta ctttttctat tgaagattct aatgatttag ctcatatttg
    19021 gaatttcgag ctaaccaatc ctgcacaaaa tatgaatttt tttgctttag ttggcaagcg
    19081 aaaatttcca atggatgctc atatccaagg aacacagtgt acgattaaga tagctcataa
    19141 aaagacaggg aatttattgt cgcttttact aaaaaaacga aatcagttga atttatcaag
    19201 gggatatacc ttaattgcag aagataatag ctatgaaaaa tatattggag caatatctaa
    19261 taaaggtaac tttgaaatta ttgcaaataa aaagagctca ttagttacta taaacaaaag
    19321 taccttagag ttgcatgaga ttccccatga actacatcag aataaattac tgattgcttt
    19381 acccaacatg caaacgcctc taaaaattac tgatgataat ttaataccta tccaagcctc
    19441 cataaaatta gaaaagattg gaaatactta ttacccatgt ttcttgccat ctggcatatt
    19501 taataatatc tgcttagatt acggtgaaga atccaaaatt attaatttta gtaaatattc
    19561 ttataaatat atctatgact caattcgtca tattgagcaa catacagata tatcggatat
    19621 tatcgtttgc aatgtttatt cttgggaact tattcgtgcc tcagttattg agagccttat
    19681 ggaatttacc ggaaaatggg aaaaacactt tcagacttct cctaaaattg attatcgatt
    19741 tgatcatgaa ggtaagcgtt cgatggatga tgtcttttca gaagaaacat ttattatgga
    19801 atttccgcgt aaaaatggta tagataagaa aacagcagcc ttccaaaata taccaaacag
    19861 tattgtaatg gagtatccgc agaccaatgg ttacagtatg cgcagtcatt cactgaaaag
    19921 taatgtagtt gcggcaaaac attttcttga aaaattaaat aaaattaagg tagatattaa
    19981 atttaaaaag catgaccttg caaacatcaa aaaaatgaat cgaattattt atgagcattt
    20041 aggcattaac ataaatatcg aagcatttct aaaaccacga ttagaaaaat ttaagcgtga
    20101 agaaaaatat tttcatgatt tcttcaaaag aaataatttt aaagaggtaa tttttccaag
    20161 cacttattgg aatccaggta ttatttgtgc tgcacataaa caaggtatta aggtatctga
    20221 tattcaatat gctgccatta ctccttatca tcctgcgtat tttaaatcac caaaatcaca
    20281 ttacgttgct gataaattgt tcttatggtc tgaatattgg aatcatgagc ttttaccaaa
    20341 tccaacacga gagattggtt ctggtgccgc atattggtat gcattagatg atgtgagatt
    20401 ttcagaaaaa ctgaattatg actatatctt tctatctcaa agtaggattt cttcgcgctt
    20461 gcttagtttt gcaattgagt ttgcattaaa aaatcctcaa ctacagcttt tattttctaa
    20521 gcatccagat gaaaatatag atttaaagaa cagaattatt cctgataatc ttataatctc
    20581 cacggaatct tctatacaag gcatcaatga atctcgcgtt gctgtaggtg tttattcaac
    20641 tagcttattt gaggcattag catgcggcaa acaaactttt gttgttaaat atccgggata
    20701 tgaaattatg tcaaatgaaa tagattcagg gttattcttt gcagtagaaa cacctgaaga
    20761 aatgcttgag aaaacaagcc cgaattgggt ggctgtggca gatattgaaa accagttttt
    20821 tggccaagaa aaataatttt taagttaatc tttaaaagtg caatattttt cttattttaa
    20881 atattgcact ttattctttt aatcatagga actcacatgt attctgaaca gggaattaat
    20941 aatactatta acatatctac tacatcttta accaatgcca cgcaactaac tgtgatcggg
    21001 aataataact ctgtatatat aggtaataat tgtaaaatcg tcagctccaa
//
LOCUS       DAWEYF010000019        20989 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.019, whole genome shotgun sequence.
ACCESSION   DAWEYF010000019 DAWEYF010000000
VERSION     DAWEYF010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.019"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(88..861)
                     /locus_tag="WGN93_000492"
     CDS             complement(88..861)
                     /locus_tag="WGN93_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ0226435.1"
                     /translation="MSVNILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKASLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
     gene            complement(960..1583)
                     /gene="rsmG"
                     /locus_tag="WGN93_000493"
     CDS             complement(960..1583)
                     /gene="rsmG"
                     /locus_tag="WGN93_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ0226436.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQGEIDRLPQDVCVEKVQRLDVPGLDAERHIAILRKR"
     gene            complement(1679..1960)
                     /locus_tag="WGN93_000494"
     CDS             complement(1679..1960)
                     /locus_tag="WGN93_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226437.1"
                     /translation="MNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAACAAAAVAWIFE
                     LLLGNAALGGLRGEAVSEYAFAVWLVAMLTLPKHLTRAPVQPVVFHRKK"
     gene            complement(1957..2151)
                     /locus_tag="WGN93_000495"
     CDS             complement(1957..2151)
                     /locus_tag="WGN93_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate translocator"
                     /protein_id="HEZ0226438.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDAFALAFGRAGLLVSV
                     SAGVAVGTVLFGLCSVCLRF"
     gene            2258..2333
                     /locus_tag="WGN93_000496"
     tRNA            2258..2333
                     /locus_tag="WGN93_000496"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2291..2293,aa:Thr,seq:cgt)
     gene            2407..3534
                     /locus_tag="WGN93_000497"
     CDS             2407..3534
                     /locus_tag="WGN93_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ0226439.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            3715..4272
                     /gene="frr"
                     /locus_tag="WGN93_000498"
     CDS             3715..4272
                     /gene="frr"
                     /locus_tag="WGN93_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ0226440.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            4328..5074
                     /locus_tag="WGN93_000499"
     CDS             4328..5074
                     /locus_tag="WGN93_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ0226441.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFSRQILKGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAKGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            5077..5874
                     /locus_tag="WGN93_000500"
     CDS             5077..5874
                     /locus_tag="WGN93_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ0226442.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLSGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            5879..7114
                     /locus_tag="WGN93_000501"
     CDS             5879..7114
                     /locus_tag="WGN93_000501"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ0226443.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSLHP
                     EKFRVFALAGHKQVEKLAVQCRTFRPEYAVVADAEHAARLEALLKGDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPD
                     QAVKHPNWRMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLAQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            7149..8489
                     /gene="rseP"
                     /locus_tag="WGN93_000502"
     CDS             7149..8489
                     /gene="rseP"
                     /locus_tag="WGN93_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ0226444.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQSDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            8546..10939
                     /gene="bamA"
                     /locus_tag="WGN93_000503"
     CDS             8546..10939
                     /gene="bamA"
                     /locus_tag="WGN93_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ0226445.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGERFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            11005..11505
                     /locus_tag="WGN93_000504"
     CDS             11005..11505
                     /locus_tag="WGN93_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ0226446.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVATFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            11538..12584
                     /gene="lpxD"
                     /locus_tag="WGN93_000505"
     CDS             11538..12584
                     /gene="lpxD"
                     /locus_tag="WGN93_000505"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ0226447.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANVYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            12618..13067
                     /gene="fabZ"
                     /locus_tag="WGN93_000506"
     CDS             12618..13067
                     /gene="fabZ"
                     /locus_tag="WGN93_000506"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ0226448.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAVIMCAKRVV"
     gene            13154..13930
                     /gene="lpxA"
                     /locus_tag="WGN93_000507"
     CDS             13154..13930
                     /gene="lpxA"
                     /locus_tag="WGN93_000507"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ0226449.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRHAETQAELAVFRDFFAQSARGIIR"
     gene            14288..15679
                     /locus_tag="WGN93_000508"
     CDS             14288..15679
                     /locus_tag="WGN93_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ0226450.1"
                     /translation="MQVFLDNPKAFFETVSGWVWGPLMLMLLVGTGILLTVLLKGLQF
                     TMLGYALKQAFMPPKKHKSGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMALA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAIVVLGGIKGIAKA
                     ASFIVPAMAVFYVVGGISIIVINSDALMPAVNLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            15758..17014
                     /locus_tag="WGN93_000509"
     CDS             15758..17014
                     /locus_tag="WGN93_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ0226451.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTASRYQ
                     INKERMVRMSEYSREMFRRFEAQTGMNFEGRKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     HFNQTISRIDHNGLRIKTVETETGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFGNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            17195..18004
                     /gene="zupT"
                     /locus_tag="WGN93_000510"
     CDS             17195..18004
                     /gene="zupT"
                     /locus_tag="WGN93_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ0226452.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            18101..20938
                     /locus_tag="WGN93_000511"
     CDS             18101..20938
                     /locus_tag="WGN93_000511"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ0226453.1"
                     /translation="MLDKYNPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLANNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPGFALPEKYANLDRFVARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGTVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEVALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESEDAPIAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNTKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
BASE COUNT         5063 a         6341 c         5387 g         4198 t
ORIGIN      
        1 acgatataag tatttttatt ttaatccgcc atattaacgc actcggccaa acagcataaa
       61 ggcacgggca gcccgatttg gattgaccta tttccccgac accctcgcca tcagctcgtc
      121 cgccaaggca agatacgcct tggtaccctt tgcctgcgcg tcgtaagcca taaccggcat
      181 accgtggctc ggggcttccg caaggcggat attgcgcggg atgacggttt caaaaagcaa
      241 atccccgaaa tggctgcgca actgttcgct gacttcggca accagcctgc tgcggctgtc
      301 gtacatcgtg cgcacgatgc ccgtgatgtc caaatcggga ttgaccgcct gacggatttt
      361 gcgcacggtc gcaatcaaat cggaaatccc ctcaagcgcg taatattcgc acaacatcgg
      421 cacaatcacg ccgcctgccg ccaccaagcc gttaagcgtc aacagcgtca gcgaaggcgg
      481 gcagtcgatc aggataaagt cgtaatcttc cgccactgcc ttgagcgcgt ttttcaaacg
      541 cacttcccgg gcgatttcct gtaccaactc gatttccgca ccggccagcg cgcggttcgc
      601 gcccaacaca gcgtatccgc cctctttgct gcgtaccgcc gccgactgca cgtccgcatc
      661 gcccaataag acctgataaa cgccggactg caaactcgcc ttgtcgatgc cgctgcccgt
      721 cgtcgcattg ccctgcggat ccaaatcgac caccagcacg cgtttgccgc gcgatgccag
      781 cgaagccgcc aaatttaccg tcgtcgtcgt tttgcccaca ccgcccttct gattggcgat
      841 ggcaaggatg ttcacactca tgtcccgccc gtgtcccgtc tgatgttgaa aaaagaaaaa
      901 cagtgcggaa ttttaccttt atccgcacaa aaaaggtatt catgccgtct gaagcgcgct
      961 caacgcttgc ggagtatggc gatatggcgt tccgcatcca agcccggcac gtcaagcctt
     1021 tggacttttt cgacgcacac atcctgcggc aggcggtcga tttccccctg cggatacacg
     1081 cccttcatcg ccgcccagta tccgccgtct ttcaacagat gcaccgtcca cgacacaaaa
     1141 tccgccagtt ctgcaaacgc acggctggta accacgtcgg cacgcacgtc cgaaaccgcc
     1201 tccacgcgtc cggataccac gcgcacattg tccaatccca actcgataac cgcctgctgt
     1261 aaaaaagccg ttttcttcgt attcgcatcc aaaagggtta tctgcacatc cggacggcac
     1321 accgccgccg gaatgccggg ctgaccgccg cccgaaccga catccagcat cgtttgcaca
     1381 ccctcgatat ggggcagcag cgtcaggctg tccaaaagat gatggacaat cattttttcc
     1441 tcgtcgcgca gggcggtcag attgtaggtt ttgttccact ttttcaacaa atccacatag
     1501 gccaaaagcc tgtcctgcgc cgtttccgaa atatccagcc ccatcgcggc aatgcctgca
     1561 cgcaggcgtt ctttgcgttc catatctgct tcctgtccat attcaggcgt aatgttaacg
     1621 gaaaaacatg ccgtctgaaa ccgcgtgtcg ggtttcagac ggcatccccc gttccgtcct
     1681 attttttcct gtgaaacacc accggctgca ccggcgcgcg cgtcaggtgt ttgggcagcg
     1741 tcagcatcgc caccagccac acggcaaacg catattccga caccgcctcc ccgcgcagcc
     1801 cgcccaaggc ggcattgccc aacaacagct cgaaaatcca agccaccgct gctgccgcgc
     1861 aagccgccac gcccgacaga aacagcgcgt aacgcgaatg ccgccgcatc atctttttgt
     1921 acgccagctt cgtcaggcct gccgacacga ccaggttcaa aaacgcaaac acaccgaaca
     1981 caaaccaaac agtaccgtcc caaccgccac gccggccgac accgacacca gcagccctgc
     2041 ccgtccgaac gcaagcgcaa aggcatcatg caccgccaac gcaaacggca acgtcaaaaa
     2101 caccagcccc gcaaacagag ccgcataagg atctttctcg ttcacaaaca tcgccgtccc
     2161 cctcttccga agcagaccgc attataccgc gcactgcctt gccgcccgcc agaaaagttg
     2221 cacaaacaac cgttcatata tatcataacg aaaaaacgcc ggtgtagctc agtcggtaga
     2281 gcagcgcatt cgtaacgcga aggtcggggg ttcgattccc ttctccggca ccaataccaa
     2341 gcacagaccc tcccttcctc gggaagcctg tgctttttca catttccgct tcagacggca
     2401 accgatatga acacctcgca acgcaaccgc ctcgtcagcc gctggctcaa ctcctacgaa
     2461 cgctaccgcc accgccgcct catacacgcc gtgcggctcg gcggggccgt cctgttcgcc
     2521 accgcactcg cccggctgct ccacctccaa cacggcgaat ggataggcat gaccgtcttc
     2581 gtcgtcctcg gcatgctcca gtttcaaggg gcgatttact ccaaggcggt ggaacgtatg
     2641 ctcggcacgg tcatcgggct gggcgcgggt ttgggcgttt tatggctgaa ccagcattat
     2701 ttccacggca acctcctctt ctacctcacc gtcggcacgg caagcgcact ggccggctgg
     2761 gcggcggtcg gcaaaaacgg ctacgtccct atgctggcgg ggctgacgat gtgcatgctc
     2821 atcggcgaca acggcagcga atggttcgac agcggcctga tgcgcgccat gaacgtcctc
     2881 atcggcgcgg ccatcgccat tgccgccgcc aaactgctgc cgctgaaatc cacactgatg
     2941 tggcgtttca tgcttgccga caacctgacc gactgcagca aaatgattgc cgaaatcagc
     3001 aacggcaggc gtatgacgcg cgaacgtttg gagcagaata tggttaaaat gcgccaaatc
     3061 aacgcacgca tggtcaaaag ccgcagccac ctcgccgcca catcgggcga aagccgcatc
     3121 agccccgcca tgatggaagc catgcagcac gcccaccgta aaattgtcaa caccaccgag
     3181 ctgctcctga ccactgccgc caagctgcaa tctcccaaac tcaacggcag cgaaatccgg
     3241 ctgctcgacc gccacttcac actgctccaa accgacctgc aacaaaccgt cgcccttatc
     3301 aacggcagac acgcccgccg catccgcatc gacaccgcca tcaaccccga actggaagcc
     3361 ctcgccgaac acctccacta ccaatggcag ggcttcctct ggctcagcac caatatgcgt
     3421 caggaaattt ccgccctcgt catcctgctg caacgcaccc gccgcaaatg gctggatgcc
     3481 cacgaacgcc aacacctgcg ccaaagcctg cttgaaacac gggaacacgg ctgacggtcg
     3541 gacacgatgc cgtctgaaac gcctgccgct tcagacggca tctccaatcc tcctgccttg
     3601 tcgtcatgcc cgaataacgg tactattcgc agttaacagt tttcatgccg tctgaaaggt
     3661 ttgaagcgcg tttcagacgg ctgcccgccc accttatccc accgaaagaa caatatgatt
     3721 aacgatattc aaaaaacagc cgaaggcaaa atgcagcgtt cggtcgaagt actgaaagaa
     3781 aatctggcga aagtgcgtac cggccgcgcg cataccggtc tgctcgacca agtggaagtc
     3841 gaatactggg gcagcatggt tcccgtcagc caagttgcca acgtaacgct tctggacgcg
     3901 cgcaccatcg gcgtgaaacc gtttgagggc aatatggcgg ccaaagtcga gaaagccatc
     3961 cgcgattcaa acttgggact gaacccggca gctgtcggcg atctgatccg cgtgccgatg
     4021 cccatgctga ccgaggaacg ccgcaaagac ctgattaaag tcgtacgcgg cgaagcggaa
     4081 gaaggccgcg tctctatccg caacgtgcgc cgcgatgcca acgaccacat caaaaaactc
     4141 ctcaaagaca aagaaatttc cgaagacgag gcacgtcgcg gcgaagaagc ggttcaaaaa
     4201 ctgaccgaca aatacattac cgaagccgac aaactcctga ctgccaaaga agaagatttg
     4261 atggcaattt aacctgcacg gttcggcgtt cagacggcat ttgaatgccg aaccgcgaaa
     4321 ggcagacatg aaaagcagca cgcaggccgt tttggaacac accgccattc ccaagcatat
     4381 cgccgtgatt atggacggca acggccgttg ggcgaaaaaa cgtttcctcc cgcgcataat
     4441 gggacacaaa cgcggtttgg acgcattgga aaatatggtg aagcattgcg ccaaactggg
     4501 tgtgcaatat ctgaccgtgt ttgccttttc aaccgaaaac tggcgccgcc ccgaagacga
     4561 agtttcgttc ctgatggggc tgtttttaca ggctttgcaa aaacaggtac gccgcctgca
     4621 cgaaaacaat atgcgcctga aaatactggg cagccgcgaa cgcttcagcc gtcaaatcct
     4681 gaagggcatc gaagaggcgg aggcgttgac ggcaaacaat accggtctga ccctgagcat
     4741 tgccgccgat tacggcggca gatgggacat tttgcaggcg gcaaacaaac tgattgccaa
     4801 aggcgtatcc gagattacgg aagacacgct ggcgaaacac ttgatgctgg gcgatgcgcc
     4861 cgagccggat ttgttcatcc gcaccggcgg cgaaacgcgc atcagcaatt tcctactctg
     4921 gcaaatggct tatgccgaac tgtatttcac cgatattttg tggcccgatt ttgacggcaa
     4981 ggctttggac gatgccgtcg cttcgttcca aaaacgcgaa cggcggttcg gacgcacctc
     5041 cgagcaactg cctatcgaac agcaaaggaa ctgaatatgc tgaaacaacg ggtaataacc
     5101 gccatgtggc tgctgccgct gatgctgggc atgctgtttt acgcgccgca atggttgtgg
     5161 gctgcatttt gcggactgat tgccctgatt gccttgtggg aatatgcccg tatgggcggt
     5221 ttgtgcaaaa ttaaaaccaa ccattacctc gccgcaacct tggttttcgg cgtggttgcc
     5281 tatgcgggcg gctggatgct gcctaatttg gtttggtatg ttgttttggc attttggctc
     5341 gccgttatgc ctttatggtt gagattcaaa tggaggctca acggcggttg gcaggtttat
     5401 gccgtcggct ggcttctggt catgccgttt tggttcgcgc tcgtatccct gcgcccgcat
     5461 cccgatgatg ccctgccgct gctcgccgtg atgggtttgg tgtgggttgc cgatatttgc
     5521 gcgtatttca gcggcaaggc gttcggcaaa cacaaaatcg caccggcaat cagccccggc
     5581 aaaagctggg aaggtgcaat cggcggcgcg gtttgcgtgg cagtgtacat gaccgccgta
     5641 cgaagtgccg gctggctggc attcgataca ggctggttcg ataccgtgtt aatcggtttg
     5701 gtgctgaccg ttgtcagcgt atgcggcgac ctgttggaaa gctggctcaa gcgcgcggcg
     5761 ggcattaaag acagcagcaa cctgctgtcc ggacacggcg gcgtgttcga ccgtaccgac
     5821 agcctgattg ccgttatcag cgtctatgcg gcgatgatgt cggttttaaa ttgattctat
     5881 gccgtctgaa aacgcttcag acggcatccg gtataaagtt atccccatta tgacaccaca
     5941 agtcctgacc atattaggca gtaccggcag cataggcgaa agcacgctgg acgttgtctc
     6001 cctccacccc gaaaaattcc gcgtattcgc gctggcaggg cataagcagg tcgagaaact
     6061 ggcggtgcaa tgccggacgt tccgccccga atatgccgtc gttgccgatg ccgaacacgc
     6121 cgcccggctt gaagctttgt tgaaaggcga cggcacggcg acgcaggttt tacacggcgc
     6181 gcaggcattg gttgacgttg cctctgccga cgaagtcagc ggtgtcatgt gcgccatcgt
     6241 cggggcggtg gggctgcctt ccgcgctcgc agcggcgcaa aaaggcaaaa ccatttatct
     6301 ggcgaacaaa gagactctgg tggtttccgg cgcgttgttt atggaaaccg cccgtgcaaa
     6361 cggcgcggca gtgctgcccg tcgacagcga acacaacgcc gttttccaag ttttgccgcg
     6421 cgattacgcc ggccgtctga acgaacacgg catcgcttcg attatcctga ccgcttccgg
     6481 cggcccgttt ctgaccgccg atttaaacac gttcgacagc attacgcccg accaagcggt
     6541 caaacacccc aattggcgta tgggacgcaa aatctccgtc gattccgcca ccatgatgaa
     6601 caaaggtttg gagctgattg aagcgcattg gctgttcaac tgtccgcccg acaaactcga
     6661 agtcgtcatc catccgcaat ccgtgataca cagcatggtg cgctaccgcg acggctccgt
     6721 gttggcgcaa ctgggcaatc ccgatatgcg aacgcccatc gcttattgtt tgggtttgcc
     6781 cgagcgcatc gattcgggtg tcggcgacct ggatttcgac gcattgtccg cgctgacctt
     6841 ccaaaagccc gactttgacc gcttcccctg cctgaagctc gcctatgaag ccatgaacgc
     6901 aggcggagcc gcgccctgcg tattgaacgc cgccaacgaa gccgccgtcg ccgccttttt
     6961 ggacgggcag attaagttta ccgacattgc caaaaccgtc gcccattgtc tcgcacaaga
     7021 cttttcagac ggcataggcg acataggggg gctcttggcg caagatgccc ggacacgcgc
     7081 acaagcgcgg gcatttatcg gcacactgcg ctgatgccgt ccgaacaccg ttatcaaagg
     7141 aaaaccattt gcacaccctt ctagctttta tcttcgccat cctgattttg gtcagcctgc
     7201 acgagttcgg acactacatc gttgccagat tgtgcggcgt caaagtcgta cgcttttccg
     7261 tcggcttcgg caaaccgttt ttcacccgaa agcgcggcga caccgaatgg tgcctcgccc
     7321 cgattccgtt gggcggttac gtcaaaatgg tcgatacgcg cgaaggcgaa gtatcagaag
     7381 ccgatttacc ctacgctttt gacaaacaac accccgccaa gcgcatcgcc atcgtcgccg
     7441 ccggcccact gaccaacctc gcactggcgg ttttgctgta cggactgagc ttttccttcg
     7501 gcgtaaccga actgcgcccc tacgtcggca cagtcgaacc cgacaccatt gccgcccgcg
     7561 ccggcttcca aagcggcgac aaaatacaat ccgtcaacgg cacacccgtt gcagattggg
     7621 gcagcgcgca aaccgaaatc gtcctcaacc tcgaagccgg caaagtcgcc gtcggcgttc
     7681 agacggcatc gggcgcgcaa accgtccgca ccatcgatgc cgcaggcacg ccggaagccg
     7741 gtaaaatcgc aaaaaaccaa ggctacatcg gactgatgcc ctttaaaatc acaaccgttg
     7801 ccggcggcgt ggaaaaaggc agccccgccg aaaaagcagg cctgaaaccg ggcgacaggc
     7861 tgactgccgc cgacggcaaa cccatcgcct catggcaaga atgggcaaac ctgacccgcc
     7921 aaagccccgg caaaaaaatc accctgaact acgaacgcgc cggacaaacc cataccgccg
     7981 acatccgccc cgatactgtc gaacagtccg accacaccct gatcgggcgc gtcggcctcc
     8041 gtccgcagcc ggacagggcg tgggacgcgc aaatccgccg cagctaccgt ccgtctgtta
     8101 tccgcgcatt cggcatgggc tgggaaaaaa ccgtttccca ctcgtggaca accctcaaat
     8161 ttttcggcaa actaatcagc ggcaacgcct ccgtcagcca tatttccggg ccgctgacca
     8221 ttgccgacat tgccggacag tccgccgaac tcggcttgca aagttatttg gaatttttgg
     8281 cactggtcag catcagcctc ggcgtgctga acctactgcc cgtccccgtt ttggacggcg
     8341 gccacctcgt gttttatact gccgaatgga tacgcggcaa acctttgggc gaacgcgtcc
     8401 aaaacatcgg tttgcgcttc gggcttgccc tcatgatgct gatgatggcg gtcgccttct
     8461 tcaacgacgt tacccggctg ctcggttaga ttttacgttt cggaatgccg tctgaaaccg
     8521 cattccgcac cacaaggaac tgacaatgaa actgaaacag attgcttccg cactgatggt
     8581 cttgggcata tcgcctttgg cacttgccga cttcaccatc caagacatcc gcgtcgaagg
     8641 cttgcagcgt accgagccga gtaccgtatt caactacctg cccgtcaaag tcggcgacac
     8701 ctacaacgac acacacggca gtgccatcat caaaagcctg tacgccaccg gtttctttga
     8761 cgacgtacgc gtcgagactg cggacgggca gctcctgctg accgtcatcg aacgccccac
     8821 catcggctcg ctcaacatca ccggcgcaaa aatgctgcaa aacgacgcca ttaagaaaaa
     8881 tctcgaatcg ttcgggctgg cgcagtcgca atactttaat caggcgacac tcaatcaggc
     8941 agtcgccggc ctgaaagaag aatacctcgg gcgcggcaaa ctcaatatcc aaatcacgcc
     9001 caaagtaacc aaactcgccc gcaaccgcgt cgacatcgac atcacgattg acgagggcaa
     9061 atccgccaaa atcaccgaca tcgaatttga aggcaaccaa gtctattccg accgcaaact
     9121 gatgcggcag atgtcgctga ccgaaggcgg catttggaca tggctgacac gaagcaacca
     9181 attcaacgag cagaaatttg cccaagacat ggaaaaagta accgacttct accaaaacaa
     9241 cggctacttc gatttccgca tcctcgatac cgacatccaa accaacgaag acaaaaccaa
     9301 gcagaccatc aaaatcaccg tccacgaagg cgaacgtttc cgttggggca aagtctccat
     9361 cgaaggcgac accaacgaag tccccaaagc cgaactggaa aaactgctga ccatgaagcc
     9421 cggcaaatgg tacgaacgcc agcagatgac cgccgttttg ggtgagattc agaaccgcat
     9481 gggctcggca ggctacgcat acagcgaaat cagcgtacag ccgctgccaa acgccgaaac
     9541 caaaaccgtc gatttcgtcc tgcacatcga accgggccgg aaaatctacg tcaacgaaat
     9601 ccacatcacc ggcaacaaca aaacccgcga cgaagtcgtg cgccgcgaat tgcgccaaat
     9661 ggaatccgcg ccttacgaca cctccaagct gcaacgctcc aaagagcgcg tcgagctttt
     9721 gggctacttc gacaacgtac agtttgatgc cgtcccgctt gccggcacac ccgacaaagt
     9781 cgatttgaac atgagcctga ccgaacgttc caccggctcg ctcgacttga gcgcgggctg
     9841 ggtacaggat accggcctgg tcatgtccgc aggcgtttcc caagacaacc tgttcggtac
     9901 gggcaagtcg gccgccctgc gcgcctcacg aagcaaaacc acgctcaacg gctcgctgtc
     9961 gtttaccgac ccgtacttca cggcagacgg ggtcagcctg ggctacgatg tttacggaaa
    10021 agccttcgac ccgcgcaaag catcgaccag catcaaacaa tataaaacca ccacggcagg
    10081 cgcaggcatc cgcatgagcg tgcctgttac cgaatacgac cgcgtgaatt tcggtttggt
    10141 ggcagaacac ctgaccgtca acacctacaa caaagcgccc aaacactatg ccgactttat
    10201 caagaaatac ggcaaaaccg acggcacaga cggcagcttc aaaggctggc tgtacaaagg
    10261 taccgtcggc tgggggcgca acaaaaccga cagcgcgtta tggccgacgc gcggctacct
    10321 gacgggcgtg aacgccgaaa tcgccctgcc cggcagcaaa ctgcaatact actccgccac
    10381 ccacaaccaa acctggttct tccccctgag caaaaccttc acactgatgc ttggcggcga
    10441 aatcggctat gccaacggct acggcaaaac caaagaaatc cccttctttg aaaacttcta
    10501 cggcggcggc ctgggttcgg tacgaggtta cgaaagcggc acactcggtc cgaaagtcta
    10561 tgacgaatac ggcgaaaaaa tcagctacgg cggcaacaaa aaagccaacg tctccgccga
    10621 gctgctcttc ccgatgcccg gcgcgaaaga cgcgcgcacc gtccgcctga gcctgtttgc
    10681 cgacgcaggc agcgtgtggg acggcaaaac ctacgacgac aacagcagtt ccgcgaccgg
    10741 cggcagggtt caaaacattt acggcgccgg caatacccat aaatccacct ttaccaacga
    10801 attgcgctat tccgccggcg gcgcggttac ctggctctcg cctttaggcc cgatgaaatt
    10861 cagctacgcc tacccgctga agaaaaaacc ggaagacgaa atccaacgct tccaattcca
    10921 actcggcacg acgttctaat cccgcaaatg ccgtctgaag cccttcagac ggcatttcgc
    10981 ggcaacattc gaaggagttt taccatgacc cgtttgaccc gcgcgtttgc cgcggctctg
    11041 atcggtttgt gctgcaccgc aggcgcgcac gccgacacct tccaaaaaat cggctttatc
    11101 aacaccgagc gcatctacct cgaatccaag caggcgcgca agattcaaaa aacgctggac
    11161 agcgaatttt ccgcccgtca ggacgaattg caaaaactgc aacgcgaagg tctggatttg
    11221 gaaaggcagc ttgccgaagg caaactcaga aacgcaaaaa aggcgcaagc cgaagaaaaa
    11281 tggcgcgggc tggtcgcaac gttccgcaaa aaacaggcgc agtttgaaga agactacaac
    11341 ctccgccgca acgaagagtt tgcctccctc cagcaaaacg ccaaccgtgt catcgtcaaa
    11401 atcgccaaac aggaaggtta cgatgtcatt ttgcagaacg tgatttacgt caacacccaa
    11461 tacgacgtta ccgacagcgt cattaaagaa atgaacgccc gctgaccctt tcagacggca
    11521 taccgaacag gaaaaccatg attccggcca cctacaccct gtcccaaatc accgcgcggc
    11581 tcggcggcga atggcgcggc gaggacattt ccgttaccgc cgtgcgcccg ctcgcagacg
    11641 cgcaggcgga acacatcagc ttccttgcca atccgaaata caaagccgaa gtccacgaca
    11701 gcagcgcggg cgcggtcatc gtttccgcca aagcggcaga cggatttgaa gggcgcaacc
    11761 tgattgtcgc cgacgacccc tatctctatt tcgccaaagt cgcccgcctg ttttcacccg
    11821 tcgtcaaagc gcgcggcggc atccatccga ccgccgtcgt cgaaccgggc gcgaccgttc
    11881 ccgccagctg cgaaatcggc gcgaacgtct acatcggcgc aaacaccgtg ctcggcgaag
    11941 gctgccgcat cttggcaaac gccgtcgtcc aacacgattg caaactgggc gacgaagtcg
    12001 tcctgcatcc caacgccgtc gtttattacg gctgcacact gggcagacgc gtcgaaatcc
    12061 acagcggcgc ggtcatcggc gcggacggtt tcggactcgc ttttgccggc gattcatggt
    12121 ttaaaatccc gcaaaccggc gcggtaacgc tgggcgacga cgtagaaatc ggctcgaaca
    12181 ccaacatcga ccgcggcgcg atgagcgaca ccaccgtcgg caacggcacc aaaatcgaca
    12241 accaagtcca aatcggacac aactgcaaaa tcggttcgca caccgtcatc gccgccaaaa
    12301 ccggcatctc aggcagcgta accataggca gctactgcat catcggcggc ggcgtcggta
    12361 cggtcggaca catcgaaatc gccgacaaaa ccaccatcgg cggcggcacg tccgtcaccc
    12421 acagcattac cgaaagcggc aaacacctcg ccggcatctt cccgatgtcc acccataaag
    12481 aatgggcgcg caacgctgtt tacatccacc gcttaagcga aatgaacaaa cggctcaaaa
    12541 cactggagca gcagctttca gatgccggtc aagacagcaa ataaccaaac cgactttatt
    12601 caaggaatac gacagacatg gacgtacaac tccccatcga agccaaagac atccaaaaac
    12661 tcatccccca ccgctatccg tttctccagc tcgaccgcat caccgccttc gagccgatga
    12721 aaaccctgac cgcgattaaa aacgtcacca taaacgaacc ccagttccaa ggccatttcc
    12781 ccgacctgcc cgtgatgccc ggcgtactca tcatcgaagc gatggcgcag gcgtgcggca
    12841 cgttggcgat tttgagcgaa ggcgggcgca aagaaaacga attcttcttc ttcgccggca
    12901 tagacgaagc ccgtttcaaa cgccaagtca tccccggcga ccaactcgtc tttgaagtcg
    12961 agctgctgac cagccggcgc ggcatcggca aattcaacgc cgttgccaaa gtagacgggc
    13021 aagtcgccgt cgaagccgtg attatgtgcg ccaaacgcgt ggtttgagtg ttcagaaaaa
    13081 ggtcgtctga aagttttcag acgacctgtt gccgtcgcgc atcttcgcgg caacacgaca
    13141 ggaaaggaaa aacatgaccc tcatccaccc gaccgccgtc atcgacccca aagccgaact
    13201 cgactccagc gtcaaagtcg gcgcgtacac cgtcatcggc cccaacgtcc aaatcggcgc
    13261 gaataccgaa atcggcccgc acgccgtcat caacggccac accagcatcg gcgaaaacaa
    13321 ccgcattttc caatttgcca gcctcggcga aatcccgcag gacaaaaaat accgcgacga
    13381 gccgaccaag ctgattatcg gcaacggcaa caccatccgc gaattcacca cctttaattt
    13441 aggcacggta accggcatcg gcgaaacccg tatcggcgac gacaactgga ttatggcgta
    13501 ctgccacctc gcgcacgact gcgtggtcgg caaccacacc atcttcgcca acaacgcctc
    13561 gcttgccgga cacgttacca tcggcgacta cgtcgttttg ggcggctaca cgctggtttt
    13621 ccaattctgc cgcatcggcg actacgccat gaccgcgttt gccgcaggcg tacacaaaga
    13681 cgtgccgccc tactttatgg catcgggcta ccgcgccgaa ccggcggggc tcaacagcga
    13741 aggcatgcgc cgcaacggtt ttaccgcaga gcagatttcc gccgtcaaag acgtgtacaa
    13801 aaccctctac catcgcggca ttccgtttga agaagccaag gcagacattc tccgccacgc
    13861 cgaaacccaa gccgagcttg ccgtattccg agactttttc gcacaatcgg cacgcggcat
    13921 catccgctga ccgtaccctt ttgatgccgt ctgaaacccc gacagcgttt cagacggcat
    13981 cggttttttt aaagcggtat attgtttgat cgatgcatca ttttgtagat ttcagaagta
    14041 tggcagtcgg cagcattgat gatttctgcc gcccgccaca tccctattcg gacatttcat
    14101 tgtgacctcc gccgctgctt ttaaagaatt gcaaacaatt tccgcagctt gaaccggcct
    14161 gttttcggcg aaaaaaacca aaagtatttt tcaaaagaac atattgtctt attggatatt
    14221 ctgtgctgaa attactggac actacaaaag tggtgtttta aaaataaaac agacaaagga
    14281 gaaagccatg caagtgtttt tagacaatcc caaagccttt tttgaaaccg tcagcggctg
    14341 ggtttgggga cctttgatgc tgatgctgct ggtcggcacg ggtattttgc tgactgtttt
    14401 attaaaaggt ttgcagttca cgatgttggg ttatgcgctg aaacaggcgt ttatgccgcc
    14461 aaagaagcat aaaagcggcg aaggccacga aggcgatatt tcccatttcg cggcgttgat
    14521 gaccgcgctg tccgccacca tcggtacggg taacatcgcc ggcgtggcga ctgcggtggt
    14581 aaccggcggc ccgggcgcgg tattttggat gtggatgacc gccattttcg gcatggccac
    14641 caaatacggc gaaggcgtgt tggcggtgaa ataccgcgtc aacaattcca aaggcgaaat
    14701 gtccggcggc ccgatgtatt acatcgaaaa aggcttgggc aaaaactgga aatggatggc
    14761 gttggcgttc gctttattcg gcacattcgc ttccttcggt atcggcagct cggtgcagtc
    14821 caactcggtt gcacaggcgg tgcaaaccag cttcggtatc gaacctgcct ataccggcat
    14881 tacgttgacc gttctgactg ccatcgttgt gttgggcggt atcaaaggca tcgccaaagc
    14941 cgcttctttc atcgtacctg ccatggcagt gttttatgtg gtaggcggta tctccattat
    15001 cgtgattaat tctgatgcgc tgatgcctgc cgtcaacctg attttctccg atgcgttcag
    15061 cgcgcaggcc gtggcaggtg gtgctatcgg taccgttatc cgctacggcg tggcgcgcgg
    15121 cgtgttctcc aatgaggcgg gcatgggttc tgcgccgatt gccgccgcag ccgccaaaac
    15181 cgaccatccc gtccgtcagg ccttggtttc tatgaccggt acgtttttgg ataccatcgt
    15241 cgtttgctcg attaccggca tcgtgttggt aatgggactg ctcggcgcgg gcggcgagtt
    15301 tgtcaaacct gaagtgagcg gcgcggcact gacaaccgtc acattccaaa aaatgctgcc
    15361 cggcatcggc ggctggattg tcaccatcgg cctgattttc tttgcctact caaccattct
    15421 cggctggtgc tattacggcg aaaaatgcgc ggtgtatgtt ttcggcgaga aatttgccgg
    15481 tttgtaccgc gtcggttatg tttcttccgt tatgctgggt accgtgttga gccttgattt
    15541 ggtgtggctg gcttcggaca cattcaacgg cttgatggca ttgcccaacc tgattgcact
    15601 tttattgatg gcgaaagtca tcgtcaatga aacgcgcgac ttcaaacaaa aaatcacaaa
    15661 cggcgaattg ccgcattaat atccgaggcc gtctgaatcc gaatattcag acggcacggc
    15721 atattaagtc tgttttgaaa aagccggagg gagaaacatg aaagtgcttg ttttaggtgc
    15781 gggtgttgcc ggcgtgtctt ccgcgtggta tctggcagag gccggacatg aagtaacggt
    15841 catcgaccgc gccgagggtg tggcgatgga aaccagtttt gccaacgcag gccagctttc
    15901 ttacggctat accacgcctt gggctgcacc cggtattccg accaaagcgc tgaaatggct
    15961 gtttaaaagc catccgcctt tgctgtttcg ccccgacggc agcctgtatc aaatcgaatg
    16021 gctgtggcgg atgctgcaaa actgcacggc atcccgctat caaatcaata aagagcgcat
    16081 ggtcaggatg tccgaataca gccgtgaaat gttccgccgt tttgaagcgc aaaccggcat
    16141 gaattttgag ggacgcaaaa aagggacgtt gcagattttc cgtcaggcta aagaagttga
    16201 agcggcagaa caagacattg ccgttttgga acgctacggc gtgccgtacc gccgtctgaa
    16261 gcccgaagaa tgcgcagaat tcgagcctgc gctggcacgc gttaccgcca aaattgccgg
    16321 cggcctgcac ctgcctgcgg atgcaaccgg cgactgccgc ctcttcactg aaaacctata
    16381 caaattgtgt caggaaaagg gcgtacggtt tcatttcaac caaaccatca gccgcatcga
    16441 ccacaacggg ctgcgcatca aaaccgttga aaccgaaaca gggcggtttg aagcagatgc
    16501 cgttgtctgc gcgctcggtt gtttcagcag gacggttttg gcgcagttgg atctcaatct
    16561 gcccatttat cccgtcaaag gctattcctt gaccctgccg gtcacaaatt ccgacggcgc
    16621 accggtgtcc accgttttag atgaaagcta caaagtcgcc atcacgcgct ttggcaacag
    16681 aatccgcgtc ggcggtatgg cggaattgtc gggctacgaa atcaaactgc ccgaaaaacg
    16741 ccgcgaaacc ttggctttgg tcgtcaacga tttgttcccg gaaggcggcg atttgagcca
    16801 agcattgttc tggagcggcc tcagaccgat gacgcccgac agcacgccgt taatcggccg
    16861 cacccgcttt gaaaacttat tcttgaatac aggccacggc actttgggct ggaccatgtc
    16921 gctgggttcg gcaaaattaa ccgccgatat cgtgagcggc aaagacaccg aaatccgaag
    16981 cgacgatttg agcctgtcgc gctatcaggc ttaagctgga aagcgataag gtttagcgac
    17041 atttcaaatt taaaggccgt ctgaaaatca tttttcagac ggccttttgt ttcaaaattc
    17101 gggtatccaa tcaataaaat aaataataac tattatcata cgcattaaaa agtgttagtc
    17161 tgaacctgtc ccagctttta gcgcaggttt tcccatgccc gatttttcga tgtccaattt
    17221 ggccgttgcc ttttccatta cgttggctgc cggtttgttt accgtattag gcagcggctt
    17281 ggtgatgttt tccaaaacgc ccaatccgcg cgtgttgtcg tttggtttgg catttgccgg
    17341 cggtgcgatg gtgtatgttt ccctgacgga gattttcagt aagtccagcg aggcgttcgc
    17401 tgaaatttat gataaagacc acgcgtttgc ggcggcgacc atggcatttt tggccgggat
    17461 gggcggcatt gcgctgattg accgtctggt gccgaacccg catgaaactt tagacgcgca
    17521 agacccgtcg tttcaagaaa gcaaacgccg ccatatcgcg cgagtcggca tgatggcggc
    17581 gtttgcgatt actgcgcaca atttccccga aggcttggcg acgttttttg ccacattgga
    17641 aaatccagca gtcgggatgc ctttggcctt ggcgattgcc atccataata ttccggaggg
    17701 catttccatc gccgcgccgg tttattttgc cacccgcagc cgtaagaaaa cggtgtgggc
    17761 gtgtctgcta tccggcttgg ccgagccgtt gggggcggct ttgggctatt tggttttgca
    17821 gccgtttttg tcgcctgccg tgtttggttc ggtattcggc gtgatagccg gtgtgatggt
    17881 gtttttggcg ttggacgagc tgctgccggc tgccaaacgc tattcagacg gccatgaaac
    17941 cgtttacggc ctgacaatgg gcatggcggt gattgccgtc agcctggtat tgttccattt
    18001 ttaaaacctg tatgccaaag gccgtctgaa atgattcaga cggccttttt gcgttataat
    18061 ccgcacatca aaaataacct taatttcaca aagttccatc atgttagaca aatacaatcc
    18121 agccgaaatc gaatccaaac attatcaaaa ctgggaagag cagggctatt tccaacctga
    18181 tatggatttg accaaaccgt ctttctccat ccaactgccg ccgcccaacg taaccggcac
    18241 gctgcacatg ggccatgcct tcaaccaaac cattatggac ggcctgaccc gctactaccg
    18301 catgaaaggc tgcaacaccg cctggattcc cggcaccgac cacgcgggca tcgccacgca
    18361 aatcgtggtc gagcgtcagc ttgccgcgca aaacgtgtcc cgtcatgact tgggccgcga
    18421 aaaattcttg gaaaaagtgt gggaatggaa agaagtgtcc ggcggcacga ttacccaaca
    18481 aatgcgccgc gtgggctgct ctgccgactg gacgcgcgag tatttcacga tggacgacgt
    18541 gcgcgccgaa accgtgacag aagtgttcgt acgcctgtat gaacagggct tgatttatcg
    18601 cggcaaacgc ttggtaaact gggatcccgt gcttggcacg gcggtatcgg atttggaagt
    18661 ggaaagcgtg gaagaacaag gctctatgtg gcacatccgc tatccgctgg ccaacaatcc
    18721 tgccgaagcc gttatcgtgg cgaccacccg ccctgaaacg ctgctgggcg acgtggccgt
    18781 tgccgtcaat cctgaagacg aacgttatac ccatttgatt ggcaaggaat taatcctgcc
    18841 gctgaccggc cgcaccatcc ccgtgattgc cgatgaatac gtcgaaaaag acttcggtac
    18901 cggctgcgtg aaaatcacgc ctgcgcacga cttcaacgac tacgaagtcg gcaaacgcca
    18961 cgacacgcgc ttggttaatg tgttcgactt ggaagccaaa gtgctggcaa acgccgaagt
    19021 gttcaacttc aaaggcgaag cgcaaccagg ctttgccctg cctgaaaaat acgcaaactt
    19081 agaccgcttt gtcgcgcgca aacaaatggt tgccgatttg caggaacaag gcttcttggt
    19141 cgaaatcaaa gcgcatacgc tgatgacgcc gaaaggcgac cgcacaggtt cggtcattga
    19201 gccgatgctg accagccaat ggtttgtcgc catgtccgcc acaccgaacg gcggcgagcc
    19261 tgacagcgaa ttcaaaggct tgagcctcgc cgacaaagcc aaaaaagccg tcgacagcgg
    19321 cacggtacgc tttatccccg aaaactgggt caacacttac aaccaatgga tgaacaacat
    19381 ccaagactgg tgtatctcgc gccaactgtg gtggggacat caaatccctg catggtacga
    19441 caacgaaggc aatgtgtacg ttgcccgcaa tcaggaagaa gccgaaaaac aagccggcaa
    19501 aaccggtttg acccgcgaag aagacgtatt ggacacatgg ttctcctccg cgctcgtgcc
    19561 gttctccacg ctcggctggc cgtctgaaac cgacgaactc aaagccttcc tgccgtccaa
    19621 cgtcttggtt accggctacg aaatcatctt cttctgggtg gcgcgcatga ttatgatgac
    19681 cacccacttc accggcaaag taccgtttaa agacgtgtac atccacggca tcgtgcgcga
    19741 ccacgaaggc aaaaaaatgt ccaaatcaga aggcaacgtc atcgaccctg tcgatttgat
    19801 tgacggcatc gacttggaca agctgctggt aaaacgtacc accggcctgc gcaaacccga
    19861 aaccgcgccg aaagtggaag aagccaccaa aaaactcttt cccgaaggca tccccggtat
    19921 gggcgcggac gcattgcgct tcactatggc gagctacgcc agcctcggcc gcagcgtcaa
    19981 cttcgacttc aaacgcgccg aaggctaccg caacttctgt aacaaaatct ggaacgccac
    20041 caacttcgtc ttgatgaaca ccgaaaacca agactgcggc tacggcgcaa ccgctgccga
    20101 accgcgcggc tattccttcc ccgatatgtg gattgtaggc cgtctgaatc agaccatcga
    20161 gcaggttacg caagcctacg aaacctaccg ctttgatttg gcggcagaaa ccctgtacag
    20221 cttcgtatgg aacgactatt gcgactggta tttggaactt gccaaagtgc agcttcaaac
    20281 cggctgcgcc agccgccaac gcgccacacg ccatacctta ttgcgcgtac tcgaagtcgc
    20341 cctgcgcctg ctgcacccga ttatcccgtt cattaccgaa gaactgtggc aaaccgtcgc
    20401 ccctatgtgc gacgcgaaaa ccgccgacag catcatgctc gcccgcttcc ccgaagccga
    20461 cggcggcgat attgttcaga cggcattcga gcaaatgact gtgttgcagg atttgattgg
    20521 cgcagtccgc aacctgcgcg gcgaaatggg catccagccc aacgtgaaag ccccgctgtt
    20581 tgtcgaaagc gcagacgact tggcggacta cctcaaatac ctgccgatga tgacccgcct
    20641 gaccgaagca cggcaagtcg ccgccctgcc cgaaagcgaa gacgcgccca tcgccgtctg
    20701 caacggtgcg cgcctgatgc tgaaagtcga aatcgacaaa gccgccgaaa ccgcccgctt
    20761 gagcaaagaa gccgagaagc tgcaaaaagc cttggacaaa ctcaacacca aactctccaa
    20821 acccggctac accgaaaaag ccccggcgca tctggtggaa aaagacaaag ccgatttggc
    20881 ggagttggaa gacaaaatgg caaaagttca aaatcagttg gcgaagttga aagactgatt
    20941 tgattgaata aacaaggccg tctgaaaaat gtttttcaga cggcctctt
//
LOCUS       DAWEYF010000020        20690 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.020, whole genome shotgun sequence.
ACCESSION   DAWEYF010000020 DAWEYF010000000
VERSION     DAWEYF010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.020"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(63..239)
                     /locus_tag="WGN93_000512"
     CDS             complement(63..239)
                     /locus_tag="WGN93_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226454.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMRTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
     gene            complement(242..1600)
                     /locus_tag="WGN93_000513"
     CDS             complement(242..1600)
                     /locus_tag="WGN93_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ0226455.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1724..3371)
                     /locus_tag="WGN93_000514"
                     /pseudo
     CDS             complement(1724..3371)
                     /locus_tag="WGN93_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
     gene            complement(3394..4872)
                     /locus_tag="WGN93_000515"
     CDS             complement(3394..4872)
                     /locus_tag="WGN93_000515"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ0226456.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKFWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDGYGAELIGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFRTPWGEGKCHTRLLGRFNAQNLAACVALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRLLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4897..6642)
                     /locus_tag="WGN93_000516"
     CDS             complement(4897..6642)
                     /locus_tag="WGN93_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ0226457.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WGN93_000517"
     CDS             complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WGN93_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ0226458.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WGN93_000518"
     CDS             complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WGN93_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ0226459.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WGN93_000519"
     CDS             complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WGN93_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ0226460.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8680..9897
                     /locus_tag="WGN93_000520"
     CDS             8680..9897
                     /locus_tag="WGN93_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ0226461.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEEIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTY
                     SARPLHDLQLSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYL
                     PQSHFLLNLGITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVD
                     WAGFRFGDICHKL"
     gene            10029..10105
                     /locus_tag="WGN93_000521"
     tRNA            10029..10105
                     /locus_tag="WGN93_000521"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10063..10065,aa:Met,seq:cat)
     gene            10113..10188
                     /locus_tag="WGN93_000522"
     tRNA            10113..10188
                     /locus_tag="WGN93_000522"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10146..10148,aa:Ala,seq:ggc)
     gene            complement(10479..11300)
                     /locus_tag="WGN93_000523"
     CDS             complement(10479..11300)
                     /locus_tag="WGN93_000523"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ0226462.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEHLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11333..11977)
                     /locus_tag="WGN93_000524"
     CDS             complement(11333..11977)
                     /locus_tag="WGN93_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ0226463.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WGN93_000525"
     CDS             complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WGN93_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ0226464.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKADEVEEK
                     ADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEKKASKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMGAYADRR
                     SAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            complement(12931..14427)
                     /locus_tag="WGN93_000526"
     CDS             complement(12931..14427)
                     /locus_tag="WGN93_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ0226465.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLVQTDCQVPQMPSENTKLLDLVDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAVELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GSLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14441..14761)
                     /locus_tag="WGN93_000527"
     CDS             complement(14441..14761)
                     /locus_tag="WGN93_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ0226466.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15244..16770
                     /gene="putP"
                     /locus_tag="WGN93_000528"
     CDS             15244..16770
                     /gene="putP"
                     /locus_tag="WGN93_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ0226467.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            17021..20626
                     /gene="putA"
                     /locus_tag="WGN93_000529"
     CDS             17021..20626
                     /gene="putA"
                     /locus_tag="WGN93_000529"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ0226468.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4839 a         5991 c         5055 g         4805 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagggacttt ctcaatcacg caaattgggt aactccccgg atttttaccg
      121 ccgcccaagt ctaaacataa atcttcataa agatacgcct gcgtccgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcagcaat aaggctttaa aaaaacgtcg gcttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gggcatacgc gccgacttcg gcgtgcatag
      481 cggcggcttc gtcctcgccc agttcgccca tatcgcccat tacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc cgggttcgca ttataagtat
      601 cgtcaatcag ggttgcgccc ttgattccgg atttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gaccgaaccg gtaatgccga acacaaacgg attcacattt tcacgccaca
     1321 cctttgccaa cgtttgcaat gcggcaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt ttttatcgcc tgttttactg tggtaaaaca
     1681 cagattattt tcccattctc attcggcatt ttttctgtac gtatcatttt ttagacgtat
     1741 ttttagtcga tttgcctttt cccgcatacc acggcgcggg gtcgtcgggc agtccgtcga
     1801 taaaggcaag gttattgcct tcgccctgca catcgggaac attcccccaa aaatcatagc
     1861 cgtcatcggg caactcgtcg gtttcgatac ccgtccaact gccgaatccg cgtaaaaaat
     1921 taaacgcgct gcgcctcact ttaatcattt cgcgccgcgt gtcatcggac gaaattttaa
     1981 ccagcggcac gccgtagctt tgacgcttcc acgcaccatg tgtcaacgtt cgctcgccgc
     2041 ctttaccgac atgcatcaaa ccgtggtcgg aaaagtaaac caaagaccag ctttctttat
     2101 tttcattcaa tatcttaact gtatcttcta aaaatttatc ggtttgcgcg atggtggaaa
     2161 catagcagga tattttttca gtttgatact gaaaccgccg cgcatcctta tccaaacgtg
     2221 tgcaaaaatc actgtgcgaa cccatcaggt gcatcacaat cagccgaggc ttcgtgcctg
     2281 catttcctat caaaacccgt ttgaacgccg gcaacaaaag gcggtcgctc aaccccgcgc
     2341 ttttgccata atcacccctt tgggtaaacc acggataatc gctgcgtagg gcataggtgg
     2401 aaatttcgtt ggcaaaatgc cccaacattc cttgattaga cagccacgcc gtccgaaaac
     2461 ccgcctgctt cgccaagctg acgatgttat tgttcggttc tcccggcagc cccaaagtct
     2521 gcggcagcga aagattcgtc gcgtgggcgg tcgattggta accgtttatc aacagccctt
     2581 tggtctgact caaaaaaggc gtatcgggca atgggaaacc gtaaacattc atataatccg
     2641 aacgcgcgct ctcaccgata accacaacat aatttttata cttgggcgca acatgacgga
     2701 tatgccatgt tgacgctttt tttgctgctt ccaaaatgtg ggcgcgcttg gcggcatatt
     2761 gtgccggcgc ggaagccaaa tcgtaataca ggtcgaaaat attcaacaac aggccggcat
     2821 caggttctcg caaatcttta tcgctggcga ttttatccat caccgcgcag gacaaaatca
     2881 aagtcaataa tatagtcagc catattttgc tgcggcgttt atagtttttt acgtcagcaa
     2941 ataccccccc ccgatacaca atatttccaa actgtcaagc caaaaatgaa aaataatgcc
     3001 tgcacaaaat aaagcgaccc gggaagattg ccgacaaatt cacgcgcctc ggcaggattg
     3061 ctttccaata tcgaaccgac tatctgataa gacggcgcac catacaacca gccgaccggc
     3121 aaatataggg cggttgtgcc gacgtaaatc agtaaaacaa ctgaagaaac gcgcgggaaa
     3181 ccgcgtgcca ataataataa aaatacaacc gaagccaaag cacccacggc agaataacgg
     3241 tagccgtatt catattccaa gtgataacct gatgcgatgg ccgcgccaaa acaaaaggct
     3301 aaaagcgcgc aaatgcccaa tgtatttttt aatgtctgat tcatattttt tattcgggcg
     3361 gattgtttca tacgatgccg tccgaatatc ccattattta cgagttaaca aagcctgtcc
     3421 gacgatttca agatcggaaa aacggtgctt cacgccttgt acatcctgat agttttcatg
     3481 ccctttgccg gcaatcagga tgatgtcgtt tgcggcggct tgttcaaccg cataacggat
     3541 ggcggcggca cggtcggctt cgacgcattc gggcgcggga acggcaggca ggatgtcgtt
     3601 gatgatgtcg tgcggatttt ccaaacgcgg attgtcgctg gtgacgacga ctttatccgc
     3661 gccctgtacg gctgccgcgc ccatcagcag gcgtttgccg cgatcgcggt taccgccgca
     3721 accgaatacg caccacaaag ccgcaccctg cggtttgatt tcctgcaagg tggcgagtgc
     3781 tttttccaat gcgtcgggcg tgtgggcata atcgacaacg accaaaggtt tgccgctgtt
     3841 cataatacaa tccatacggc ctgaagcagg acggattttt tccagtacat ccaatacctt
     3901 atccagcgga tagccgttgg cgcaaagcaa agcgacacag gcggcgagat tttgcgcgtt
     3961 gaaccgtccg agcaggcgcg tgtggcattt cccttcgccc cacggggttc ggaatacggc
     4021 ttctatgccg tctgaagagg cggtaaagtc ggtaatgcgg atgtcggcgt gttcgctgaa
     4081 gccgtaactg taaacggcca aatcggggca gtcttttttc agacggccta tgagttctgc
     4141 gccgtatccg tcatccacgt tgatgactgc gtgtttcaag ccgtgccagt aaaacaggcg
     4201 cgacttgatg gcaccgtagg cttccatcgt gccgtggtag tcgaggtggt cgcgggtgag
     4261 gttggtaaag attgcgctgc ggaatgacac gccgttgacg cgcgactggt caagcccgtg
     4321 gctggagact tccatcgcgg cgactgttgc gccttgttga cggaaacggt agagcagggt
     4381 ttggacatcg acgggggcgg gtgtggtatg cgtggtttct tccaatgcac cccaaaagcc
     4441 gttgccgacc gtgccgacaa tggcggtttt ttcgcccaac aaatcggcag cttgcgccag
     4501 ccattgcgtg atggaggttt tgccgttggt tccggttacg ccccagaatt tgagaccgtc
     4561 tgaaacgttg ccgtaaactt gcgccgccaa tatgccggca cggtgtttca aatctttgat
     4621 gccttgattg gggactttcc attcgggatt ccacgcaaat ttgccgtcgt cgtcccaaaa
     4681 aacaaaagcc gcgccgttgg caacggcggc ggggatataa ctgcgtccgt cggcatattc
     4741 gcccggacag gcaacgaaaa tatcgccttg tttgatttgg cggctgtctg aatgcaacaa
     4801 acgccctgcc gcgtttgcac acgacagggt cgggatgccg gtttcagcca aaggggttaa
     4861 cttgctgaac ataaaacaat ctcgttgata ctcggattaa gacggtgttt tgacggctgc
     4921 ggcggtcagg ggcttggtcg gggaaatgcc caagatgttc agactgccgc ccataatttt
     4981 tttgaagggc ggccctgcca ctacgccgcc gtaataaccg tgggcagtcg gttcgtcaat
     5041 ggttaccgcc acaatcacac gggggttttt ggcgggggca aaaccgataa aggtagcgat
     5101 gtgtttgttg tcggcataac gcccgttgac gaacttgcgc gccgtgccgg ttttcgcgcc
     5161 gacatcgaaa ccgtccaccg cacccgccgt accggtgccg cccggctcgg ttacggaaac
     5221 catcagattg cgtacctcgc gcgcggtcga ttctttgaat atgcgtttgc cttgcggcgc
     5281 aaccgcctgt ttttcaaagc tgaccggcag taaaacgccg tcgtgcgtca gtgcggtata
     5341 ggcgcgcgcc aattgcagca ggctcaattg caggccgtaa ccgaaagaca tcgtcgcctg
     5401 ttcaataggc cgccacctgc gccaatttct caacaaacct gcagtttcgc ccggaaagcc
     5461 cgagtgcata cgcacaccga tgcccaactc atgatagaag tcatacattt cttcggcacc
     5521 gaaacgcgca gacagtttgc ttgtgccgac gttggacgat ttctgcatga tgccgcgcac
     5581 atccaaagag gggtaaacat gggtatcgcg cacgggagac ggtccgattt tataaggctg
     5641 cgtattcagc cgttcgttca aatcggtttt gcccgcatcc aatgctttcg caatcacaaa
     5701 cggtttgatt gccgaaccgg gttcgatcat atcggttacg gcacggttgc gccgctgttc
     5761 gctgtctgcc cggccgggcc tgttgggatc gtaggcgggc gtattggcca aggcgaggat
     5821 ttcccccgtg cgggcatcca aaaccaccac cgttccggct tttgcctgat ggtattcgac
     5881 cgccttgttc aactcttcat aggccaaggt ctgaatcctc tgatcgaggg aaaggatgat
     5941 gtctttgccg tttttcgggg ctttattgcg cggggagtcc aagctgtcca caatattgcc
     6001 ctgccggtcc cgcaaaacga cttccgcgcc gtcttcgcca tgcaggctgt cttcaagcga
     6061 aagttccaaa ccttcctgac ctttgccgtc aatatcggta aatccgatga cgtgtgcaaa
     6121 caggttgccc atcgggtaat ggcgttttaa ttctttttca aatacaaagt tttccaaacc
     6181 caaggctttg acctcttcgg caaccttggg atcgagctgc cgcttaatcc agataaacga
     6241 cttgcctttc tgttcgagct tgttcctcaa aacatcaacc ggcacatcga caagctcgga
     6301 caggcgttcc aattgtgcgg cagacggcat ttccttcatc tctttaggca cggcaaacag
     6361 ggactccgtc ggcgcactca acgccaaaac cgcaccgttc cggtccgaaa ccgtaccgcg
     6421 tgtagccggc aatgtttgag tccgcacaat ccggttgtcg ccctgttctt tcaaaaagtt
     6481 atacgttacc gtctgcagat acagtccgcg agcaatcaga ccggcaaaca agaccgctat
     6541 tgccatcagg acgaagctga tccgtccgtt actggtcatc ggctttttga cctgctcttc
     6601 tttgggcagc atccgaggct tatattcgct cttaatcaac atttttactt ctcgttatta
     6661 ttatcctgac gcaggaatcc gattccggca cacaggctgc ttctatcttt gatgcgccac
     6721 cataaaggta ttgcccgaaa ccggcggatg gaggttttgt ttttctgccg ccgccctgat
     6781 cgcttcgtgg ttcgccaaac gcgcctgttg cagcctcatt tgcgcataat cctgctccaa
     6841 ggcgatttcc tgttttttcg ccttgtccaa agctgtgaag ttgagcctgt actggttttg
     6901 ctgcatcaca acggaaaaag cggaaacgca caccgcaagc agcagaagga aattcaattt
     6961 gttcattgcc attcagacgt ttttctctgt gattgttccg gtatcgaacc ggcagtccgc
     7021 tccgccacac gcaaaaccgc acttctcgcc ctcggattgg cggcaatttc cgcctcaccc
     7081 ggctttaatg ccctgcccac gattttcagg ggcggctcgg gcaaatccgc ttccctgacc
     7141 gccgcccagc gcggcagggg cgcgtgttgc gaatattttt tgacaaactg cttcacaatg
     7201 cggtcttcca acgaatggaa agcaatgacc gccaaacgtc cgccctcttt cagacgacac
     7261 atgacctgcg gcaatactgc ccctacttct tcaagctcgc ggttaataaa gatgcggacc
     7321 gcctggaagg tgcgcgtcgc aggatcctgc ccccgctcgc gagtacggac gttttgtgcc
     7381 acgatctgcg ccagcttgcg ggttgtatcg attggacttt ccgcccgttg cgcaacaatg
     7441 gcgcgcgcaa tctggcggct aaaccgctct tcaccataat tcttgattac ctcgtgcaaa
     7501 tcctgttccg acgcaaccgc tatccactct gcggcagaca taccgcgcgt cgtatccata
     7561 cgcatatcca aaggggcatc gaaacggaag ctgaaaccgc ggctgccgtc atcgatttgc
     7621 ggggacgaaa tccccaaatc aaacagcgca ccgtccacct tgccgatacc caaaccgtcc
     7681 aatgccgtct gaaacgaagc aaaaccgcca tgcacgacac cgacccgttt gtccgaacgc
     7741 gccagctctt ctgccacagc aatcgcctga gggtctttgt cgaaaacaat caaccgcccc
     7801 gcatcgccca aacgcgacaa aatcagccgg gaatgccctc ccctgccgaa cgtaccgtcc
     7861 acatagacac cgtcttcgcg cacggcaagc gcatccaccg cctcattcag caagaccgtg
     7921 atatgccggt aactttctgc tccactcaca attgcaaatc cgtctgaccc aactggaagg
     7981 caagttcgtc aggatcgtca tccaaagcct gaaccatctc agcctcccac tgctcgcgac
     8041 cccaaagctc caaacggttg gcacgaccga ccaaaacgac ttcacggtcg aaatccaccc
     8101 ttttcctcag tccggcagga agcagcaccc ggccggcgct gtcccattcc aaaatttccg
     8161 cgttatgcag caaaagattt tgaaaccgcc gcaaaacagg gttatccgcc acttttaagt
     8221 ttaaaagttg cgccgcaacc ttttcccact ccgcaacagg gtacatcaac agcttgtgtt
     8281 tcgactcgag cgttaccact acggcaggcg tatagaggcg cgacagaatg tcacggaatt
     8341 tggcaggaac agccaaccgc cccttactgt cgatgcttaa ttcgtgtgcg ccgccgaaca
     8401 tgacatgtcc caagccgaaa tcaaaatcac aagggtaaaa gagacacttt gccccacaat
     8461 tccccaccaa tcgacactat aagaaatttt aaacactcgg tcaaatcagg gcatgaaaac
     8521 tcattaacat atctgaaatt tttattcctt ttaaaaacaa taagataaaa aatgacgaca
     8581 acggcacggc gggtgcggta cagaataatc gaaccaataa acaactatat atgattaatt
     8641 taataatata aacacaatat atagtattaa gataaagcca tgacagcacc cgtaccaacg
     8701 tgtaatatgt cgggaaatcc aataaattta cacaagctaa cacttatcat gcccctcccc
     8761 ctcccctctc ccgaagcacg gcaattctcg ctcaaactgc aaaccctcat tgccgaagaa
     8821 atcggcaaac acggcaactg gattccattt tcacgtttta tggaattggt tttatacgct
     8881 ccgcaatacg gctactacac cggcggcagc cataaaatcg gcaataccgg ggattttatt
     8941 accgcaccga ccctcacctc tctgtttgca cagacactgg cacgccaact tcaagaactt
     9001 ctatcccaaa cggcgggcaa tatctatgaa ttcggcgcgg gaaccggaca gcttgccgcc
     9061 gatttgttgg gcagcatttc ggacggcatc agccgttact atattattga aatatcgccg
     9121 gagctggcag cacgtcagaa aaacctgatt caagcacgcg caccggaagc atctcaaaaa
     9181 gttgtccact tgaccgcact tcccgaagcg tttgacggca tcatcatcgg caacgaagta
     9241 ctcgatgcca tgcctgtcga aatcgtccgt aaaaatgaag gcggctcatt cgagcatgtc
     9301 ggcgtttgcc tagataatga ccgttttacc tattcggcac gaccgctgca cgacttacag
     9361 ctatctgcct tggcttccct ctattttcct caaacagatt atccctacac cagcgaacta
     9421 catccgcaac aatatgcctt tatccgcacc cttgcctcaa ggcttgaacg cggaggtatg
     9481 atattcatcg actacggttt tgatgcagcg cagtattacc accctcaacg caatcaaggt
     9541 actctgatcg gacactaccg acatcacgtt atccacaatc cttttgactt catcgggttg
     9601 gccgacctga ccgcgcatgt caactttacc gacattgccc aagccggtac ggatgcagga
     9661 ctggatttga caggctatct gccccagtcc cattttctgc tgaatctggg cataaccgaa
     9721 ctgttggcac aagtgggaaa aacagactcg cccgcctaca tccgtgaagc tgctgccgtt
     9781 cagaaactga ttgaccagca tgaaatggga gaattgttta aagtcatcgc attcggtaaa
     9841 aatatcggcg tcgactgggc aggattccgc ttcggcgaca tctgccacaa actctaaccc
     9901 tcatgccgcc tgaatccgct tcagacgaca taaacttttt aacatttaaa aacagtcaac
     9961 taattcaaaa ttaaaaaata cggcttgtca aaaaaacaga aaaacatata atagtgtctt
    10021 cacgaaacgg cgaattagct cagtcggtta gagcagagga atcataatcc ttgtgtccgg
    10081 ggttcgaatc cctgattcgc caccaaattt tcgggggtat agctcagttg gtagagcgct
    10141 tgcatggcat gcaagaggtc agcggttcga tcccgcttac ctccaccaga taaaaaagca
    10201 cagaccgtaa aaaggtatgt gcttttttat tacctgattg ccgggaaata aagaacaaac
    10261 cactgccttc aaaacaggca atcgacttta aacctatcgc cccgcctgtc ctgattttat
    10321 agtgaattaa atttaaaccg gtacagcgtt ggctcgcctt gccgtactat ctgtactgtc
    10381 tgcggcttcg tcgccttgtc ctgatttttg ttaattcact atatcagccc gccagacaaa
    10441 cccgacccga ataatgtctt caggtcgggt ttatggtttc attcccaact tatccagccc
    10501 gacaaccaca atattatgat gacgatgccg aaaacaatgc ggtaataggc aaacgggata
    10561 tagtttttct tggaaacaaa cttcagcagt gctttgaccg ctactaaacc ggaaacaaaa
    10621 gcggcaataa agcctatcag aatcaaaccg acatcatgca gggtgaaaaa ccggtaatgt
    10681 ttcaggacat cataagccgt tgcggcaacc atcatcggaa cggccaagaa aaatgaaaac
    10741 tccgttgccg ttttccgctc gattccccaa agcatcccgc ccataatcgt actacccgaa
    10801 cgggacgtac ccggaaccag tgcaaacact tgggcaacgc cgatcatcaa cgcatcaatc
    10861 ggacgcaatg catcaacatc ggcaatttta ggctctgccc ggctttggcg tttctccacc
    10921 cacaaaataa aaaaaccgcc caaaaccagc atgaccgcca cactcaaagg attgaacaga
    10981 tgttctttaa tctgtttgcc gaacaacagc cccatcacgg cggcaggtat aaaagcaatg
    11041 gcaagattga ggacgaagcg gttggctttc cggtcttttc ccacgccatg caacacattg
    11101 ctgaaacgct gccggtattc aaacactacc gccaaaactg caccgagctg gatggcaatt
    11161 tcaaaaacct tgtgattgct gtgaaaatca atcagattgc cgaacacaat caaatgtccg
    11221 gtgctggaaa tcggtaaaaa ttcggtaaaa ccttctacca agcccatcat cagggctttc
    11281 aggacaatca gaaaatccat tgcttgcgct tctttcggat acgggagttc ggctatttct
    11341 gtacagcagg ggtctgacgc ttgcgttctt ccctgacttt ggcaaccaat tctttaatcg
    11401 tatgaacgcc gccgtcaaag ccattattga agataacgcg gtattttccg ccgacaataa
    11461 cggtcggcgt gctgtcaata ccgtattgtt ccgtcagttt ctgcattttt aatgcggcgg
    11521 cggcagcttc gggggaatca taggcgcgca tcagtttttt gccgtcaaag cctttttgag
    11581 acaaagccca ttttccggca acagccctgt tttccaagcg gattttttgt tcgtaaactg
    11641 ctttaaacac agcagggttt gcctgatatt tcaaacccga caaattgacg gcagccgcca
    11701 tcctggccag accgagcatt tcaggctgcc agaccacgtg ctccgtcctc aaataggcat
    11761 cagacggcaa tgccttgccc aatttcaata acaaaggatc gaaatgatgg caatgtacgc
    11821 agaaatagcc gaaaaattcc aaaacctcaa ttttgcccga ctgttcttga ggaatgggtt
    11881 tatccaacac aagatagtct tccctttccg tcagggcata tgcctgcgcg gacaacactg
    11941 ccgacagcag cagcggcaac agatgtttga gcttcataat tatttgcttt cgatagaacg
    12001 gatcaggctg gcgacttcat gttttttcaa ctcgtcctgc atttttttca ccgcatcggc
    12061 agacatattg ccgctttgca cccggtaaag cgttttatgt cccgcctgat aaccgaccac
    12121 cttggaagat atgcccaaga ttgccagttt ggcacgctgt ccttccgcgc tccggcggtc
    12181 ggcatacgcg cccatttgca gataatgcgt tgcttccgcc ttgtcgggcg ttttcatttt
    12241 ctgcacttct ttggcagcgg cactgcgcgc tttttcgatg ctgccgctgt tgaggatttg
    12301 ttccggggtc ggtttgggtg caactttttc cttctccgcc tttttctctt cttttgaagc
    12361 ttttttctct gtttctttag atggttttac cgcttgtttt ttaaccgttt cggcatcttt
    12421 cttctgcgct ttttccccga cggtttgttc acgctcttcc gtcagtgctt tcttgcgcac
    12481 tgcctgtccg tccgactttt cccgctccgg ctcgtccgcc ttttcctcaa cctcgtcggc
    12541 tttatcggca gctttttccg catccgactg ctctgcctct ttcgcagcat ccggttcgga
    12601 caaggcgttt tgatcggccg gttcaggttg gatgtcttcc ttaggctggt ttttcggttt
    12661 caggatttcc gtttctgcag gctgcttcga cggaaccggg attttgaacg cattttgacc
    12721 gctctggttc agataaaaca aaataccggc aataatgacc gtcgccagta tcaaaccgaa
    12781 gaaaaaaccg gacagacctt ttccggattg ggaaaatttg ttcataaaca taccttaatg
    12841 tgtttcagac ggcattaacg ccgtttgctt acgggcggat attctaacaa tatcgccata
    12901 tttgggcaaa acctgcttcc attcccgttc ctataaagcg cggcggaaac ctatggcttt
    12961 catgacgtgg cttctgccga cttcttcgtc gcccgccaaa tccgccaatg tacgcgccac
    13021 gcgcatgatg cggtggaaac tgcgggcgga gagggagagt ttttccagca ggctgcccaa
    13081 tgcttcctgc gcttcttttt ggatgcgggc ttgggaatcg agttcgctga cgctcaaagc
    13141 ggcgttgact ttgccctgcc gtgcgtattg tttgtcgcgg gcggcgataa cgcgttccaa
    13201 aacggacgcg ctgctttcgc ccgcttcctg ctgcatcagt tcgacggcgg acaggctggg
    13261 gacttcgatg gtcaaatcga tgcggtcgag cagcgggccg gaaatcttgc tgcggtaacg
    13321 cgcgacgctt tcgggcgtgc agcggcaggg tttgacggga tgcccgagat aaccgcacgg
    13381 acacgggttc atggcggcga caagttggaa tttggcagga tagacggctt ggcgcgccgc
    13441 gcgggaaatg tggatttcgc cgttttccaa cggttcgcgc aaaacttcca aaactttgcg
    13501 gtcgaactcg ggcaattcgt ccaaaaacaa aacaccgtga tgcgccaatg aaatctcgcc
    13561 cggacgcgga tccgaaccgc cgccgaccat agccgccgcg ctggcgctgt gatgcggact
    13621 gcggaaagga cggttgctgt cgagttgttg ctggtggttg ggcaggagcg aacgcaatgc
    13681 ccaaacttca accaattcgt cttcggtcag cggcggcagg atgccgggca gccgttggga
    13741 gagcatagac ttgcccgttc ccggcggacc catcatcaag aggctgtgtc cgcctgcggc
    13801 agcgatttcc aaagcaaggc gggcagtgtg ctgacccttg acatcgacga ggtcgagcaa
    13861 tttggtgttt tcagacggca tctgaggaac ttgacagtcg gtttgcacca aaggttcgat
    13921 gccgttcaaa tgggcggcga cttcgcccaa agagcgcgcg ccgtaaacgg taatgccgcg
    13981 catcacggcg gcttgtcctg cgttttcttc aggcaaaaca aatgcacgtt ttgcctgcat
    14041 accctgccac gccatcgcca acgcgccgcg cacggggcgc aacagccccg acagtgccaa
    14101 ttcccccgca aactcgtatt ccgccagttt ttcgggcgca acctgccccg atgcggcaag
    14161 gatgccgatt gcaatcggca aatcgaaacg ccccgactct ttgggcaggt cggcgggggc
    14221 gaggttgacg gtaatttttt tggcggggaa ttcaaaaccg ctttgaataa tggcggcacg
    14281 gacgcggtcg cgactttcct ttacttccgt atcgggcagc ccgacgatgt tgaaatgcgg
    14341 caggccgttg gcaaggtggg cttccacttc gaccaacggc gcattcatac cgctcaaggc
    14401 gcggctgtaa accaaggcaa gcgacatatt tcagacggcc ttattcgccg gcttcggttt
    14461 gctgcctgat ttcggcgacg gcttcttcgg cagcggcttc agccgcttcc aatgctgccc
    14521 gttcgggatt ttgcgcggct tcgagttttg ccaaacgcgc ttccaaagcc gccagtttgg
    14581 tacgagtttt gattaaaacc tgctgctgga tgtcgaattc ttcgcgcgta accagatcca
    14641 tacggttgaa cgcgccgccc agcatcgcct taatattttt ttccacatct ttggcagggc
    14701 tgttggcgat ggtttcgctg attttcgaac cgacttcttc aaaaagctgc ttgccgaaca
    14761 taatctgtat ccttcctgaa catatcaaat tcaatcggct attgtataag gaaaaatgcc
    14821 gtctgaaaac gggcggcgga taatcggcaa aacataccgc gcctcctttg cggttgctaa
    14881 attacacctc aaaacacctg ccgcctgaaa acggatttca tattccgcgc aacgccagat
    14941 tacaagacac tacaaaacaa tatactgttt taaatgattt ttccgacgcg catcgtttca
    15001 aactcggctt tttaagccat taagtgcttt gcaaacaaca gaaattgggt tatcctgaaa
    15061 cggattattt acaatttcat atagttttat tacatatctt attgtgattg aagataattt
    15121 atccgaatcc ccctttcggg tatccggatt ttccgttgta cttttattag aaaaacattt
    15181 caggcgcaag ttgcttgcaa tttcaaagcc tgtaattctg aagttttaga cgaggaatag
    15241 cacatgaatc ccatgtacat tacttttgca atctatctgg ttgcagtcct tctcatcggg
    15301 cttgccgcct atttttccac gcgcaatttc gacgattata ttttgggcgg gcgcagccta
    15361 ggcccgtttg ttaccgcgat gtcggcaggc gcgtccgata tgtccggctg gctgctgatg
    15421 ggtctgccgg gcgcgattta cctgagcggt ttgaatgagg cttggattgc catcggcctc
    15481 ttggtcggcg cgtatttcaa ctggctcttg gtggcgggcc gcctgcgcgt gcataccgaa
    15541 tacgccaaca atgcgctgac gctgccggat tatttcttcc accgcttcgg cgcgggcgga
    15601 cacttgatga aagtggtttc cgcactgatt atcctgttct tcttcacgat ttattgcgcc
    15661 tcgggcattg tggcgggcgc aaccctgttc caaagcctgt ttgaaggtat gacttacaat
    15721 caggcaatgt ggctgggcgc gggcgcgacc atcgcctata ccttcttggg cggtttcttg
    15781 gcggtcagct ggacggatac gctgcaggct tctttgatga ttttcgccct gattttaacg
    15841 ccggtgatgg tctatctggg cttgggcggc gcggaacaga tgtctgccgc gattcaaagc
    15901 gtcgccgcag gcacgggcaa agaatacggc agcctgtttg ccggtacgac cgtcatcggc
    15961 atcatttcca ccgccgcatg gggcttgggc tatttcggac agccgcacat tttggcgcgc
    16021 tttatggcgg ccgaaagcgc gaaatcgctg gtatccgcac gccgcatcgg catgacttgg
    16081 atggcgttgt gccttgcggg cgcggtggcg gtcggttatt tcggcattgc gtatttcggt
    16141 gcaaatcccg acaaagtttc ttctatgagc ggcaaccacg aacgcatctt catcgcgctt
    16201 tccaccctgc tgttcaaccc ttggatcgcc ggcatcattt tgagcgcgat tttggcggcg
    16261 gtgatgtcca ccctgtcctg ccagcttttg gtttgctcca gcgcgattac cgaagacttc
    16321 tacaaaggct ttttgcgtaa aaacgcgcaa cagtcggaac tggtatgggt cggccgcctg
    16381 atggtcttgg cgattgccgt gatttccatc ctgattgctt ccgatccgaa cagcaaagta
    16441 ttgggactgg tgtcttacgc gtgggcaggt ttcggtgcgg cattcggccc gattgtgatt
    16501 ctgtccgtat tgtggaaacg catcactgcc tacggcgcgt tgtcgggtat ggttgcaggt
    16561 gccttaaccg tggtcgtatg ggcggaatgg gtgaaaaaac cggctcaagc ggcaggcgaa
    16621 agcggcttgt tgacgatgta cgaaatcgtc ccgggcttta ttgtttgctt gatcgttgcc
    16681 gtgttggttt ccctgttcaa caaagaacct tcgcgcgaaa cccaagaacg ctttgaaaaa
    16741 gccgacgcag attaccgcgc cgcccgataa acccctttca gacggcacgg catcccggtt
    16801 cgtgccgtct gaacccgttt ccgggtcaaa cacaaataaa ccttgcctgc atacaggcct
    16861 tatttgtgtt ttacccgttt cattttcaaa gaaacggaag cacctaccct gcccgcattt
    16921 gaagccttgt atttcatctg cggatttatt acgatattac cgtattcaga ccgcaccgat
    16981 gccgtctgaa ccccccgaaa aactttggag aatccaaaaa atgtttcatt ttgcatttcc
    17041 ggcacaaact gccctgcgcc aagcgataac cgatgcctac cgccgtaatg aaatcgaagc
    17101 cgtacaggat atgttgcaac gtgcacagat gagcgacgaa gagcgcaacg ccgcctccga
    17161 gcttgcccgc cgtttggtta cccaagtccg cgccggccgc accaaagccg gcggcgtgga
    17221 tgcgctgatg cacgagtttt cactctccag cgaagaaggc atcgcgctga tgtgtctggc
    17281 agaagccctg ctgcgtatcc ccgacaacgc cacgcgcgac cgcctgattg ccgacaagat
    17341 ttcagacggc aactggaaaa gccatttgaa caacagccct tccctcttcg tcaacgccgc
    17401 cgcctggggc ctgctgatta ccggcaaact gaccgccaca aacgacagac aaatgagttc
    17461 cgcactcagc cgcctgatca gcaaaggcgg cgcaccgctc atccgccaag gcgtaaatta
    17521 cgccatgcgc ctgttgggca aacagttcgt aaccggacag accattgaag aagccctgca
    17581 aaacggcaaa gaacgcgaaa aaatgggcta ccgcttctcc ttcgatatgt tgggcgaagc
    17641 cgcctacacc caagccgatg ccgaccgcta ctaccgcgac tatgtcgaag ccatccacgc
    17701 catcggcaaa gatgcggcag gacaaggcgt ttacgaaggc aacggcattt ccgtcaaact
    17761 ctccgccata catccgcgct actcgcgcgc ccaacacggc cgtgtgatgg gcgaactgtt
    17821 gccgcgcctg aaagagctgt tccttttggg taaaaaatac gatatcggta tcaacatcga
    17881 tgccgaagaa gccaaccgtc tggagctgtc tttggatttg atggaggcac tcgtttccga
    17941 tcccgatttg gcaggctaca aaggcatcgg tttcgttgtc caagcctacc aaaaacgttg
    18001 tccgttcgtt atcgactacc tgatcgacct tgcccgccgc aacaaccaaa aactaatgat
    18061 ccgcctcgtc aaaggcgcgt attgggacag cgaaatcaaa tgggcgcaag tggacggctt
    18121 gaacggctat ccgacctaca cccgcaaagt ccacaccgac atctcctacc tcgcctgcgc
    18181 gcgcaaactg ctttccgcgc aagacgcggt atttccgcaa ttcgccaccc acaacgccta
    18241 caccttgggc gcaatctacc aaatgggcaa aggcaaagac tttgaacacc aatgtctgca
    18301 cggcatgggc gaaaccctgt acgaccaagt cgtcggcccg caaaacttag gccgccgcgt
    18361 gcgcgtgtac gccccggtcg gcacacacga aaccctgctc gcctacttgg tgcgccgcct
    18421 gttggaaaac ggcgcgaact cgtctttcgt caaccaaatc gtcgatgaaa acatcagcat
    18481 cgacacgctc atccgcagcc cgttcgacac catcgccgaa caaggcatcc acctgcacaa
    18541 cgccctgccg ctgccgcgcg atttgtacgg caaatgccgt ctgaactcgc aaggcgtgga
    18601 cttgagcaac gaaaacgtat tgcagcagct tcaagaacag atgaacaaag ccgccgcgca
    18661 agacttccac gccgcatcca tcgtcaacgg caaagcccgc gatgtcggcg aagcgcaacc
    18721 gattaaaaac cctgccgacc acgacgacat cgtcggcaca gtcagctttg ccgatgccgc
    18781 gcttgcccaa gaagcggttg gcgcagccgt tgccgcgttc cccgaatgga gtgcgacacc
    18841 tgccgccgaa cgcgccgcct gcctgcgccg tttcgccgac ctgctcgaac agcacacccc
    18901 cgcgctgatg atgcttgccg tgcgcgaagc aggcaaaacg ctgaacaacg ccattgccga
    18961 agtgcgcgaa gccgtcgatt tctgccgcta ctacgcaaac gaagccgaac ataccctgcc
    19021 tcaagacgca aaagccgtcg gcgcgattgt cgccatcagc ccgtggaact tcccgctcgc
    19081 catctttacc ggcgaagtcg tttccgcatt ggcggcaggc aacaccgtca tcgccaaacc
    19141 cgccgaacaa accagcctga ttgccggtta tgccgtttcc ctcatgcacg aagccggcat
    19201 cccgacttcc gccctgcaac tcgtcctcgg cgcaggcgac gtgggtgcgg cattgaccaa
    19261 cgatgcccgc atcggcggcg tgattttcac cggctcgacc gaagtggcgc gcctgatcaa
    19321 caaagccctt gccaaacgcg gcgacaatcc cgtcctgatt gccgaaaccg gcggacaaaa
    19381 cgccatgatt gtcgattcca ccgcacttgc cgaacaagtc tgcgccgacg tattgaactc
    19441 cgccttcgac agcgcgggac aacgctgctc cgccctgcgt atcttgtgcg tccaagaaga
    19501 cgttgccgac cgtatgctcg acatgatcaa aggcgcgatg gacgaactcg tcgtcggcaa
    19561 accgattcag ctcactaccg atgtcggccc cgtcatcgat gccgaagcac agcaaaacct
    19621 gttgaaccac atcaacaaaa tgaaaggcgt tgccaagtct taccacgaag tcaaaaccgc
    19681 tgccgatgtc gattccgaaa aatccacgtt cgtccgcccc atcctgtttg aattgaacaa
    19741 cctcaacgaa ctgcaacgcg aagtcttcgg tcccgtcctg cacgtcgtcc gctaccgcgc
    19801 cgacaaactc gacagcgtca tcgaccaaat caacagcaaa ggctacgccc tgacccacgg
    19861 cgtacacagc cgcatcgaag gcacagtacg ccacatccgc agccgcatcg aagccggcaa
    19921 cgtttacgtc aaccgcaaca tcgtcggcgc agtcgtcggc gtacagccct tcggcggaca
    19981 cggtctgtcc ggcacaggcc ccaaagcagg cggttcgttc tacctgcaaa aactgacccg
    20041 catccccgaa tgggttgccc cgaccctgag ccaaatcgga caggcagacg aagccgcgct
    20101 caaacgcctc gaagcactgg ttcacaaact gccgttcaac gccgaagaga aaaaagccgc
    20161 agcggccgct ttgggacacg cccgcatccg caccctgcgc cgtgccgaaa ccgtccttac
    20221 cggcccgacc ggcgagcgca acagcatctc atggcacgcg ccaaaacgcg tctgggtaca
    20281 cggcggcagc ctcctgcaag ccttctgcgc cctaaccgaa cttgccgcct ccggcgtaca
    20341 ggcagtggtc gaacccgaca gcccgctggc ttcctacacc gccgacttgg aaggtctgct
    20401 gctggtcaac ggcaaacccg aaaccgccga catcagccac gttgccgccc tgtcgccttt
    20461 ggacagcgcg cgcaaacagg aacttgccgc ccacgacggc gcactcatcc gcatcctccc
    20521 ttcggaaaac ggactcgaca tcctgcaagt gtttgaagaa atctcttgca gcgtcaacac
    20581 cacagccgcc ggcggcaacg ccagcctgat ggcggttgcc gactgatttt accgaaatcc
    20641 ccgagcgcgg cccgtgaacc aatgccgtct gaaaaccttt cagacggcat
//
LOCUS       DAWEYF010000021        20370 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.021, whole genome shotgun sequence.
ACCESSION   DAWEYF010000021 DAWEYF010000000
VERSION     DAWEYF010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20370
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.021"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(142..2748)
                     /gene="acnD"
                     /locus_tag="WGN93_000530"
     CDS             complement(142..2748)
                     /gene="acnD"
                     /locus_tag="WGN93_000530"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ0226469.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNRQIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRRPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGREIRLKDIWPT
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGKAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSLARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVIGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            complement(2826..3614)
                     /locus_tag="WGN93_000531"
     CDS             complement(2826..3614)
                     /locus_tag="WGN93_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEZ0226470.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPILLIFVALYFVFSPKLDGSKEGKARISFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIISMF"
     gene            complement(3620..4273)
                     /locus_tag="WGN93_000532"
     CDS             complement(3620..4273)
                     /locus_tag="WGN93_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ0226471.1"
                     /translation="MRLVGNFKGGGATKLENEDVSKVDKSSHSGIALGAHTEAPYHAA
                     TKIFNNHSPAPSSLVLTARYNPLSEPTTVIPLQPILEKLHYLDLLALTTENFDFTRSE
                     TFTSGKGTGGSKVSILEFNNDGTIGVKYNSYRFTTNVHAPQSVKDALNRFNELINNSE
                     QYKINLQPNTCMIINNTLALHCRDVIQDNRRLLIRIFGYKNNIEYISLEDDPVLAQG"
     gene            complement(4490..4672)
                     /locus_tag="WGN93_000533"
     CDS             complement(4490..4672)
                     /locus_tag="WGN93_000533"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226472.1"
                     /translation="MDKFQSIINLTADAALFVQNKATEIATIGGCQAKGVREIASNAG
                     KTLLEKYLNSEQKDEI"
     gene            complement(4805..5959)
                     /gene="prpC"
                     /locus_tag="WGN93_000534"
     CDS             complement(4805..5959)
                     /gene="prpC"
                     /locus_tag="WGN93_000534"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ0226473.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTELCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSLLLYWYQYSHNGKRIEVES
                     DEETIGGHFLHLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            complement(6044..6919)
                     /gene="prpB"
                     /locus_tag="WGN93_000535"
     CDS             complement(6044..6919)
                     /gene="prpB"
                     /locus_tag="WGN93_000535"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ0226474.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDTMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            complement(7545..8855)
                     /locus_tag="WGN93_000536"
     CDS             complement(7545..8855)
                     /locus_tag="WGN93_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ0226475.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            complement(8994..10172)
                     /gene="ftsZ"
                     /locus_tag="WGN93_000537"
     CDS             complement(8994..10172)
                     /gene="ftsZ"
                     /locus_tag="WGN93_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ0226476.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(10291..11535)
                     /gene="ftsA"
                     /locus_tag="WGN93_000538"
     CDS             complement(10291..11535)
                     /gene="ftsA"
                     /locus_tag="WGN93_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ0226477.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVTSCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            complement(11621..12349)
                     /locus_tag="WGN93_000539"
     CDS             complement(11621..12349)
                     /locus_tag="WGN93_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ0226478.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYAYDGLPEKESEE"
     gene            complement(12339..13253)
                     /locus_tag="WGN93_000540"
     CDS             complement(12339..13253)
                     /locus_tag="WGN93_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ0226479.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRNDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTGH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            complement(13366..14775)
                     /locus_tag="WGN93_000541"
     CDS             complement(13366..14775)
                     /locus_tag="WGN93_000541"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ0226480.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGANVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            complement(14929..15996)
                     /gene="murG"
                     /locus_tag="WGN93_000542"
     CDS             complement(14929..15996)
                     /gene="murG"
                     /locus_tag="WGN93_000542"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ0226481.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(16000..17325)
                     /locus_tag="WGN93_000543"
     CDS             complement(16000..17325)
                     /locus_tag="WGN93_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ0226482.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(17451..18788)
                     /locus_tag="WGN93_000544"
     CDS             complement(17451..18788)
                     /locus_tag="WGN93_000544"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ0226483.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATKDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGKKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(18878..19150)
                     /locus_tag="WGN93_000545"
     CDS             complement(18878..19150)
                     /locus_tag="WGN93_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ0226484.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            complement(19265..20347)
                     /locus_tag="WGN93_000546"
     CDS             complement(19265..20347)
                     /locus_tag="WGN93_000546"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ0226485.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIASLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYA
                     SGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         4946 a         5515 c         5043 g         4866 t
ORIGIN      
        1 aaggtttcct caattccact ttctggattc ccgcctgcgc gggaatgacg atttacagta
       61 gatgcctgcc atatcgagaa ttacgtgaat gagcaaaatg ttgaacccga cccacgctac
      121 gtcttgcttt tcagacgacc tctaagccgc gttcccttcc aaaaaatcct gtgcaaaccg
      181 ttgcaacacg ccgccggctt catataccaa tacttcttct gcagtatcga ggcggcaggt
      241 aacgggaact tcgacggttt ctccgttttt acggtgaatc acgagggtca ggtcgcagcg
      301 cggtgtacgt tcgccgataa cgtcgtaggt ttccgtgccg tccagttgca gggtgtggcg
      361 gttggtgccg ggtttgaatt gcagcggcaa gacgcccatg ccgatgagat tggtgcggtg
      421 gatgcgctcg aaaccttcgg cggcgatggc ttccactccc gcgagccgca cgcccttcgc
      481 cgcccagtcg cggcttgagc cttgaccata gtccgcaccg gcaatgatga tgagcggctg
      541 tttgcggttc atataggttt cgatggcttc ccacatgcgc atggtttcgc cttcgggttc
      601 gacgcgggcg agcgagcctt ggcgcacgct gccgtcttcg tttttcacca tttcgttaaa
      661 cagtttcgga ttggcgaagg tagcgcgttg ggcggtcaag tggtcgccgc ggtgggttgc
      721 gtaagagttg aagtcttctt caggcaaacc cattttcgcc aaatactcgc ctgcggcact
      781 gacggccaaa atcgcattgg acggcgagag gtggtcggtg gtgatgttgt cgggcaaaat
      841 cgccagcgga cgcatacctc ttaatgtgcg ttcccctgcc agcgcgcctt cccagtaagg
      901 cgggcggcgg atgtaggtgg acatcggacg ccagtcgtat agcgggcttg gggctttttg
      961 cgctttgccg gtgtcgaaca tcggtacata cacatcgcgg aactgctgcg gtttcacata
     1021 ttcagcaacg acggcatcga tttcttcgtc ggtcggccag atgtctttca ggcggatttc
     1081 gcggccgtct gcaacgccga gtacatcgtt ttcaatatcg aaacggatgc tgcctgccag
     1141 cgcgtaagca acgaccaacg ggggcgaagc gaggaaagcc tgtttcgcat acggatgaat
     1201 acggccgtcg aagttgcggt tgcctgacag tacggcggtg gcgtacaaat cgcggtcgat
     1261 gatttctttc tggattttcg ggtcgagcgc gccgctcatg ccgttacagg tggtacatgc
     1321 gaaggcaacg ataccgaagc cgagtttttc catttcaggc agcaggcctg cttctttcaa
     1381 atagatttcg gctacttttg aacccggggc aaacgaagat ttcacccaag gtttgcgttg
     1441 caagccgagg cggttggcat tgcgtgccaa cagcgcagcg gcgacaacgt tgcgcggatt
     1501 ggaagtattg gtacacgaag taatcgcggc aataatcact gcaccgtcag gcatttggcc
     1561 gtctgaaggc tcttcgtaag gcttcgccag ccctttcgcc gccaaatcgg cggtcgcaaa
     1621 acgggcatgc gggttacttg ggcctgccat attgcgcgtt acgctgctca aatcaaattt
     1681 caaaacgcgc ggataaacgg cggttttcaa ggcatctgcc cataagcctg cggttttggc
     1741 gtaggtttcc accaatttca cctgcgcgtc gtcgcgtccg gtcagtttca aataatcaat
     1801 ggtttgctca tcaatagcga acatcgcggc agtcgcgccg aattcagggg tcatattgga
     1861 aatagttgcg cggtcgccga tggacaggct tctcgcacct tcgccgaaga attcgacaaa
     1921 tgccccgacc acgcgttctt tgcgcaagaa ctcagtcagt gccaacacga tgtcggtggc
     1981 agtaatgccc ggccggcgtt tgccggtcag ctcaacgccg acaatatcgg gcaggcgcat
     2041 catggacgcg cgtcccagca ttacggtttc cgcttccaat ccgcccacgc ccacggaaat
     2101 cacgcccaat gaatcgacgt gcggcgtatg tgagtcagta ccgacgcagg tatcggggaa
     2161 cgccacgccg tttttgactt ggacgacggg cgacattttt tctagattga tttggtgcat
     2221 gatgccgttg cccgccggaa tcacgtccac attttcaaat gcggtttttg tccagttgat
     2281 gaagtggaaa cggtcttcgt tacgtctgtc ttcgatttgg cggtttttgc ggaaggcatc
     2341 ggggtcgtag ccgccgcatt caacggccag agagtggtcg acgatgagct gggtttgcac
     2401 caccggattc actttggcag gatcgccgcc tttttcggca atcgcatcgc gcagacctgc
     2461 caaatccacc aacgcggtct gccccagaat atcgtggcac accacccgcg ccggatacca
     2521 aggaaagtcg atttcctgtt ttccctcaat cagctgaccc agccagcttt gcagcgtcgg
     2581 caaatcgact ttgtccgcgc ggttgaccaa attctccgcc aaaatgcggc tcgtgtaagg
     2641 cagcttgtcg taagagccgg gcttgatgtc ctcacacgcc gcacgcgcgt cgtagtattc
     2701 caaatccgta ccgggcagcg gtttgcggta acgttggttg gcagccatgt cggttctcct
     2761 ggggatctgt ttttcttgtg gtttgaggtt tcagccgacg ttttgaaggg gtcgtctgaa
     2821 agggtttaaa acatcgaaat aatcatctga tacagcggat ttctctcgtc tatcaacaat
     2881 ttcacagcca tcgaaatgct gatgacaatc agcagcggct taatcagctt cgaaccgaag
     2941 cggacggcaa atctcgcacc taaattcgca ccgacaaacg caccgaccgc catcgttgcc
     3001 gcaatcggga aaataatcga accgtgcagc aggaataccg atagcgaacc aagattgcag
     3061 gcaacgttcg ccaatttggt gtaagacatc gcgttcaaca gcttgcagcc gagcaaaaca
     3121 ataaaggcaa tcagaaaaaa cgagccgaca cccggtccga acacaccgtc gtaaaaaccc
     3181 aaaagcggtg caaccgtcag cccgaataga aaaaaagata ttctggcttt gccttcctta
     3241 ctgccgtcga gcttgggcga aaacacaaaa tacagcgcga caaatatcaa caaaatcggc
     3301 acgaccgcca gcagaatatc tttggaaacc aagctgaccg ataatgcacc gaccacgccg
     3361 cctgcaaacg atgctgccgc aatcgggaga cctttcttcc aatcaatcaa acctttgcgt
     3421 gcaaaagaaa ccgtagccga aaacgtagca gcggctgctt gcagcttgtt ggtggcaatt
     3481 gccgacacgg gaggaatacc tgccaacaag agtgcaggca gcgtaatcaa accaccccca
     3541 cccgcaatcg catcgataaa tccggcaatc atcgcaacca aacccaaagc gagtattata
     3601 tataaatctt ccatgtttct tatccttgag ccaatacagg atcatcttct aaagaaatat
     3661 actcaatatt atttttatat ccaaaaatac gaattaacaa tcttctgtta tcttgaataa
     3721 catcacggca atgcaaagcc aacgtgttgt taatgatcat acaagtgttt ggttgtaagt
     3781 tgattttata ttgttcagag ttgttgatta attcattaaa tctattcaaa gcatctttaa
     3841 ccgattgggg tgcatgcaca ttagtagtaa atctataaga gttatattta acaccaatag
     3901 ttccatcgtt attaaattca agtatagata ctttacttcc ccctgttcct tttcctgacg
     3961 taaacgtctc actacgagta aagtcaaaat tttctgtcgt taatgccaat aaatccaaat
     4021 aatgcaactt ttccaaaata ggttgtaatg gaattactgt tgtcggttct gatagcggat
     4081 tgtatcttgc agttaaaaca agagatgatg gtgcggggga gtgattatta aaaatctttg
     4141 ttgccgcatg gtaaggagct tcagtatgcg cccctaatgc aattcctgaa tgtgaacttt
     4201 tatctacttt gctaacatct tcattttcaa gttttgttgc tccacctccc ttgaaattac
     4261 caacaagtct cattattttc ccatgattat caatattata agcaaatgca aattgctcta
     4321 ctgttgccaa taaaatctga ttagatgcag ccaatttcaa acattctaag ttttcttcaa
     4381 gctcttccat ttttggtaaa gaacttggaa tgctaattat tgaattatca atgtttttat
     4441 cataaagatt attaaaaata actacacaag ttttttgatg aatgaatttc tagatttcat
     4501 ccttttgttc tgagtttaaa tatttttcca ataaggtttt ccctgcatta cttgcaattt
     4561 ctcttactcc ctttgcttga cagccaccta ttgttgcgat ttccgttgct ttattttgaa
     4621 caaacaaagc agcatcagca gttaaattaa taattgattg aaacttatcc atttaataca
     4681 tacccttttt attaggttaa atttttaaac ttatttcaga caacctttcc aataaggcaa
     4741 ggtcgtctga aatcctcagc tttgcatacc gaaataaaga acaaactgct attgcattct
     4801 tcaattatcg ttcttcaatc tccacaaacg ccaaatcttc tggacctgtg tagtttgcgc
     4861 tcggacggat gattttgccg tctttgcgtt gctcgagaac gtgtgcgctc caaccggttg
     4921 tacgggaaat tacgaacagc ggtgtgaaca tagcggtcgg tacgcccaat ttttggtagg
     4981 aaacggcaga gaaccagtcc agattcggga acattttttt ctcttcccac atcacgcttt
     5041 ccaaacgttc ggcaatgtca aagaggcgca tatcgccggt ttctttgctc aaaccgcgtg
     5101 ccacttcttt aatgacaacg ttgcgagggt cggaaatggt gtacaccgga tgaccgaaac
     5161 cgatcacgat ttctttgcgg ccgatgcgtt cgcggatgtc ggcttcggct tcgtcggcat
     5221 tgcggtagcg tttttgaata tcgtaagcca cttcgttcgc gccgccgtgt ttcggacctt
     5281 tcaacgcgcc gattgctccg gtaatgctgg agtacatatc agagcctgta ccggcgatca
     5341 cgcgggcggt aaaggtagaa gcgttgaact cgtgttcggc atacagaatc agtgaaacgt
     5401 gcatggcttt gatgtgtgat tcgcttgggc gtttgccgtg caacaggtgc aggaaatgac
     5461 cgccgatggt ctcttcgtcg ctttcaactt caatgcgttt gccgttgtgt gaatattgat
     5521 accagtacag caggaggctg ccgaggctgg caatcagttt gtcggcgatg tcgcgcgctt
     5581 cactttccgg atggctttca cgttcaggat gaacgcagcc cagcatggat acgccggtac
     5641 gcatcacgtc catcggatgg gtatgtgcag gcaggctttc caaaacttta atcacacgga
     5701 taggcaggcc gcgcatggat ttgagcttgg ctttataagc ggccaactcg aatttattgg
     5761 gcaaatgacc gtgaatcagc aggtgggcaa cttcttcaaa ctcgcatttt tgtgccaaat
     5821 ccaagatgtc gtaaccgcga tagctcaaat cgttgccggt acggccaacg gtacacaatt
     5881 cggtattacc ggccgcaacg ccagaaagcg caacggattt tttaggtttg aaagtcgggg
     5941 tttgagtagt ttcagtcatg gtatttctcc tttgtatttt tatgggtttt atttttcaga
     6001 cggccgatgc ggatttgttg aaaggccgtc tgaaagcggt aaatcatttt tgaaacaatt
     6061 tatccagttt ttgctcgaag gcatgatagt tcagatgctc gtacaattcg gcacgggttt
     6121 gcatagtgtc aactactgcg gcctgagtgc catcgcgcat aatcgcttcg taaacattca
     6181 gagcggcttt gcttgctgca cggaacgatg acagcggata cagcaccagc gacacgccgt
     6241 tttcagccag ctcgctttgg gtataaagcg gagtggaacc aaactcggta atgttcgcca
     6301 acacgggcac tttcaccgca tctgcaaatt ggcggtacat gttcaaatcg gtcatggctt
     6361 cagggaaaat catgtccgca ccggcttcga cacaagcttg ggcgcgttcg atagcggcat
     6421 ccaaaccttc taccgccagc gcatcggtac gcgccataat cacgaagttc tcatcaacgc
     6481 gcgcatctac ggcagctttg atacggtcga ccatttcatc tttagataca atggctttgt
     6541 tcggacggtg gccgcagcgt ttttgcgcta cctgatcttc gatgtgaacc gctgcaacac
     6601 cggcgcgttc aaagttgcga atggtacggg caatattgaa tgcaccgccc caacccacat
     6661 cgatgtccac cagcagaggc gtatccacgt tgtccgtaat gcgtcgtgcg tcgatcagca
     6721 catcttccat tgtggtaatg cccaaatcag ggataccgca agaacaggct gccacgccgc
     6781 cgccggacag atagatggct ttgaaaccgc tttgggtggc caatcgtgca aaataagcat
     6841 tgacgcaacc ggcgacggca agcggattcg attctttcac ggcttggcgg aaacgtgctc
     6901 cggcagagtg ttgactcatc atatttctcc tttatagact ttttttcagt atggacaggc
     6961 ttccatcaca ttcggacggc aaaacacagc catccgacgc gtcgggcatc ccaatccaat
     7021 cattaaaaat atatgggaaa aattatctta ttgatattta aaacgaatca aagaaaaaca
     7081 gcagaccgtt cggaattatg cggcaaaacc gcagacaaga agaaaacaag gggattattc
     7141 agaaaagggg aaaacatctg aattggtttc atagtaatgt tcctttgtag tgttatgtag
     7201 ttttattttt cgataatcta aaacacaaga ctgaaaatgt caaacatttt taaggagact
     7261 cattacataa ttttaatatt ttattttaat tccatgatta aactagatta attttgaatt
     7321 atttgtttca ataaaattgt caggaaatca agaaaaattt tcgataatca aaatcctgaa
     7381 aacttataaa atattttata cataaaaaca atgtattatt tttaagcaat ccgatgtatt
     7441 ttattatgta tttgattttt atataattta ataaaaatta aatatatcgg caaacaaaat
     7501 gccgtctgaa aacctttcag acggcatttt taatatcgaa tcaatcagcc caaataccag
     7561 aatttcagtg cccacaatac ggcaacaatc cataccatag gcggaacgtc tttggtgcgg
     7621 cggcataaaa gtttaaccac ggcatagctg atgaagccga aggcgatgcc gtctgcaatc
     7681 gaataggtaa acggcatgaa gacaatggtc aggaatgcgg gtgcggcttc cgtcatatcg
     7741 tcccaatcaa tatccctcgc actgcggagc atctgcgtgc cgacataaag cagggcgggc
     7801 gcggtggcaa aagcgggaac acttttcgcc aaaggtgaaa acatcaggca ggcgagcatc
     7861 aatacgccga cggtaaccgc cgtcaggccg gtccgtccgc ctgccgatac gcccgccgcg
     7921 ctttccacat aaggcgtggt ggaagaagta cccaaagccg cacctgccac aatggcggta
     7981 gagtctgcaa gcagtgcgcg tttcaggcgg ggcagcttac cgtccaccag cagcccggca
     8041 cggtgggata tgccgaccag cgttccggta ctgtcaaata gatcgaccaa gaagaagacg
     8101 aaaatcacac tgaccatgct gacggtaaac aggccttcaa aatccatctg cataaaagtc
     8161 ggcgcaatgc tcggtacttc gccgatgatg ccgtgaaatt cattcaaacc catcaggctg
     8221 gcaatgacgg taatggtcaa gatggtgatg atgattgcgc cttgaacgcg gaaatgtccc
     8281 aatacgacca ccatagcaaa accgaacaat gccaacaacg cggacggctg atgaatatcg
     8341 cccaaaccga ccaaggttgc cggattggca acgataatgc ctgcgccttt cagggaaatc
     8401 agtgccaaaa acaaaccgat accggcagca atcgacattt tcaaacccat aggcagtgcg
     8461 ttgaccagca tttccctgac tttaaaaaag ctgaacagga taaaaatcag accggagatg
     8521 aacaccgcac ccaacgcaac ctgccaaggc acgcccatac ccttaacgac ggcaaaggtg
     8581 aaataggcat tcagccccat ccccggtgcg agtgcaatcg gatagttgcc gacaaaaccc
     8641 ataacaaaac agccgatggc agacgcgata caggtagcga cgaataccgc ccccatatcc
     8701 atgccggtct cgcccaaaat cagagggttg acgataacga tgtagcacat cgtcaaaaaa
     8761 gttgtcaaac ccgccatcaa ctcggtacgc accgtcgtac cgtttgcctt cagcttaaaa
     8821 atcccgtcca acagtgtttg ttttgaagtg tccatatctg aaagtctgta tcaagtggaa
     8881 aaatctgaat ccgccgaccg caaaccgtac gaaattgcaa catcttgaaa aacatacctc
     8941 ccaaaccgga caaaccgatt cgggaggcag caggtttacg ggcaaacagc acattatttg
     9001 tctgaattgt gttgacgacg caaaatcgca gggatttcaa agtcgtcaag tacggactga
     9061 ttgtcgaaat ccgcagcggt aaggttcatc gtgcggatac cgcgattggt gcggatcata
     9121 ccttcgacat tgtggctttg ctcctgtttg gacggagcaa ccgcttctac ctcccttgcc
     9181 ggaacaaaat cgaccgcgcc tttttctttc agaccggtag cgataatggt aatccggatg
     9241 gcatcttcgc tcatggtctc gtcttcagcc gcaccgaatt tgcattccaa atcgggatgc
     9301 gcgctttggt tgacgatttt catgacttcg gacaactcgg acattttcaa gcaacccgga
     9361 gcagtcgtaa tattgaccag cacaccgcgc gctccgtcca aggttacatc gtccagcagc
     9421 ggactggaaa tggcctggtc ggtcgccata cgcgcacggt cgataccttg ggcataaccc
     9481 gaacccatca tagcgatacc gcggttgctc atcacggttt tcacgtcggc aaagtcgagg
     9541 ttgatgattt cgctcgggca agttaccact tcggaaatgc ctgcgaccgc atcgcgcaat
     9601 acattgtcgg cggcacggaa ggcttcgcgc atcgttacgt cttcacccaa tgcagtcatc
     9661 agtttgtcgt tcgggatgat gatcagcgaa tcgacgtgtt ctttcaactg ttccaaccct
     9721 gcctgtgcga catggacgcg cttaccttca tatgcgaacg gtcgggtaac cacggcaacg
     9781 gtcagaatgc ccaaagactt ggcaatctca gcaacaaccg gcgcggaacc ggtaccggta
     9841 ccgccgccca taccggtcgt gataaacagc atattcgcac cgcgaatggc ttcttcaatg
     9901 gcttcccggt cttcctgggc tgccgcacgg ccgatatcgg gattcgcgcc cgcgcccaaa
     9961 ccgcgtgtca gattcgtacc caactggatt ctcttcgccg catggttttt tgccagagac
    10021 tgcgcatccg tattggcact gataaactcc acaccgcgca cattgttggc aaccatgtta
    10081 ttgattgcat tgcaaccgcc gccgcccaag ccgattactt taatcaccgc agggctgact
    10141 gccgattctg ccacgtcgta aacaaattcc attcaaaaac tcctgctcgc cccattcaga
    10201 ggacggttta aataaattat tattcattat ataagaagta tcttgctgct ggcaaaatac
    10261 ttctcacctg tcaaacggca atccacctgt tcagaagctg ttttcaatcc accgtttcaa
    10321 tcttgccaac aaaccgccgc ccccttccct ctcttgcact gcaccgtttt ccggctgcgg
    10381 caagtttcct tccagcttgc atgctgcatg aagcagcccg atagcggtag aaaagcgcgg
    10441 tgtgcggacg cggtcggaca aaccgcccat ttcttggggt gcaccggtgc gtacaggcaa
    10501 atcgaagatt ttttcggcaa attccacaat cccggtcatc atggacacac cgccggtcag
    10561 aacaataccc gcattcagca cttctttggg gaaacccgat ttttgcagct cgcccagcac
    10621 tacgccaaaa atctcctgaa tacgtgcact gatgattgct gccaaaacct tactggaaac
    10681 ctgacgcgat gtccggtcac ccacgcccgg aacttcaatc atctcaccca agccttccgt
    10741 atcgcatgat gtcacgccat aatggatttt aatgtactcg gcggcatcga gaggtgttct
    10801 caacgatttg gacaaatctt tggtaatcag attaccaccg gccggaatga cggacgtatg
    10861 gcggatggcg ccgttcatat aaacggcaat atcggtcgtt ccgccaccaa tgtcgatgac
    10921 gcatacgccg aggtcttttt catcttcagt cagcaccgcc tgcccgcttg ccaacggctg
    10981 aagcatgatc tgatcgcttt tcaagccgca ccgctcgata catttttgga cattctgcac
    11041 tgccgtactt gcaccggtaa tgatgtgcac ccgcgtatcc aaacgcacac cgctcatacc
    11101 gataggctcc ctcacgccaa gttgggtgtc gataatgtag tcttgaacca cagcatcgag
    11161 aattttttga tcgggcggga tattgattgc ctttgccgtt tcaatggcgc ggtcgatgtc
    11221 tgcctgcgtg acttccccgt ctttaatttt aaccacacct tgcgaattga gactgcggat
    11281 gtggttgcct gcgatacctg tggtaacgtg ggtaattttg gtatccgcca tcagctcggc
    11341 atcattgacc gcctgcctga tggcttggac ggtggcatcg atattggtta ccatgcccgc
    11401 gcgcaagccc cgtgaaggag cctgccccaa accgacgatg ttgattttgt cgtcatcttg
    11461 aacttccccg atcagtgcga ggactttaga cgtaccgata tccagtacgc tgatgtatct
    11521 ttgctgctgt tccattgttc gtctgctctt aaaactgatt gaaatttgcg tcgcaccgtt
    11581 tcagacggca cggccgtaat ctgtccgata cctgttccca ctattcttcg gattcttttt
    11641 cgggtaaacc gtcgtaagca tagcggactg aaaatccgtc cttatacctc atatccacat
    11701 aggataaccg atttttattt ttacgcaaca gatgctgcca cgcttcggta aaaagccgga
    11761 ggcgtttcat ctcgttttcc cgtccgagcc tgacggtgat gccgttgtcc aaaacgacaa
    11821 tccacgccga acgtgccgta taggtcatct ctttgatgcc caaaccctgt tttgccaaaa
    11881 cagtcgaaaa ttcgtcataa cggcggagca tttcggcaga cgttccttcc gcgcctctga
    11941 ataccggcat tccgggtctg tccaagcggg cttcaaaaac attgccttcg ccgtccacca
    12001 aggcatggtc gccccaacgc gcgaccggct tgcgctcggt caggacgacc tcaaccgtgt
    12061 cgggaaaacg gcggcgaacc atgaccgacg caatccacgg ataccggcgg taggcctcct
    12121 gtgcgccatt gatgtccgtc ctcaaaatat tcccatggat gtattctttc gccaaactgc
    12181 ccaatgcttt cttatcggaa taaaccaggt tgcccttcag cgacacctgc ttgacgggca
    12241 gatgattcga attgtaaaac caaaccagcc cggacgcagc aagcagcatc gccatcatga
    12301 caagcagcca gcgcgtcagc cgttccatcg cttcggcatt atcccacatg tgcggtcttc
    12361 aaaatttcaa tacataaatc ggcaaaaccc acgcccgtaa cggcagcgga tttcggtact
    12421 aaactatggc cggtcatacc gggcagggtg ttgatttcca acagatagag tttgccgtcg
    12481 gtatctttga ggaaatcgac gcgcacgcag ccttccgcac cgattgcctg cgcgccgcga
    12541 accgccagtt cgcgcatcag gctttcttcg gcttcggtca gatcttccga aggacattga
    12601 taaatggtgt cgttgcggtt gtacttggct tcgtagtcgt aaaactcggt cgcggggatg
    12661 atgtgtatgc cgggcaggcc tttgccgttc aacacagggc aggaatattc gccgccgccg
    12721 ataaaccgtt cggcaatgat ttcgccctga aggtgtttca attcttcgta aacgcttttc
    12781 agacggcctt ttcctttgac ttttaccacg cctacgctgc tgccttcggc cgccggtttc
    12841 acaaacatcg gcaggcccaa tttttcttcg acggcatcga aatcagtgtc gtcgtgcagg
    12901 acggcgaact cgggaacggg cagtcccaat gcctgccaaa tcagtttgca gcggtatttg
    12961 tccatgccga tggcggatgc ggcgacaccg ctgccggtat agggaatgcc caacagttcc
    13021 aatgcaccct gaaccgcccc gtcttcgccg taagtaccgt gaaggatgtt gaatgccgtc
    13081 tgaaaacctt gtgccttcaa ttcagacaat ggggtttctt taggatcgaa ggcatatgcg
    13141 tctatgcctt tgctttttaa agcattcaaa atggcggtgc cgctgtccag cgagatttct
    13201 cgttcgctgg aaaaaccgcc catcaatacg gccactttgc caaaattctg cattgttttt
    13261 gttctttcct gattgcttta tgcttgttgc cagaggtcgt ctgaaacctg atttgcggtt
    13321 tcagacgacc tttatatgat gttccgtctg tcaggcgggt gtgcctcaaa tctgtttcga
    13381 caattccagc agcgcggcgg ggacgcggtt gatgcttccc gcacccatat tcaacacgat
    13441 gtcgccgtcc tgcaaaacgt tcaacagcat ttcgggcaga tcggcaacgt tttcgcagta
    13501 aatcggctcg agtttgccca acacgcggat ggcgcgggca agagcgcggg aatcggcggc
    13561 ggcaatcggc tcttcaccgg cggcataaac ttcggtcagc accagcgcgt caacggtatt
    13621 gaggactttg gtaaagtctt caaacaaatc gcgcgtgcgg gtatagcggt gcggctggaa
    13681 ggcgagtacc aaacgttttt ccggatacgc gccgcgtgcg gcggcaaggg tcgccgccat
    13741 ttcgacgggg tggtgtccgt agtcgtccac caagagcgcg gtcccgccgt ttggcaactt
    13801 gatgtcgccg tatttttgga agcggcggcc gacaccttca aagccgagca agcctttttg
    13861 gatcgcttca accgatgcgc cgacttccag cgccacgccg atggctgcca atgcgttcag
    13921 cacgttgtgt ctgccgggca tattcagcac gacttcaaac gacccctgct catgtccttt
    13981 catttgaaca tggacggtga atttcatttg cgcgccgacg ttttcgatgt cggtggcgta
    14041 gatgtcggcg gtatcgtcca aaccgtaagt agcataaggt ttgctcactt tgggcaaaat
    14101 cgcgcggacg tgttcgctgt caatacacaa aaaggctttg ccgtagaagg gcatacggtg
    14161 gatgaaatcg ataaacgcct gatgcagttt ttcgacgctg tgcccgtagg tatccatatg
    14221 gtcttcgtcg atattggtaa cgacggacat aatcggtgtc aggtgcagaa aggatgcatc
    14281 cgactcgtcg gcttcggcaa cgatgtattc gcctttgccc aagcgggcgt tggtgcctgc
    14341 ggcgttgagt ttgccgccga taacgaaagt cgggtcaagt cctgccgcgc cgaggatgga
    14401 ggcggtcaga ctggtggtcg tggttttgcc gtgcgtgccg gcaatggcga tgccgtcacg
    14461 gaagcgcatc aactccgcca acatcagggc gcgcggaata acgggaattt gctgctccaa
    14521 cgcagcgaca acttcgggat tttctttttt gacggcggta gaggtaacga cgacattcgc
    14581 accgttaacg tgttctgcgg tatggccggg ataaacttga atgcccaggc tgcccaaatg
    14641 ctcggtagcg gcatttcgcg cctgatccga accggaaact ttaaaaccca aattgtgcaa
    14701 gacttcggcg atgccgctca tgccgacgcc gccgataccg acaaaatgga tgttggtcac
    14761 tcgatttttc atcataatgt tgcgttccgg tggatttcga tgcgtaaagg cgttatttta
    14821 aagggctgac cgtttgcgcg ccatagtttt ctgacaaata tatagcggat tgaaataaaa
    14881 aacatccatg ccgtctgaac ggcttttcag acggcatggt tcggcagttt acgccgcaca
    14941 cgcaatcgcg gcttcggcaa cgtcgtccgc gctgtgcggc aatgccaaag tacgggcgtt
    15001 ttctgcccat ttgagacatt tttcacggtt caggctgccg aggatttcgg cgagtttttc
    15061 cgccgtcaac tgggtttgcg gcaacagcaa tcccgcctcc gcctgcacca taaaacgcgc
    15121 gttggcggtt tgatggtcat caacggcgtg aggatacggc actaacaacg cacccaatcc
    15181 cgccgccgtc aactcggcaa tcgtcagcgc gccggcacgg caaatcacca aatcggcatc
    15241 gcggtaggcg gacaccatat cggtaataaa ttccacgcat tcggctttca cgcccagcgc
    15301 gtcgtaatcc gcctgcaagc tgcccagctt gccccgtccc gattggtggt acatctgcgg
    15361 acgcgcattg tcgggcagca aagccaatgc ctgcggtacg gttttgttca aaacgtccgc
    15421 gcccaaactg ccgccgacca ccaaaatttt cagacggcct tcacgccctt ggaagcgttc
    15481 ggcaggcacg ggcaggttgc taatatcggc gcggacgggg ttgccgacca agccgccttc
    15541 gtggctgaac gctttcggaa aagcgtacaa cacccgcttc gcccagcgcg acaggtggcg
    15601 gttggacaaa cctgccacgg cgttttgctc gtgaatcaca atcggcacgc ctaatagctt
    15661 cgccgccaaa ccgccgggga aggtaacgaa gccgccgaag ccgatgacgc actcgacacg
    15721 gtgtttgcgg ataatccgct gcgcttcgcg gacggtttga tacaaagtaa acggcagcat
    15781 cagcttgcgt ttgatgccgt tgccgcgcac gcctttaatc gccagcgttt ccaagcgtat
    15841 gccgtattgc ggcacgatac gctcttccat cgaatccttg ctgcccagcc aaatcacatg
    15901 atggccgcgc gcgcgcaacg aatccgccac cgccagcgcg gggaaaatat gtccgcccgt
    15961 tccgcccgcc atcagcataa aggttttacc gcccatgatt tactccaccc ggtaaccgcg
    16021 cattttccgg cggttttcat aatctatacg caacagcagc atcatgctga tcagcatgaa
    16081 aaagactgac gaaccgccat aggacatcaa cggcagcgtc agacctttgg tcggcaaagc
    16141 accgatgttc acaccgatat tgaagaaact ttggataccg atccaaatgc cgatacccga
    16201 agcgatatag gcgttgaaag tcaaacccaa atcgcgcgac tgcttaccga tggaaaacgc
    16261 ccgcaccacc agccagccgt aacagaatat cagcacgcac atcccgaaga agccgaattc
    16321 ttcggcgatg atggcaaaaa taaaatcggt atgcgcttcc ggcagaaagc cgcgtttgct
    16381 caaactcgca cccaaaccca taccgaacca ctctccgcgc ccgattgcca tcagagagtg
    16441 ggtaagctgg tagccggcac cctgcgggtc tttccacggg tccaaaaatg ccactacccg
    16501 ctgcacacgg tagggagcgg cggtaatcat cagcaccatc ccgcccaaga cgctgcctac
    16561 caggacgaaa aaatatttcc acggcaatcc tgccaaaaac agcattccaa cggcaatgac
    16621 ggtaatgacg acaaacgaac cgaaatccgg ctgtaccatt atcagcacca aaccgaacgc
    16681 caccagcata atcggcagga tgatcgcccg gaaacggccg tacatttcta atgtttcacg
    16741 acgtgcctgc ggattggtgg cggacatgat cagattggcc gtcccccgcc aaatcgactg
    16801 ccaacccaaa ctttccatgc tgcgcaacac ttcttcacgg cgcgtgaaca ggcttgccaa
    16861 ataaaggatg accgccagct tgaacagctc ggtcggctgg aaattcaacg gacccaaagg
    16921 tatccaacgg gtcgcgccat tgatttcgcg cccggcaatc aatacgacta ccagcaacag
    16981 gccggatagg gcaaaaatcc acggcacaag ccgccgccat gtcctcatcc tgcaaagaaa
    17041 ccataaaaaa ccgctcgcta tcaagccggc aacgacgaac cccgcctgtc tggtcaaata
    17101 gaaaaactga tcgccgcctt ccttcgatgc caaatacaca gaagccgaat aaatcatcag
    17161 caggctgaac gccgtcatca gcaccaccat ccacaaaagc ggcgcgtcga atttcctgcc
    17221 gtcgcgcaca atcggtctgt cgagcagcag agtgtggaca ccgtcgccca cttttaccaa
    17281 tacttccgaa atcttcaaaa aaaccacctg ccagtctgtt tgcacctgcc gcaaagggca
    17341 aaaatttcag acggcagaca atgccgtccg aacatacgat acatcccaaa tcggtattct
    17401 aaatctttac ttgccgccca acaatgacgg cgtttgcatt tcagacggca tcacaaagcc
    17461 ttaaacgctt cgataaacac ttccgaacgg tgcgcgtagc ctttaaacat atcaaaactc
    17521 gcacaagccg ggctgagcag cacgatatcg cacgcttcgg cttgggcata tgccgtctga
    17581 acggcttctt ccaaagtggc gcagtcggtc atattcagac cgcagccgtc caaatcgcgg
    17641 cggatttgcg gcgcatcaac gccgatcagg aacacgcctt ttgccttgcc ggcaagcgcg
    17701 tcgcgcagag gcgtgaagtc ctgccctttg cccatgccgc ctaaaatcac gaagagcgga
    17761 ttttgcaaac cggcaatcgc ggcggcggtc gcgccgacat tcgtgccttt gctgtcatca
    17821 atgaatacca cgccgttttt cttgccgatt ttttccacgc ggtgcggcag gccttggaag
    17881 gttttgacgt gttcaagcaa tgcttcgcgc ggcaaaccga cggcttcgca caaagccacg
    17941 gcagccatga cgttggtggc gttgtgcaag ccttgcaacg gaatgtcttt cgtggcaatc
    18001 aaatcttcat tgccttgttt caggcggcct gtctcacgtt ccaaccaaaa atcggcttcg
    18061 tgttccaacg aaaaccattt tacctcgcgc ccggcacgtt tcatggcacg gcagaacgca
    18121 tcgtccgcat tcaaaacctg cacaccgtcg ccacggaaaa tcttggcttt ggtatgcgcg
    18181 tagtcgagca agtcgtcgta gcggtcgaga tggtcttcgg aaatattcag taccgtcgcc
    18241 gccgtcgggc gcaggctttc ggtgttttcc agttggaagc tggaaagctc caacacccac
    18301 acgtccgcct ttttgccttc gcgctgccat tccgcctcca aaaccggcgt gccgatattg
    18361 cccgcgataa cggtatccag cccgcacttg atacagagat agccgaccag gctcgttacc
    18421 gtggttttgc cgttgctgcc ggtaatcgca attaccttgt cgccccggcg gttcacaatg
    18481 tccgccagca attcgatgtc gcccaacacg cgtccgccgt tttgcttgaa cgcctcaata
    18541 tccggctgac gctcgctgat gccggggctg agtgccaaaa tatcgaaacc gttgtccagc
    18601 gcatctttca gacggcctgt gtaaaacacc agcccgtcaa acatcttacc gatttgcgac
    18661 acgcgctcgg gcttcaactc cgcatcataa gcggccacct ccgcgccgtt tttgcgcaga
    18721 taggcaatca tggaaatacc cgtaccgccg agtccggcga cgaggatttt tttgttttca
    18781 agcgtcattt tggttttgtc ctaaaacaaa tcatattggg caggtggggg gatgtccgcc
    18841 cctgcccaag ccgctttcag acggcatcgc gggctgttca ataacctgcc ttcaggcgtt
    18901 ggtaaatgtc gcagccgtct tggtctccgt tttgacaagc cttaccaaac cattcttgag
    18961 cgagcacaag gtcttggcgc acgccgcgtc ctttgtaata cattgcgccc aaattgtatt
    19021 gggctgctgc atttccctgt gctgccgcct gcaagttttc ccgaaaatcc gatacgtcat
    19081 ccgcccacac cgcttggttc aagcccaagg caatcagggc ggcggcaagc catttgactg
    19141 tctgtttcat ggttttactt ctgttttagt ataagccgcc gttaacgata gggctgggcg
    19201 gattgtcgcc gcaggtttat tgcgcgttca aatgccgtct gaaaggtgtt cagacggcat
    19261 aggttcagcg gattttgagg gtactcaaac cgatcaacac caagacgatg gtaataatcc
    19321 aaaagcggac gacgacttgg gtttctttcc agcctttttg ttcgtagtgg tgatggatgg
    19381 gcgccatcag gaagatgcgt tttttggttt tcttatacca gccaacctga agcataacgg
    19441 atacggcttc tacgacaaat aatccgccca taatgacgag gacaaactct tggcggacga
    19501 tgacggcgac ggtaccgagc gcggcaccca atgccaatgc accgacatcg cccataaaga
    19561 cttgcgcggg ataggcgtta aaccacaaga aaccgaggca cgcgccgcac atggcggtac
    19621 agaaaatcac cacttcgttt gcgccggcaa cgtaaggtaa ttgcaggtat tgggcaaatt
    19681 gtgagtggcc gctggcatag gcgaagatgg cgaggccggc ggcaacgagg acgacgggga
    19741 aggtcgcaag gccgtccaag ccgtcggtga ggttgacggc attggatgta ccgacgatgg
    19801 tcaggtaaga caacaccaaa aagccgacca cgcccagcgg cagggcgatt tgtttgaaga
    19861 acgggacaat caaaatattg ttggcggaat tggcggcaag gtaaaacaat gccaaactgg
    19921 cgataatggc aacgcttgac tgccacacca ttttgaattt ggcggacacg ccgttggggt
    19981 ctttatagac gactttgcgc cagtcgtcgt aaaaaccgag tgcgcccgtg gcgagcaata
    20041 cgcccaagag aatccagata tacgggtttg cccagttgcc ccacaacagg gtggacacgg
    20101 taatggcggt cagaatcagc gaaccgccca tcgtcggcgt gccgtttttg acgaggtggg
    20161 tttgcggacc gtcggtacgc actgcctgcc cgcatttgag cgcggtcagc ctgcgtatcg
    20221 tccacgggcc gaacatcagg gaaaacgcta aggcggtcaa cgccgccatg acggcgcgga
    20281 atgtggtgta ttgaaaaata ttcagaccgg ttaaccagtt gctgaaatgt gcgagccata
    20341 aaaacatggg gcttcctttt tttgttttgt
//
LOCUS       DAWEYF010000022        19797 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.022, whole genome shotgun sequence.
ACCESSION   DAWEYF010000022 DAWEYF010000000
VERSION     DAWEYF010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19797
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.022"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(209..284)
                     /locus_tag="WGN93_000547"
     tRNA            complement(209..284)
                     /locus_tag="WGN93_000547"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(249..251),aa:Asn,seq:gtt)
     gene            complement(377..736)
                     /locus_tag="WGN93_000548"
     CDS             complement(377..736)
                     /locus_tag="WGN93_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ0226486.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(759..1403)
                     /locus_tag="WGN93_000549"
     CDS             complement(759..1403)
                     /locus_tag="WGN93_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ0226487.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1405..1941)
                     /locus_tag="WGN93_000550"
     CDS             complement(1405..1941)
                     /locus_tag="WGN93_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ0226488.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1953..3050)
                     /locus_tag="WGN93_000551"
     CDS             complement(1953..3050)
                     /locus_tag="WGN93_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ0226489.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3053..4489)
                     /locus_tag="WGN93_000552"
     CDS             complement(3053..4489)
                     /locus_tag="WGN93_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ0226490.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WGN93_000553"
     CDS             complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WGN93_000553"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ0226491.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVHLTYHPLFFIARYSAAGRQ"
     gene            complement(5479..6126)
                     /locus_tag="WGN93_000554"
     CDS             complement(5479..6126)
                     /locus_tag="WGN93_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ0226492.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WGN93_000555"
     CDS             complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WGN93_000555"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ0226493.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKGTSRIRLSLTADMTMDEVRQFAACL"
     gene            complement(7300..7437)
                     /locus_tag="WGN93_000556"
     CDS             complement(7300..7437)
                     /locus_tag="WGN93_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HEZ0226494.1"
                     /translation="MATETNVAEISALDYEGRGVAKVGGKTVFIKRALLDCLMLGWFR
                     L"
     gene            7501..8577
                     /locus_tag="WGN93_000557"
     CDS             7501..8577
                     /locus_tag="WGN93_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ0226495.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWIAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8784..10250)
                     /locus_tag="WGN93_000558"
     CDS             complement(8784..10250)
                     /locus_tag="WGN93_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ0226496.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WGN93_000559"
     CDS             complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WGN93_000559"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ0226497.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WGN93_000560"
     CDS             complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WGN93_000560"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ0226498.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVCPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13529..13813)
                     /locus_tag="WGN93_000561"
     CDS             complement(13529..13813)
                     /locus_tag="WGN93_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ0226499.1"
                     /translation="MKKLLLAAVVSLSAATAFADDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WGN93_000562"
     CDS             complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WGN93_000562"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ0226500.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGGFPRMPYAEA
                     MFYYGSDKPDMRIGLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15830..16531)
                     /locus_tag="WGN93_000563"
     CDS             complement(15830..16531)
                     /locus_tag="WGN93_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ0226501.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPQ
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16674..17822)
                     /locus_tag="WGN93_000564"
     CDS             complement(16674..17822)
                     /locus_tag="WGN93_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ0226502.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17982..18245)
                     /gene="rpsT"
                     /locus_tag="WGN93_000565"
     CDS             complement(17982..18245)
                     /gene="rpsT"
                     /locus_tag="WGN93_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ0226503.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18548..19690
                     /locus_tag="WGN93_000566"
     CDS             18548..19690
                     /locus_tag="WGN93_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0226504.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5097 a         5111 c         4603 g         4986 t
ORIGIN      
        1 gcgagccaat gccgtactgg tttttgttaa tccactataa aatcgagttt atcctagttg
       61 tccaggacag cccctatttt ttcataacca tcacgaaagg aattttgcaa agattttatt
      121 ccatctcaaa acaatcatct caaaaatgcg tttctgaccg ccggtaaaac aaaaccctct
      181 aagaaaatac ttagagggtt ttgaaatttg gctccccgac ctgggctcga accagggacc
      241 tgcggattaa cagtccgtcg ctctaccgac tgagctatcg gggaataagc gcgaataata
      301 aaacagaaat accgaacgtg tcaatataaa ttgacaatcg attgcacttt atctgcaagc
      361 ccgcaatctt tatatgttat atggcttccg caatatgcct tgccgcacgt ttggcatcca
      421 ataggattaa accaagtctg ccggtttctt ttgccaccag caccaacacg gcatctttac
      481 ccgcctgact taaaaggata tagcctgatt ttcctttaat catcacttgt tccaattccc
      541 cgcaggcgag ttcctgcacc gagcgactcc ccaaagcaag caaagtggca gaaatcgccc
      601 ctaccctgtc cgaattcaaa tgtgaaggaa gcattgtcgc catcggcaat ccgtcggttg
      661 agataacggc agacgcgata atatccgtag atgtattgtt taaatcttca aggattgaaa
      721 tcaataattg ctgcataacc cctcctctct cccaagtttt acacgcggtt gctgtaacgg
      781 cggtataaaa tccttaccaa agtaacaaat gcctctttgc ccaaatcggg aatgccgccg
      841 ataaccaaaa taaatttggt tgaaccgata tacaatggga aaaatgtcaa ttcgctctga
      901 ccggaaggat cgcaaacgcc ccaagcgtta ttgttgatat acaggttgtt cttaatcagc
      961 agccggtatt tcttttccat ctgtgcgact tctgccgcca acaaccccaa ctcttccgcc
     1021 gcctcatgat ggaaattggc gttggcaaga tacagaccgt tccgatcgac caataacgcc
     1081 ttaccgctgc cggacaattg ttccatcagc aacggcaatt gctcgtccga caaattgatg
     1141 ccgtctgaat gaccgttttc atcgccatag aggaattcga gtttttgcaa acggtacaac
     1201 aggttcaaag cggtatcgat gtcggcggtg tccgcccaag taagcagctt ctcactgctg
     1261 accatttcgt ccgcatccgc tttcaacagg ctgtgcaaca aagttttacc ggcactgggg
     1321 gcatcgctgg atacggcata aaatgcaccg gcaggagtca ggcggggata taaatttgct
     1381 tgtagtgaaa gtgttgattc catattaaac ctccagtccc ggatcaatag aaaataacat
     1441 tgcgctaacc aattgtttta cgtcatcttc cttacgggca tcaatttcaa aaaccggaac
     1501 attaagatta tgttttgcaa gatatttgtg atacacgtcg ataccgggct gagagcgtat
     1561 atccatcttg gtaataccga caacgacggg tgccttctcc agcagccctc gaaacgaatg
     1621 taaaaagaat tccaaatctt tcaacggatt ggttcgggca ttatctaaaa gcaagaccaa
     1681 acccatactg ccttggctta agatttccca cataaagttg aaccgttcct gaccgggcgt
     1741 accatataaa tggactttgg tatcctcatc caagctgatg gccccgtagt ccatcgccac
     1801 tgtcgtattc cttttcctat ccaaagtcat atcggatgcg gaagcatcgg tctgaacgag
     1861 tgcttcgtcc gaaatagccg caatggcagt ggttttccct acgccgacag gtcctgtgaa
     1921 aataatttta ttttctctca tctctccgcc tcttagctgc ccaacagttt tttcatcagc
     1981 ctttgcagaa ggccgcgcga ctgggattgg gatggtgttg tgattttttc cgcttttttc
     2041 atcatttcac tatcagaggc agaatcggct ccgatattta ttttatccgc catatcggag
     2101 tatgcctgtt gtgaaaccgt ttttaaatct accgacaaaa acccggttgt ataggttgcc
     2161 gcaagataat tcagaatatc attgaggttt aaaggcatca ctttatacaa cacgttaagg
     2221 ttgacggatg ccttggtcag aaatgccgac aagcgtatcg accctggcac atttgccaac
     2281 cgggtcaggt ttggccaaga tttcaacgta aacggagtat cgggagaaat cggataaatc
     2341 aacctgccct gcgccgtcca aatggaaaac tgccacatac aggacataat gcctacttta
     2401 gccttttcgc gccattgcgg gttatcggga acagtcttgc agctgacctg caaattttcg
     2461 tctttgcaca attcttcgag tttttgcaca ctttctgtca gcaaaacccg ttgtatcgag
     2521 gggaaaacaa taaggaccgg cttatttcca tgcaagatag cgatgtcctg cctgttcttt
     2581 tccgcaaacc gcaacgcccc caataatcct ttattcgggt taaactggcg tatcgtaacc
     2641 gtacgctgca cattcccgtt atttttcgcc gaccggtctg cgggtgcaat aaacgatttc
     2701 ccataaacat tctcgccctg caacaatttg cggagcatag gaaacaatgt ttcaaaccga
     2761 atcggtttgg gcaggtaggg aacttcagaa tcgggaactt tctccgaaca gacggcgacg
     2821 ggtatatcct tataacgctc ggcaagctct ttccaaagtt caaaaccgcc ctcggcatcg
     2881 gtatccgcca aaaccaaatc gggcacggca ctgccgtctg aaggggatac tgtttcataa
     2941 cgggtggtat tgtgcatttt gaatgccatt ttgaaaacgg attcctgctg cgccgtcatc
     3001 cccgccaaca ttacgcgtac tgttttaatt ttcggcagtt gaacttccat ttttattttc
     3061 cgtaccgttt tattttttta atattttgat tcatacgctg cagcagccgg ctcatcagca
     3121 taacgacctc ttcaggaagc ctgtccgcac gttccctcaa tacccttaaa aactgcccca
     3181 acctatccca atcttcagta cgttcataaa tatcgatcaa cgtaatataa agctgggact
     3241 cgtcgggata tttcaatacc gcctgctcca acacatccat tgccgcttca atctgaccat
     3301 acatcagcaa cgactctact tccttaaccg catcgtctgc cggagacgaa ccggtgttga
     3361 tcaacgaaga atcttgaagc accaaatccc gatgttgcga tttgaatttc tgtatatttt
     3421 tcggcagata cccgtgcccc ataccgatgt ctttgatttg ccggtcgttc ggcccttttt
     3481 ccaaatcatc gaaaacttca tggtaaccca agctgtaccc ccaccccagc atccgctctt
     3541 taacctgcct gccgtagttg cccaacgttt ggtaaagttt ccacaaatgt ccggcaaaac
     3601 ggtctatgtc cgcgtgttgg taatcgagtt tcaacgcatc gataatcagg tttgcaggtt
     3661 tttcggaagt ttggatggca cggtcgtatt gtttcgatgc cgtttcatag ctgactttgt
     3721 ctttaaggat tttcgcacct tgatcggcac ggaccaaacc ggcaatcgca ccgatttcct
     3781 cttgactgat tccggacacg tcttttttgc cccgcacaat cgggatgcgc ttgatttctt
     3841 cggcttcata agccttaccg ccggcatccg gtgggggcga tgcggaagct gccgtcgcag
     3901 aaccgccttc cgcacgtttt tcaatctcct gagtacccca tcccaaaccc tcttctgcca
     3961 agacgcggat acgcaaatgg tttgaatcgc gctgtaatgc ctgttcgata tattttgcca
     4021 aaagttcgga aggaatcagt ttgccgtatt tttgcagatt gtctgccaaa acatcgacat
     4081 cccccacttc gagattgata tcgagcagct cgcggataag gttttcaggt ttcgcttcac
     4141 catccggaat gccgtccaga taggcagcca aagattcggc agccttgccc tgataaccga
     4201 attgcttata aacctgatac tccgtaagcg gatcgacttc ttgcgcggat acggcggcgg
     4261 atgcggtctc ggcactttcg ttccaagacc agtcgggttg cgtgccgtct gaaaccgatt
     4321 gtccaatctg atcgacccag tccgaatcat tgcttccggg tgtctgcccc tgcgtattgc
     4381 cgacaccttg ggatttgcgc ttcggtgttt tcttaccctg cttcgcacgc ataaccaaaa
     4441 gcatcagcaa taccgccagt gccaaaccga taattaatga gttttccaaa ggatactccc
     4501 gataccgtaa cgagcggata gctgaccgcc tgcaacggcc attgtccgct tttattatta
     4561 acgatttact gaaatagact tgtaagtttt aaatcatacc ataatttaac gtttaacaat
     4621 atgccttctg cacaagcctc gccatattac cttttaccca catcagtatc aatacccgat
     4681 ataaaaataa ctttgcccat aagctgcctt attgcctgcc cgccgcagag tagcgcgcga
     4741 taaaaaataa cggatgataa gtcaggtgca ctttgcccga cggcatactg aacgccgaca
     4801 agtaatcgcc aataaatcca ttgagatttt ttcttgtcca atttttttgg ttcgtggctg
     4861 ttacgcctgt atatttaagg tgtttgagta catctaacgg cgtatcaaag tctagtatta
     4921 ccttaaaatc ctcacaccat aaaagctcaa aatctttggc taaccaagtc tgccattggg
     4981 ataaagtcgg gtaatttaag cctatatttg taatttggcg gacttctttt aaattgtctt
     5041 tgccaaaggt tgcaaccgcc aataatccgt ttgctttcaa gcctgttttg caatgggcga
     5101 taaaagcgtc gggttgatga aaccattgca cggcagatgc gcttgcgatt aagtcaaatt
     5161 gtcgttgaaa aggaaagttt tccgcatcgc cgcaataaaa atcaaaggat tgcggcagtt
     5221 tttcagccag ttggggctgc acatcgcaca aatcattaaa taaccaataa ttcgctgaaa
     5281 tctgtttttg cagcaaggca ctcaacattc ctgagccgca acccaattcc aacacgtttt
     5341 ccaatggcat atccggcaaa taatcttgca aatgcgccat tagattaatc gtcatttttt
     5401 gttggattaa ggcgtgccgg tcataatcgt ttaatgcttt ttggaaagcc tgccgaatgc
     5461 gcgatttatt tatggcagtc agtgattcca tagtgccgac caatgggtga atcttgaaaa
     5521 caggtaatgt ccgccgtcaa tttcccgaac ggtgcaacgc ggtgtccaat atcggtgctg
     5581 attggcaggc ataaaaattt tatcgcccga tccgaccaag gcatttgtcc agcgaatcaa
     5641 atctgcgcgc ctatcttgcc cgatcatcgc aaaaagtgcg ataagttctt gatgaatttc
     5701 gtcaaacgga cgggcgggaa attgttggta atcttcaaaa gatgctttat cgccacacat
     5761 tctgcgttca aattttaaac gggtgttttc cgtgaggttc tccaatgtgc ctttaaaaac
     5821 ggcgcaaggg ataccgaaat tatcatcgca aggcaaacct gtgccattca ctgccgttgc
     5881 ggattttaat cttattcctt gcaatgccct ctctgccgcc caaacgccca ttgaccacgc
     5941 caccaaacgg atgtgccgat aggcggaaaa atcaaaatcc aaatttaaat cttgataatc
     6001 atagcaaatc aataaatcgt gattttccgg caaaatcaaa tgatttacag catcgggcgg
     6061 cgttccccaa cctgcaaaat acaggattaa atgttcgcct tgatgattgt aaaattttgt
     6121 tttcatatca tatccttaca ggcacgccgc aaactgccgc acttcatcca ttgtcatatc
     6181 tgccgtcaaa gacaatcgta ttctggatgt accttttggt actgtcggtg gtctgatggg
     6241 caggcaataa taaccctgcc tttgcaggta ttcagctttg gcaagggtgg cttcattccc
     6301 gcctaaaata taggggacga tacaggtttg gctcggcatt atttgcgtcc gatgcgccac
     6361 ttcccgccgt aaaaatgcgc ttaactgctc aagatggctt ctttcttttg agaattgcgg
     6421 caatcgttca aaaataaaat aagtccaagc cacattaaac ggcggcaatg cggttgaaaa
     6481 aatcaatggg cgcatttgat taatcaaaca ttctttcaat acttggttgc agacggcata
     6541 cgcccccacc gaggctaagg ctttaccgaa agtgccgacc aataaatcaa tctcggcaat
     6601 caaattatcc cgttcggcaa tccccaatcc gttttgccca taaacaccga ttgcgtgggc
     6661 ttcatccaca taaagataag tattgggaaa ctgttttttt aattggacaa gctgtttcaa
     6721 atccgccaca tcgccgtcca tactgaaaac agattcggta acgataaaag tgcggtcaaa
     6781 ttttccgacg tttttttcaa gcagattttt caaatgttca taatcattat gacgataacg
     6841 gaaaaacgca caccggctca aacggatgcc gtcaatcata ctggcgtgaa caaatttatc
     6901 tgccaaaatc aaacttttcg tcgtcgtcaa agcaggcaaa ataccgagat tggcgtgata
     6961 gccgctgttg aacaataacg cgctttcccg ttggaaacgt tgtgcgacaa gctcttccaa
     7021 atcggtataa ataggaaagt tgcccgttaa taaacgcgat gaagaactgg taaaagaggg
     7081 aaaattaccg ccgtattgct gcaaaaaaga ccggcgcaag ttttcatctg atgccaaacc
     7141 caaataatca ttagacgaca tattcagcat tttgcagttt tcccgcgtaa tataccgccc
     7201 ttgatgaatc aaatccggaa tcgaacgata ttggttttgc gcgccgagtt gttcaagctg
     7261 ttgtttaaaa accttcatta tgatgtaaat attcctgagt taaagcctga accaacccag
     7321 catcaaacaa tcaagtaatg cccttttaat aaaaaccgtt ttgccgccga cctttgccac
     7381 acccctgcct tcataatcca aggcggaaat ttccgcgaca tttgtttccg ttgccattac
     7441 ccaatccgtc cgcactgtac cgaagcgcat attttcgcac aaattggtac ggtttcaggt
     7501 atgatttgcc gaaaacctat cggacacaca ccatattttg atatgaataa aacaatctgc
     7561 cgcactgctg cactattgat aagcggtttt tcatacgcaa acaccgtcat tcccgatgtc
     7621 tcccccgtcg cacaaggtca acatgtcttc attaacatcc ctcagcaacg cctgttcctc
     7681 tacaccgacg gcaaactgac caaggtttat cccgttgcag taggtcgggc gatgacgcaa
     7741 accaatctag gcgaacataa aatcggtgcg aaagcctata accctgtttg gtacatcccc
     7801 aaatccatac agaaagaacg cggcgacggc gtaaaaacca tagccgccgg cccggacaac
     7861 cctttggggc cggtttttgt ccgcttaggc gaccccaaac tcggtttggg tatacacggg
     7921 accaatgcgc cggccagcgt ccccggggtt cggagtcacg gctgcgtccg catgaaatcg
     7981 cccgacgcgc tcgagtttgc caaaaccatc gccagcggct cgcccgcctc cgtcatctat
     8041 caaatggcgg gtctcaatga agatgcggat cgcaacctgt ggattgccgc cttccgcgac
     8101 ccttacggta agaacaacct tgacatcgcc tctctgaaaa aaagtattgc gcaatgggca
     8161 aaaacacagg gtaaaaccat cgcgcccgag aaagtcgatg ctgtactcaa agaccgcacc
     8221 ggatcggccg tctgcctgac ctgcggcaaa aacggcaaga tgaagatgcc gctcaaatcg
     8281 ctggcgtgga tacagggttc ttcctcatac agccaagctg aagtcattga acaaactgag
     8341 gaaaccaact ctgccgaaat atccgagaca cgcacgcccg aagtgcctga tgtacacacg
     8401 cccgaggcac aaccgcattt aaatacccaa tccgacggca cgccgactgc ctataccgaa
     8461 ccggctgccg attcatcgcc gcaagtagaa acacctgatc aggcagcttc cgagccggtt
     8521 gatgtattat tttcaataga tgtgatacgg cagggaaatt tgcgtttagg taattgaata
     8581 accttctgat tatttaatgc ttatgtttat cagaagttga taggcggttt ggtttttgtt
     8641 tggcttttcc tacaccgccg cctgccgctt tctgcaacat tcaagcgcac aaatatgcca
     8701 tctgaaggct ttagacggca tatttcacga taatagtcgc ccaatcaaat aaacacagat
     8761 tggaaattta ttttattttt cccttaccaa taccccagaa ctttccacca aatgctgccg
     8821 ataacgaaaa aaatcagaaa attgactacg ctcatgataa aacccgcctt ccaccattct
     8881 cccattgtgg tgtagcccga accgaaaatc acaggcgaag taccggtcgc ataatgagtg
     8941 agggtcatca taatgttgga tgcggccgcc atcatcagcg cggtcggcat cgccggggca
     9001 ttcagtgaaa cggcagcagc gaaaaatgcg ccgaacatag cggtaatatg tgcagtagta
     9061 ctggcaaaca tataatgcgc atacatataa gcaagcacga ggattacgcc cgcagccgtg
     9121 ccgctaacgc ccaaaccgcc gacactttcc gccaacactc cggagaacca tttaatcagt
     9181 ccgagtttat ttaaaaatgc ggccatcata atcaatgcgc caaaccaaat aatcgtatcc
     9241 cacgcgcttt tttctttcaa aacatcgtcc caagtcaata caccggaaag caaaagcagg
     9301 cttaatccga taaatgcggt ggcggtggcg ttgatactaa aagcgtgatt gccggtaata
     9361 agggcgggaa catctgccca caacagcaac aagataccga aaatgaccgc cataatgatt
     9421 tcgtctgccg acattttacc catctccctc agacggtctt tggcaaattg aacggcattg
     9481 ggcgtttctt taatttcagg cggatacaaa aaatataaaa tcaaaggcat aacgaaaaag
     9541 gcgataacgc cgggaacagc cattgcccac gcccacgccc cccaagaaag acggaaacta
     9601 ctgcctaaat tttcggcaat caagttgacg attaaagggt tgggggcagt tgcagtaata
     9661 aacatagccg acgaaatggg attggaatga tagttgacca aagccaaata tttacccatc
     9721 ttgccttctg tgccttttgc gggattggag ccgtaactgc cggcaatcga ctgcataatc
     9781 ggatgtataa tgccgccgcc gcgcgcggta ttggaagggg taacgggagc cagcagcagt
     9841 tcggaaagag cgagactgta accgatgccc agcgtttttc ttccaaaaac ggcgataaac
     9901 aaatatccga tacgcatccc cagccctgtt ttgagcaaac cgcgcgaaat cataactgcg
     9961 atggcaatca gccaaatcaa cggattggcg aacgcactca acgcatcgct catcgccgcg
    10021 cccggtttgt cggcggttac gccggttact gcgaccaacc cgacggcaat aatcgacagc
    10081 gcgcccaacg gcatggcctt gccgataatg gcggcaatca caccgacaaa catggccagc
    10141 agcgtccaag cctgaggctt gaccccgtcg ggtacgggca gtgccaaaac cagggcgcac
    10201 aatactgcgg caatggcgag gggtatcggt ttgaaaccca atttcatcat attgacctcc
    10261 gtaaaaaaga ccgtcccgaa aaatcggaaa aataatattt aactaattgt tttataagat
    10321 atattccgat atttcaccgt ctttccgata tgcggctccg ggcaactttt gtttcagtat
    10381 ttgaattttc attagactga atacgccgtt tgaacggcac ggcgaaaacc cgggggatgc
    10441 cggacgttca gtcctttttc gcaccttgaa ggtaaagcat ttccaaggca attgtggcac
    10501 cggccaaagc ggtaatgtcg gattggtcgt aagagggggc aacttctaca acatccatac
    10561 cgacgatgtc gagatccgtc agcccacgta ggatttttaa tgccctgtcg ctgctcaagc
    10621 cgccgcatac gggcgtaccg gtcccggggg cgaacgacgg gtcgaggcag tctatgtcga
    10681 aagtcaggta aacgggcata ttgccgacgg tttctttgat tttacggacg gtctcttcaa
    10741 cactgtcttc attgactttg ggggcggaca acacagtaaa aggcaatttt ttactgtgtt
    10801 cggtgcgtat gccgatttgt acggaacggg acgggtcgat gaggccttcc ttgggggcgg
    10861 tatagaacat cgtaccgtgg tcgtattcgc tgccgttgtc gtaggtgtcg gtgtgcgcgt
    10921 caaaatgaat cagtgcgagt ttgccgaaat agcgggcgtg ggcgcgcaac aacgggaggg
    10981 taatgaaatg gtcgccgccc aaactcaaac agcgtttgcc ggaagaaagt aatttgccgg
    11041 cgtgcgcttc cattttttcg acaaaatccc tgctgtcgcc aaaagaaaaa accaagtcgc
    11101 cgcaatcaat aatgttcagg cgttcgcgca catcaaatgt ccatggaaac ctgcggtgct
    11161 cccaagcgag gttgacggag gcgcgccgga tggcttcagg accgaaacgc gcgccggaac
    11221 gccctgaaac cgccatatca taaggcacac cggtaataac ccaatcggca tgactttcat
    11281 acggcataaa attaagcggc aggcgcaaaa acccgaaatt attggaaacg agggagttgt
    11341 cggtttgtcc tgccagtgtg ctgtattgca tcgtaatgat tccttgtaat tggtttcaat
    11401 cggtcgtgat gattggtgtt tgagtaagaa aatcgggctt cagacgacat atccgatgcc
    11461 ttgatgcgtc tattcgtctt ccaaataggt ataaccatta agccccgctt cgagttcttt
    11521 taagaaagac atagcctgcg aggcaggaag gtctgaatgt tcgatttgtt cgcgatagcg
    11581 tttcatcagc tctttcggat cttgataaac gtattcgagc atatcggcaa cggtgtttcc
    11641 ttcatcgtaa tcgatgacgg taaattgtcc gtcttcccct acaacaacat cggcagtggc
    11701 agtgtcgccg aaaagattgt gcatattgcc gagtatttcc tgatatgctc ccaccataaa
    11761 aaagcctaaa agcggcggct cttcttcggg ataatcaggc ataggcatcg taccggcgat
    11821 gccgtcgccg tcgatgtagt ggtcaatcgt accgtctgaa tcgcaggtaa tgtccaacaa
    11881 cacggcgcgg cgcgcaatcg gttcattcaa accggtaatg ggacaaacag ggaaaagttg
    11941 atctatgccc caagcatcgg gcaaagattg gaagagtgag aaattgacat acagcttatc
    12001 ggcaaaacgt tcttgcaatt cgtcaataat ggttcggtga gaccggtgtt tttcattaaa
    12061 caattcgccg acttcatgac agatatttaa atacagttgc tccgcccacg cacgttgcgc
    12121 caaactcaac agcccgacat tatactgatt atgcacatcg gcaagatcaa actgcccttc
    12181 gtgtatccag ctgcgtaagg aacgtttttc ccgcgaggcg gaaatatccg tccaagtttc
    12241 ccacatactg tgcaacacac gcggcgcttc gggcgatggc gcatccagcc ggcgcggttt
    12301 gtaacgctca acgcctataa cattagcaac caaaacggcg tgatgtgcgg taatgccgcg
    12361 cccgctctcg gtgatgattg tcggatgcgg cagcccgtgt tcgagacaag cctgactgat
    12421 gccccatacg actgtggcgg catattcgtt gaggctgtaa ttaacggaac aatccgattg
    12481 tgtgcggttt ccttcgtaat ccacgccaag cccgccgcct acatcaaaac agcggatatt
    12541 tacccccagt ttgtgcaact caacataaaa ccgagccgat tcgtgtacac ctgtggcaac
    12601 atcacggatg ttcccaagct gcgagcccaa atggaaatgc aaaagctgca ggcaatccag
    12661 cctgtttttt tgtttcaaaa tatcgaccag ttgcaaaact tgggaagccg acaagccgaa
    12721 ttttgatttt tccccacccg aagactgcca ttttcccgaa ccttgggaag ccagtctggc
    12781 gcgcacaccc aaacggggct tgatgccgag tttttccgcc tcttccaata ccatttgtat
    12841 ttcggacagc ttctcaatca ccaaataaac ctgatgcccc agtttttcgc ccatcaaggc
    12901 gaaacggata tattcacggt ctttatagcc gttgcagacg attaatgttt gccgggtgcc
    12961 ggcgtgtgcc aaaaccgcca tcagttcggc tttagaacca gcttccaaac catgcggttg
    13021 tccgcttgac ataagcgatt cgatgacgcg gcggtgttgg ttgaccttga tagggtaaac
    13081 caaacaataa ccgcccttat agccgcactc ttcccgtgcc gtctgaaagg cgcggttaat
    13141 gtcgcggagg cggtgttcga ggatttgcgg aaaacaaaac aaaacaggca ggcgcgcctg
    13201 atgtttttgt tgcacggctt cagtcagttt ttgcagtgaa acagtttgat tgtgttgcga
    13261 gggattgggg cagacgatga tttcgccgga atcgtcaaca tcataataac ctatgcccca
    13321 atgattaatg ttgcacactt cacggatggt aaggataggc ataataaacc tgctccgtct
    13381 gtcgtgttga aaaggaatga ttataacaaa tcagcgtgaa atgtcatttt tttaataaga
    13441 aaagcctgcc tcatacctga tgaggaacag gcaaaatgtc gtctgaacgc ttcagacggc
    13501 attttggttc atctttccat caaaggagtc agcgatcgag ctgctctttg atgattttca
    13561 ggtcggggta agacaacacg atgtcgtatt cgcggccgtc tttataggct tccacttcca
    13621 aaacaggttt gccccaatgg tcgtcggcat cgacatcgtg aacctgataa ccgcgctgtt
    13681 ccaacatttt tacggctttt gtgcggtttt gttcaaaatg gggatcaccg taaatctgac
    13741 gctcggcaga atcgtcggca aatgcggttg cggcactcag ggaaacaacg gcagccaata
    13801 acagtttttt cattttcagt cctttcttaa tcggttgatt gaataagatg tgtttttcaa
    13861 tgctgccatt aaaacacagc aaaattaggt ttgaattagc aggaagttaa gaagcgtaaa
    13921 tgccgtctga aaaaaacaga gccgtcaaac ggctccgttt tccttatgct tctttggttt
    13981 cagccgcctt ttgacgcagg cgcaagctca attcgcgcaa ctgcttgtcg tccacgctgt
    14041 tgggcgcgtt ggtcagcagg cattgggcac gttgtgtttt cgggaaggca atcacgtcgc
    14101 ggatagattc ggcgccggtc atcagggtaa ccaaacggtc gaggccgaat gcaaggccgc
    14161 cgtgaggagg cgcaccgaat ttcaggttgt ccaagaggaa gccgaatttc tcttgttgct
    14221 cttcagggct gattttcagc gcggcaaaca ctttctcttg tacgtctgca cggtggatac
    14281 ggatagagcc gccgccgatt tcccagccgt tcaataccat gtcgtaggca cgggccaggc
    14341 agtttgcagg gtcggaaacc atcaggtctt catgaccttc tttaggcgcg gtaaacggat
    14401 ggtgtacggc aacgtagcgg tcggcttctt cgtcgtattc gaacattggg aaatcgacaa
    14461 cccacaaagg tttccattcg tctgtgaagt agccgttgtc tttgccgtgt tccaagccga
    14521 ctttgatacg caatgcgccg atggcttcgt tcacaacttt ggttttgtcc gcaccgaaga
    14581 agataatatc gccgttttgt gcgccggtac gctcgatgat ttctttcagg gcattctcag
    14641 acaggaattt tacgattgga gattgcaggc cgctgtcttc gccgtttgag aggttgccca
    14701 catcgtttac tttgatgtat gccagacctt tcgcaccgta gatgccgaca aatttagtgt
    14761 attcgtcgat ttctttgcgg ctgaatttcg caccgttcgg cacgcgcagg gcaaccacgc
    14821 ggccgccttt catatcggct gcgccacgga agactttaaa ctcttccgtc ttcatcaggt
    14881 cggtcaactc ggtaaatttc aagccgatac gcatatccgg tttgtcagaa ccgtaataga
    14941 acatcgcttc ggcgtaaggc atacgcggaa aaccgcccaa gtccacgccc agcgcgtctt
    15001 tgaagacttg tttcgccata ccttcggtga tgtccatgat ttcatcctcg tttaagaacg
    15061 aggtttccaa gtcgatttgg gtaaattcgg gctggcggtc ggcacgcagg tcttcgtcgc
    15121 ggaagcactt ggtgatttgg tagtaacggt cgaaacccgc caccatcaac agttgtttga
    15181 ataattgcgg cgattgcggt agcgcgaaaa actcgcccgg atgaacgcgg ctcggcacga
    15241 ggtagtcgcg cgcgccttca ggcgtggagc gggtcagcat cggggtttca atgtcgatga
    15301 aaccttgcgc gtccaagtag cggcgaacgc ccatagcaac ttggtaacgc aggcgcaggt
    15361 tgcgctgcat caccggacgg cgcaggtcga taacgcggtt ggtcaggcga acgttttcgc
    15421 tgatgttttc gtcgtcgatt tggaacggag gcgtagcggc agcgttcaac acttcgattt
    15481 ctttggcaag gatttcgatt ttgccggaaa tcattttgtc gttggtcgtg ccttcgggac
    15541 ggttgcgtac gcggccggta atgctcaaaa cgtattcgtt gcgggcggag tcggcagcgg
    15601 caaatgcttc gggcgtgtca gggtcgataa cgacttgaac gatgccttcg cggtcacgca
    15661 ggtcgataaa aatcacaccg ccgtggtcac gtcggcggtg tacccagcct ttgacggtaa
    15721 cggtttggtc taagtattgc tcgctgatca ggccgcagta gttggtacgc ataaaatcac
    15781 cttttattga tttaaactga aaacagaaaa tgccgtctga acggcggctt tattgttgtt
    15841 cgggcaaatc cgccttttca gacggcatag gtcctgccaa tgttttgacg ggcaggtcgt
    15901 cagggatgac catacccagc gaaatcacat atttcaacgc ttcgtccacg ctcatatcga
    15961 gttcgcgcac atcgcttttc tttaccataa tatagtaacc gccggtcggg ttgggcgtgg
    16021 tcgggacata cacggaaaga taatcgccat cctgcggcaa tgcggcctta accgcattcg
    16081 acacctgccc tgacacgaaa gcaatcgtcc aaatacccga ttggggaaac ggcacgagta
    16141 ccggcgtttt aaacgagcgg ctgctgtcgg acagcagcga ttcggatact tttttcacac
    16201 tcgagtagat ggatttgaca accggaatcc gccccaacag gctgtcccac gcggcaagaa
    16261 tctgccggcc caatacgttg gcggcaaata atccggttac aaacaatacg gcaatggcaa
    16321 caataacgcc cagccccggg atattgaagc ccaaaacata ttgcggccgc cattgcttcg
    16381 gcagcaggtt gacgagctga tcggacgcgg aaacgatata ggaaaccacc caaaccgtta
    16441 ccgcaatcgg cagccagacc aaaatgcccg taatcagata tttttttaac gccttggcag
    16501 ctttgccgcc ttcggccgca ggttccgtca tcttgcttga ttccgacaaa gtccgtacaa
    16561 accgcacatt atacgcgttt gcccggattc aaacgaaatt tttatcccgc cccgccaaac
    16621 cgccggcggc ttcagacggc acggcaactt gatatatcgt ctgaacacgc ggttcagatg
    16681 ccgtccaagt cgttgaacat caacccgata ccgataccgt tctgcttgtg gttgtagtcg
    16741 atcaggctct cgccgtaacc gtggaatccg cgtaccacgc ctttgagttt gcccttaatc
    16801 ggaaacgtgt aggcggcttc aatcgcgccg tagcccgttt tggggttgta gcgcaatacg
    16861 gaatacacat tctgcctgtc gttcaggcgg tactgcagct tcacgtcgcc ataccccata
    16921 tagtcggcaa tatcgggatt gtcgttttta tcgccgctct gatcgaacgc acgcacccac
    16981 acgcgcggaa tcaccgtcaa tttgccccat tccatgcctg ccatggcata aatcctgttc
    17041 cacgaacgcg attcgggacg gctctgtccg ttggactggt ggacaaaacc cgcaccgagc
    17101 atacgcagcc tgccgccgaa cggcaaatct gccttcacag gctgggtcag gaaaatttca
    17161 ggtttgtaat ccgtattgcg gaacggcgcg gatttcctgc cttggttgta aatctgccaa
    17221 tcggatcttt gggtgtagcc gaaccacaga tccgcgcggg ttttaaacaa atcttcggca
    17281 attttgcttt tgaacgaaac ctgcaatttg gtttccgcac gtttctgctg tccgaatttt
    17341 tcctgtacag tcgtaccgcg cgtcggcgaa cccggggcat agttgggcga attgttgtac
    17401 cagagcggca taaggtacat cggattgtgt tcgcgtacgc ccaacagccc gcgcaaatcg
    17461 tttttgtcca agtcgtacat caggctcaaa ggcgtataga tgtcggcggt ttcgcccgca
    17521 ctgtcggcag gaagcgcatc cccgcctttt tcaacaacaa tgaccgcctc gcccttatcc
    17581 aggctgctgc ggacggtttc cgtcagattg agtacggctt tcgactcctg cccttcctgc
    17641 cctgccgaag acggaagctg tgccgcaaaa atcctgtcgt aacacgccaa acgcgtaaca
    17701 ttgtccgtca aagcggcgca ttgcagcgcg gtctctccaa aagcggatgc catcggcaac
    17761 agtcctgtca aaagaatata gcgcatattc cgtgtattca tctccgcccc cattgtcggc
    17821 atattggttt tcaaacggca ttttatagcg gattcggata aaaaccgcac cctttccgcc
    17881 atttcgggat tttgcccccg caatacagaa aaccccgaaa ccgtcgggct tcagggtttt
    17941 ccgcttatcg cgtatcaacc gccttggcgg ttttgcaaaa atcaagccag tgcttttact
    18001 tttgcagaca gacggctttt gtggcgtgcc gctttgtttt tgtggaacac gcccttgtcg
    18061 gcgatgcggt cgatgacttt gacagactct tggtaaaccg cttgtgcggc agctttatcg
    18121 cctgcttcga ctgctttcaa tacttttttc actgcagtgc ggaatgcggt acgcaggcta
    18181 gcgttgtggg cgcgttgttt gacggactgg cgggcacgtt tgcgtgcttg tgcgctgttt
    18241 gccatattgg aatctcctga aagaaaaata aattctgtaa acgcgcaatt ttaaaggggg
    18301 tttacattat atgcaagcct tttctctcta tccgcccgtc ggacaccctg acagcgcaaa
    18361 aaaacggcaa aatcgtgcgg acgttttctc cctcttttga aaacaaggta attttttagg
    18421 aaaatcaggt caatatcgct ttgagtttgc acaaatttac tttacaatgc ccaaaccttg
    18481 cgccggggtg tttatggggc gcggggtttt ctttttttcc aacctctttc atcaggaatc
    18541 tgcccgtatg aaaaaatccg tattagccgt tttggccgcg ctgtctctgg cagcctgcgg
    18601 cggcagcgaa aaaaacgccg tgcaacctca agcagacgct gcgtctgctg ccaatgccga
    18661 agccgctgcc accgatactc tgaacatcta caactggtcg aactatgttg acgagagtac
    18721 ggtcgaagac tttaaaaaag ccaacaatct gaagctgact tacgacttgt acgaaaacaa
    18781 tgaaacgctg gaagccaaaa tgctgaccgg caaatccggt tacgatttgg ttgtgccggg
    18841 catcgccttc ctgccgcgcc aaatcgaggc gggcgcgtat caaaaagtca acaaagacct
    18901 gattcccaac tataaaaaca tcgatcccga actcttgaaa atgctggaaa ccgccgaccc
    18961 gggcaaccag tatgccgtcc cctatttctc cggcgtgaac acgattgcga ttacggcgaa
    19021 aggcaaagag cttttaggcg gcaagctgcc cgaaaacggc tgggatttgc tgttcaaacc
    19081 tgaatacacc cacaaactga aatcctgcgg catcgccctg tgggacaccc cgagcgaaat
    19141 gttcccgatt ttgctgaact acttgggcaa agaccccaaa ggctcgaatc ctgaagattt
    19201 gaaggcggcg gcggaagtgt tgaagtctat ccgtcctgat gtcaaacgtt tcagcccgtc
    19261 catcatcgac gagctggcgc gcggcgacat ctgcctggcg gcaggcaacg gcggcgattt
    19321 gaacttggcg aaagcacgtt ccgaagaagt gaaaaacaac gtcggcatcg aagtgctgaa
    19381 tccgaaaggc atgggcttct ggattgagtc ttggctgatt cccgccgatg cgaaaaacgt
    19441 cgccaatgcc cacaaataca tcaactacac gctcgacccc gaaatcgcgg cgaaaaacgg
    19501 catcgccgta accttcgccc ccgccagcaa accggcgcgc gaaaaaatgc ctgccgaact
    19561 ggtgaacacc cgttccatct tcccgaacga gcaggatatg aaagacggtt tcgtgatgcc
    19621 gcaaatgagt acggatgcga aaaaactgtc tgtcagcctg tggcagaaaa tcaaagtcgg
    19681 caccaactga tttgaagcat taaaaatgcc gtccgaacat cgttcggacg gcattttata
    19741 ttggattgaa atagaaatat ttatatagtg gattaacaaa aatcaggaca aggcgac
//
LOCUS       DAWEYF010000023        19544 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.023, whole genome shotgun sequence.
ACCESSION   DAWEYF010000023 DAWEYF010000000
VERSION     DAWEYF010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19544
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.023"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(242..844)
                     /locus_tag="WGN93_000567"
     CDS             complement(242..844)
                     /locus_tag="WGN93_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ0226505.1"
                     /translation="MTNVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQAMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(878..2149)
                     /gene="purD"
                     /locus_tag="WGN93_000568"
     CDS             complement(878..2149)
                     /gene="purD"
                     /locus_tag="WGN93_000568"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ0226506.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSATAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            2307..2624
                     /locus_tag="WGN93_000569"
     CDS             2307..2624
                     /locus_tag="WGN93_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ0226507.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKYVVTLIRDMDNFYT
                     HEYQACHQAIEDGVELDLSTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            complement(2676..3287)
                     /locus_tag="WGN93_000570"
     CDS             complement(2676..3287)
                     /locus_tag="WGN93_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ0226508.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILERDLQLDCRLTVSLSLVNYEACVAAWKNTRQIEVNTEKPFE"
     gene            complement(3350..4285)
                     /locus_tag="WGN93_000571"
     CDS             complement(3350..4285)
                     /locus_tag="WGN93_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ0226509.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            complement(4296..5045)
                     /locus_tag="WGN93_000572"
     CDS             complement(4296..5045)
                     /locus_tag="WGN93_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ0226510.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIEGGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            complement(5272..6240)
                     /gene="waaC"
                     /locus_tag="WGN93_000573"
     CDS             complement(5272..6240)
                     /gene="waaC"
                     /locus_tag="WGN93_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ0226511.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEVGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFQAETWREMGHLKQTLRQEAFNFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGLAALAYAKTYAVPKGKNAVWRNRELFAQVFGYAMPETQV
                     FGLTVPEVGRLKNLAQPYYAALHATSRDSKLWPMENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            complement(6278..6913)
                     /locus_tag="WGN93_000574"
     CDS             complement(6278..6913)
                     /locus_tag="WGN93_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ0226512.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMSSAGAVILKNAEEIKKYINNQ"
     gene            7027..7707
                     /gene="tsaA"
                     /locus_tag="WGN93_000575"
     CDS             7027..7707
                     /gene="tsaA"
                     /locus_tag="WGN93_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ0226513.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLASAAEVCIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIIDIKPYIPFVESKPDASSGFVSGKPEELEVV
                     WLENIGAENLSESTQNLISQSIAQDPRPAYQDIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            7776..7895
                     /locus_tag="WGN93_000576"
                     /pseudo
     CDS             7776..7895
                     /locus_tag="WGN93_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7965..8969)
                     /gene="gap"
                     /locus_tag="WGN93_000577"
     CDS             complement(7965..8969)
                     /gene="gap"
                     /locus_tag="WGN93_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ0226514.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQNILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            9411..12005
                     /gene="mutS"
                     /locus_tag="WGN93_000578"
     CDS             9411..12005
                     /gene="mutS"
                     /locus_tag="WGN93_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ0226515.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRHIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TTQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            complement(12128..12619)
                     /locus_tag="WGN93_000579"
     CDS             complement(12128..12619)
                     /locus_tag="WGN93_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ0226516.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(12623..13018)
                     /locus_tag="WGN93_000580"
     CDS             complement(12623..13018)
                     /locus_tag="WGN93_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226517.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNTVYGAGGTKASGN"
     gene            complement(13039..14433)
                     /locus_tag="WGN93_000581"
     CDS             complement(13039..14433)
                     /locus_tag="WGN93_000581"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ0226518.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNAGNVVYQTRRFDRYKEVIAELLEKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWADL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNTLADECLYFYVKQTPTEADVQKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            complement(14549..15205)
                     /locus_tag="WGN93_000582"
     CDS             complement(14549..15205)
                     /locus_tag="WGN93_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ0226519.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            complement(15202..15555)
                     /gene="arsC"
                     /locus_tag="WGN93_000583"
     CDS             complement(15202..15555)
                     /gene="arsC"
                     /locus_tag="WGN93_000583"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ0226520.1"
                     /translation="MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIAEHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            15679..16161
                     /locus_tag="WGN93_000584"
     CDS             15679..16161
                     /locus_tag="WGN93_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ0226521.1"
                     /translation="MKYLNLAAIALAATFAAHTASADELAGWKDGTAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            16355..17005
                     /gene="ftsE"
                     /locus_tag="WGN93_000585"
     CDS             16355..17005
                     /gene="ftsE"
                     /locus_tag="WGN93_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ0226522.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            17002..17919
                     /gene="ftsX"
                     /locus_tag="WGN93_000586"
     CDS             17002..17919
                     /gene="ftsX"
                     /locus_tag="WGN93_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ0226523.1"
                     /translation="MSIIHYASLHIESARTALKELLRQPFGTLLTLLMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRIANVRFIGKEDG
                     LAELQSNLDQNLVSMLDGNPLPDAFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSTVRPLVDAIFKPYGLNIGWRFFYPEEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            18010..18258
                     /locus_tag="WGN93_000587"
     CDS             18010..18258
                     /locus_tag="WGN93_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ0226524.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(18325..19503)
                     /locus_tag="WGN93_000588"
     CDS             complement(18325..19503)
                     /locus_tag="WGN93_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ0226525.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASIASV
                     KYCVDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAADTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
BASE COUNT         4919 a         5475 c         4415 g         4735 t
ORIGIN      
        1 aatcatcttc ggcgttttca tttttatgga ttaaaacaac acgggaaaaa tctgttttca
       61 gatgattgcc cgcttgattg ttcggattat tgtccggaac gacaaaaccg tcctcaaaat
      121 taaagcagac gttgcgtcct tctaccttta tctctgtgca ataacaatca tgtagagaaa
      181 tgctatccga aaaatttttt ctttgtgtat gcaaaaaaag ttttcattca agtacccata
      241 tctaacgcaa acgtttacct gtttccccgt caataatctg actcggcgat ttctgcctgc
      301 cgattcgccc accaacaatc cacacatcgc gtccgaattg ccttctgact tccctctccg
      361 tccgacacgc gcgtttgcct gcgcggttgc acgaagtcga gaccaaaggc gtttgcaaag
      421 cctgacacaa gcggcgcgca cctacatggg cgggaaccct gaccgccaac ttgctgcgct
      481 gtttcccgcg taactcaggt aagacacagg atttggcaga taataggaac gttttagggg
      541 cgggccattc ttttctaagc atagcctgca gattttcaga cggcatttga agtaaaggct
      601 gcaattgctc aaattgattc ccgatgacaa tcataccctt gtgttgcggt ctttttttca
      661 aatgcgccaa cttaccgagt gctttggcta atgtcggaag acaccccaag ccataacaag
      721 attcggtcgg ataagcgacc aaaccacctt ttttcaaata aacgcttaac ttacgttgcg
      781 ctgatgctgc gataattctc ggaaataaca taatataaaa taccgtctga agcacattag
      841 tcatacttgg cttcagacgg catcatcctc tttctaatta acggttaatc gctttatcgg
      901 caatgtcttt acggtattgc atcccgtcga aactgatttt ttccaacgcg ccatatgcct
      961 ttgctttcgc ttgcgccaca ttgtcgccca atcccacaac acacaatacg cgtccgccgt
     1021 tggtcaatac gtcacctttc tcgtttgccg ttgtacctgc atggaaaact ttgcctactt
     1081 ggttggcagc atccagaccg gaaataacat cgcctttttt gggcgtttcg gggtaatttt
     1141 gcgctgccag taccacgccc acggcagttt gcgggctcca ttccgcggtt gcgctatcga
     1201 gtttgccgtc tattgccgct tcaaccaaat ccgataagtc gctgttcagt cggctcataa
     1261 tcggctgggt ttcaggatcg ccgaaacggc agttaaactc aatcgtatag ggtgcaccgc
     1321 tttgatcaat catcaaacct gcgtacagga aaccggtgaa ctcatgcccc tccgctttca
     1381 tccctgctac ggtcggcaaa ataatttcat tcatcgcgcg ttcgtacaca acaggcgtta
     1441 ccacaggcgc agggctgtac gcacccatac cgcccgtatt cagacctttg tcgccgtcta
     1501 aaagacgctt gtggtcttgg ctagttgcca taggcagtac attattgcca tcaaccatga
     1561 cgataaaact cgcttcttcg ccttgcagga aatcttcaat cacaacacgc gcgccggcat
     1621 tgcccatttt gttgtccagc agcatatcat caatcgcagc atgcgcttca tccaaagtca
     1681 tcgccacaat cacgccttta cctgccgcca aaccatcggc tttgataacg ataggcgcac
     1741 ctttctgatt gacgtaatca tgtgcggcat cggcgttttc aaaggtttga tattgcgcgg
     1801 tcggaatgtt gtatttcgcc ataaatgctt tggcgaaatc tttggaactt tccaactgcg
     1861 ccgcatattg tgtcggaccg aatattttta gtcctgcggc acggaaatca tccacaacac
     1921 ctgccgccaa aggcgcttca gggccgacga cggtaaaaac aatattttct ttacgacaga
     1981 attcaatcaa atcctgatgc gcagtcaagt cgatgttttg caacttgggt tcaatcgctg
     2041 taccggcatt accaggcgca acaaatactg tttccacttt aggcgactgc gccaatttcc
     2101 aagccagcgc gtgttcgcga ccgccattac cgataaccag cagtttcatg ccatctcctt
     2161 gacaaatatg tacttttaac gaaaactcga tacaaaggga cttttatccc atctgaagaa
     2221 attttagtag aatcaaacaa aagaccgctt cattccactc tgcaacctat tcaacttatc
     2281 cataaattaa aaaaggacaa gcaaccatgc aaaaacgtat tgatgaaatc caaagcaaat
     2341 accgcgaatg gtgtcattta ctaccgcaac tggaagaaga catccgccgt tggaaatatg
     2401 tcgtcacttt aattcgcgac atggacaatt tctataccca cgagtatcag gcgtgtcatc
     2461 aggctattga agacggggta gaactggatt tgagtacgga aggcgaatac agcattatga
     2521 gtgaagatgc actatggaac gcgctgggcg aattccatca attggcttgg ttatatttgc
     2581 gctccagcgt cgatgcctta gacaaatata cacaagaaga ttagtcagcg aagaggtcgt
     2641 ctgaaatacc atcacaaagc atttcagacg acctttcatt caaaaggctt ttccgtattt
     2701 acttcaatct gccgagtatt cttccaagcc gcaacacagg cctcataatt taccaacgac
     2761 aaactgaccg tcaatcggca atccaactgc aaatcccgct ccaatatatc cgcctgatat
     2821 tgtttggcaa tgcgtatcgc ttcattcaaa aacggatatt cacatttcag ccaaacagtt
     2881 ttttcaatat tcttttcaac tacttctgca actgccaacg cttgagccgt cgcctctttg
     2941 tacgcatgta tcagacctgg aacacctaac aaagtaccac cgaaatagcg gacgaccaca
     3001 accaaaacgt cggtaatacc caccgaatca atctgtccca aaattggtcg tccagcactt
     3061 cctgatggct ctccatcatc gttggcacga aattgcatgc catccacacc caaacgatag
     3121 gcatagcacc agtgtcgtgc tttatgatgc tcttccttta acggatcgag gtattttttc
     3181 acatcagcca atgtccgaat cggataggca aatgcaataa aacggctgcc tttatcttta
     3241 aactcagcct gcgtcgagga agtaatggtt ttataagtcg taatcatgct gaaatgtttt
     3301 cagacgacct cattaataac aaggtcgtct gaacgtttca cgtgaaacat taatttttca
     3361 atacttctgt taattgtgga acgatttcaa ataaatcgcc aaccaatccg taatcggcta
     3421 cattgaaaat cggcgcatca gcatctttat tgattgcaac aatcacctta ctgtcttgca
     3481 taccggcaac gtgttgaatc gcacctgaaa taccgattgc aaaatagagt tgcggcgcaa
     3541 ctactttacc ggtttgtccg acttgagcat cgtttggcgc atattcggca tcaaccgccg
     3601 cacgggatgc accgattgcc gcacctaaaa catccgccaa cggtgtcagc acttcattga
     3661 atttttccgc actacccaac gcacgaccac cggaaacaat cacttttgcc tgagtcagtt
     3721 caggacgatc ggaatgggaa agctgacggt taacaaaacg actcaggttt tgggcagggg
     3781 ttgcttcaac attaattacc tcagcattac caccttgcgc cgccactgcg tcaaaaaccg
     3841 tcgcacggaa ggtcagcacc aatttttctg aatcagcttg cacggtttca aatgcattac
     3901 ccgcataaat ggggcgcaca aaagtcgtgt tatccacaat ttcggtcaaa tcagaaattt
     3961 gcggtacgtc taataaggct gctacgcgag gcaaaaggtt tttaccgaat gtagttgccg
     4021 ttgctgcaac atagcagtaa tccgctgcca atttaacaac cagcggagcc aactcttcag
     4081 ccaaaccttc ggcataatgg gcagcatctg caaccaaaac tttttccaca cccgccactt
     4141 gttttgcgaa ctctaccaca gcagatgcac cgcttccggc aaccaataaa tcgattttac
     4201 ccagcttagc ggcagcggta acagcatgca aagtggtagg attcaactgt ttgttgtcgt
     4261 gttcgacaat aatcaataca ctcatttcag cctcctcaaa tcactttggc ttcgtttttc
     4321 aatttttcaa ccaattcggc aacgcttgct acttttacgc ctgcctgacg cgccttaggt
     4381 tcggcaaatt tcaccgtttt caaacgaggt gaaatgtcgg caaccaaatc gtcaggagtc
     4441 agtttttcca aaggtttttt ctttgccgcc ataatattgg ggagtttgac aaagcgcggc
     4501 tcgttcaaac gcaaatccgc gctgataaca gcaggcagtt tcaatgcgat ggtttcttcg
     4561 ccgccatcaa tttcgcgcac aatctgtact tcaccacctt caatgtgtac ttttgaagca
     4621 aacgtacctt gcgccgcatt cagcaaagct gccagcattt gcgccacttg attggcatca
     4681 tcatcaatcg cttgtttgcc caaaaagaaa atttgcggat tttctttgtc cgcaacggct
     4741 ttcagcaact tagcaacggc cagagactcc agtttagtat cggtttcaac atgaatggca
     4801 cggtcggcac ccatcgccaa agctgtacgc aacgtttctt cgcatttctt ttcgcccaaa
     4861 gaaaccgcta cgatctcgct tacttttccg gcttctttca aacggacggc ttcttccaca
     4921 gcgatttcgt caaacggatt catcgacatt ttgacattgc cgatatccac atccgaacca
     4981 tcggctttta cacgaacttt gacgttgtag tccactacgc gctttactgc gaccagtgct
     5041 ttcattgaac cctcctaaaa agaacgctgc tttcaccatc cagcgaaacc aaaccttctt
     5101 ccctataaaa ccaaatccgt tttccttaaa aacgaattca ttcaaaaatc tttcggataa
     5161 tgcttgccga ttataccatt tttaaagcat ttactcagac tagcggatat acattcctgt
     5221 atctaataaa ttggaaaata tcatgccgcc atatcagttt tagacgaccc tttagccttt
     5281 atctgctgca acacaatcca tcagcgcttg ataaaccaaa tctgcggtcg gaatctgccc
     5341 gatattgccc aaattttttg caattggcga aacctgaacg cctgttttaa tcggatcggt
     5401 atcggtataa atgccgacca caggtttttc caaggcattt gccaaatgca gcaaaccggt
     5461 atccacgccg acaattccga ccgcgtattt cagcagatac gctgcctgca ataaatttat
     5521 tttgtcgcac acaatagcaa acggcagtcc gtctgcaatc tgtttggcac gcgttttttc
     5581 atcttcattt ccccaaggca ggtaaatatt gcattgctgt tcttcattca acttttgcag
     5641 caacgaccgc cagttttcca taggccataa cttactgtcc cgactggtcg catgcaaagc
     5701 cgcataatac ggctgcgcta aatttttcag acggcctacc tcaggaacag tcaagccaaa
     5761 tacctgcgtt tcaggcatcg catacccaaa tacttgggcg aacagctcac gattgcgcca
     5821 aacagcattt ttccctttcg gtacagcgta tgttttcgca tacgccagcg cagccagtcc
     5881 ctcgcgcgcg ctatttttat ccaaaccata aataggggat ttcgccattt tagcgaaaca
     5941 cgcgctttta atcagacctt gactgtccaa tacaaaatta aatgcttcct gccgcaaagt
     6001 ctgtttcaga tgacccattt cccgccaagt ttcagcctga aagagatgtt tgcgccattg
     6061 ccgccatttc atcacatgga tttttttcac aaacggatgc aggcgcgcaa tatctgtaaa
     6121 tccaacttca cacaaccaat ggagttctac atcagggcat tgtcgcgcca aatcctcaat
     6181 tgcgggcaaa gtgtgaatta aatcgcccat actagacaaa cggacaagca aaattttcat
     6241 attttaagaa gtatgtttca cgtgaaacaa ttttaactta ttgattatta atatattttt
     6301 taatttcttc agcgtttttt aagatgactg caccggcaga actcatttcc tgccatgccg
     6361 tttcaatggt atccggcgca atgccccgac aagccgcttc attgacgata acctgccaat
     6421 taccaccttt aagtaactgc aaaaccgttg ttttaacaca ataatccgta gctaacccac
     6481 cgataataac cgtatccgta ttttgacaac gcagccattc aatcagccct gtgcttagtt
     6541 tttcctcaat atcgtgaaaa cacgcgccgt aaggatgcaa ttcaggatca acacctttcc
     6601 aaacgcaata atcatattct ttggcagaag gcagtccgtc caataattca tagccgcgcg
     6661 taccgaccat cgcatgagcc acccaagtca aatccgcatc aggcaaacct gtcggcttca
     6721 acatatcaac agggttatcc acaagccatt tcgctaccat atgatgcgca tctttcgtca
     6781 tcacgcgcaa atccgccaaa gcggcttgag cattcaactc ctcgacaatc aaatgcccct
     6841 cgttcacggg cagttcgtca ggacacagtg gcgtaaacgt tttttgtgca tcaacatcaa
     6901 tggaaacaat catctcatta tttcaacgcg attaaaatgc cctgtattat aacaaattac
     6961 tgcccaaaag cggtaaaacc gattgtgata agataaggtt tttccaaaaa acttacccac
     7021 aaccttatga cttataccat tacccccatc ggcaccgccc gatcgcccta caaacagaaa
     7081 ttcggcatcg cccgccagcc cggtttagcc tctgccgcag aagtatgcat cgagctgaat
     7141 cccgaattta ccgcagacag cgtgcgcggg ctggaagatt tcgattatgt gtggataagt
     7201 tttatttttc acggcgtatt ggatgaaggc tgggcgcaaa tggtgcgccc gccacggctc
     7261 ggcggcaaac aaaaaatggg cgtgttcgcc acgcgcagcc cccaccgccc caaccatctc
     7321 ggactctcgc tcctgaaact cgaacgcatc gaaaccggca aacccgtccg cctctattgc
     7381 agcggcgcag acctgttgga cggcacacca attatcgaca taaaacccta catccccttt
     7441 gtcgaatcca aacccgatgc atcatccggc ttcgtcagcg gcaaacccga agagcttgaa
     7501 gttgtatggc tggaaaacat cggcgcggaa aatttatctg aaagcaccca aaacctaatc
     7561 agccaaagca ttgcccaaga cccgcgcccc gcctatcagg atattcccga acggatttat
     7621 gtgatgaata ttgcggatta cgaagttagg tttcaaatcg aagaaaaccg tgcaaccgtt
     7681 attgatcttt ccccaacccc gctttaaatc gggcaaaaat ccggttttgc cgcatagcag
     7741 ttgaacaaac ggctgttgtt tgttcgccat aagccgcaat atcaagttat agcggattaa
     7801 atttaaatca ggacaaggca acgaagccgc agacagtaca aatagtacgg caaggcaagg
     7861 taacgccgta ctggtttaaa tttaatccac tatacagata aacaatgccg tctgaacgca
     7921 atgtgttcag acggcattta cttatccaca ggtttgttca agccttagat tttgcctgca
     7981 aagtattcca aagtgcggac gagttggcag gtataggaca tttcgttgtc gtaccaggca
     8041 acggttttca ccagttgttt gccgcccacg gtcatcacgc gggtttgggt cgcatcgaag
     8101 agcgagccgt attcgatgcc gacaacgtcg gaagaaacga tttgatcttc gttgtagccg
     8161 taagattcgc tggcggctgc tttcatcgcg gcgttgattt cttctttggt tacagggcgt
     8221 tcgaggacgg aaaccaattc ggtcagcgag ccggtggcaa cagggacgcg ttgggcggag
     8281 ccgtcgagtt tgccgttcaa ttcagggata accagaccga tggctttggc ggcaccggtg
     8341 ctgttgggca cgatgttgag cgcggcggcg cgggcgcggc gcaaatcgcc tttgcggtgc
     8401 ggcgcgtcaa gggtgttttg gtcgccggtg taggcgtgga tggtggtcat caggccttcg
     8461 actacgccaa attccttttg caggactgcc gccatcgggg caaggcagtt ggtggtgcag
     8521 gaagcggcgg aaatgacggt ttcgctgccg tccaaaatgt tttggttcac gccatatacg
     8581 acggttttca catcattgcc gccaggtgcg gaaatcacga ctttgcgcgc gccggcacgg
     8641 atgtgggctt cggctttggt tttgttggta aagaagccgg tacattcgag gacgacatcc
     8701 acacccaact cgccccaagg caattcttcg ggattcggat tggcaaaaac tttgatttct
     8761 ttgccgttta ccacgatggc atcgtctttt aattcggcag taccttggaa acggccttgc
     8821 gtgctgtcgt atttgaaaag gtgcagcagc atttcggcag gggtcaggtc gttgacggcg
     8881 acgacttcga tgtcgtgggc tttttcaatt tgacgcaatg cgaggcggcc gatgcggccg
     8941 aaaccgttaa tcgctacttt aatgctcata ttttgtctcc aggttgtgaa ataaagtccg
     9001 atgcctgcat tgtattctga aataaagtta cattccacta ttacatctaa ctacttgacg
     9061 cttatttgat atagatgaat tttgctgttt gcacagattt ccaaaacctt taccatcaat
     9121 atttgaattt aaattttaat gatgattttg atgattgcca acctgcttgt gcgtaagtag
     9181 caaatatcca atattttcat tatctttttg tcaaataagt ttgagtttaa gacttgctgt
     9241 ataagacaga taagcgtgga tgttttttga cttaataata tttctgtgga taactttgct
     9301 gttttcctag ttgtctccac aaccttattg acaggcttac ggtcagtctc attccgtcga
     9361 agacaaaacc ttttgctaca ataccgtttt cctaatgata aggcagcccc atgtccaaat
     9421 ccgccgtttc cccaatgatg cagcaatacc tcggcatcaa agcgcaacat accgacaaac
     9481 tggtgtttta ccgtatgggc gatttttacg agatgttttt cgacgatgcg gtagaagcgg
     9541 caaaactttt ggatattacc ctgaccacgc gcggacaggt ggatggcgag ccggtcaaaa
     9601 tggcaggcgt gccgtttcac gccgccgaac aatatctggc gcgcctggtc aagttgggca
     9661 aaagcgtggc gatttgcgaa caggtcggcg aagtcggcgc aggcaaagga ccggtggagc
     9721 gcaaagtcgt gcgcatcgta acgcccggca cgctgaccga ttccgcattg ctggaagaca
     9781 aggaaaccaa ccgcatcgtt gccgtgtccc ccgacaaaaa atacatcggt ttggcgtggg
     9841 catcgctgca aagcggcgaa ttcaaaacca agctgacaac tgtggataaa ttggacgacg
     9901 aactggcgcg cctgcaggcg gcggaaattc tgttgcctga cagtaaaaac gcaccgcaac
     9961 ttcagacggc atcgggtgtt acgcgcctga acgcgtggca gtttgccgcc gacgcggggg
    10021 aaaaactgct gacggaatat ttcggctgcc aggatttgcg cggcttcggt ttggacggca
    10081 aagaacacgc cgttgcgatt ggcgcggcag gtgcactgtt gaactatatc cgtctgacgc
    10141 aaaacctgat gccgcaacat ttggacggcc tgtcgctcga aaccgacagc caatatatcg
    10201 gtatggatgc cgccacgcgc cgcaatctcg aaatcacgca aaccctctcc ggcaaaaaat
    10261 cgccgaccct gatgtccacg ctcgaccttt gcgctaccca tatgggcagc cgcctcttgg
    10321 ctctctggct gcaccaccct ttacgcaacc gcgcccacat ccgagcgcgc caagaagccg
    10381 ttgccgcgct ggaaagccaa tacaaacccc tccaatgccg tctgaaaaac attgcggaca
    10441 ttgaacgcat tgctgcccgc atcgccgtcg gcaacgcccg cccgcgcgat ttggcatctt
    10501 tacgcgacag tctgttcgag ttggcacaaa tcgacttgtc cgcaaacggc agcagcctgt
    10561 tggaaaccct caaagccgtt ttcccggaaa acctatccac agccgaacag ctccgccaag
    10621 ccattttgcc cgaaccttcc gtctggctga aagacggcaa tgtcatcaac cacggttttc
    10681 atcccgaact ggacgaattg cgccacattc aaaaccatgg cgacgaattt ttgctggatt
    10741 tggaagccaa ggaacgcgaa cgtaccggtt tgtccacact caaagtcgag ttcaaccgcg
    10801 ttcacggctt ttacattgaa ttgtccaaaa cccaagccga acaagcacct gccgactacc
    10861 aacgccggca aaccctcaaa aacgccgaac gcttcatcac gccggagttg aaagcctttg
    10921 aagacaaagt gctgactact caagagcaag ccctcgcctt agaaaaacaa ctctttgacg
    10981 gcgtattgaa aaaccttcag acggcattgc cgcagcttca aaaagccgcc aaagccgccg
    11041 ccgcgctgga cgtgttgtcc acattttcag ccttggcaaa agagcggaac ttcgtccgcc
    11101 ccgagtttgc cgactatccg gttatccaca tcgaaaacgg ccgccatccc gttgtcgaac
    11161 agcaggtacg ccacttcacc gccaaccaca ccgacctcga ccacaaacac cgcctcatgc
    11221 tgctcaccgg ccccaatatg ggcggcaaat ccacctatat gcgccaagtc gcgctgattg
    11281 ttttattggc acacaccggc tgtttcgtgc ctgccgatgc cgccacaatc gggcccatcg
    11341 atcaaatctt cacccgcatc ggcgcatcgg acgacctcgc ctccaaccgc tccactttca
    11401 tggtcgaaat gagcgaaacc gcctacatcc tgcatcacgc caccgaacaa agccttgttt
    11461 taatggacga agtcggacgt ggtacttcca ctttcgacgg cctcgccctc gcgcacgccg
    11521 ttgccgaaca cctgctgcaa aaaaacaaat ccttcagtct gtttgctacc cactatttcg
    11581 agctgaccta cctgcccgaa gcccacgccg ccgccgtcaa tatgcacctt tccgcgctcg
    11641 aacagggaca ggacatcgtt ttcctgcacc aaatccaacc gggtcccgcc ggtaaaagct
    11701 acggcattgc cgtcgccaaa ctcgccggcc tgcctgtacg cgcattgaaa tccgcccaaa
    11761 agcatttgaa cggactggaa aaccaagccg ccgcaaaccg tccccaactg gatattttca
    11821 gtaccatgcc gtctgaaaaa ggagatgaac cgaatgtggg caactttgtg gacaaagcag
    11881 aggaaaaaca ttttgaaggt atattggcag cagccttgga aaaactcgat cccgacagcc
    11941 tgaccccgcg cgaagcattg tcagaactgt accgtctgaa agatttgtgc aaatccgtat
    12001 cttaatttcc gttggcggaa cagcatcaaa ccatatggaa aaatctgtgg ataaacatta
    12061 tctgacaaga agtttccaaa cataaaaatg ccgtccgaac agctcagacg gcatttgtcc
    12121 attcggctta aaccttatcc atatccaaac gcataaccgt aacccattca ccgttatgga
    12181 aatgtcgccc gacaaccgcc cagccgaatg attcataaaa tatttgcaca tcaggcgtat
    12241 aaagatacaa gaactttatc cccagcgaac gcgctgcgcc tatgcagtgg gcgaccagcc
    12301 tcctgccaat gccttttccg cgatattcag gtaaaacaaa gacatcaccc aaccaatatt
    12361 catactgtgg aaaactttcc atatcatgcc gcttgaccgt agccgaaccc aacagggttc
    12421 cggaatcatc cacagccgca aaagccagcg gcagttcgtc atccttcaaa cacctgccgt
    12481 aataggcatg aatcttatcc acagaagacc acggttcaaa tccgtgccac tcctcaaaca
    12541 acgcctgaac caacctgccg atatgcccgg ctttcagccg tgtaatgaaa acagtattgt
    12601 ctacaaagag ggaattcatc ggtcaattcc ccgacgcttt cgttccccct gcgccgtaaa
    12661 ccgtattcca agcatggtcc aaacgcactc cgatttgcct cagctcttca gcctgccggg
    12721 ctttttgcgc cattgctgca ggaatttccg cttccaaacg ggcgatgtct gcttgagccg
    12781 tctgcaaacg ccggcgcgca tcttccaaat ccgactgcat cccgatgatt tttccgtcca
    12841 gattgttttg tttttgcagt aaggcacgat agccggattg gatgctgagc agattgtctt
    12901 ccgcatcccc ggcccatacg cttgtagaaa aaacaaacat cagaaaatac aatatttttt
    12961 tcatgttcaa cttccgtttg aatgctgtct gaagccgcat tccgacatca gacggcatcg
    13021 cccacgcctg tggataactt aagcgcggat gcgtttcaac acttcttctt tgccgattaa
    13081 tgccaacaca gcatcgacgc tgggggtttt cgccgtaccg cagacggcaa ggcgcagggg
    13141 catgccgagt ttgcccattt taatgccttc ttcgtcgcag aagggtttga agaggtcgtg
    13201 gatggcttcg gcattccagt cttccagccc ttcgaggcgt tcggcaaagc gcagcatacg
    13261 ggcggcggct tcatcgtccc agtgtttctg cacgtccgct tcagtaggcg tttgtttgac
    13321 gtagaagtag aggcactcgt cggcaagtgt gttcaggtct tgggcgcggt ctttgaccag
    13381 tgccaacacg tcttccaatg caggtttttc agtttcatgg atatcgcgca gagcgagacg
    13441 cggtttgacg agttcggcga gtttgccgtt gggcgtgatt ttgatgtgtt cgccgttgat
    13501 ccagtagagt ttcttcaaat ccatgcggct tggagatgga gaaacgtctt tcaaatcaaa
    13561 ccattcgata aattgttcca tcgtgaagaa ctcatcgtcg ccgtgcgccc agcccaaacg
    13621 tgccagatag ttgagcatgg cttcgggcag gatgcccatc gcgccgaaat cggtaatggc
    13681 aacggtatcg ccgctgcgtt tggagatttt tttgccttgt tcgttgagaa tcatgggcag
    13741 gtgtccgtat tcgggcaggt ttgcgccgat ggcttttaag atgttgattt gtttcggggt
    13801 gttgttcaca tggtcgtcgc cccggataac gtgggtaacg cccatgtcgt agtcgtccac
    13861 cacgacgcag aagttgtagg tcggtgtgcc gtcggcgcgt gcgataatca ggtcgtcgag
    13921 ggcttcgttg gggatggaaa tttcgccttt gaccaagtcc gcccacttgg ttacgccatc
    13981 caaaggcgtt ttgaagcgga cgacgggttg cacgccggca gggatttcgg gcagggtttt
    14041 gcccgcttcc ggccgccagc ggcggtcgta agtcgccgtg ccttcttttt cggctttctc
    14101 gcgcatggct tccaactctt ctttgctgca atagcagtag taggcatcgc ctttttctaa
    14161 aagttcggcg atgacttctt tatagcggtc gaaacggcgg gtttggtaca cgacgttgcc
    14221 ggcgttgtcg taatcgagtc cgacccattt catgccgtcg aggatgatgt tgacggattc
    14281 ggcggtagaa cgcgccaagt cggtgtcttc gatgcgcaat aaaaattcgc ctttatgatg
    14341 gcgggcaaac gcccaagaaa acagggcggt gcgaacgccg ccaatgtgca ggtagccggt
    14401 tgggctgggg gcgaaacggg ttttgacggt catgatggct ccaaaatctt taaaacggct
    14461 tattttactg gttttaccgt gcttgggcat caaaaatgcc gtccgaaccc tgcctgcgga
    14521 taagtttcag acggcatttt ctaccgcttc aatcagacag ccatcccaaa aagcggctgc
    14581 cccatttttc caaacggtag agggataacg catatccctc ttgcagcata aagatttttt
    14641 tcttatttcc cgcatcaaac cgcgtggtcg gggtggcaga catataaacg cggacaccca
    14701 aatcctccgc catttccgcc gcccgcgcca aatggtaggg atcgctgaca atcaccacgc
    14761 tgtcaatacc gttggcacgc aaaaccggac ggatgttgtt caggttttca taagtgttgc
    14821 gcgaagtgtt ttcaaacagg atgttgcgcg ccggaacccc ctgtttgagc gcgtaccgcc
    14881 gcccgacctc ggcttcggtc atatagcctt ttttggttcg ccctcccgta aacacgattt
    14941 tgcctaccct gcggctctga taaagcgcga tggcgtggtt gatgcgttcg cggaaaaccg
    15001 gggaagggcg tttgtcccac gcggcggcgc ccaacaccag cgcggcatcc gcccggacat
    15061 acggcggcaa aacctgcccg cccgtccgat aaaccgccca aacggatgag gcaaacacca
    15121 gcaaaagcgg aaaaacactc aaacagaaac cgcccaacag gtaatagcgc aagccgttgc
    15181 ggctgcaaaa cagccgtttg ttcacaatat cgcttcgata ttttccagag gcctgccgac
    15241 agccgcctta ccgttcgcca aaacaatcgg acgctccaac agggcgggat gctcggcgat
    15301 ggcacgcagc agcgcgtcat tgtccaaatc ggggttgtcc aaacccaatt ccttgtacaa
    15361 atcatctttc acacgcatca tcccgcgcgc cgatgccaag cccaatttgt tgaaaatatc
    15421 cttcaattcg gacaagtcgg gcggcgtatc caaatatttg accacttcgg cagcaatgcc
    15481 gcgttcttcc aatagggaca aggcggcacg cgatttgctg caacgcggat tgtggaaaat
    15541 tttgatttca ggcatgacat ttccttgctt ctcaacaatc cccttattat cggcttacgc
    15601 agggttttac tcaatatccc gcccccaacc gtaccaaacg gtttacaata cccgaatcga
    15661 catacaaagg acaaaacgat gaaatacttg aatcttgccg caatcgccct tgccgccaca
    15721 tttgccgcac ataccgcctc ggcagacgaa cttgccggat ggaaagacgg taccgcgcaa
    15781 agcctgcaat cgctcaaagc ccccgtacgc atcgtcaacc tgtgggcgac ttggtgcggc
    15841 ccgtgccgaa aagagatgcc cgccatgtcc aaatggtaca aagcgcagaa aaaaggcagc
    15901 gtcgatatgg tcggcatcgc gctcgacaca tccgacaata tcggcaactt cctcaaacaa
    15961 actcctgttt cctacccgat ttggcgttac accggggcga acagccgaaa ctttatgaaa
    16021 acctacggaa acactgtcgg cgtactgccc tttaccgtcg tcgaagcacc gaaatgcgga
    16081 tacaggcaga ccattaccgg ggaagtgaac gaaaaaagcc tgaccgaagc cgtcaaactc
    16141 gcccattcaa aatgccgtta aacgccggat gccgtctgaa gccgcttcag acggcatttt
    16201 tcccgcccga ccttcatatc cgccaaactt atccactatc taaaagcagg cggaatcttt
    16261 ataatcggca ctgtcttacc tattgttcag acggcatatc cctgcggacg caaccgcccg
    16321 aaacgatatg ccgcccttcc ttacaggacc tcctatgatc cgtttcgaac aagtttccaa
    16381 aacctatccc ggcggttttg aagccctgaa aaacgtcagc ttccaaatca acaaaggcga
    16441 gatgattttt atcgcaggac actccggttc aggcaaatcc accgtcctca agctgatttc
    16501 gggcattacc aaaccaagca ggggcaaagt ccacttcaac aaccaagacc tcggcacact
    16561 gaccgacaac caaatcggct ttatgcgcca acacatcggc atcgtgttcc aagaccacaa
    16621 aatcctctac gaccgcaacg tcctgcaaaa cgtcatcctg ccgcttcgga ttatcggcta
    16681 tccgccgcgc aaagccgaag aacgcgcccg catcgccatc gaaaaagtcg gcctgaaagg
    16741 acgagaattg gacgatcccg taaccctctc cggcggtgaa caacaacgcc tgtgcatcgc
    16801 ccgcgccgtc gttcaccagc ccggcctgct gattgccgac gaaccctccg ccaacctcga
    16861 ccgcgcctac gcgctcgaca tcatggaatt gttcaaaacc ttccacgaag cgggaacaac
    16921 cgtcatcgtt gccgcccatg acgaaaccct gatggcggac tacggacacc gcatcctgcg
    16981 cctctcgaaa ggacgactcg catgagcatc atccactacg cctcgctgca catcgaatcc
    17041 gcccgcaccg cgctcaaaga gcttctgcgc caacccttcg gcacgctgct caccctcctg
    17101 atgctcgccg tcgcgatgac cctgccgctg tttatgtatt tgggcattca aagcgggcaa
    17161 agcgtgttgg gcaaactcaa cgagtcgccg caaatcaccg tctatatgga aaccgccgcc
    17221 gcacaaagcg acagcgatac cgtccgcagc ctgctggcgc gcgacaaacg gatcgccaac
    17281 gtccgcttca tcggcaagga agacggcttg gcggaattac agtccaacct cgaccaaaat
    17341 ttggtttcga tgctcgacgg caacccgctg cccgacgcat ttatcgttac ccccgacccc
    17401 gcgacaacgc ccgcgcaaat gcaggcaatc taccgggaca ttaccaaact gcctatggtc
    17461 gaatccgcgt ctatggatac cgaatgggtg caaacgctgt accaaatcaa cgaatttatc
    17521 cgtaaaattt tatggtttct ttccctgacg ctgggtatgg cgttcgtcct tgtcgcacac
    17581 aacaccatcc gcctgcaaat cctcagccgc aaagaagaaa tcgaaatcac caaactcttg
    17641 ggcgcgcccg catcgttcat ccgccgcccc ttcctttatc aggcaatgtg gcagagcatc
    17701 ctttccgccg ccgtcagcct ggggctttgc ggttggctgc tttccacagt gcgccccttg
    17761 gtcgatgcca tcttcaaacc ctacgggctc aatatcggct ggcgtttctt ttatcctgaa
    17821 gaaatcgcgc tggtgttcgg cttcgtcatc gcgttgggcg tattcggcgc gtggcttgcc
    17881 accacccagc acctgctcgg cttcaaagcc aaaaaataaa acaccgtcaa aaatgccgtc
    17941 cgaacccgtt ttcagacggc atttcaattt gccagtataa tggcgcattt ttccaacaag
    18001 gaacctacca tgctgacctc ggaacaagta aaagccatga ttgaaggcgt ggcaaaatgc
    18061 gaacatatcg aagtagaagg cgacggacac cattttttcg ccgtcatcgt ttcatcagaa
    18121 tttgaaggca aggcacgcct cgcgcgccac cgcctgatta aagacggact caaagcccaa
    18181 ctggaaagta acgaactgca cgcactttcc atttcggttg ccgccactcc ggcggaatgg
    18241 gcagccaaag cacaataatc gccacacaaa aatgccgtca gaaacagcac aacgtttcag
    18301 acggcatttt ttatatcaaa ccgcttacgc gccgcgtttt tccaaagcgg ctacggcagg
    18361 caactcttta ccttccaaga actcaagaaa cgcgcctccg ccggtagaaa tatagccgat
    18421 ttggtcggta acgccgaatt tagcaatcgc cgccagcgtg tcgccaccgc ctgcaatcga
    18481 gaatgctttg ctttgggcaa tggcttcggc aagagctttc gtgccgcctg cgaactggtc
    18541 aaactcgaac acgccgaccg gtccgttcca aacgaccgtg tcggcggctt taagcaaatc
    18601 ggcaagcgcg gcggcagatt tcgggccgat gtccaaaatc atctcgtctt cggcaacgtc
    18661 ggcaatgtct tttaccaccg cttcggcatc ggcggcaaag gctttggcaa cgacgacatc
    18721 ggtcggcagc ggcacagaac ctcctttggc cgccattttc gccataattt ttttggattc
    18781 ttccaccaaa tcgtgttccg ccaaagattt gccgatggct ttaccttccg ccaacaggaa
    18841 ggtgttggcg ataccgccgc cgacgatgag ttggtcgact ttgtccgcca gcgattcgag
    18901 gatggtcagc ttggtggaca ctttgctgcc ggcaacgatg gcaaccatcg ggcgcgcggg
    18961 ctgtttcaag gctttgccca aagcgtcgag ttcgcccgcc atcaatacgc cggcgcaggc
    19021 aacgggagcg gcttgggcga cggcttcggt cgaggcttgg gcgcggtgcg cggtgccgaa
    19081 cgcgtcattg acgaacacgt cgcacaaaga agcgtaggct ttgcccagtt ccaaatcgtt
    19141 tttcttctcg cctttgttga tacgcacgtt ttgcagcatc acgacatcgc ccgcgttcaa
    19201 agccggtttg ttttcgcgcc agtcgttcaa tactttcacg tttttgccca acaggccgcc
    19261 caaatgcgcg gcaacgggcg caacgtcgtc ttcggggtga aactcgcctt cggtcgggcg
    19321 gcccaagtgg gtcatcacga tgacggacgc gccgttgtcc acgcagtatt taacggacgc
    19381 aatcgaggcg cggatacggg tgtcgtcgct gattttgccg tctttgaacg gcacgttcat
    19441 atcggcgcgg atgaggacgg ttttgccctg cacgttttgt tcggtcagtt ttaaaaatgc
    19501 cataatcagt ccttttcaat cagtgtttgc gatacagaaa caat
//
LOCUS       DAWEYF010000024        18191 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.024, whole genome shotgun sequence.
ACCESSION   DAWEYF010000024 DAWEYF010000000
VERSION     DAWEYF010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.024"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(135..470)
                     /locus_tag="WGN93_000589"
     CDS             complement(135..470)
                     /locus_tag="WGN93_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ0226526.1"
                     /translation="MFKDWKEHTALVKKSFGELGKSHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            599..1504
                     /gene="mtrA"
                     /locus_tag="WGN93_000590"
     CDS             599..1504
                     /gene="mtrA"
                     /locus_tag="WGN93_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HEZ0226527.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1566..2054)
                     /locus_tag="WGN93_000591"
     CDS             complement(1566..2054)
                     /locus_tag="WGN93_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ0226528.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2201..3103
                     /locus_tag="WGN93_000592"
     CDS             2201..3103
                     /locus_tag="WGN93_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ0226529.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLAEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3144..4274)
                     /locus_tag="WGN93_000593"
     CDS             complement(3144..4274)
                     /locus_tag="WGN93_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0226530.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4479..7103
                     /gene="alaS"
                     /locus_tag="WGN93_000594"
     CDS             4479..7103
                     /gene="alaS"
                     /locus_tag="WGN93_000594"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ0226531.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALVKGGKTLGGEI
                     IFKLYDTYGFPYDLTADICRERNIEPDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVNELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSEQA
                     IVLLAAVNEGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLASVESWLCQKLS"
     gene            7165..7896
                     /locus_tag="WGN93_000595"
     CDS             7165..7896
                     /locus_tag="WGN93_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226532.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            8205..11018
                     /locus_tag="WGN93_000596"
     CDS             8205..11018
                     /locus_tag="WGN93_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ0226533.1"
                     /translation="MKTLLQLQTAAQNFAAYYKDQTDERREKDTFWNEFFAIFGIDRK
                     NVAHFEYPVKDPADNTQFVDIFWEGIFLAEHKSANKNLTKAKEQAERYLQEIGRTKPS
                     ALPEYYAVSDFAHFHLYRRVPEEGAENQWQFPLEELPEYITRGVFDFMFGIEAKVRQI
                     QEEANIQAAAAIGRLHDALKEEGIYEEHELRLFITRLLFLFFADDSAVFRRNYLFQDF
                     LENCKEADTLGDKLNQLFEFLNTPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTA
                     KQHRALIDCGNFDWRNISPEIFGTLFQSVMDAQERREAGAHYTEAANIDKVINGLFLE
                     NLRAEFEAVKALKRDKAKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDII
                     AEALKDKAGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDG
                     EVACHTLPLEDAAEIIHANSLRTPWQAADYIFGNPPFIGSTYQTKEQKNDLESICGHI
                     KGYGLLDYVCNWYVKAAGIMAQHPQVQTAFVSTNSICQGQQVEILWGSLLKQGIEIHF
                     AHRTFQWTSQAAGKAAVHCIIVGFRQKPQMPSEKNLYDYPDIKGEPVKHTAANINPYL
                     IDAPDLIITKRRSQISGEIEMLYGNKPTDGGNLILSTAEKDALIAAEPLAEQYTRPFV
                     GAEEFINGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKAMREASSKAATQKKAA
                     TPWLFDEIRQPSEGNYLIIPRVSSESRRFVPIDYLSHQIIISDSSFMLPNATLYHFGI
                     LSSTMHNAFMRTVAGRLKSDYRYSNTVVYNNFPFPESCRMPSENDCSDPLRAAVEAAA
                     QAVLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALDKAVDKAYGYKTGK
                     NTDDEAERTAFLFELYRKAAAIA"
     gene            complement(11820..12503)
                     /locus_tag="WGN93_000597"
     CDS             complement(11820..12503)
                     /locus_tag="WGN93_000597"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ0226534.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            12800..15103
                     /gene="parC"
                     /locus_tag="WGN93_000598"
     CDS             12800..15103
                     /gene="parC"
                     /locus_tag="WGN93_000598"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ0226535.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            15124..16641
                     /locus_tag="WGN93_000599"
     CDS             15124..16641
                     /locus_tag="WGN93_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ0226536.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQALKMPRFSAVADITMIGVLTYLF
                     GGIDSGFGILILPFVVCSCLLSYGRYPLLYASYAAILLIFNAIADGDIGKYPHISDAR
                     TASATFILVAASYLSAIFTSLSVRYIDSAGQLARDNHLAYRRIKGLSQTVLERVQEAV
                     VVINTEGLAVLFNRKAKDLFPALEIGRRADLSDSAAELWDQASPHTFEYVLGTLGLTA
                     RIRAVPMNKEPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     NDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI"
     gene            16693..17160
                     /locus_tag="WGN93_000600"
     CDS             16693..17160
                     /locus_tag="WGN93_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ0226537.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            17264..18016
                     /locus_tag="WGN93_000601"
     CDS             17264..18016
                     /locus_tag="WGN93_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ0226538.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         4559 a         5256 c         4392 g         3984 t
ORIGIN      
        1 ttcacgctta ccccttgttt ctcaaatgcc gtctgaaaaa aacggctgta tatgttgtct
       61 gcaaaatatc gggaagcata acagacaaaa tgccgtctga aatattttca gacggcattt
      121 caatccgatt cggattattt ttgcgtttca accgcttcca atgcacgcag ggcgtaagtg
      181 taagcggcac cggcattcag ggcgatggcg gttgccaatg cgccggcgat ttcgctgtcg
      241 gtcgcaccgg ctttggcggc ggctgcggcg tgaacgctga tacagctttc gcaacgggtg
      301 gtaatggcaa cggcgatggc aatcagttcg cgcgttttgg catccaatgc ttcggcggcg
      361 gcggcctgtt ccaatgcgcc gtatgcctgc agcattttag gatgggattt acccagctcg
      421 ccgaacgatt ttttaaccaa tgcggtatgt tctttccaat ctttaaacat tttcttttcc
      481 tttctcttgc gtttaaccct gatacgcgct tgcgtatctg ttttcgatgt gcgtattatt
      541 gcaattattc agttgtgttt ctcgtttaat catctcattt catggttcaa aaagatttat
      601 ggacattctg gacaaactgg tcgatttcgc ccaattgacg ggcagtgtgg atgtgcagtg
      661 ccttttgggc ggacaatggt cggtacggca tgaaaccttg caacgcgaag gactggtaca
      721 cattgttaca tcgggcagcg gctatctctg catcgacggc gaaacttccc cgcgtccggt
      781 cagtacaggg gatattgtat ttttcccgcg cggcttgggt catgtgttga gccacgacgg
      841 aaaatgcgga gaaagtttac aaccggatat gcggcagcac ggtgcgttta cggtcaagca
      901 gtgcggcaac ggacaggata tgagcctgtt ttgcgcccgt ttccgctacg acacccacgc
      961 cgatttgatg aacgggctgc ctgaaaccgt ttttctgaac attgcccatc cgagtttaca
     1021 gtatgtggtt tcaatgctgc aactggaaag caaaaaacct ttgacgggga cggtttccat
     1081 ggtcaacgca ttgtcgtccg tcctgctggt gcttatcctg cgcgcctatc tcgaacagga
     1141 taaggatgtc gaactctcgg gcgtattgaa aggttggcag gacaaacgtt tgggacattt
     1201 aatccaaaag gtgatagaca aaccggaaga cgaatggaat gtcgacaaaa tggtggcggc
     1261 tgccaatatg tcgcgcgcgc aactgatgcg ccgtttcaaa agccgggtcg gactcagccc
     1321 gcacgccttt gtgaaccata tccgcctgca aaaaggcgcg ttgctgctga aaaaaaaccc
     1381 agattcggtt ttgtcggtcg cactgtcggt aggctttcaa tcggaaacgc acttcggcaa
     1441 ggcgttcaaa cggcaatatc acgtttcgcc gggtcaatac cggaaagaag gcgggcaaaa
     1501 ataaatcggg gcttcaaacg caaatgccgt ctgaaaaggc tttcatacgg catttgcgta
     1561 ccgcgtcatt tcaagggctg catcttcatc acttccatca aaaagttggt aaatgcgggg
     1621 ttgttgggtt tgacatccat atttttccaa cgctgctgcc agccgcgcaa ggcattctgg
     1681 atatacagct tggactgttc cgtattgatt gcgccccgct ggctgtctat cgccgaacgc
     1741 aggtagattt catacatact gtcatcgacg gcattgcgtc cgaccaggcg ttttctgaag
     1801 ttgttcagat attgcgccgc ctgaaccttg gtcattttac cgatacccac ctgatagccc
     1861 aagcgcgtcg cttcatcgct gattttggca acatccgtcc aatgcgaaga ggcaaggcgg
     1921 aaaccttttg caggtgcttc cgttttgacg gtattgatag gattcacggg gatttccgtc
     1981 aatgtgggca cataaataga ctggcagccg gaaagaactg ccacaatgga aagagggata
     2041 aggtattttt tcatgccccc attataatca agtttgcctt gagaaaacaa attgttcggc
     2101 aagaaaaata aaatttcggc atcagaagca ggcaaaaaca cattccacaa gccttgccgc
     2161 aaggtttaca atccgaccgt ccttatcgca acgaccgttt atggataccg caaaaaaaga
     2221 cattttagga tcgggctgga tgctggtggc ggcggcctgc tttaccatta tgaacgtatt
     2281 gattaaagag gcatcggcaa aatttgccct cggcagcggc gaattggtct tttggcgcat
     2341 gctgttttca accgttgcgc tcggggctgc cgccgtattg cgtcgggaca ccttccgcac
     2401 gccccattgg aaaaaccact taaaccgcag tatggtcggg acgggggcga tgctgctgct
     2461 gttttacgcg gtaacgcatc tgcctttggc caccggcgtt accctgagtt acacctcgtc
     2521 gatttttttg gcggtatttt ccttcctgat tttgaaagaa cggatttccg tttacacgca
     2581 ggcggtgctg ctccttggtt ttgccggcgt ggtattgctg cttaatccct cgttccgcag
     2641 cggtcaggaa acggcggcac tcgccgggct ggcgggcggc gcgatgtccg gctgggcgta
     2701 tttgaaagtg cgcgaactgt ctttggcggg cgaacccggc tggcgcgtcg tgttttacct
     2761 ttccgtgaca ggtgtggcga tgtcgtcggt ttgggcgacg ctgaccggct ggcacaccct
     2821 gtcctttcca tcggcagttt atctgtcgtg catcggcgtg tccgcgctga ttgcccaact
     2881 gtcgatgacg cgcgcctaca aagtcggcga caaattcacg gttgcctcgc tttcctatat
     2941 gaccgtcgtt ttttccgctc tgtctgccgc attttttctg gccgaagagc ttttctggca
     3001 ggaaatactc ggtatgtgca tcatcatcct cagcggcatt ttgagcagca tccgccccac
     3061 tgccttcaaa cagcggctgc aatccctgtt ccgccaaaga taaaaaatgc cgtccgaaca
     3121 tccttcagac ggcatatcgg gctttatttc cccgccttca catcctgcca ctggcgcacc
     3181 ataaacttca atgccgccgg ctggataggc accatgataa agctgttttt caaatcctcc
     3241 tcggttggga aaatcgtatt gtcgttttta aattcgtctt ccatcagctc acgcgccggc
     3301 ttgctcgaag gcgcataagt aacgaaattg ccgtttttcg ccgacacttc cgggtcgagg
     3361 aagtcgttga tgtatttgtg cgcgttggcg acgtttttcg catctttcgg aatcacgaaa
     3421 gaatccaccc aaatccccac gccctctttg ggcatcatca cgcggatttt ttccttgccg
     3481 cccgcttctt cggcacggcg tttggcgatg ttcaaatcgc cgccgaaacc gattgttacg
     3541 caggtatcgc cgcgcgccaa atcatcgata aagccggacg aagtaaagcg tttgatattg
     3601 gggcggtttt tcttgagcag ggcggttgcc tccctgatgt cttccgtatt gctgctgttc
     3661 gggtttttac ccaaatagtt caacaccata ggatagattt ccgccgcgct gtctaaataa
     3721 ctgataccgc attgtttgag tttggacgtg tattcggggt cgaacaccaa atcccactgg
     3781 ttgtccggca gcttgtccgt acccaaagcc tttttcacgc gttcggtatt gatggcgaag
     3841 gtatttgtcc cccaataaaa cggcacggcg tattcgtggc cgggatcgac cccgtccatc
     3901 agcctcatca tttcgggatt gaggtgttta taattgggaa tcagcgattt atcgattttc
     3961 tgatacgcac ctgccttaat ctgcctgccc acaaacgcat tggacggcgc gacaatgtcg
     4021 taaccggatt ttccggtcag caccttgctt tccagcgttt catcgctgtc gtacacatca
     4081 taagtaacct tgatgccgtt tttcttttca aaatcggcaa cggtttccgg atcgacgtat
     4141 tccgaccagt tgtaaatttt caatacgttt cggttttccg ccggcgccgg tttttcggca
     4201 ggcggtttgt ccgaaccgcc gcacgctgca agcagcaaag cagtcaggac ggcgagtggc
     4261 agatgtttgg ccattatcat tccttgcata tcgggttgga gaaagcggtc attatagccg
     4321 atattggcaa cagggcttca gacggcattc aaaatcccgc cacacccttc cgaaaaccgc
     4381 cgcttccata gctagaaaca gggatttgcg gtaagatacc gccgttcgtt ttccctgctt
     4441 ttaccatgac aagacatttg agagacattg aaaaaattat gaaaacctcc gaactgcgcc
     4501 aaaaattcct aaaatttttt gaaaccaaag gccacaccgt cgtccgctct tccagcctcg
     4561 tgccgcacga cgacccgacc ctgttgttta ccaacgcagg catgaaccag tttaaagacg
     4621 tatttttagg tttcgacaaa cgcccgtaca gccgcgccac caccgcgcaa aaatgcgtac
     4681 gcgcaggcgg caagcacaac gacctggaaa acgtcggcta caccgcccgc caccacacct
     4741 tctttgaaat gatgggcaac ttctccttcg gcgactactt caaacgcgac gccatccact
     4801 ttgcttggga atttctgact tcccccgaat ggctcaacat ccctaaagac aaactgttgg
     4861 cgaccgttta cgcggaagac gacgaagcct acaacatctg gttgaacgaa atcggtatgc
     4921 cgtccgagcg catcgtccgc atcggcgaca acaaaggcgc gaaatacgcg tccgacaact
     4981 tctggcaaat gggcgacacc ggcccttgcg gcccctgctc cgaaattttc tacgaccacg
     5041 gcgaagaaat ttggggcggc attcccggca gccccgaaga agacggcgac cgctggatcg
     5101 aaatttggaa ctgcgtattc atgcagttca accgcgacga acaaggcaat atgaatccgc
     5161 tgcccaagcc gtccgtcgat accggcatgg gcttggaacg catggccgcc gtcatgcagc
     5221 atgttcacag caactacgaa atcgacttgt tccaagacct gctcaaagcc gttgcccgcg
     5281 aaaccggcgc gccgttcagt atggaagaac ccagcctgaa agtcatcgcc gaccacatcc
     5341 gctcctgctc gttcctgatt gcagacggcg tcttgccttc caacgaaggc cgcggctacg
     5401 tattgcgccg cattatccgc cgcgccgtgc gccacggtta caaactgggt caaagcaaac
     5461 cgttcttcca caaactcgtt gccgatttgg tcaaagagat gggcggtgcc taccctgaat
     5521 tgaaagaaaa acaagcccaa atcgaagaag cattgaaaaa cgaagaaagc cgttttgccc
     5581 aaacgctgga aaccggtatg gctttgttgg aaaacgcgct ggtcaaaggc ggcaaaacac
     5641 tcggcggcga aatcatcttc aaactctacg atacctacgg tttcccatac gacttgactg
     5701 ccgacatctg ccgcgaacgc aatatcgaac cggacgaagc aggcttcgag cgcgaaatgg
     5761 aagcccaacg cgcacgcgca cgcgccgccc aaagcttcaa agccaacgcc caactgcctt
     5821 atgacggtca agacaccgag tttaaaggtt atagcgaacg ccaaaccgaa tccaaagtcc
     5881 tcgccctcta caaagacggc gagcaagtca acgaattgaa cgaaggcgac agcggcgcag
     5941 tcgtcatcga ctttaccccg ttctatgcag aatccggcgg ccaagtcggc gatgtcggct
     6001 atatcttctc aggcgaaaac cgctttgaag tacgcgatac ccaaaaaatc aaagcggccg
     6061 tattcggtca attcggcgta caaacttcag gccgtctgaa agtcggcgac agcgttaccg
     6121 ccaaagtgga tgacgaaatc cgcaatgcca atatgcgcaa ccacagcgcg acccacctga
     6181 tgcacaaagc cctgcgcgac gtattgggcg gacacgtcga acaaaaaggc tctttggtta
     6241 ccgccgaatc cacccgtttc gacatttccc atcctcaagc ggtcactgcc gaagaaatcg
     6301 ccgaagtcga acgccgcgtc aacgaagccg ttttggcgaa cgttgccgtc aatgcagcca
     6361 ttatgagcat ggaagacgcg caaaaaaccg gcgcgatgat gctcttcggc gaaaaatacg
     6421 gcgaagaagt gcgcgtactg caaatgggcg gtttctctac cgaattgtgc ggcggcacac
     6481 acgtttcacg caccggcgac atcggcctct tcaaaatcat cagcgaaggc ggtattgccg
     6541 caggcgtgcg ccgtatcgaa gccatcaccg gcctgaacgc actcaaatgg gcgcaagagc
     6601 aagagcgttt ggtgaaagac attattgccg aaaccaaagc ccaaaccgaa aaagacgtac
     6661 tggcaaaaat ccaagcaggc gcggcacacg ccaaagcatt ggaaaaagaa ttggcacgcg
     6721 ccaaagccga actcgccgtc cacgcaggcg ccaaactctt ggacgatgca aaagacttgg
     6781 gcgcagccaa actcgttgcc gcccaaatcg aagccgacgc agccgccctg cgcgaaatcg
     6841 taaccgacct gaccggcaaa tcagaacaag ccatcgtatt gctcgccgca gtcaacgagg
     6901 gcaaagtttc cctgtgcgca ggcgtatcca aagccctgac cggcaaagtg aaagcaggcg
     6961 atctggtcaa atttgcagcc gaacaagtcg gcggcaaagg aggcggccgt cccgacttgg
     7021 cgcaggccgg cggcacggat gccggcaaat tgcctgaaat gctggcaagc gtggaaagct
     7081 ggctttgtca gaaattaagt taaatttaaa tcttaataag ccatttgagt cttgttcaaa
     7141 tggcttatat tttggattgt tagaatgaat actaaaacag agttacaaaa acttttagaa
     7201 gaggatatat caactttaac agaaacacta atttgtgcag atgctcttcc tccaagatat
     7261 gtacgtagca ttgcaactcc tattgtccgt cgatggttaa ttgacaaaca attaaatatt
     7321 ctcgcaaaag aaataggttt aactatagaa ttgcccatcc ttgatacaag tttggtattt
     7381 gaaaaattgt caaccttaga gaataaagtt aatttttata tggctggtgg agtttattta
     7441 ggcggagaat ttattagctc tatatatcat tcatcacaag aattttctgg tgaaccaata
     7501 atctatgctg aaccaaatat aattttatgt cctgctgaaa aatttttaac tttaaaacga
     7561 gttttccata atggaaatat ttttaatatg aatcagataa ttactttttt atccaataaa
     7621 caaggaggag tacattttga taaaaattac gataaatata aaacttggca agttgctata
     7681 gaaaaagcag caaatttttt aaaactcggt aatccatata atgaagataa attatctctt
     7741 agtgaagaac atgatactat tttagtagtt ttaccattag aaaaaggata tgaatggaat
     7801 tgtcttgaga tagaagtact atccgctgct caatctctag caaatatcta ttgcaacaaa
     7861 gttcgcctca tagatggtca tgtttggaag gaataaaaga aaaagcatag ttggtaattt
     7921 ttagttacgt agggtgggct tcagcccacc gttttttcat ttttgattgt tgattggtgg
     7981 gctaaagccc accctacggt tactaaaatc ccgtcattac ctcgcaggcg ggaatccggt
     8041 ttgttcggtt tcggtttttt agggacagtg ccgcaacatt aaatttccag attcccactt
     8101 tcgcacaaat aacagcgcaa atagggcaaa gataaggata tggggggttt tttctttgaa
     8161 tttactatac aattcgcccg tccccgttat agaaacccaa gccgatgaaa accctgctcc
     8221 aactccaaac cgccgcacaa aacttcgccg cctactacaa agaccaaacc gacgagcgcc
     8281 gcgagaaaga caccttctgg aacgaatttt tcgccatttt cggcatcgac cgcaaaaacg
     8341 tcgcccactt cgaatacccc gtcaaagacc ctgccgacaa cacccaattc gtcgatatat
     8401 tttgggaagg catcttcctt gccgaacaca aatccgccaa caaaaacctg accaaggcca
     8461 aagagcaggc ggagcgttat ttgcaggaaa tcgggcgcac caagccctcc gcgctgcccg
     8521 aatattacgc cgtcagcgat tttgcccatt tccaccttta ccgccgcgta cctgaagaag
     8581 gcgcggaaaa ccaatggcag ttcccattgg aagaattgcc cgaatacatc acgcgaggcg
     8641 ttttcgactt catgttcggc atcgaagcca aagtccgcca aattcaagaa gaagccaaca
     8701 ttcaagcggc ggcggccatc ggcaggctgc acgacgcgct caaagaagaa ggcatttacg
     8761 aagaacacga gctgcgcctc ttcatcacgc gcctgctttt cctctttttt gccgacgaca
     8821 gcgccgtttt ccggcgcaac taccttttcc aagacttttt agaaaactgc aaagaagccg
     8881 acacgctcgg cgacaagctc aaccaactct ttgaatttct caacacaccc gaccaaaagc
     8941 gcagcaagac ccaaagcgaa aaatttaaag gtttcgaata cgtcaacggc ggcctgttta
     9001 aagaacgcct gcgcaccttc gacttcaccg ccaagcagca ccgcgcctta atcgactgcg
     9061 gcaatttcga ctggcgcaac atcagccccg aaatcttcgg cacgctcttc caatccgtca
     9121 tggacgcgca agagcggcgc gaagcaggcg ctcactacac cgaagccgcc aacatcgaca
     9181 aagtcatcaa cggccttttt ttagaaaacc tgcgcgccga atttgaagcc gtcaaagccc
     9241 tcaaacgcga caaagccaaa aaactcgccg ccttctacca aaaaatccaa aacctgcaat
     9301 tcctcgaccc tgcctgcggc tgcggcaact tcctgatcgt tgcctacgac cgcatccgcg
     9361 cccttgaaga cgacatcatc gccgaagcgc tcaaagacaa agcaggcggc ctgttcgaca
     9421 gcccgtccgt ccaatgccgt ctgaaacagt ttcacggcat cgaaatagac gaatttgccg
     9481 tcctcatcgc ccgcaccgcc atgtggctca aaaaccacca atgcaacatc cgcacgcaaa
     9541 tccgcttcga cggcgaagtc gcctgccata cgctgccgct cgaagacgcc gccgaaatca
     9601 tccacgccaa cagtctccgc acaccttggc aggcggcgga ctacatcttc ggcaatccgc
     9661 cctttatcgg ctcgacctac caaaccaaag agcagaaaaa cgacctcgaa agcatctgcg
     9721 gccatatcaa aggctacggc ctgttggatt acgtctgcaa ctggtatgtc aaagccgccg
     9781 gcatcatggc gcagcatccc caagttcaga cggcatttgt ttccaccaat tccatctgcc
     9841 aaggccagca ggtcgaaatc ctttggggca gccttttgaa gcaaggcatc gaaatccact
     9901 ttgcccaccg caccttccaa tggacgagcc aagccgcagg caaagccgcc gtccactgca
     9961 tcatcgttgg cttccgccaa aagccgcaaa tgccgtctga aaaaaacctc tacgactatc
    10021 ccgacatcaa aggcgaaccc gtaaaacaca ccgcggccaa catcaatccg tatctgattg
    10081 acgcgcccga tttgattatt accaagcgca gaagccaaat cagcggggaa attgaaatgc
    10141 tttatggtaa taagccaacc gacggcggca accttatcct ctcaaccgcc gaaaaagacg
    10201 ccctgattgc cgccgaaccc ttggcggaac aatacacccg cccctttgtc ggcgcagagg
    10261 aatttatcaa cggcaaaacc cgttggtgcc tgtggtttca cggcgtatcc gatgtcaaac
    10321 gcaaccacga cctgaaacaa atgccccaag tccaagctcg tattcaggcg gtcaaagcca
    10381 tgcgcgaagc cagcagcaaa gccgccacgc aaaaaaaagc agcgaccccg tggctcttcg
    10441 acgaaatccg tcaaccttca gagggcaatt atctaattat tccacgcgtc tcatccgaaa
    10501 gccgccgttt cgtccccatc gattatctgt cgcatcaaat catcatcagc gattcatcgt
    10561 ttatgctgcc aaacgccacc ctctaccact tcggcatcct cagctccacc atgcacaacg
    10621 cctttatgcg tactgttgcc ggccgtctga aaagcgatta tcgctattcc aataccgtcg
    10681 tgtacaacaa cttccccttc cccgaaagct gccggatgcc gtctgaaaac gactgctccg
    10741 acccgctccg cgccgccgtc gaagccgccg cccaagccgt cctcgacgcg cgcggacaat
    10801 accgccgaga agcgcgggaa gccggtttgc ccgagccgac cctcgccgaa ctctatgcgc
    10861 ccgacgcagg ctataccgcc ctagacaaag cccacgccgc cctcgacaag gcagtcgata
    10921 aagcctacgg ctacaaaaca ggcaaaaaca ccgacgacga agccgaacgc accgccttcc
    10981 tgttcgagct gtaccgcaag gcggcggcaa ttgcgtagta gttgcgtagt agttgcgtag
    11041 gatagttgcg tagggtgggc ttcagcccac caactcccac caactcccac catcttcacc
    11101 ctaaaacccc gtcatctccg caaaagcaat tgcgtagggt gggcttcagc ccaccgtttt
    11161 tcttcatttt cggttgttga ttggcaggct gaagcccacc ctgcggttac aaaaatcccg
    11221 tcattcccgc gcaggcggga atccagacct ttcggggcgg aaacttatcg gataaaacga
    11281 tttcccctgc atcctggatt cccactttca tgggaatgac gggatatagg tttccctacg
    11341 gacgtgttca gattcccgcc ttcgcgggaa tgacggcgga gaagtttctg tctttccgat
    11401 aacttaccgt aacttaaaat cccgtcatta ccgcaaaagc agttgctacg gttacaaaaa
    11461 tcccgtcatc cccacgaaag cgaaaatcct gcctgtcgga tttcggtttt ttcgggcgtt
    11521 tcgggaactt ataaatcgtc attcccgcgc aggcgggaat ccagaacgcg ggacggcggc
    11581 aatattcaaa ggttgtctga aaattcagag gttctagatt cccgcctgcg cgggaatgac
    11641 ggcggagcgg tttctgcttt tccgataaat gaccgcaacc taaaacccat ccttcccacg
    11701 aaaacagaaa aacaaaaacc taaaatcccg tcgttctcgc gaaagcagtt gctacgttta
    11761 ccgtcaaaaa tgccgtctga acgctcaagc cttcagacgg cattttttat ttcacaccct
    11821 tacaggtaga atttttcgat gactttcaaa ttgtcgtcca atttgtacac caacggctgg
    11881 ccagtcggga tttccaagcc catgatgtct ttgtcggaaa tgccctcgat gtgttttgcc
    11941 agcgcgcgca gggagttgcc gtgcgccgcc accaagacgc gtttgccgct caaaatcgcg
    12001 ggggcgattt ggtcttccca aaacggtaat acgcgctcca gcgttacttt caggttttcg
    12061 ccgtcgggta cgacatcggc aggcagatgg gcatagcggc ggtctttgtg tgcggaaaac
    12121 tcatcgtctt tgtccaaaag cggcggcagg gtgtcgtagc tgcgccgcca gatgcggact
    12181 tgctcgtcgc cgtattgttc ggcggtttgt tttttgtcca aaccttgcag ttggccgtag
    12241 tggcgttcgt tcagccgcca tgttttgatt tgcggtacga acagttggtc ggattcttcc
    12301 aaaacgatgt tgcaggtctt aatcgcgcgg gtcaggacgg atgtgaaggc gatgtcgaac
    12361 tcatagccgt tttctttcag ttttttaccg gcggcggcag cctcggcaag cccctgctcg
    12421 ctcagcttca cgtcgcgcca gcctgtaaac aggtttttcg cgttccattc gctttgtccg
    12481 tggcggataa ataccagttc catatcgtct ccaatgtgtg aaagtgggaa agccttattt
    12541 ataacatatt ttcacatttc ccgtatttga ttcagattca gacacgcgcc cactatggtt
    12601 tgccgttttg atttacaata atgccctttg ctttacattc cgcatacaca atgtttcaac
    12661 acacaggacg acacataaag caccgcccta tgtgttgccc tgatttggaa ggggttgccc
    12721 cctcccaaat aaagtctgat tctaccgccc cgaaggacag atgtccaagt ggcgggggtt
    12781 caaccgaaaa ggaaatacga taaatatgca accgcacgct ccacataccg attccaatac
    12841 gctgatgctc ggccgatacg ccgaacgcgc ctatctcgaa tacgccatga gcgtggtcaa
    12901 aggccgcgcg ctgcctgaag tttcagacgg ccaaaagccc gttcagcggc gcattttgtt
    12961 tgcgatgcgc gatatgggtt tgacggcggg ggcgaagccg gtgaaatcgg cacgcgtggt
    13021 cggtgagatt ttgggtaaat accatccgca cggcgacagt tccgcctatg aggcgatggt
    13081 gcggatggcg caggatttta ccttgcgcta tcccttaatc gacggcatcg gcaacttcgg
    13141 ttcgcgcgac ggcgacggtg cggcggcgat gcgttacacc gaagcgcggc tgacaccgat
    13201 tgcggaattg ctgttgtccg aaatcaatca ggggacggtg gatttcgtgc cgaactacga
    13261 cggcgcgttt gacgaaccgc tgcacctgcc cgcccgcctg cctatggtct tgctcaacgg
    13321 tgcgtcaggc attgcggtgg gtatggcgac cgaaatccca tcacacaatt tgaatgaagt
    13381 cacacaggcg gcgattgcac tgttgaagaa gccgacgctg gaaaccgccg acctgatgca
    13441 atacatccct gctcccgatt ttgccggagg cggtcaaatc atcacgccgg cggacgaatt
    13501 gcgccgtatt tacgaaaccg gcaagggcag cgtgcgcgtg cgtgcgcgtt acgaaatcga
    13561 gaagctggcg cgcggacaat ggcgcgtcat cgtaaccgag ctgccgccga acgccaattc
    13621 cgccaaaatc cttgctgaaa tcgaagaaca gaccaacccg aaaccgaaag caggcaaaaa
    13681 gcagctcaac caagaccagc tcaatactaa aaagctgatg ctggatttaa tcgaccgcgt
    13741 gcgcgacgag tcggacggcg aacatcccgt gcgccttgta tttgaaccaa aatccagccg
    13801 catcgatacc gataccttca tcaacacgct gatggcgcaa acttcgctgg aaggcaatgt
    13861 gtccatgaac ttggtgatga tggggctgga caaccgcccc gcgcagaaaa acctgaaaac
    13921 gattttgcag gaatggttgg atttccgcac cgttaccgta acacgccgtc tgaaattccg
    13981 tttgaaccaa gtggaaaaac ggctgcacat cctcgaaggc cgtctgaaag tctttctgca
    14041 catcgacgaa gtgattaaag tcatccgcga atcagatgac ccgaaagccg atttgatggc
    14101 ggcgttcggg ctgaccgaaa tccaagccga agacattttg gaaatccgcc tgcgccagtt
    14161 ggcacgtttg gaaggtttca aactcgaaaa agaattgaac gaattgcgcg aagaacaagg
    14221 ccgtctgaac atccttttgg gcgatgaaaa cgaaaagcgc aagctgatta tcaaagagat
    14281 gcaggcggat atgaaacaat acggcgatgc acgccgcacg ctggtggaag aggccggacg
    14341 cgccgtgctg acacaaacca ccgccgacga acccatcaca ctgattctgt cggaaaaagg
    14401 ctggatacgc agccgtgccg gacacaatct cgatttgagc caaaccgcgt tcaaagaagg
    14461 cgaccgcctc aaacaaaccc ttgaaggcag aacggtttta cccgtcgtca tcctcgattc
    14521 attgggcaga acctatacac tcgatgccgc cgaaattccc ggcggacgcg gcgacggcgt
    14581 gccggtttca tccttgatcg agttgcaaaa cggcgcgaaa cccgttgcga tgttgacagg
    14641 attgccggaa caacattatt tattatcaag cagcggcggc tacggcttca tcgccaagtt
    14701 ggctgatatg gtcggacgcg taaaagcggg caaagtggtg atgaccacag acagtggcga
    14761 aaccgtcctg ccgccgattg ccgtctatgc ctcctcgttc atcaaccccg actgcaaaat
    14821 cattgccgcc accagtcaaa accgcgccct cgccttcccc atcggcgaat tgaaaattat
    14881 ggcgaaaggc aaagggctgc aaatcatcgg attaaacgcc ggcgaatcgc tgacgcatac
    14941 cgccgtttct tccgagccgg aaatcctgat tgaaagcgaa ggcaggcgcg gcgcggcgca
    15001 caaagaccgc atccccgtct ccctgcttga ggcaaaacgc ggcaaaaaag gcaaactatt
    15061 acccatatcg ggcagcctga aacagctttc ttcccccaaa taaacccgat tccacacata
    15121 attatggtga tttccaaccc ccgcgaactt gaaaaactca aagaccggat tcccaatctg
    15181 atcaacatca tccgcgtcgc catcgttttt ccgctgatga ttatgcacat cctcgggctg
    15241 gaaaccggca gccgtgcgaa cctgcacgct tcgtggacgg cgtgggcgtt ttatgtttgg
    15301 ctcgccattg cctgctggct gattttcttt tccatcatcc atccgcattg gcaatggcag
    15361 gcgctgaaaa tgccgcgttt cagcgcggtg gcggacatca cgatgatcgg cgtgctgacc
    15421 tacctgttcg gcggcatcga ttccggcttc ggcatcctga ttctgccctt cgtcgtctgc
    15481 tcctgcctgc tcagctacgg gcgttacccc ctgctctatg ccagctacgc cgccatcctg
    15541 ctgatattca acgccattgc cgacggcgat atcggcaaat atccgcacat atcggatgcc
    15601 cgaaccgcct cggcaacctt catcctcgtc gccgcctcct atctttccgc catcttcacc
    15661 tcactgtcgg tcagatacat cgacagcgcc ggccaactgg cccgcgacaa ccacctcgcc
    15721 taccggcgca tcaaaggctt gagccaaacc gtactcgaac gcgttcaaga agccgtcgtc
    15781 gtcatcaata ccgaagggct ggcggtgctg ttcaaccgga aggcgaaaga ccttttcccc
    15841 gcactcgaaa tcggacggcg cgccgacctg tccgattctg ccgccgaact gtgggaccaa
    15901 gcctctccgc acactttcga atacgtcctc ggcacactcg gcctgaccgc ccgcatccgc
    15961 gccgtgccga tgaacaaaga gccggacaag ctgcttatcc tctacatccg cccgcaaagc
    16021 gaaattcagg cagaagccct gtccgtcaaa cttgccgcgc tcggacaact gaccgccaac
    16081 cttgcccacg aaatccgcaa cccgatgtcc gccatccgcc acgccaacga cctgctgcgc
    16141 gaaaatatgg aagcgggggc ggcagatccg ttcaacgcca aattgtgcaa aatcatcgac
    16201 ggcaacgtct gccgcatcga caaaatgctc gaagacattt cctcactcaa caagcgcaac
    16261 aaaaccgaac gcgaaaccat cggcctgata ccgttttggg aagaattcaa acaagagttc
    16321 ctgctcggcc atcccgatgc cgccggctgc atccgcttgg atatgcaggg caatcacccg
    16381 accgcctatt tcgatcccgc ccacctgcgg cagattatgt ggaatctcgc caacaacgcg
    16441 tggcggcaca gccgcaaaca gcccggctcg atttccgtca ccatccgccc cgcgcaaaaa
    16501 aacaccgtct gcatcctctt tgccgaccgc ccgaagtgca ggaacacctg ttcgaaccct
    16561 tttacaccac ggcggaaaac ggcaccggcc tcgggctgta tgtcgcccgc gaactggcgc
    16621 acgccaattt cggcgatttg acctacctac cggaagccaa atgtttcgaa ctcacattac
    16681 cggaaaaaac caatgactga actgcaacac cccgtcctcg tcgtcgatga cgaaaccgac
    16741 attctcgacc tgatggaaat gaccctgatg aaaatgggct tgcgcgtcca taccgcgtca
    16801 ggcgttgccg aagccaaaaa caagctcgac agccaacgct attcgctcgt cctgaccgat
    16861 atgcgtatgc cggacggctc ggggctggaa gtcgtccaac acatcaacag ccgcctgctc
    16921 gatacgccgg ttgccgtcat caccgccttc ggcaacgccg atcaggcaca ggaagcgttg
    16981 cgttgcggcg cgttcgaccc cgataccatg cagatacagg actatctcga ccaaatcgaa
    17041 cgcgacatta tcgaacaaac cctcaaacaa accgaaggca accgcacgca ggccgccaaa
    17101 cgcttgggca tcagcttccg ttccatgcgc taccgtatgg aacgcctcaa catcggctga
    17161 cgacaaaacg gcatccgcac catctccgcc cacccgaaaa aatgccgtct gaaacggcac
    17221 gggaaagcgg gttcgcccca cgcccgaacg gacacaaaac accatgaccg acatccttat
    17281 tgacaacacc gccaccgaaa ccgtccgcac cctgatacgg gcattccccc ttgtgcccgt
    17341 ttcccaaccg cccgaacaag gcagttacct ccttgccgaa cacgataccg tcagcctcag
    17401 gcttgtcggg gaaaaaagca gcgtcatcgt cgattttgcc tccggcgcgg cacaataccg
    17461 gcgcacaaaa ggcgggggcg aactcatcgc caaagccgtc aaccacaccg cgcaccccac
    17521 cgtttgggac gcaaccgcag gattggggcg cgacagcttc gtcctcgcct cgctcgggct
    17581 ggccgttacc gccttcgagc aacatcccgc cgtcgcctgc ctgctttcag acggcatccg
    17641 ccgcgccctc ctcaatcccg aaacgcaaga caccgccgcg cgcatcaccc tgcatttcgg
    17701 caacgccgca gtacaaatgc ccgcacttgt tcaaacacaa ggcaaacccg acatcgtcta
    17761 tctcgacccc atgtatcccg aacgccgcaa aagtgccgcc gtcaaaaaag aaatgaccta
    17821 cttccaccgg ctcgtcggtg aagcgcaaga tgaggccgcc ctcctccata ccgcacgcca
    17881 aacggcaaaa aaacgcgtcg tcgtcaaacg cccccgcctc ggcgaacacc ttgccggaca
    17941 agcccctgcc taccaataca ccggcaaaag cacccgcttc gacgtttacc tgccctacgg
    18001 gacggacaag ggataacgcc cataaaacaa gacaccgaaa aatttgccgt tcttatgcaa
    18061 acgagaaacc ggtttttgcg tttcgactgt tttggataaa tcatcacacc ttaaagtttg
    18121 tcattcccac ggaagtggga atccagaaat gaaaagcaac aggaatttat cgtaaatgac
    18181 cgaaaccgaa c
//
LOCUS       DAWEYF010000025        18113 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.025, whole genome shotgun sequence.
ACCESSION   DAWEYF010000025 DAWEYF010000000
VERSION     DAWEYF010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18113
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.025"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(84..1187)
                     /locus_tag="WGN93_000602"
     CDS             complement(84..1187)
                     /locus_tag="WGN93_000602"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ0226539.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(1422..2978)
                     /gene="dnaA"
                     /locus_tag="WGN93_000603"
     CDS             complement(1422..2978)
                     /gene="dnaA"
                     /locus_tag="WGN93_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ0226540.1"
                     /translation="MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPNEPRQAAGSASRPELEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VSASSRFMNRPVIDMDLARTALQDIIAEKHKVITADLIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            3271..3405
                     /gene="rpmH"
                     /locus_tag="WGN93_000604"
     CDS             3271..3405
                     /gene="rpmH"
                     /locus_tag="WGN93_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ0226541.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            3408..3773
                     /locus_tag="WGN93_000605"
     CDS             3408..3773
                     /locus_tag="WGN93_000605"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ0226542.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGH
                     PRIGLVIGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRPTAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            3838..4065
                     /gene="yidD"
                     /locus_tag="WGN93_000606"
     CDS             3838..4065
                     /gene="yidD"
                     /locus_tag="WGN93_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ0226543.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHGHDPVP"
     gene            4238..5875
                     /gene="yidC"
                     /locus_tag="WGN93_000607"
     CDS             4238..5875
                     /gene="yidC"
                     /locus_tag="WGN93_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ0226544.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQKQAATA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDETKPFVLFGDGKEYT
                     YVAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGDCRIDI
                     KRRNDNLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(5956..6669)
                     /locus_tag="WGN93_000608"
     CDS             complement(5956..6669)
                     /locus_tag="WGN93_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ0226545.1"
                     /translation="MVSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(6728..7318)
                     /gene="maf"
                     /locus_tag="WGN93_000609"
     CDS             complement(6728..7318)
                     /gene="maf"
                     /locus_tag="WGN93_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ0226546.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPEALIVGADQVAWCDGRQWGKPMNLANAHKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEAL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            7466..7969
                     /locus_tag="WGN93_000610"
     CDS             7466..7969
                     /locus_tag="WGN93_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ0226547.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSLHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGMLLEKELDLRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSS"
     gene            8003..8182
                     /gene="rpmF"
                     /locus_tag="WGN93_000611"
     CDS             8003..8182
                     /gene="rpmF"
                     /locus_tag="WGN93_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ0226548.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            8357..8884
                     /locus_tag="WGN93_000612"
     CDS             8357..8884
                     /locus_tag="WGN93_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ0226549.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            8972..10027
                     /gene="plsX"
                     /locus_tag="WGN93_000613"
     CDS             8972..10027
                     /gene="plsX"
                     /locus_tag="WGN93_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ0226550.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTAQIVGMDEAPQSALKNKKDSSMRVAVNQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            10163..10421
                     /locus_tag="WGN93_000614"
                     /pseudo
     CDS             10163..10421
                     /locus_tag="WGN93_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
     gene            10448..10864
                     /locus_tag="WGN93_000615"
     CDS             10448..10864
                     /locus_tag="WGN93_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226551.1"
                     /translation="MKTSTVVFGGFFITDNGERIQIPVLENPGIKEINHFFSISNFEK
                     KAGVLVFRIIPEPEFGDTELTVYFEKGYYLPMIQTILEDGDIEVKNLKTENYSGKARE
                     ILGDSYPIEHTSKNISTIQNIISEFMIQKQTPAPII"
     gene            10884..11087
                     /locus_tag="WGN93_000616"
     CDS             10884..11087
                     /locus_tag="WGN93_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226552.1"
                     /translation="MPSEAAWAFRRHFLRLKQHIGNPAPPVHGNLHLKTICIPNHTPI
                     PISVICTLPVLGNHRFFAYNSRI"
     gene            11114..12076
                     /locus_tag="WGN93_000617"
     CDS             11114..12076
                     /locus_tag="WGN93_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ0226553.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            12123..12494
                     /locus_tag="WGN93_000618"
     CDS             12123..12494
                     /locus_tag="WGN93_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ0226554.1"
                     /translation="MKRQAFFKPIACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            12520..13446
                     /gene="fabD"
                     /locus_tag="WGN93_000619"
     CDS             12520..13446
                     /gene="fabD"
                     /locus_tag="WGN93_000619"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ0226555.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFANAVKLVRLRAELMQSAVPQGVGAMAAILGLEDGQVKAICAESAQGEVVEAVNFN
                     SPGQIVIAGNAAAVGRAMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQIAAFIEAH"
     gene            13585..15450
                     /gene="msbA"
                     /locus_tag="WGN93_000620"
     CDS             13585..15450
                     /gene="msbA"
                     /locus_tag="WGN93_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ0226556.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            15550..17115
                     /gene="guaA"
                     /locus_tag="WGN93_000621"
     CDS             15550..17115
                     /gene="guaA"
                     /locus_tag="WGN93_000621"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ0226557.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRDIFDDAPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAKEKKLTNAKWLAQGTIYPDVIES
                     AGAKTQKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            17177..17923
                     /gene="fabG"
                     /locus_tag="WGN93_000622"
     CDS             17177..17923
                     /gene="fabG"
                     /locus_tag="WGN93_000622"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ0226558.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQAFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         4541 a         5496 c         4339 g         3737 t
ORIGIN      
        1 ttccgacagc cgaacaaaac cccgaatccg tctgcacggt tcggggtata tctccaatac
       61 gggcatcgtg ttccggaaaa ccgtcaaatc cgcatcggca tcacaatata tttgaaattc
      121 ggattgttcg gcacggtaaa cagcgtcgag cggttggcat cgccgaaggc aagctgcata
      181 tcgtcggaat ggatgttgcg caacacgtcc atcagatagc cgatattgaa accgacttcg
      241 agttcgccgc cctgataggc gatttcgatt tcttcgcgcg cttcttcctg ctcgttgttg
      301 ctgcacacaa cgctcaacag gccgggttgc aggaacaggc gcgcgccacg gaatttttcg
      361 ttggcaagaa tggacacgcg ttccagcgca cccaaaagtt cggcacggga caaaacgaaa
      421 atcttgtcgt tgtccaaagg aatcacgcgg ttgaaatcgg ggaatttgcc gtcgatgacc
      481 ttgctgacga tggtcgtgcc gttgcattgg aaacgcacct gtttgtccag cagctcgatt
      541 tgaatcggat cgtcggggtt gttcaacagt ttgaacagtt ccagcaccgt tttgcgcggc
      601 aaaatcactt cggcgcgcgg caaatccgca tcaatcgcgc aggctgcata ggcaaggcgg
      661 tgtccgtcgg tcgccacaag gcgcaactgg ctgccctcaa cctgcatcag cagaccgttg
      721 agataatagc ggatgtcctg caccgccatg ctgtactgca cttgcgacag catggttttg
      781 aaacgctcct gctccagcga gaaagtcgcg ctgatgtcct cgccgacatt catcatcgga
      841 aaatcggcgg caggcagggt ctgcagggca aaacgcgatt tgcccgcctt cagcgtcaga
      901 cggctgtcgt cccaatccag cgacaccagc gcaccggcag gcagtgcccg taaaatgtcc
      961 tgaaatttct tggcattggt ggtgatgcgg aagtcgtccg cgccgccctc gggacccgca
     1021 gtgtcgattt ggatttccaa atcggttgcc aagagtttgg tctgaccgcc ttttccctca
     1081 atcaggacgt tggacaggat gggcagggtg tggcggcgtt cgacgatgcc ggtaacggct
     1141 tgcagcggct tgagtaggct gtcgcgttcg gcttgtaaaa tcaacatttt cgctcctttg
     1201 aatcggtttg tatagtggat taaatttaaa tcaggacaag gcgacgaagc cgcagacagt
     1261 acaaatagta cgaaaccgat tcacttggta cttcagcacc ttagagaatc gttctctgtg
     1321 agctaaggcg aggcaacgct gtactggttt aaatttaatc cgctatatct ttacccttcg
     1381 gacggcatgg gcaatatcat gtcgtctgaa aacgttttcc atcagttttg aatcagaatc
     1441 agcagtttct cgtaatcctg cgccaactcg gggtcttcct cgcgcagttt cgccaccgcc
     1501 ctgatgccgt gcatgacggt cgtatggtcg cgtccgccga acgaatcgcc gatagacggc
     1561 aggctcaaag tggtcagttc tttggtcagg ctcatggcaa cctgacgcgg acgggcaatg
     1621 ttgcgcgtgc gttttttgcc gagtacgtcg ctgattttga tgcggtaata tttcgccacc
     1681 gcatcaatga tgaggtcggc ggtaatgact ttgtgcttct cggcgataat gtcctgcaac
     1741 gccgtacgcg ccaaatccat atcgatgacg gggcggttca taaagcggct gctcgcgctg
     1801 acgcggttga atgcgccttc aagctcgcgc acattggaac ggatcaggtt ggcaataaac
     1861 aatgccgcct cgtcttcgat gctgataccc gccgcctctg cctttttctg caaaatggcg
     1921 atgcgcattt ccaattcggg cggctcgagt tccaaagtca aaccccaaga gaaacgcgat
     1981 ttgagccggt cgtccatgcc ttcgattttg gcgggtaaaa catcgcaagt gaggatgagc
     2041 tgttttttct cgttgtggaa atggttgtac agatagaaaa actcttccat cgtacggtct
     2101 ttgcctttga tgaactggat atcgtcgata atcagcaggt cgtattgctt gtattgctgc
     2161 ttgaacacgt cgtaggtatt gttgcgaacc gccttcataa agctgcggat gtagtcgtcc
     2221 gaatgcatat agcgcacttt cgcatcggga cggtttttca aaagctcgtt gccgaccgcc
     2281 tgcacaaggt gggttttgcc caaacccgtg ctgccataga ggaagaacgg gttataactc
     2341 tgtcccggac tttccgctat cgcctgcgcg gcggcagctg caaggcggtt gcccttacct
     2401 tcgaccaacg tatcaaacgt gtaatccgga gacaggttgg tttgttcgta acgcgcctct
     2461 tccgcatcac gctgcgcatc cgtccgcgct ttcgcaagca cctccaattc cggacgggaa
     2521 gcagacccgg cagcctgacg cggctcgttc ggcaggtttt tcatacgttc cgccaaaata
     2581 tccgccgccg ttttcgacgc agcgggtttg acaggctctt cagacggcag ctcgtccaac
     2641 agaacctcct gcacaggcat ctcctccgac cccgcgtgca aggacggctc ggcaggttcg
     2701 acagcacctt caaccgccgc catctcataa cgcacgcctt ctcccggttt gaatacgaag
     2761 gcggaacggc cggcagccaa ctcttccctc accgcttcta tttttccggc aaactggctc
     2821 ttgagcatat tgcaggcaaa ctggttcttg ccgtacacca cccatacgcc accctcctca
     2881 ccgacggtaa ggggcgcaat ccattgcgca aactgcccgt gaggcaacat atcgtgaaga
     2941 cggcggaggc acagcggcca aaactctgct aatgtcatgg ataggctcga atcggtaaaa
     3001 atgaaatcga aaacaaagaa aatataatat tttcaaaaag aaaacaaatc tgttgaacac
     3061 acatcggttc aaaatgcagc gaaccgatta taccgactcg ccgatatttt atccacaacc
     3121 cgtgcaaaaa tttatccaca gaaaggcggc agaaatccgc aggcaatcgg gcaatcctcc
     3181 tgcaaagttt ctatattgat tgacaaaagc ggcaaattgg agtgtaattc acggtttaat
     3241 tatctaccca ttctattttt aggaaacatc atgaaacgca cttatcaacc ttccgttacc
     3301 aaacgcaaac gcacccacgg cttcctggtg cgctccaaaa cacgcggcgg ccgcgcagta
     3361 ctggcagcac gccgtgccaa aggccgcaaa cgcctggcag tgtaattttg gactaccgct
     3421 tcggaaggca gtaccgcttg ttaaaaacgg atgatttttc atccgttttt gcattcagaa
     3481 accgccgcag ccgcgacctg ctgcaagttt cgcgctcaaa cggcaacggg ctgggccatc
     3541 cccgcatcgg tctggtgatc ggcaaaaaaa ccgccaaacg cgccaacgaa cgaaattata
     3601 tgaagcgcgt catccgcgac tggttcagat tgaacaaaaa ccggctgccg ccgcaggatt
     3661 tcgtcgtgcg cgtccaccgt aaattcgaca ggcctaccgc aaaacaggca agggcggaac
     3721 tggcacaact catgttcggc aaccccgcaa ccggatgcag gaaacaggca tgatcagaac
     3781 ggtactctgc aggcaaggtt cagacggcaa cgggtttccc atacaaggaa catcccgatg
     3841 aacttcctat tgtccaaact cctgctggga ctgatacggt tctaccaata ttgcatcagc
     3901 ccgctgattc cgccgcgctg ccgttatacg ccgacctgtt cgcaatacgc ggtcgaagcg
     3961 gtcaaaaaat acggcgcatt caaaggcggt cggctcgcca tcaagcgcat tgcacgctgc
     4021 caccctttcg gcggacacgg acacggacac gaccccgttc cctgacccga cgcaatattc
     4081 aaattgcacg ctttcctttt atttcccatc ggtttctata taatgccgtc tgaaccttcg
     4141 ggctggcggc acgaccgtcg ggtatgaagc ccgcccttat tccccgtcta tcggaacacg
     4201 caacctgcgg catttccgac cattcaggaa actctatatg gattttaaaa gactcacggc
     4261 gtttttcgcc atcgcgctgg tgattatgat cggctgggaa aaaatgttcc ccaccccgaa
     4321 acccgtcccc gcaccccaac agacggcaca aaaacaggca gcaaccgctt ccgccgaagc
     4381 cgcgctcgcg cccgcaacgc cgattaccgt aacgaccgac acggttcaag ccgtcattga
     4441 tgaaaaaagc ggcgacctgc gccggctgac cctgctcaaa tacaaagcaa ccggcgacga
     4501 aaccaaaccg ttcgtcctgt ttggcgacgg caaagaatac acctacgtcg cccaatccga
     4561 acttttggac gcgcaaggca acaacgttct gaaaggcatc ggctttaccg caccgcaaaa
     4621 acaatacagc ctcaacggcg acaaagtcga agtccgcctg agcgcgcccg aaaccaacgg
     4681 actgaaaatc gacaaagtct ataccttcac caaaggcagc tatctggtca acgtccgctt
     4741 cgacatcgcc aacggcagcg gtcaaaccgc caacctgagc gcggactacc gcatcgtccg
     4801 cgaccacagc gaacccgagg gtcaaggcta ctttacccac tcttacgtcg gccctgttgt
     4861 ttatacccct gaaggcaact tccaaaaagt cagcttctcc gacttggacg acgatgccaa
     4921 atccggcaaa tccgaggccg aatacatccg caaaaccccg accggctggc tcggcatgat
     4981 tgaacaccac tttatgtccg cttggatttt gcagcctaaa ggcggacaaa gcgtttgcgc
     5041 cgctggcgac tgccgtattg acatcaaacg ccgcaacgac aacctgtaca gcaccagcgt
     5101 cagcgtgcct ttagccgcta tccaaaacgg cgcgaaatcc gaagcctcca tcaacctcta
     5161 cgccggcccg cagaccacat ccgtcatcgc aaacatcgcc gacaacctgc aactggcaaa
     5221 agactacggc aaagtacact ggttcgcttc cccactcttc tggctcctga accaactgca
     5281 caacatcatc ggcaactggg gctgggcaat cgtcgttttg accatcatcg tcaaagccgt
     5341 actgtatcca ttgaccaacg cctcttaccg ctctatggca aaaatgcgtg ccgccgcacc
     5401 caaactgcaa gccatcaaag agaaatacgg cgacgaccgt atggcgcaac aacaggcgat
     5461 gatgcagctt tacacagacg agaaaatcaa cccgctgggc ggctgcctgc ctatgctgtt
     5521 gcaaatcccc gtcttcatcg gattgtattg ggcattgttc gcctccgtag aattgcgcca
     5581 ggcaccttgg ctgggttgga ttaccgacct cagccgcgcc gacccctact acatcctgcc
     5641 catcattatg gcggcaacga tgttcgccca aacttatctg aacccgccgc cgaccgaccc
     5701 gatgcaggcg aaaatgatga aaatcatgcc gttggttttc tccgtcatgt tcttcttctt
     5761 ccctgccggt ctggtattgt actgggtagt caacaacctc ctgaccatcg cccagcaatg
     5821 gcacatcaac cgcagcatcg aaaaacaacg cgcccaaggc gaagtcgttt cctaaatgcc
     5881 gcagcatgaa aaatgccgtc tgaaacctgt tcagacggca tttttattgc tcacccccta
     5941 tcggggcgga aatcttcaac ctgcatacat cacaaaaatc gtcgggcgtt ttttcagatt
     6001 gggcatttct tttctttttc gccactgcac aaccgtctgg ctgatgattt cctgagtcgg
     6061 caacgtcaaa tccgtagccg tgcacaagcg cgtttcagga tgcaggtttt ccaccgcatc
     6121 cgccaacaac acatcgttgc gatacggcgt ttcgataaac agctgcgttt cattctgctg
     6181 gcgcgaacgt tgctccaaag ccttcaaact ctgaatccgc tcgttttttt cagacggcag
     6241 ataaccctta aacgcaaaac tctgcccgtt cgcacccgaa gccatcaaag ccagcagcag
     6301 gctggaaggc ccaaccagcg gacgcacttc aaaaccgtgt ttatgcgcca aagccaccag
     6361 attcgcaccc ggatcggcaa cagccgggca acccgcctcg ctgacaatgc ccatactgcg
     6421 cccttcttgc aaaggtttca gcaattccgg caaagtcttc aaatccgtgt gttcgttcag
     6481 cgtttgcaaa ttcagttcgc ggataggcat tgtcacgccc aaatgtttca aatgcgcgcg
     6541 cgccgttttt tccgcttcca cgacaaaatc cgtcagcccg acaatcgcct gttgttcatg
     6601 cggcaacagg cacggcgtgt caggcgtacc caaaggcgta ggaatcaaat acaaaacagg
     6661 agacaccatt ccctcactca tcggttaaaa atgccgtctg aacccttcag acggcataaa
     6721 cgggcagtta cagaacctcc acgccctcat ttttcaaaaa atcaaccaga cggaaaaccg
     6781 gcaaaccgat taaagcattc ggatcggtac tctcaatcct ttcgatcaac aatgcaccca
     6841 aagcctcgct cttcaacgca cacgagcaat aaaccgcatc aggctcgcgc tccaaatagc
     6901 ggaggatgtg tagctcgtcc aacttcctca tcacgaccac cgtcttatcg atatgccgct
     6961 gcatcctgcc cgtaaccgta tttagcagaa cgaccgcgct gtaaaactca atctccctgc
     7021 cgctcaaatg catcaacatc ttgtgcgcat tagcaaggtt catcggcttg ccccactgcc
     7081 tgccgtcgca ccacgccacc tggtccgcac cgacaatcaa cgcctctggg aaacgcccgg
     7141 ccaacgaccg cgccttaccc tcggcaaggc gcaatgccgt ctgaggggcg gattccccca
     7201 acatcggcgt ttcgtcaaaa tcgggggacg ccgcctgaaa ggcaatgccg agcctttcca
     7261 tctgttcgcg gcggaaaacc gaactcgtac ccaaaatcaa aggcagttcc aaacccatcc
     7321 catcctcctt accgttgaaa acacgcccga aggggcggta aaatccagcc atgcgccgaa
     7381 acacggatac acgccttcgg cgtaccgcaa catttttctt aaaaatattg acgttagaac
     7441 atctaaatta tatcatatct cgtttatgtc agaccctaat ttgattgacc cggaaatttt
     7501 cgccgccgaa gggcagaacc tgcaaggcag ttttctgctg gaagaattgg acgagcgagt
     7561 cagtttgcac gattatcccg ccgacaggca gaccaaaata tcgtttacac tgaccggcgg
     7621 tcgcgaccgg ctgcaacgcc tgttcctcga cctgaacgtc aaagccgata tgcccctgat
     7681 ttgccagaga tgtatcaaac ccatgccgtt catgcttgat gaaagcagcc gtatcgtcct
     7741 gttttccaac gaagagtcct tggacgaatc catgcttgcc gatgaagaat tggaaggtat
     7801 gctgctcgaa aaagagcttg acttgcggac cttggtcgaa gaccaaatcc tgatgtcgct
     7861 ccctttctcc ccccggcacg aagactgcgg cgacaatggg acactggaag aagtcaatcg
     7921 ggacaaacca aacccctttg ctgttttggc aggtttgaaa agcagttaat taggacacag
     7981 tttatttatc taggagcttg aaatggccgt tcaacaaaac aaaaaatccc cttccaaacg
     8041 cggtatgcac cgttcgcacg acgcgctgac cgcgcctgca ctgtctgtcg acagcacaac
     8101 cggcgaagta caccgcccgc accacatctc ccccaacggt atgtaccgcg gccgcaaagt
     8161 ggtcaaagcc aaaggcgaat aatccctatt cgactgactg aaaaagccag aacattgcca
     8221 tgcaattact ggcttttttt gcattggacg caccatccgt ccaaactttc gccatacgtc
     8281 aacacacagg ggcaaagcgt tccgtataat accccgtgaa aatattccaa aagccccaac
     8341 caccaaggaa attccgatga aacagaaaat ctggtacacc tacgatgaca tccaccgcgt
     8401 catcaaagca ttggcagaaa aaatccggaa cgccgacatc aaatacgatg ccatgattgc
     8461 catcggcggc ggcggcttta ttccggcacg tatgctgcgc tgttttctgg aaattccgat
     8521 ttatgccgta accaccgcct attacgacag cgacaacgaa ggacaggtta cagaagaagt
     8581 caaaaaagtc caatggctcg accccgttcc cgaagccctg cggggcaaaa acgtccttgt
     8641 tgtcgatgaa gtggacgaca gccgcgtaac catggaattt tgcctgacag agctgcttaa
     8701 agaagacttc ggcaccatcg gcgtcgccgt actgcacgaa aaaatcaaag ccaaagcagg
     8761 caaaatcccc gaaggcattc cctatttcag cggcatcacc gtagaagact ggtggatcaa
     8821 ctatccatgg gacgcactcg acatcgacga acacaaccgc cttgccgagg ccggccgagg
     8881 ctgacccttt cagacggcat attttccgaa ccgatgccgt ctgaagcccg cacgacccct
     8941 gccgcagacc gaaaacctac cggagaaccc tatgattaca cttgccgtag atgccatggg
     9001 cggcgaccaa ggacttgccg ttaccgtacc cggcgcaacc gcattcctcc aagcacaccc
     9061 cgatgtccgc ctgattatga ccggcgacga aacgcaactg cgccaagccc tgaccgcggc
     9121 aggcgcaccg atggaacgca tcgacatctg ccacaccgca caaatcgtcg gcatggacga
     9181 agcgccgcaa tccgccctga aaaacaaaaa agactcctcc atgcgcgttg ccgtcaacca
     9241 agttaaagaa ggcaaagccc aagccgccgt atccgcaggc aacacgggtg cgctcatggc
     9301 aaccgcacgt ttcgtcctca aaaccattcc cggcatcgaa cgccccgcca tcgccaaatt
     9361 ccttccttcc gacaccgacc atgttaccct tgcactcgac cttggcgcga acgtcgactg
     9421 cacgcccgaa cagctcgccc aatttgccgt tatcggcagc gaactcgtcc acgcactcca
     9481 tcctcaaaaa ggacagccgc gcgtcgggct ggtcaacgtc ggcacggaag acatcaaagg
     9541 tacggacacc gtcaaacaaa cctacaaact gctgcaaaac agcaaactca actttatcgg
     9601 caacatcgaa agcaacggca tcctctacgg cgaagcagat gtcgtcgtcg ccgacggctt
     9661 tgtcggcaac gtcatgctca aaaccatcga aggcgcggtc aaattcatga gcggagccat
     9721 ccgccgcgaa ttccaaagca acctgttcaa caaacttgcc gccgttgccg ccctacccgc
     9781 cctcaaaggg ctgaaaaaca aactcgatcc gcgcaaattc aacggggcca tcctgctcgg
     9841 gctgcgcggc atcgtgatta aaagccacgg cggcacagac gaaaccggtt tccgctacgc
     9901 actcgaagaa gcctaccacg aagccaagtc agccggcctt tccaaaatcg aacagggcgt
     9961 agccgaacaa ctcgccgcac tcgaaactgc caaagccgtc caaaacgaaa atgtcggcgg
    10021 tctgtaacac gcgcgatgcc gtccgaacgc ccccgcccct ttcagacggc atccgcccgc
    10081 cccgaacctg cgggcgcgga cggcgatgca cctgtccggc acttcccaaa tacttccctg
    10141 taaaataagg agtatttgaa aaatgaagac attagaaaaa cggatgaggg cattagacaa
    10201 acggataatg aagttcggaa aatcccttga aggcaggctt gaggcttgat gcccgtctga
    10261 ttgaatccgc attggattat attcattatt cggaacgttt tttggctttt gaaatcctgt
    10321 gtacttatat cgaagatttc gatgtccggc tgacggaaca agaatcccgg gaaatttctt
    10381 ttatcaacaa ggaatttgag atagaaagca cgtccgatta accaataaag ccaatgggtt
    10441 gataaacatg aaaacatcaa cggttgtttt tggcggattt tttattacag ataatggaga
    10501 acgaatccaa atccccgttt tggaaaatcc tggcattaaa gaaatcaatc actttttttc
    10561 catatcaaat tttgagaaaa aagccggcgt ccttgttttc agaatcatcc ccgagccgga
    10621 atttggcgat accgaattaa ctgtctattt tgaaaaagga tattatttgc caatgattca
    10681 aacaatttta gaagacgggg atattgaagt caaaaacctt aaaacggaaa attacagtgg
    10741 gaaggcaagg gaaattttgg gagattccta ccctattgag catacctcta aaaatatttc
    10801 tacaattcaa aatataattt ctgaatttat gatacaaaaa caaacaccgg caccaataat
    10861 ttgatggaaa cccaacaatc aaaatgccgt ctgaagcagc ttgggctttc agacggcatt
    10921 tcctccgctt aaaacagcat atcggcaacc ccgccccgcc cgtccacggc aatctgcatc
    10981 tgaaaaccat ctgtatccca aaccacaccc ccatcccgat ttccgtcatt tgcaccctgc
    11041 ccgtattggg caatcatcgg tttttcgctt acaatagccg aatctgaacc aactatccaa
    11101 aaaggccgtt cccatgcagt atgccaaaat ttccggcacg ggcagctatc ttcccgccaa
    11161 ccgcgtcagc aatgacgacc ttgcccaaaa agtggatacc tcggacgagt ggattaccgc
    11221 gcgcacgggc atcaaattcc gccatattgc agccgaaaat gagaaaacca gcgatcttgc
    11281 cgccgaagca gcccgccgcg cactggatgc agccggatta gacagcggcg aaatcgattt
    11341 aattattgtg gcgacggcaa cgccggatat gcagtttcct tctaccgcca ccatcgtcca
    11401 acaaaaactg ggcatcacca acggctgccc cgcgtttgac gtacaggcgg tgtgtgcggg
    11461 ctttatgtac gcgctgacca cggcaaacgc ctacatcaaa agcggcatgg caaaaaacgc
    11521 gctggtcatc ggcgcggaaa ctttcagccg catcgtcgat tggaacgacc gcacaacctg
    11581 cgtattgttc ggcgacggcg cgggcgcggt ggttttgagc gcggcggaca aaccgggcat
    11641 catccacagc aaactcaaag ccgacggcaa ttatctgaaa ctcttaaacg tccccgggca
    11701 aatcgcctgc ggcaaagttt ccggttcgcc gtacatttcg atggacggtc ccggcgtgtt
    11761 caagtttgcc gtcaaaatgc tgtccaaaat cgccgatgac gttatcgaag aagccggtta
    11821 taccgccgct caaatcgact ggatcgtgcc gcatcaggca aaccgccgca ttatcgaatc
    11881 gaccgcgaaa catttaggtt tgagtatgga caaagtcgtc ctgaccgtcc aagaccacgg
    11941 caacacatcc gccgcatcga ttccgctggc tttggatacg ggcatccgca gcggacaaat
    12001 caaacgcggt caaaacctgc tgctcgaagg catcggcggc ggtttcgcgt ggggcgcggt
    12061 gctgttgcaa tattgaaccc gatgccgtct gaaacaggct ttcagacggc atttcccata
    12121 tcatgaagcg gcaggctttc ttcaaaccaa ttgcgtgtgc ggcatttctg tctgccgttt
    12181 cgctgcgcct ccccgtattg ggcgcgtgtt acgcaatatt gtccctctat gcgtttgcac
    12241 tttacggcat cgacaaacgg cgtgccgtgc ggggaaaacg ccgcattccc gaacaccgcc
    12301 tgctgctgcc tgccttgttc ggcggttggg cgggcgcata cttgggcagc aggatattca
    12361 ggcataaaac ggcgaaaaag cgttttgttg tgctgttccg tctgactgtt tcgggcaatg
    12421 tcctggcgac ctgcatcctg attgattatt tcgttccgcc cgaacttttt gtcaaactcg
    12481 ggcaacatct ctgacaatcc aaccaaacaa aggaatacca tgtcttttgc attcttcttt
    12541 cccggacaag gttctcaaag cctcggcatg atgaacggct ttacagggca ggccgtcgtc
    12601 aaaaacacat ttgacgaagc ctccgccata ttggggcagg acttgtgggc gatgattaac
    12661 ggcagcgatg ccgaaatcat cggtcaaacc gtcaataccc aacccatcat gctcgccgcc
    12721 ggcgttgccg tttaccgcgc ctatttggaa gcgggtggca aaacgcctgc cgccgttgcc
    12781 ggacacagcc tcggcgaata taccgcgctt gtcgccgccg gcgcattgga ttttgccaac
    12841 gcggtcaaac tcgtgcgcct acgcgcagaa ctgatgcagt ccgccgtacc gcaaggcgtg
    12901 ggcgcaatgg cggcgattct cggcttggaa gatgggcagg ttaaagccat ttgtgccgaa
    12961 tccgcacagg gcgaagtggt cgaagccgtc aacttcaact cgcccgggca aatcgtgatt
    13021 gcaggcaacg ccgccgccgt cggacgcgcc atggctgccg ccaaagaagc cggagccaaa
    13081 cgcgccctgc cgctgcccgt gtccgtacct tcccattgca gcctcatgaa acccgccgcc
    13141 gacaaacttg ccgaagcctt gaaaaccgtt gaaatcaagc agccgcaaat ccgcgttatc
    13201 cacaacgccg acgttgccgc ctacgatgat gccgacaaaa tcaaagacgc gctcgtccgc
    13261 cagctttaca gccccgtacg ctggacggaa accgtcaacg ccctcgtttc agacggcatt
    13321 gccgaatccg ccgaatgcgg cccgggcaaa gttctggcag gtctggcaaa acgcatcaac
    13381 aaagccgccg cgtgcagcgc actgaccgat gccggacaga ttgccgcctt tatagaagca
    13441 cactgacttc gttctgtaaa aagcagcctg catgcctcag gctgcttttc acgtccgaac
    13501 ggcaaacagc cgcatatttg cgctataatt gatgacgacc aaaccaccga cagcggctgc
    13561 cgttgcagtt cccgccccac cgacatgata gaaaaactga ctttcggact gtttaaaaaa
    13621 gaagacgcgc gcagctttat gcgcctgatg gcgtacgtcc gcccctacaa aatccgcatc
    13681 gttgccgccc tgattgccat tttcggcgtt gccgccaccg aaagctacct tgccgccttc
    13741 atcgcccccc tgattaacca cggcttttcc gcacctgccg cgccgcccga gctgtctgcc
    13801 gccgccggca tcatttccac cctgcaaaac tggcgcgaac agtttaccta tatggtttgg
    13861 gggacggaaa acaaaatctg gaccgtcccg ctctttctca tcattctcgt cgtcatccgt
    13921 ggcatctgcc gctttaccag cacctatctg atgacttggg tctccgtgat gaccatcagc
    13981 aaaatccgca aagatatgtt tgccaaaatg ctgacccttt cctcccgcta ccatcaggaa
    14041 acgccgtccg gcaccgtact gatgaatatg ctcaacctga ccgaacagtc ggtcagtaac
    14101 gccagcgaca tcttcaccgt cctcacgcgc gacacgatga tcgttaccgg cctgaccatc
    14161 gtcctgcttt acctcaactg gcagctcagc ctcatcgttg tcctgatgtt ccccctgctc
    14221 tccctgctct cgcgctacta ccgcgaccgt ctgaagcacg tcatttccga ctcgcaaaaa
    14281 agcataggca cgatgaacaa cgtgattgcc gaaacccatc agggacaccg cgtcgtcaag
    14341 ctgttcaacg ggcaggcgca ggcggcaaac cggtttgacg cggtcaaccg caccatcgtc
    14401 cgcctcagca aaaaaatcac gcaggcaacg gcggcacatt ccccgttcag cgaactgatt
    14461 gcctcgattg ccctcgccgt tgtcatcttc atcgccctgt ggcaaagcca aaacggctac
    14521 accaccatcg gcgaatttat ggcattcatc gtcgcgatgc tgcaaatgta cgcacccatc
    14581 aaaagccttg ccaacatcag catccctatg cagacgatgt tcctcgccgc cgacggcgta
    14641 tgtgcatttc tcgacacccc gcccgaacag gacaaaggca cgctcgcgcc gcagcgtgtc
    14701 gaagggcgta tcagcttccg caacgtcgat gtcgaatacc gttcggacgg catcaaagcc
    14761 ctcgacaact tcaacctcga catcagacaa ggcgaacgcg tcgccctggt cggacgttcc
    14821 ggcagcggca aatccaccgt cgtcaacctg ctgccccgct ttgtcgaacc gtctgccggc
    14881 aacatctgca tagacggtat cgacatcgcc gacatcaaac tcgactgcct gcgcgcccaa
    14941 ttcgccctcg tctcccaaga cgtattcctg tttgacgaca ccctgtttga aaacgtccga
    15001 tacagccgtc ccgacgcagg cgaagccgaa gtcctgtccg ccctccaagc cgccaacctg
    15061 caaagcctga ttgacagctc cccgctcgga ctgcaccagc ccatcggatc gaacggcagc
    15121 aacttgtccg gcggacagcg gcaacgcgtc gccatcgccc gcgccatttt gaaagacgcg
    15181 ccgatattat tattggacga agccaccagc gcattagaca acgaatccga acgcctcgtc
    15241 caacaagcgc tcgaacgcct gatggaaaac cgcaccggca tcatcgtcgc ccaccgcctg
    15301 accaccatcg aaggggccga ccgcatcatc gtaatggacg acggcaaaat catcgaacaa
    15361 ggcacacacg aacaactgat gtcccaaaac ggctactaca cgatgttacg caatatctca
    15421 aacaaagatg ccgccgtccg gacggcataa acaaaatgcc gtccgaaatg gtataatcgc
    15481 cccgaccctt tcagacggca ctatatccgc cgacccatcc gattatcttc aatcactgta
    15541 aaacccatta tgacccaaga caaaatcctc atcctcgact tcggttcgca agttacccag
    15601 ctgattgccc gccgcgtgcg cgaagcccac gtttactgcg aactgcattc cttcgatatg
    15661 cctttggacg aaatcaaagc cttcaacccc aaaggcatca tcctttccgg cggccctaat
    15721 tccgtttacg aatccgacta tcaggccgat accggtattt ttgatttggg cattccggtt
    15781 ttgggcatct gctacggaat gcagtttatg gcgcaccact tgggcggcga agtgcagccc
    15841 ggcaaccagc gcgaattcgg ttacgcgcaa gtcaaaacca tcgacagcga actgacccgc
    15901 gatattttcg acgacgcgcc caacacactc gacgtatgga tgagccacgg cgacaaagtg
    15961 tccaaactgc ccgacggctt cgccgtcatc ggcaacaccc cgtcctgccc gattgccatg
    16021 atggaaaacg ccgaaaaaca attctacggc atccagttcc accccgaagt tacccacacc
    16081 aaacaaggcc gcgccctgtt gaaccgcttt gtcttggata tttgcggcgc gcaaccgggc
    16141 tggacgatgc cgaactacat cgaagaagcc gttgccaaaa tccgcgaaca ggtcggcagc
    16201 gacgaagtga ttttaggttt gtcaggcggc gtagactctt ccgtagccgc cgcgctgatt
    16261 caccgcgcca tcggcgacca actgacctgc gtgttcgtcg atcacggttt gttgcgcctg
    16321 aacgaaggca aaatggtgat ggatatgttc gcccgcaact tgggtgtgaa agtgattcac
    16381 gtcgatgccg aagggcagtt tatggcgaaa ctcgccggcg ttaccgaccc tgagaaaaaa
    16441 cgcaaaatca tcggcgcgga atttatcgaa gtatttgatg ccaaagagaa aaaactcacc
    16501 aacgccaaat ggctggcgca aggcacgatt taccccgacg taatcgaatc cgcaggcgcg
    16561 aaaacccaaa aagcccacgc catcaaatcg caccacaacg tcggcggtct gcccgaaaat
    16621 atgaagctca agctgcttga gccgttgcgc gacttgttta aagacgaagt gcgcgaactg
    16681 ggcgttgctt tgggtctgcc gcgcgaaatg gtgtaccgcc atccgttccc cggccccggt
    16741 ttgggcgtgc gcatcttggg cgaagtgaaa aaagaatacg ccgacttatt gcgtcaagca
    16801 gacgatattt tcatccaaga attacgcaac accaccgacg aaaacggcac atcttggtac
    16861 gacctgacca gccaggcatt tgccgtattc ctgcctgtga aatccgtcgg cgtaatgggc
    16921 gacggacgca cttacgacta cgtcgtcgca ctgcgcgcag tcatcaccag cgacttcatg
    16981 accgcacact gggcagaact gccttactca ctgctcggac gcgtgtccaa ccgcatcatc
    17041 aacgaagtca aaggcatcaa ccgcgtggtg tacgatgtca gcggcaaacc gcctgccacc
    17101 atcgagtggg aataaccagc aaacagggct gcaccgtccg gcgcagtctt tcgattatcg
    17161 gaaaaaagga aaaaatatga gcacacaaga tttaagcggc aaaatcgctt tggtaaccgg
    17221 cgcatcgcgc ggtatcggtg cagcaattgc cgacacactg gcggcagccg gtgccaaagt
    17281 catcggtacg gcgaccagtg agagcggtgc ggcggcgatt agcgagcggt tggcgcaatg
    17341 gggcggcgaa ggccgcgtat taaattccgc cgaacccgaa accgtcgaaa acctgattgc
    17401 cgacatcgaa aaaacgttcg gcaaactcga tattctggtc aacaacgccg gcatcacccg
    17461 cgacaacctc ctgatgcgca tgaaagaaga agagtgggac gacatcatgc aggtcaacct
    17521 caaatccgtg ttccgcgctt ctaaagccgt cttgcgcggc atgatgaagc agcgcgccgg
    17581 ccgtatcatc aacatcacat ccgtcgtcgg cgtgatgggc aatgccggtc aaaccaacta
    17641 tgccgcggca aaagcaggct taatcggttt ctccaaatcc atggcgcgcg aagtcggcag
    17701 ccggggcatt accgtcaact gcgtcgcccc cggctttatc gataccgata tgacccgcgc
    17761 cctgccggaa gaaacccgcc aagcctttac cgcccaaacc gccttgggca gattcggcga
    17821 cgcgcaagac attgccgatg cggttttgtt cctcgcttcc gatcaggcga aatacattac
    17881 cggccagacg ctgcacgtca acggcggcat gctgatgccc tgacggacag ccgtgccgac
    17941 aatgccgtct gaagcccttt cagacggcat ttgcattccc aaacaaaatg aacacacacc
    18001 acaccctgcc ctgcccctgc ggttcaggca caagctgaga cctttgcaaa actcctttcc
    18061 ctcccgacag ccgaaaccca aacacaggtt ttcgtctatt ttcgccccaa ata
//
LOCUS       DAWEYF010000026        18030 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.026, whole genome shotgun sequence.
ACCESSION   DAWEYF010000026 DAWEYF010000000
VERSION     DAWEYF010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18030
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.026"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..516
                     /locus_tag="WGN93_000623"
     CDS             <1..516
                     /locus_tag="WGN93_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ0226559.1"
                     /translation="RGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLD
                     EGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFA
                     NYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRT
                     VGAGVVSSVIA"
     gene            534..845
                     /gene="rpsJ"
                     /locus_tag="WGN93_000624"
     CDS             534..845
                     /gene="rpsJ"
                     /locus_tag="WGN93_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEZ0226560.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            966..1290
                     /locus_tag="WGN93_000625"
                     /pseudo
     CDS             966..1290
                     /locus_tag="WGN93_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1534..2178
                     /gene="rplC"
                     /locus_tag="WGN93_000626"
     CDS             1534..2178
                     /gene="rplC"
                     /locus_tag="WGN93_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ0226561.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            2178..2798
                     /gene="rplD"
                     /locus_tag="WGN93_000627"
     CDS             2178..2798
                     /gene="rplD"
                     /locus_tag="WGN93_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ0226562.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            2795..3109
                     /gene="rplW"
                     /locus_tag="WGN93_000628"
     CDS             2795..3109
                     /gene="rplW"
                     /locus_tag="WGN93_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ0226563.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            3115..3948
                     /gene="rplB"
                     /locus_tag="WGN93_000629"
     CDS             3115..3948
                     /gene="rplB"
                     /locus_tag="WGN93_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ0226564.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     SNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            3955..4233
                     /gene="rpsS"
                     /locus_tag="WGN93_000630"
     CDS             3955..4233
                     /gene="rpsS"
                     /locus_tag="WGN93_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ0226565.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            4242..4571
                     /gene="rplV"
                     /locus_tag="WGN93_000631"
     CDS             4242..4571
                     /gene="rplV"
                     /locus_tag="WGN93_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ0226566.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            4581..5273
                     /gene="rpsC"
                     /locus_tag="WGN93_000632"
     CDS             4581..5273
                     /gene="rpsC"
                     /locus_tag="WGN93_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ0226567.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            5257..5673
                     /gene="rplP"
                     /locus_tag="WGN93_000633"
     CDS             5257..5673
                     /gene="rplP"
                     /locus_tag="WGN93_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ0226568.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            5673..5864
                     /gene="rpmC"
                     /locus_tag="WGN93_000634"
     CDS             5673..5864
                     /gene="rpmC"
                     /locus_tag="WGN93_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ0226569.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            5864..6127
                     /gene="rpsQ"
                     /locus_tag="WGN93_000635"
     CDS             5864..6127
                     /gene="rpsQ"
                     /locus_tag="WGN93_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ0226570.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            6349..6717
                     /gene="rplN"
                     /locus_tag="WGN93_000636"
     CDS             6349..6717
                     /gene="rplN"
                     /locus_tag="WGN93_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ0226571.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            6729..7052
                     /gene="rplX"
                     /locus_tag="WGN93_000637"
     CDS             6729..7052
                     /gene="rplX"
                     /locus_tag="WGN93_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ0226572.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            7062..7601
                     /gene="rplE"
                     /locus_tag="WGN93_000638"
     CDS             7062..7601
                     /gene="rplE"
                     /locus_tag="WGN93_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ0226573.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            7604..7909
                     /gene="rpsN"
                     /locus_tag="WGN93_000639"
     CDS             7604..7909
                     /gene="rpsN"
                     /locus_tag="WGN93_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ0226574.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            7925..8317
                     /gene="rpsH"
                     /locus_tag="WGN93_000640"
     CDS             7925..8317
                     /gene="rpsH"
                     /locus_tag="WGN93_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ0226575.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            8331..8864
                     /gene="rplF"
                     /locus_tag="WGN93_000641"
     CDS             8331..8864
                     /gene="rplF"
                     /locus_tag="WGN93_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ0226576.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            8878..9231
                     /gene="rplR"
                     /locus_tag="WGN93_000642"
     CDS             8878..9231
                     /gene="rplR"
                     /locus_tag="WGN93_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ0226577.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            9250..9768
                     /gene="rpsE"
                     /locus_tag="WGN93_000643"
     CDS             9250..9768
                     /gene="rpsE"
                     /locus_tag="WGN93_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ0226578.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            9761..9946
                     /gene="rpmD"
                     /locus_tag="WGN93_000644"
     CDS             9761..9946
                     /gene="rpmD"
                     /locus_tag="WGN93_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ0226579.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            9948..10382
                     /gene="rplO"
                     /locus_tag="WGN93_000645"
     CDS             9948..10382
                     /gene="rplO"
                     /locus_tag="WGN93_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ0226580.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            10394..11704
                     /gene="secY"
                     /locus_tag="WGN93_000646"
     CDS             10394..11704
                     /gene="secY"
                     /locus_tag="WGN93_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ0226581.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            11709..11927
                     /gene="infA"
                     /locus_tag="WGN93_000647"
     CDS             11709..11927
                     /gene="infA"
                     /locus_tag="WGN93_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ0226582.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            11948..12061
                     /gene="rpmJ"
                     /locus_tag="WGN93_000648"
     CDS             11948..12061
                     /gene="rpmJ"
                     /locus_tag="WGN93_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ0226583.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            12127..12489
                     /gene="rpsM"
                     /locus_tag="WGN93_000649"
     CDS             12127..12489
                     /gene="rpsM"
                     /locus_tag="WGN93_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ0226584.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            12509..12904
                     /gene="rpsK"
                     /locus_tag="WGN93_000650"
     CDS             12509..12904
                     /gene="rpsK"
                     /locus_tag="WGN93_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ0226585.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            12924..13544
                     /gene="rpsD"
                     /locus_tag="WGN93_000651"
     CDS             12924..13544
                     /gene="rpsD"
                     /locus_tag="WGN93_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ0226586.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            13570..14556
                     /gene="rpoA"
                     /locus_tag="WGN93_000652"
     CDS             13570..14556
                     /gene="rpoA"
                     /locus_tag="WGN93_000652"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ0226587.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            14580..14948
                     /gene="rplQ"
                     /locus_tag="WGN93_000653"
     CDS             14580..14948
                     /gene="rplQ"
                     /locus_tag="WGN93_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ0226588.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            15095..15808
                     /gene="minC"
                     /locus_tag="WGN93_000654"
     CDS             15095..15808
                     /gene="minC"
                     /locus_tag="WGN93_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ0226589.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            15837..16652
                     /gene="minD"
                     /locus_tag="WGN93_000655"
     CDS             15837..16652
                     /gene="minD"
                     /locus_tag="WGN93_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ0226590.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            16656..16919
                     /gene="minE"
                     /locus_tag="WGN93_000656"
     CDS             16656..16919
                     /gene="minE"
                     /locus_tag="WGN93_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ0226591.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            16923..17843
                     /gene="oxyR"
                     /locus_tag="WGN93_000657"
     CDS             16923..17843
                     /gene="oxyR"
                     /locus_tag="WGN93_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ0226592.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(17840..>18030)
                     /locus_tag="WGN93_000658"
     CDS             complement(17840..>18030)
                     /locus_tag="WGN93_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226593.1"
                     /translation="LIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNIL
                     AYRVVGSGKWRFENNACA"
BASE COUNT         4928 a         3488 c         4474 g         5140 t
ORIGIN      
        1 cgcggtacag tagtaaccgg ccgtgtagag cgcggtatca tccacgttgg tgacgagatt
       61 gaaatcgtcg gtctgaaaga aacccaaaaa accacttgta ccggtgttga aatgttccgc
      121 aaactgctgg acgaaggtca ggcgggcgac aacgtaggcg tattgctgcg cggtaccaaa
      181 cgtgaagacg tggaacgcgg tcaggtattg gccaaaccgg gtactatcac tcctcacacc
      241 aagttcaaag cagaagtgta cgtattgagc aaagaagagg gtggccgcca taccccgttc
      301 ttcgccaact accgtccgca attctacttc cgtaccaccg acgtaaccgg cgcggttact
      361 ttggaagaag gtgtggaaat ggtaatgccg ggtgagaacg taaccattac cgtagaactg
      421 attgcgccta tcgctatgga agaaggcctg cgctttgcga ttcgcgaagg cggtcgtacc
      481 gtgggtgccg gcgtggtttc ttctgttatc gcttaattga aggatattga taaatggcaa
      541 accaaaaaat ccgtatccgc ctgaaagctt atgattacgc cctgattgac cgttctgcac
      601 aagaaatcgt tgaaactgca aaacgtaccg gtgccgttgt aaaaggtccg attccgttgc
      661 cgaccaaaat cgaacgtttc aacattctgc gttctccgca cgtgaacaaa acttcccgtg
      721 aacaattgga aatccgcacc cacttgcgcc tgatggacat cgtggattgg accgataaaa
      781 ctaccgatgc gctgatgaag ctggatttgc cggccggtgt tgatgtagaa atcaaagtcc
      841 aataattcgg actattgaaa atccccaagc aatcaatgct tggggatttt ttatgttatg
      901 ccgagacctt tgcaaaattc cccaaaatcc cctaaattcc caccaagaca tttaggggat
      961 ttctcatgag caccttcttc caacaaaccg cccaagccat gattgccaaa cacatcgacc
     1021 gtttcccgct attgaagttg gaccaggtga ttgattggca gccgatcgaa caatacctga
     1081 accgtcaaaa atccgttacc tccgagatta ccgcggccgt cccgcctacc cgctgttgtc
     1141 catgttcaaa gccgttctgc tcggacaatg gcacagcctc tccgatcccg aactcgagca
     1201 cagcctcatc acccgcatcg atttcaacct gttttgccgc tttgacgaac tgagcatccc
     1261 cgattacagt catcaaccat attccggttt gtcggagaaa gatgcatacg ctgtgatgac
     1321 cggataccga ccctttaaaa gagtctgacc ctatgccgtc tgaaaattca aaacgcttca
     1381 gacggcatat tgaagatatt tctgatattt ctgttgatat ttctttaact tgtcagatat
     1441 aatgccgagc ttggtacatt tgtgccaagt ttaactttgt ctgaaagaca ggccaatcgt
     1501 agcctgtccc tttactttaa aaggaaaata atcatgactt taggtctggt tggacgcaaa
     1561 gttggtatga cccgcgtgtt cgacgaacag ggtgtttctg ttccggtaac cgttttggat
     1621 atgtctgcca accgcgttac acaagtaaaa tccaaagata ctgacggcta tactgccgtt
     1681 caagttacct ttggtcagaa aaaagccaat cgtgtcaaca aagccgaagc cgggcacttt
     1741 gcaaaagcag gtgttgaagc cggtcgcggt ttgattgagt ttgctttgac tgaagaaaaa
     1801 ctggctgaat tgaaagctgg tgacgaaatc accgtttcta tgtttgaagt cggtcaactg
     1861 gtcgatgtaa ccggtacctc taaaggtaaa ggtttctccg gcacgattaa acgtcataac
     1921 ttcggcgccc aacgtacttc ccacggtaac tcccgctctc accgcgttcc aggttctatc
     1981 ggtatggcac aagacccggg tcgcgtgttc cccggtaagc gcatggccgg ccaatacggc
     2041 aacaccaagg caactgttca aaaattggaa gttgtccgtg ttgatgcaga acgccaactg
     2101 ctgttggtta agggtgctgt tccgggtgcg gtcaacagcg atgttgtagt tcgtcccagc
     2161 gtgaaagtag gtgcgtaatg gaattgaaag taattgacgc taaaggacaa gtttcaggca
     2221 gcctgtctgt ttctgatgct ttgttcgccc gcgaatacaa tgaagcgttg gttcatcagc
     2281 tggtaaatgc ctacttggca aacgcccgct ccggtaaccg cgctcaaaaa acccgtgccg
     2341 aagtaaaaca ctcaaccaaa aaaccatggc gtcaaaaagg taccggccgt gcccgttccg
     2401 gtatgacttc ttctccgctg tggcgtaaag gtggtcgcgc gttcccgaac aaacccgacg
     2461 aaaacttcac tcaaaaagta aaccgcaaaa tgtaccgtgc cggtatggcg actattctgt
     2521 cccaattgac tcgtgacgag cgtttgtttg cgattgaggc gttgactgcc gaaactccta
     2581 aaaccaaagt ttttgctgaa caagtgaaaa atctgggtct agagcaagtg ttgtttgtaa
     2641 ccaaacagct cgacgagaat gtttacttgg cttcacgcaa cttgccaaac gtgttggttt
     2701 tggaagctca acaagttgat ccttacagct tgctgcgtta caaaaaagta atcatcacta
     2761 aagatgcagt tgcacaatta gaggagcaat gggtatgaat caacaacgtt tgactcaagt
     2821 gattttggca cctatcgttt ctgaaaaaag caacgtattg gctgaaaaac gcaaccaaat
     2881 gacgtttaaa gttttggcaa atgcaaccaa acctgaaatc aaagcggctg ttgagctgct
     2941 gtttggtgtt caagttgctt ctgtaactac cgttacaact aaaggcaaaa ctaagcgttt
     3001 tggtcgtact ttgggccgcc gcagcgatgt taaaaaagct tatgtaagct tggctgccgg
     3061 tcaagagttg gatttggaag ccgctgctgc agctgcagat aaggaataaa caaaatggca
     3121 atcgttaaaa tgaagccgac ctctgcaggc cgtcgcggca tggttcgcgt ggtaacagaa
     3181 ggtttgcaca aaggtgcgcc ttatgcacct ttgctcgaaa agaaaaattc tactgccggt
     3241 cgtaacagta atggtcatat caccacccgt cacaaaggcg gcggtcataa acaccattac
     3301 cgtgttgtag actttaaacg taacaaagac ggcattcctg ctaaggtaga gcgtatcgaa
     3361 tacgatccta accgtactgc cttcatcgca ctgttgtgct atgcagacgg cgagcgtcgt
     3421 tacatcatcg ctcctcgcgg tattcaagtc ggtgccgtat tggtttccgg tgctgaagct
     3481 gccatcaaag taggcaacac cctgccgatc cgcaacattc ccgttggtac gactatccac
     3541 tgtatcgaaa tgaaacccgg taaaggtgct caaatcgcac gttctgccgg tgcttctgcg
     3601 gtattgctgg ctaaagaagg cgcgtacgct caagtccgtc tgcgctctgg cgaagttcgt
     3661 aaaatcaacg taaattgccg tgcgaccatc ggtgaagttg gtaacgaaga gcaaagcctg
     3721 aaaaaaatcg gtaaagccgg tgccaaccgt tggcgcggta ttcgtccgac cgtacgcggt
     3781 gttgtcatga atcctgtcga tcacccgcat ggtggtggtg aaggccgtac gggcgaggcc
     3841 cgcgaaccgg tcagcccatg gggtactcct gctaaaggct accgcactcg taataacaaa
     3901 cgcacggata acatgattgt tcgtcgccgt tactcaaata aaggttaatt tagtatggct
     3961 cgttcattga aaaaaggccc atatgtagac ctgcatttgc tgaaaaaagt agatgctgct
     4021 cgcgcaagca acgacaaacg cccgattaaa acctggtctc gtcgttctac cattctgcct
     4081 gattttatcg gtctgaccat tgctgtgcac aacggccgca cccatgtgcc tgtgtttatc
     4141 agcgacaata tggttggtca taaattaggc gaattctcat tgacccgtac ctttaaaggc
     4201 cacttggccg ataaaaaggc taaaaagaaa taaggtgaat catgagagta aatgcacaac
     4261 ataaaaatgc ccgtatctct gctcaaaagg ctcgtttggt agctgatttg attcgtggta
     4321 aagacgttgc ccaagctttg aatattttgg ctttcagtcc taaaaaaggt gccgagctga
     4381 ttaaaaaagt attggagtca gctattgcta atgccgagca caataacggt gcggacattg
     4441 atgaactgaa agtggtaact atctttgttg acaaaggccc aagcttgaaa cgttttcaag
     4501 ctcgcgccaa aggtcgcggt aaccgcatcg aaaaacaaac ttgtcatatc aatgtgacag
     4561 tgggtaacta aggaaaagct atgggacaaa agattaaccc tacaggcttt cgcctggcgg
     4621 taactaaaga ctgggcttca aaatggtttg ctaaaagcac cgacttttct actgttttga
     4681 agcaggatat cgatgttcgc aattatttgc gtcaaaaatt ggccaatgct tcggttggtc
     4741 gagtggttat tgaacgccct gcaaaatctg cacgcattac cattcactcc gctcgtccgg
     4801 gtgtggttat cggtaaaaaa ggtgaggata tcgaggtttt gaaacgtgac ttgcaagtct
     4861 tgatgggtgt acctgttcat gtaaatattg aagagattcg ccgtcctgag ttggatgctc
     4921 aaattattgc tgacggtatt gcccagcagt tggaaaagcg cgttcaattc cgtcgtgcta
     4981 tgaaacgagc aatgcaaaat gcaatgcgtt ctggtgctaa aggcattaag attatgactt
     5041 caggccgtct gaatggtgcg gatattgccc gtagcgaatg gtatcgtgaa ggtcgtgtgc
     5101 cactgcatac tttacgtgca aatgtagatt atgcaaccag cgaagcgcac accacatatg
     5161 gtgtattggg tctgaaagtt tgggtttata cggaaggcaa tattaaatct tccaaacctg
     5221 aacatgagag taaacaaaga aaggcaggta gacgtaatgc tgcagccaac tagactgaaa
     5281 taccgtaagc aacaaaaggg tcgcaatact ggcatcgcta ctcgcggtaa taaggtaagt
     5341 ttcggtgagt tcggcttgaa agccgtaggt cgtggtcgtt tgactgcccg tcaaatcgaa
     5401 gctgctcgtc gtgcaatgac ccgtcatatc aaacgtggtg gtcgtatttg gattcgtgta
     5461 ttccctgata aaccgattac tgaaaagcct attcaagttc gtatgggtgg cggtaaaggt
     5521 aacgtggaat attacattgc cgaaattaaa ccaggtaaag tgttgtatga aatggatggc
     5581 gttccagagg aactggctcg tgaagcattc gagttggctg ctgccaaatt gcctattcct
     5641 acaacctttg tagtaagaca ggtgggtcaa taatgaaagc aaatgaattg aaagacaaat
     5701 ccgttgagca gttgaatgca gatttgttgg acttgttgaa agctcagttt ggcttacgta
     5761 tgcaaaacgc taccggtcaa ttaggcaaac caagtgaatt gaaacgtgta cgtcgcgata
     5821 ttgctcgtat taaaaccgtt ttaactgaaa aaggtgctaa gtaatgagcg aaactaaaaa
     5881 tgttcgtact ttgcaaggca aagtagtaag cgacaaaatg gataaaaccg taacagtatt
     5941 ggttgagcgt aaagtaaaac atccgctgta tggtaagatt attcggttat ctactaaaat
     6001 ccatgcccat gatgaaaata atcaatatgg aattggtgat gtggttgtta tatcggaatc
     6061 ccgtccattg tcaaaaacta aatcttgggt tgtcagtgag ctggttgaga aagcacgttc
     6121 tatttaagaa ttaaagcaac gtgcttggaa tgggaaacga agtattgcag caaatttaat
     6181 ttgcgtgtaa acttcgtttc ctgtctttca gtttcttctg gaagtttctt ccctttcggg
     6241 gtccaagact ggtttacttg aaccgcaagg tttcatttaa taagcagcgg ctttgctgta
     6301 agttatctga aagtggtaaa ttaagttggt taatttaaag gtaataacat gattcaaatg
     6361 cagaccatct tagatgtggc tgataactct ggtgcgcgtc gcgtaatgtg tatcaaggta
     6421 ttgggcggat ctaagcgtcg ctacgcttct gttggcgata ttattaaagt ggcagttaaa
     6481 gatgcggctc cgcgtggccg tgtcaaaaaa ggcgatgtat ataatgcggt agttgttcgt
     6541 actgctaagg gtgtacgtcg tcctgatggt gcgttaatta aattcgataa caatgccgcc
     6601 gtgttactga ataataaact tgaacctttg ggtactcgta tctttggtcc ggtaacccgt
     6661 gaattgcgta ctgagcgatt tatgaaaatc gtttcattgg cacctgaagt attataagga
     6721 atggcacgat gaataaaatc attaaaggcg atagggttgt agtaattgct ggtaaggata
     6781 aaggtaagca gggtcaagta gttcgagtgt tgggtgataa agttgttgtt gagggcgtta
     6841 atgttgtaaa acgccatcaa aaacctaatc caatgcgtgg cattgagggc ggtattatta
     6901 ctaaagaaat gcctttggat atttctaata tcgcaatcct gaatccggaa actaataaag
     6961 cggaccgtgt tggtattaag ctgattgaaa atgaaggcaa agttaaacgc gttcgtttct
     7021 tcaaatcaaa tggctctatc attggggcat aaggagataa catggctcgg ttgagagagt
     7081 tttataaaga gacagttgtt cctgaattgg ttaaacaatt tggttacaaa tcagtaatgg
     7141 aagtcccgcg tattgaaaaa atcaccttga atatgggtgt gggtgaggct gttgctgaca
     7201 aaaaagttat ggaacatgct gtttccgatt tagagaaaat tgccggtcaa aaaccggttg
     7261 ttactgttgc ccgtaaatct atcgcaggtt ttaaaatccg tgataactat ccggttggtt
     7321 gcaaagtaac attgcgtcgt gatcaaatgt ttgaattctt ggatcgtttg attactattg
     7381 cattacctcg cgtacgtgac ttccgtggtg tgagcggtaa atcatttgat ggccgtggca
     7441 attacaatat gggtgttcgt gagcaaatta tttttccgga aattgaatac gataaaattg
     7501 atgctttgcg tggtttgaat attactatta ctactacagc aaaaaccgat gaggaagcga
     7561 aagctttatt gtcattgttt aaatttccgt tcaaaggata atcatggcta agaaagcact
     7621 tattaatcgt aatctgaaac gtcaagcttt ggctaaaaaa tatgcggcta aacgcgcggc
     7681 aattaaagcg gtaatcaatg attcgaatgc aactgaggaa gagcgttttg aggctcgttt
     7741 gaggtttcaa tccattcctc gtaatgcggc acctgtgcgt caacgtcgtc gttgtgcttt
     7801 gacaggtcgc cctcgtggta ctttccgtaa atttggtttg ggtcgtatta aaatccgtga
     7861 aatcgccatg cgtggcgaaa ttccgggtgt tgttaaagcc agctggtaat aggagtaatt
     7921 aagaatgagt atgcatgatc ctatttccga tatgttgact cgtatccgca atgcgcaacg
     7981 tgctaataaa gcagcggttg caatgccttc ttcaaaatta aagtgtgcta ttgcaaaggt
     8041 attgaaagaa gaaggatata ttgaggactt cgcagtttca tctgacgtaa agtctatatt
     8101 ggaaattcaa ttaaaatact atgcaggtcg tcctgtaatt gaacaaatca agcgtgtatc
     8161 tcgccccggt ttgcgtattt ataaagcgtc tagtgagatt ccaagtgtta tgaatggctt
     8221 gggtattgct attgttagta cttctaaagg tgtaatgact gatcgtaaag cacgttctca
     8281 aggtgttggt ggtgagttgt tatgcattgt agcctagtgg aggaaaagaa atgtcacgtg
     8341 tcgcaaaaaa cccagtgact gttcccgctg gtgtagaagt aaaatttgga acagaggcat
     8401 tagttattaa gggtaagaac ggtgaattgt cttttccttt gcattctgat gtagccattg
     8461 aatttaatga tggcaaattg gcttttgttg cgaataacag cagtaaacaa gcaaatgcaa
     8521 tgtctggtac tgctcgcgca ttagtcagca atatggttaa aggtgtttca gaaggttttg
     8581 agaaaagatt gcaattgata ggtgtgggtt atcgtgctca agcacaaggt aaaatcttga
     8641 atctgtcttt gggtttttct catccgatcg tatatgaaat gcctgaaggt gtctccgttc
     8701 aaactcctag ccaaacagag attgttttaa ccggctcgga taaacaagtt gttggtcaag
     8761 ttgctgctga gattcgtgcg ttccgtgctc ctgagcctta taaaggtaaa ggtgttcgct
     8821 atgtaggaga agtagtggta atgaaagaag ccaagaaaaa ataattgagg ttcactaatg
     8881 gataaacata caacccgact ccgtcgtgca cgcaaaaccc gtgctcgtat tgcggacttg
     8941 aaaatggtaa gattatgtgt gttccgaagc aataatcata tttatgctca agtaattagt
     9001 gctgaaggtg ataaagtatt ggctcaagcc tctacattgg aagctgaggt gcgcggtagt
     9061 ctgaaatctg gaagcaatgt tgaagcagct gcaatagttg gtaaacgtat cgctgagaag
     9121 gctaaagcag caggtgtaga aaaggttgct tttgatcgtt caggtttcca atatcacggt
     9181 cgtgtgaagg ctttggctga agctgctcgt gaaaatggtt taagcttcta aatatttgga
     9241 gactttcaga tggcaaaaca tgaaattgaa gaacgcggtg acggtctgat tgaaaagatg
     9301 gtcgcagtta accgtgtaac caaagtagtt aaaggtggtc gcattatggc tttctctgcg
     9361 ctaactgttg ttggtgatgg agatggtcgt attggtatgg gtaaaggtaa gtcaaaagaa
     9421 gtgcctgttg cagtccaaaa ggcgatggat caagcacgac gctctatgat taaggtacca
     9481 ttaaaaaatg gtacgattca tcatgaggtt attggtcgac atggtgctac taaagtattt
     9541 atgcagcctg ctaaagaggg tagtggcgta aaagccggtg gacctatgcg tttggttttt
     9601 gatgctatgg gcattcataa tatctccgcc aaagtgcacg gatctactaa cccatataat
     9661 atcgtacgtg caacattaga tggtttgtct aagttgcata ctcctgctga tatcgcagcc
     9721 aaacgtggct tgacagtgga agacattttg ggagttaacc atggctgaac aaaaaaagat
     9781 tagggttaca ttggttaaaa gcctgattgg tacaattgaa tctcatcgtg catgtgcacg
     9841 cggtttaggt ttgcgtcgtc gcgagcatac ggtagaggtt ttagataccc ctgaaaaccg
     9901 tggtatgatt aataaaatca gctacttgtt gaaagtggag tcttgatatg tttttgaata
     9961 caattcaacc tgctgttggt gctacgcatg ctggtcgtcg tgttggacgc ggtattggta
    10021 gtggtcttgg caaaacgggt ggtcgtggtc ataaaggtca aaagagccgg tctggtgggt
    10081 ttcataaggt gggtttcgag ggtggtcaaa tgcccttgca acgacgcctc cctaaaagag
    10141 gttttaaatc tttaacagca tcagctaatg cacagcttcg tttaagtgaa ctggaatcaa
    10201 ttgctgttaa tgagattgat attttggtct taaagcaagc gggtctgatt gcatctacag
    10261 tctctaatgt taaagttatt gcttctggtg aaatttctaa ggcagttgct ttgaagggta
    10321 ttaaagttac caaaggtgcg agagctgcta tcgaggctgt tggtggtaag attgaaatgt
    10381 aaggtttaat attgtggcta atcaacaaac gtcatcaggt tcatccaaat ttggagatct
    10441 taagaaacgt cttttgtttc tatttggagc attgattgtt tttcgaattg gtgcccatat
    10501 acccgtacct ggagttgatg ctgttgcttt agctaaatta tacgaaagcg ctggaaacgg
    10561 catcctggga atattgaata tgttttccgg tgggtcgtta gagcgcttta gtatatttgc
    10621 aataggaatt atgccatata tttcagcttc tattattgta cagctcgctt ctgaaatttt
    10681 gccatcattg aaggctttaa aaaaagaagg ggaggctggt agaaaggtaa ttacgaaata
    10741 tactaggtat ggtactgttt tgttagcaat tcttcaaagt ctaggtgttg catctttcgt
    10801 atttcagcaa ggaattgttg taacaagttc atttgagttt catgtttcca cggtagtttc
    10861 tttggtaacg ggaaccatgt ttcttatgtg gcttggggag caaattactg aaaggggtat
    10921 cgggaacggt atttctttaa tcattacggc aggtattgct tcaggtattc cttcgggtat
    10981 tgcaaagctg gttacactga cgaaccaagg ttctatgagc atgcttacgg cgttgtttat
    11041 tgtatttggt gccttattat taatttattt ggttgtatac tttgaaagtg cacagcggaa
    11101 gattcctatt cattatgcaa aacgccagtt taatggtagg gcgggtagtc aaaatacgca
    11161 tatgcctttc aagttgaata tggctggtgt tattccccca atttttgctt ccagtattat
    11221 tctatttcca tctactcttt taggttggtt tggttcggct gatacaaata gtgttttgca
    11281 caaaatagct ggattgttac aacacggtca attgctgtat atggctttat ttgcagcgac
    11341 agttattttc ttttgttatt tttatacggc tttggttttt agccctaaag aaatggcaga
    11401 gaatttaaaa aagagtggtg cttttgttcc tgggattaga cctggtgagc agacctctag
    11461 gtatttagaa aaagttgtat tacgtttgac attgtttgga gctctttata ttacaactat
    11521 ttgtttaatt ccagagttct taactacggt tttaaatgta cctttttatt tgggtggcac
    11581 gtctttgttg attctagttg ttgtaacgat ggattttagt acacaaataa attcgtatag
    11641 gcttactcaa cagtatgata agttaatgac tcgttcagaa atgaaatcat tttctcggaa
    11701 atagaattat ggcgaaagaa gatactatcc aaatgcaagg tgaaattctt gaaactttac
    11761 ctaatgcaac atttaaagta aaacttgaga atgaccatat tgtattgggt catatttctg
    11821 ggaagatgcg gatgcattac attcgtattt ctccgggaga taaggtcaca gtagagctga
    11881 caccttatga tctaactagg gctcgaatcg ttttcagagc aagataaacc aataaaagga
    11941 aaataaaatg cgtgtacaac catctgttaa gaaaatttgc cgaaattgca agattattcg
    12001 tcgaaatcgt gtagttcgtg taatttgtac tgatctccgt cacaaacagc gtcaaggtta
    12061 atggaatatt tcttttaatg tgattctgtg atatagtgac acactttgcc ctaaaaagga
    12121 aaaaatatgg ctcgtattgc aggggtaaat atccctaata acgcacacat cgtaattggt
    12181 cttcaggcta tttacggtat tggtgctact cgtgctaaat tgatttgtga ggctgcaaat
    12241 attgcgcctg atactaaagc aaaagatttg gacgagactc aattagatgc tttgcgtgac
    12301 caagttgcca agtatgaagt agaaggtgat ttgcgtcgtg aggtaactat gagtatcaag
    12361 cgattgatgg acatgggctg ctatcgtggc ttccgtcatc gtcgcggctt accatgccgc
    12421 ggtcaacgca ctcgtacaaa tgcgcgtacc cgcaaaggtc cgcgtaaagc gattgctggt
    12481 aagaaataaa ttttaaggaa ttttattaat ggctaaagca aacacagctt cacgtgtacg
    12541 taaaaaagta cgtaaaaccg tgagtgaggg tattgtgcac gttcatgcat ctttcaacaa
    12601 taccatcatt acaatcactg accgtcaagg caatgcgttg tcttgggcta cctctggcgg
    12661 cgctggtttt aaaggttctc gtaaaagtac accatttgca gcacaagttg cagcagaagc
    12721 agctggtaaa gttgcccaag agtatggcgt taaaaattta gaggttcgta ttaaaggtcc
    12781 aggtccaggt cgtgaatcct ctgtacgtgc tttgaatgct cttggtttca agattaccag
    12841 cattactgac gttaccccgt tgcctcataa cggttgccgt ccgcctaaaa aacgtcgtat
    12901 ttaatattgg agtgatttga aacatggcac gttatattgg ccctaaatgt aagttggcac
    12961 gtcgcgaagg tacggatttg tttttgaaga gtgcgcgccg ctctttggat tctaaatgta
    13021 aaattgattc cgctcccggt cagcatggtg caaaaaaacc gcgtttgtca gactatggtt
    13081 tgcagttgcg tgaaaaacaa aaaatccgcc gtatttatgg cgtattagaa cgtcagttcc
    13141 gtcgttattt cgcagaagct gatcgtcgta aaggttctac cggcgagttg ctgttgcagt
    13201 tgctggaatc tcgtttggat aatgtcgttt atcgtatggg tttcggttct acccgagctg
    13261 aagcaagaca gcttgtttct cataaggcga tagttgtgaa tggacaagtt gtcaatattc
    13321 cttctttcca agtgaaagct ggtgatgttg tctcagttcg tgaaaaagcc aaaaaacagg
    13381 tacgtattca agaagcattg ggtttggcaa ctcaaatcgg cttgccgggt tgggtttctg
    13441 tagatgcgga taaacttgag ggtgtgttca aaaacatgcc ggatcgctcg gaattgaccg
    13501 gtgatattaa tgaacagctg gtggtagagt tctactctaa ataatgctag ctcagtgagg
    13561 gacagttaaa tgcagaatag cacaaccgaa tttttgaaac ctcgtcaaat tgatgtaaat
    13621 actttttctg caactcgtgc aaaagtatct atgcagccat ttgaacgtgg tttcggtcat
    13681 accttaggta atgctttgcg ccgtatctta ctgtcatcca tgaatggttt tgctcctact
    13741 gaagtagcta ttgccggtgt attacacgaa tattctactg ttgatggtat tcaggaagat
    13801 gttgttgaca ttttgctgaa tattaaaggt attgtgttta aactccatgg tcgtagccaa
    13861 gttcaacttg tgttgaagaa atcaggttca ggtgtcgtat ctgccggtga tattgagttg
    13921 ccgcatgatg tagaaattct gaatcctggt catgtcattt gtcatttggc tgataacggt
    13981 caaattgaga tggaaattaa agtagagcaa ggtcgtggtt atcaatctgt ttcaggtcgt
    14041 caggtagttc gtgatgagaa ccgtcagatt ggtgcaatcc agttggatgc gagcttttcg
    14101 cccatcagcc gtgttagctt tgaggttgaa cctgcacgtg tagagcagcg gacggatctt
    14161 gataagttgg ttttggatat cgaaaccgac ggttctattg atcctgagga agctgtacgc
    14221 agtgcggcac gtattttgat tgatcagatg tctatttttg ctgatttgca gggtacgcct
    14281 gtggaggagg ttgaagaaaa agcacctcct atcgaccctg ttcttttgcg tccggtggat
    14341 gatctggaat tgacagtacg ttcagctaat tgtttgaaag ctgaggatat ttattatatt
    14401 ggcgatttga ttcaacgcac tgaaaccgag cttcttaaaa cgccgaattt gggacgtaaa
    14461 tctttgaatg agattaagga agtattggca tctaaaggtt tgacactggg ttctaagttg
    14521 gaagcatggc cacctgtagg cttggaaaag ccttaatgaa gaattaaagg ataattgata
    14581 tgcgtcatcg taatggcaat cgcaaattaa accgtaccag cagtcatcgt gctgcaatgc
    14641 tgcgtaatat ggcgaattca ttattgactc acgaaactat tgtaacaact ctgcctaagg
    14701 ccaaggaatt gcgccgtgta gtagagccgt tgattacatt gggtaaaaag ccgtcattgg
    14761 caaaccgccg tttggcattt gaccgtactc gcgaccgtga tgttgtagta aaactgtttg
    14821 gcgatttggg tcctcgtttt actgctcgta acggtggtta tgttcgggtg ttgaaatacg
    14881 gattccgtaa aggtgataat gcacctctgg cactggttga attggttgac aaaccggctg
    14941 ctgagtaatt ttagtcatat aacgccatct gccgaaaagc aggtggcgtt atttttgcaa
    15001 tatctgatag gtaatagggt attggctatc atgtttaaaa tattaattga atagctaagg
    15061 tttgcgcggt aaacttacat cattaaaaaa ttctatgatg gtttatataa tgaatgcttt
    15121 cgatataaag tcgacaaaga tggacgtatt gtctatatct ttgcatacgt cagacttgtt
    15181 tgatttggaa gatgtgctgg tcaaattggg caagaagttt caagagtctg gtgttgttcc
    15241 atttgtgctg gatgttcaag agtttgatta tcccgagtct ttggatcttg ctgcattggt
    15301 ttcgttgttt tcaaggcatg gtatgcaaat tttgggtctg aagcattcta atgaacgttg
    15361 ggctgctgcg gctatgaagt atcatttgct gttttgtctg tctcattcgg aaaatgttaa
    15421 agaactgggt caggttgagg tgcagaacac ggaggatggt cagaaagcaa ggaaaacagt
    15481 attgattaca tcccctgtcc gtaccggtca gcaggtttat gccgaagatg gcgatttgat
    15541 tgttacgggg gcggtcagtc agggggcgga attgattgcg gatggcaata tacatattta
    15601 tgcgccgatg agggggcgtg ctttggccgg cgccaagggt gatacttctg cccgcatatt
    15661 tatccactcc atgcaggcag aactggtttc tgtggcgggt atttaccgta attttgaaca
    15721 ggatttgccg gatcatctgc acaagcagcc ggtacagata ttgttgcagg ataatcggtt
    15781 ggttatcagt gcaattggct cagagtaatt gtttgatatt ttaaaaagga aatattgtgg
    15841 caaaaattat tgtagtaact tcaggtaagg gcggtgtcgg taaaacgact accagtgcca
    15901 gtattgcgac aggtttggca ttacgcggat ataaaactgc ggtaattgat tttgatgtgg
    15961 gtttgcgtaa cctcgacctc attatgggtt gcgagcgtcg tgtcgtttat gacctgatca
    16021 atgtcattca gggggaggcg acgctcaacc aggctttgat taaagataaa aattgtgaaa
    16081 acctgtttat tttgccggct tcccagactc gggataaaga cgctttgaca cgcgagggcg
    16141 tagaaaaagt gatgcaggag ctgtccggca agaaaatggg ctttgagtat attatttgcg
    16201 actctcctgc cggtattgag cagggtgcat tgatggcgtt gtattttgct gatgaagcca
    16261 ttgtaacgac caatcctgag gtttccagtg tgcgtgactc cgacaggatt ttgggaattt
    16321 tgcaaagcaa atcccataag gcagagcaag gcggttcggt taaagaacat ctgttgatta
    16381 cgcgttattc tcccgaacgt gtggcaaaag gcgaaatgct gtctgtacag gatatttgcg
    16441 atattctgca tattcctttg ctgggtgtga ttcctgaatc ccaaaacgtc ttgcaggcat
    16501 ccaattccgg agaaccggtc atccatcagg acagcgtggc ggcttccgag gcatataagg
    16561 acgttattgc ccgtcttttg ggcgagaacc gtgaaatgcg tttcttggaa gctgagaaaa
    16621 aaagcttctt caaacgtctg tttggaggat aaggtatgtc attaatcgaa tttttattcg
    16681 gcagaaagca gaaaacggca accgttgccc gcgaccgcct tcaaatcatc attgcccaag
    16741 agcgcgccca agaaggtcag gctccggatt acctgccgac tttacgtaaa gagttgatgg
    16801 aagtcctgtc caaatatgtg aatgtttcat tagacaatat ccgtatttcc caagaaaagc
    16861 aggatggtat ggatgtgctt gagttgaaca ttactttgcc ggaacagaaa aaggtatagg
    16921 acatgacctt aaccgaattg cggtacatcg tcgcagtcgc ccaagaacgt catttcggca
    16981 gggcggcgcg gcgttgtttt gtcagccagc ccactttgtc tattgccatt aagaaattgg
    17041 aagaagagct tgccgtctct ttgtttgacc ggagcagcaa cgatattatt acgaccgagg
    17101 cgggggaacg tatcgttgca caggcgcgta aggtgttgga agaggcagag cttatcaggc
    17161 atttggcaaa tgaagaacaa aacgagctgg agggtgcgtt caaactcggg ctgattttta
    17221 cggttgcgcc gtacctgctg ccgaaactga ttgtctcgtt gcgccgtact gcaccgaaaa
    17281 tgcctttgat gttggaagag aattacacgc atactttgac cgagtcgctc aaacgcgggg
    17341 acgttgacgc gattatcgtt gccgaaccgt ttcaagagcc gggcattgtt accgaaccct
    17401 tgtatgacga accgtttttc gtgattgtcc cgaaagggca ttcatttgag gaactggatg
    17461 ccgtttcgcc acggatgctg ggtgaggagc aggttttgct gctgacggaa ggcaactgta
    17521 tgcgggatca ggtactctca agctgttccg aattggcggc gaaacaacgt atacaggggt
    17581 tgaccaatac attgcagggc agctcgatca atacaatccg ccatatggtc gccagcggtt
    17641 tggcaatcag cgtgttaccg gcaaccgcgc tgaccgaaaa cgatcatatg ctgttcagca
    17701 ttattccgtt tgaaggtacg ccgccaagcc ggcgggtcgt attggcgtac cgccgcaatt
    17761 ttgtccgtcc gaaggcgttg tcggcgatga aggcggcgat tatgcagtcg cagcttcacg
    17821 gggtaagttt tatccgcgac taggcgcagg cattgttttc aaaacgccat ttccctgagc
    17881 cgacaacacg gtatgccaag atattgccgt catcatcgat tttgagtata gcatcgccac
    17941 ggaaactgcc gtcctgaaga tattcgactt ttgcatcact gtgaatgttt tcatcagtgc
    18001 cgatgcaatg ccatgtatag tggattaaca
//
LOCUS       DAWEYF010000027        16779 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.027, whole genome shotgun sequence.
ACCESSION   DAWEYF010000027 DAWEYF010000000
VERSION     DAWEYF010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16779
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.027"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(177..1346)
                     /locus_tag="WGN93_000659"
     CDS             complement(177..1346)
                     /locus_tag="WGN93_000659"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ0226594.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPSIAYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1520..1630)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1683..2579
                     /locus_tag="WGN93_000660"
     CDS             1683..2579
                     /locus_tag="WGN93_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ0226595.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQRLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLANVKGVKTLFFCCERLPDGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2623..3687)
                     /gene="tsaD"
                     /locus_tag="WGN93_000661"
     CDS             complement(2623..3687)
                     /gene="tsaD"
                     /locus_tag="WGN93_000661"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ0226596.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     GKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVK"
     gene            complement(3803..4990)
                     /gene="ccsB"
                     /locus_tag="WGN93_000662"
     CDS             complement(3803..4990)
                     /gene="ccsB"
                     /locus_tag="WGN93_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ0226597.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLCAEGKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4983..6935)
                     /locus_tag="WGN93_000663"
     CDS             complement(4983..6935)
                     /locus_tag="WGN93_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ0226598.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVNIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKGAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7212..7835)
                     /locus_tag="WGN93_000664"
     CDS             complement(7212..7835)
                     /locus_tag="WGN93_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ0226599.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            8041..8670
                     /locus_tag="WGN93_000665"
     CDS             8041..8670
                     /locus_tag="WGN93_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ0226600.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8791..11187)
                     /locus_tag="WGN93_000666"
     CDS             complement(8791..11187)
                     /locus_tag="WGN93_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ0226601.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPKVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11339..12454
                     /locus_tag="WGN93_000667"
     CDS             11339..12454
                     /locus_tag="WGN93_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ0226602.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQSTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12457..13056
                     /locus_tag="WGN93_000668"
     CDS             12457..13056
                     /locus_tag="WGN93_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ0226603.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKENKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            13057..13704
                     /locus_tag="WGN93_000669"
     CDS             13057..13704
                     /locus_tag="WGN93_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ0226604.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13722..14267
                     /locus_tag="WGN93_000670"
     CDS             13722..14267
                     /locus_tag="WGN93_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ0226605.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14286..16547
                     /locus_tag="WGN93_000671"
     CDS             14286..16547
                     /locus_tag="WGN93_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ0226606.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSEPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQAAAPAKQTNIDFRKDG
                     KNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKTPVQKVTLK
                     RLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISL
                     DFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQ
                     QGNIVNIAPRDELLAKDKALLQAEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNAD
                     TTGNRNTLISGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVE
                     AADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINLPITAAANS
                     ISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTSIAN
                     GGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTILCISTKNLN
                     TQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFIT
                     PRIMGTAGNSLRY"
BASE COUNT         4499 a         4758 c         3825 g         3697 t
ORIGIN      
        1 ctcatggaaa atcccctaaa tgtcttggtg ggaatttagg ggattttggg gaattttgca
       61 aaggtctcta tctgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
      121 tatataaaaa tgccgtctga actgttcaga cggcattttt gattttcaaa ccggaattac
      181 agccccgctg ccgccctcaa tgcagcagct ttgtcggtgc gctcccaagt gaactcaggt
      241 tcttcgcggc cgaaatgtcc gtaagcggcg gatttactgt aaatcgggcg caagaggtcg
      301 agcatttgga cgatgccttt ggggcgcagg tcgaaatgtt cgcgaactaa ggtaatcagt
      361 ttttcttcgc tgattttgcc tgtgccgaaa gtatcgatgg aaatcgaagt cggttcggca
      421 acgccgatgg cgtaggaaac ttggatttgg cattgggttg ccaatcctgc ggcgacgatg
      481 tttttcgcca catagcggca ggcgtaggcg gcggaacggt caaccttgga cgggtctttg
      541 ccggaaaacg cgccgccgcc gtgcggagcc gcgccgccgt aggtatcgac gatgatttta
      601 cggccggtca aaccgcagtc gccttgcggg ccgccgatga cgaagcggcc ggtcgggttg
      661 atcaggtatt tggtttcgtc ggtcagcagt tcagacggca ggacgggctt gataatctgc
      721 tcgatgacgg cgtttttcag ttcttcgtaa gcgatggacg gatcgtgctg ggtagagagg
      781 acgacggtat caatgcgttt taccttaccg gtttcgctgt cgtaaaccac ggtcaactgc
      841 gcttttgcgt cgggacgcag ccacggcagg cggccgtctt tacgcaattc gctttggcgt
      901 tgcatcaggc ggtggctgta atagatggca aacggcatca gggtcggggt ttcgtcgcag
      961 gcataaccga acatcaaacc ttggtcgcct gcgccttggt tcaagtcgat accttcgcct
     1021 tcgtttacgc cttgggcgat gtcgggggat tgttggtcgt agtacacgcc gaccgcgcag
     1081 ccgttggcat caaagcccag ctcggaggag ttgtagccga tgcgtttgat ggtttcgcgt
     1141 gcgactttga tgtagtccac ttgggcggtg gtggtgattt cgcctgccaa tacgcacaag
     1201 cctgtgttga ccaaagtttc tgcggcgaca cgcgctttgg ggtcttgcgc caagatggca
     1261 tccaaaatcg catcggacac ttggtcggca actttgtccg gatggccttc ggataccgat
     1321 tcggaagtaa acagatattc gctcattgct attctttcat taaaaacagg ctgctgtgtt
     1381 ttcagacggc cttttatttc ggacagcgga aatcataaca aaaactccgc tttttctcta
     1441 tacaagtgag aaacattcgc acttgtctgc tgtttcggaa tcctgttgcg cgtttcttac
     1501 aggcaaaaaa attcccgcat taagcgggtt tggattgctc tggtgagcca catcggcttt
     1561 tcaaccgtcc accttacttt tccttttgaa aagcaggttg gcatggaatt cccaactctt
     1621 aatgcagcgc ggatggtagc agaaaagcct ttccgccgca atacttccct ttttcagacg
     1681 gcatgtttcg tttacaattc gggctgtttc cccctttgcg aaccgccatg cacatcctgt
     1741 tgaccgccct gctcaaatgc ctctccctgc tgccgctttc ctgtctgcac acgctgggaa
     1801 accggctcgg acatctggcg ttttaccttt taaaggaaga ccgcgcgcgc atcgtcgcca
     1861 atatgcgtca ggcaggcatg aatcccgacc ccaaaacggt caaagccgtt tttgcggaaa
     1921 cggcaaaagg cggtttggaa cttgcccccg cgtttttcag aaaaccggaa gacatagaaa
     1981 caatgttcaa agcggtacac ggctgggagc acgtgcagca ggctttggac aaacacgaag
     2041 ggctgctgtt catcacgccg cacatcggca gctacgattt gggcggacgc tacatcagcc
     2101 aacggctgcc attcccctta accgccatgt ataaaccgcc gaaaatcaaa gcgatagaca
     2161 aaatcatgca ggcgggcagg gttcgcggca aaggaaaaac cgcgcctacc agcatacaag
     2221 gggtcaaaca aatcatcaaa gccctgcgtt cgggcgaagc aaccatcgtc ctgcccgacc
     2281 acgtcccctc ccctcaagaa ggtggggaag gcgtatgggt ggatttcttc ggcaaacctg
     2341 cctataccat gacgctggcg gcaaaactgg caaacgtcaa aggcgtgaaa accctgtttt
     2401 tctgctgcga acgcctgcct gacgggcagg gtttcgattt gcacatccgc cccgtccaag
     2461 gggaattgaa cggcgacaaa gcccatgatg ccgccgtgtt caaccgcaat gccgaatatt
     2521 ggatacgccg ttttccgacg cagtatctgt ttatgtacaa ccgctacaaa atgccgtaac
     2581 gaaaataaaa atgccgtctg aacaatttca gacggcattt tgtcatttga cgatttccga
     2641 cagcggccag cgcggacgga cattgaacgc accgacctcc ctgcccttgc ccaggtgcat
     2701 cgcaccggca aaggcaatca tggcaccgtt gtccgtgcag tatgccgtcg gcgggaaaaa
     2761 cacgctgact ttttcggacg gatgtttcgg cttgcctttg ggggtcggga tttgcaccgt
     2821 catgttgccg aaagtttcac ggagcttgcg gtttgcaccg accccgccgg cgaccactac
     2881 ggttctgaac cctgtctgca acagggcttt tttcactttc gccgccaaca catcgactac
     2941 cgcatcttga aacgcacggc agatgtcgtt gcgtgtctgc tcaggaatgt catccgcccc
     3001 gttttccgcg cgcactttct cgacggcggt caatacggcg gttttcaaac ctgaaaaact
     3061 catctgcaaa tcgtcggaat gaatcattgg gcgcggaaaa acaaacgctt cgggcctgcc
     3121 cgattccgca agttccgaca gtttcgcacc gcccggatac ggcaagccca gcagtttcgc
     3181 cgttttgtcg aatgcctcgc ccgccgcatc atcgacgctc tcgcccaaaa gcgcgtagtc
     3241 gcctataccc ctgaccgcca taatctgcgt atgcccgccc gaaaccagca gcgcgacaaa
     3301 aggaaagtcg ggtttttcct ccgccaacag cggcgacagc agatgtcctt ccaaatgatg
     3361 gacggggatg acgggcttgc ccaatgccaa agccagtgca ttggcgtagc tcgaacccgc
     3421 cagcagcgca ccgcccaaac cgggtccctg cgtaaaggca accgcgtcaa tgtcgccata
     3481 cgatgcgccc gcctgcgcca aacagccttc cgtcaacgga acaaggcggc ggatatggtc
     3541 gcggcttgcc aattccggca caaccccgcc atattcggcg tgcattgcca tctgcgtgtg
     3601 cagacagtgc gcccgcaatc ctcgttccgt atcgtaaagc gcaacgccgg tttcgtcgca
     3661 agaagattcg attcctaata ccaacatggt ctgatgccgt taaaaactga aaaacgtatt
     3721 ctagcggatt tcggcacgac tgccgtatcc caaaaacgga acatgccgtc tgaagccctt
     3781 cagacggcat cgtcgcaccg tatcaaagcg ttccgtaaga atgcagcccg ctcaaaaaca
     3841 tattcacgcc gataaaggcg aatgcggtta cgaacaaacc gataatcgcc caccacgcca
     3901 gcactttgcc gcgccaaccg gcaaccagcc gcaagtgcag ccaaacggcg taattgagcc
     3961 agacgatgaa cgcccacgtc tctttcgggt cccaactcca atagcgtccc caagcatccg
     4021 ccgcccacag cgcacccaaa atggtggcaa tggtaaagaa cagaaagccg acggcaatcg
     4081 ccttatacat gacttcctca atcaacacgg attgcggcag ccacgatttc ccgccttttc
     4141 cttccgcaca cagggaaacc agttcggcaa taccgagcat cgcggaaatg caaaacgcgc
     4201 cgtaaccgat aaagtttgcc ggaacgtgga ttttcatcca ccaagattgc aatgccggaa
     4261 tcagcggctg gatggtatgc gcctcgcggg acacgctgta ccacaagaca aatccaacca
     4321 cgaccgccat aaagccgaac acgaagccgc ccaatttctg tatggcgaac ttaccttcat
     4381 aataaagata catcagcgcg gtaatcacca aaaacaggat gaacacttca tacaggttgg
     4441 aaaccggaat atgccccgca tcgggacgga gcagatagct ttcgtgccaa cgtaccagca
     4501 gaccggtaaa gcctgctacg gcagacaccc atgcaaacac ggttcccata cccaacagcg
     4561 tgttggtcgg cacatttttt acgcttgcca aaaccgcgcc cgaaatatag gcgaacaggg
     4621 cgaagaagac aaaggcgcac tgccacatga tcgccgactg gctgctgagg aaataccgca
     4681 acaggaaaat ctctgccgat ttgatgttgc cgccatacaa accgacggcg gcataggcaa
     4741 gcaatacgct taaaggaaca aaccagcgca tcggtttgaa aaaccaaccc aaaaacacgg
     4801 caataccggc acttgcccac aacatgaccg tttcgtaaat gtccatatgc ataccggaac
     4861 gggtctgtac gaaaaccgta gccgcaaaaa ccagcacggc aaatacccaa tcccaaagat
     4921 tcagattgct gatcaaagac ttctgaatca gcagctcgtg ttccggaagg gttttatagt
     4981 gttcagtcat gattcaagtc cttgccgagc cgttgcagac tctcgacgtg ttttggaaat
     5041 tccttctgca aatcccgttc gctgcgggcc gaagacatgg caaaacggat tttgccgtct
     5101 gaaaacaata cccacgcccg tttttcgcgc acataaaaca tcaataccgt acccaatacc
     5161 aacagcaccg agccgagata gaccaaaagc gcacccgggg aacgggtcat ctgcaaaccc
     5221 gacgaacgca cctcggaaaa cccatcaagt tgcagcagca taggcgcggg atattcggtc
     5281 aaacccgtgt acgcatccat actgtgcagc aggaaacgat tccgcgcttc atcctgctgc
     5341 cattcgggca agccgtaccg gcgtatggtt tcatccaaag cagcgttcat cacgccgtaa
     5401 agcatttcgt agaaatagcc ctgcatctta tcctgctgct ctttcgggat attggacgta
     5461 ataaattcgt ccaatcccaa atagcctttt tgtgcaaaga tgttcagcgt gttttccgca
     5521 gccagcatga attgttcgcg gatttcggca ggtgcgcctt tggttgcgtc ggcaaccaga
     5581 cgtttgcgcc cttccccatc tttcaaaaac tcacgcaatg ccataaaggt gtccgctttc
     5641 aactgcttgt ccaaggggat acgcagccag cggtattgct gctgcaagcc gctgcgcgtg
     5701 ccggtaatcc aaaaataatc ctgttcctgc aaaaccggca gcatatagtt tttatattcg
     5761 accgcctgcc ctgccgcatc acggatacgg taaacaatgg aagggccgat attggtgtat
     5821 tttttacctt cctgagtaac ggcgcggaca tcgttcagcg tggatttcag gcttttttcc
     5881 cgttccgcgc cctcgctcat gtcctccaca ttcatagaag taaactgatc gaactcaaga
     5941 cgatatttgt gtttgccaat ttccaacgga aactggtgta tggatgttgc cttcaacacg
     6001 acaggctcgc gcgaagcatc acccaaattc cacgccttga atgtcaaatc cgaaccgccg
     6061 tcggcaaaac tcgcctgata aatcgtgatg ccgtgcaagg tcaaaggatg gttcacgcgg
     6121 atggtgcgct cgagtttctc accggttgcc ttatccgtta cttcaatatc actggcaaaa
     6181 tcgcgcggca tacccgtatt gtaaaaatcg atatggaatt ttttcagttt gacttcaaaa
     6241 ggcaagtcct gaaccaatat cccgttgtcg gcattcagga aaaccacatc cgcactctgc
     6301 ccctcggaaa tattgacgtt gcccctaaat gagagattgg acgcacccaa aatactttcg
     6361 ggcttgaaat ccttggcata aaccgcctga ttgtccggaa caatccgacc ggtcagcata
     6421 cccagtttca acagcaggtt actgtctatc aacccgccca ggcaaatgac aatcaaagca
     6481 acatgggcaa agatatagcc ccatttgttc attgtgcctt ttttggcggc aatcagaacc
     6541 gacccgtctt cacggttaat ggtttttccc tgaaaacctt gtacttccag ataacgtttg
     6601 gcaacctcgg gcgcaatgtt tacatccaac agcgaagaat ggcgcatcgc cgccagagat
     6661 ttttctttaa ccttttcccg aaaagacttc atttcgcgcc agaacggcgg cacattgcga
     6721 atcaggcaca aactggtaga aaccaccaaa aacatcatga taacgacaaa ccatgccgaa
     6781 gcatagacgt catacagtcc cagaaaacca aaaatctgcg cccaaaacga tccgaatttg
     6841 accaaataat ccgtctgcgg ctggttttgc tgcaacaccg taccgataac cgatgcaata
     6901 cccagcagac tgagcaaagc gactgcaaag cgcatggagc tgaaaaaagc gaaccacgga
     6961 cgggaaagaa gtgggggaga tctacgggat ttactcattg tgtgtttatt ccgccatcag
     7021 gaatatggga aagcagaatt gggcaaacag aaaacaacgt cccgattcta ctgtcttgat
     7081 gctttttatt tcaagacaat gaagacagcc tgcatcgatt ccaacggttg cgattgaaaa
     7141 aacttatcgc agaattgcct gaagccgtct gaaaactttt cagacggcct ctaaaacaga
     7201 ctattgcgga attaacgcaa accttggata aagttggcga ccgctttcaa atcttcttca
     7261 gacatacggt ttgcaatatc ttccatgatg gtatttttac gctgaccgga cttgtaggca
     7321 ttcatctgtt caacaatata tgcctgatgc tgaccgccca aacgcggata agcctgaatt
     7381 tcgcttccgc ctcccggcat acccgcaccg ctcggaccgt ggcaggacat acacgccggc
     7441 acttttttat cgctcaaacc gccgcgatag attttcgcac ccaattcggg attttcctta
     7501 ggattggctt caccggattt gggctgctgt ttggcataga atgcggatac gttcaaaata
     7561 tcctgatcgc tcaaattcat taccaccggt ttcatcacag ctgccgaacc gtgggtgcgt
     7621 ttaccgtcgc ggatgccgat agtttgatga tagatgtaag cagtatgctg tgccgccaaa
     7681 cgcggataca tcgcaatgcc gctgttaccg tctgctgcat ggcaagccgc acaaaccgtt
     7741 gcggcaacct gtttgccttt ttccacgtct gctttgggag aggcggaaac cgcaccggca
     7801 gccaaaacaa aggccaataa agtcaatcgt ttcatggagt gctcctgatt acagcattgg
     7861 ataacgcaac aatgctcttt ttatattcaa atacgggatt tttgacccga ttaaaaccga
     7921 tgattctgta aacgtgttat tctatactaa atttacatta aattaccact gtgtttcaca
     7981 taaaaccaac cgcatatttt tgctgtcgga caaacggcgg cggaaaacaa ggatatgccc
     8041 atgaaccttt ttcaaaacgc caaattcttc acgacggtca accaccttaa agacctgccc
     8101 gacacccctc tcgaaattgc ctttgtcggc aggagcaatg ccggaaaatc cagtgccatc
     8161 aataccctga ccaaccatgt ccgtcttgcc tacgtttcaa aaacacccgg acggacgcag
     8221 catatcaact tcttcgagct gcagaacggc aattttatgg tcgatttgcc cggctacggt
     8281 tatgcccaag tccctgaagc agtacgcgca cattgggtca atctgctcgg cgactatctg
     8341 caacagcgca aacagcttat cgggctggtt ttgattatgg atgcccgcca tcctttaaaa
     8401 gaactcgaca tccgtatgct ggattttttc cacacgaccg gcagaccggt tcacatcctg
     8461 ctgtcaaaag ccgacaaatt atccaaaaac gaacagataa aaaccctgtc ccaagtcaaa
     8521 aaactgctca aaccttattc cgacaggcaa aacatcagcg tacagctgtt ttccagcctg
     8581 aaaaaacaag gtattgacga ggccaaccga actgtcggaa gctggtttga cgcagcagat
     8641 gccgccgctt cctctccaga ggaaaactga ccccaattat acggaaaccg tatttccccc
     8701 acttgaccga ccgcaaacat ttaaaaaatt gccactgcca aatctaaaat gccgtctgaa
     8761 agacttttca gacggcattt tgcggagtct ttaaaacaga gaatccaact gctgctgttt
     8821 ggaaccagta ttactcggaa gcaccggcgt ttcctgcata tcttggcgga cttcgtcatc
     8881 cgccgcctgc cgtccgcctt ctgccgcgcc cccgtcatct tcttttgccc gtcgggaagg
     8941 ttgcggcgca ataccgctgt tgtccagcgt caagcccgga tcggttacca tacgttcctt
     9001 catatagtat tcgccattgc tgctgaccac accttcaggc attttcatcc ccttgccctg
     9061 ctttcctttc aacgcaaaac gcatatagtc cacccaaacc ggcaccgcaa tcgtaccgcc
     9121 gtagccgaca cgccccatac tcttaggttt gtcgaagccg atatatacgg cagtaaccac
     9181 atcagggtta aaaccgacaa accacgcatc cttattgtca ttggtcgtac ccgttttacc
     9241 ggcaatatcc gttcttccca acgcagctgc cccccttgcc gtaccaacac ggaccacatc
     9301 ctgcataatc ttatacataa tataggcatt gcgcggatcg attgcctgag gcgcattttg
     9361 cccggccacc aaaggttgca tttgggcgcg caacctgccg tctctgtcat aaatcttatc
     9421 gattacgtgc gaagaaaccc tatatccgcc gttcgcaaat acgctatatg cctccgccac
     9481 tttcaacggc gttgtctcgc ccgtacctaa agccatagac aggcttgccg gcagctcgga
     9541 cgacctgaag ccgaaacgcc ggatatactg ttgcgcgtaa ccgacaccga tagacatcaa
     9601 aatacggatg gaaaccatat tcttggaagc cgtcagagcc tgtctcaaag taatgtagcc
     9661 ggaatatctg ccgtctgaat ttttaggtgt ccaaaccgaa ccgttcggcc ctttccccgg
     9721 cagggaaatc ggcgcatcgt taaccactgt ggacgcggtc atccccttag ataatgccgc
     9781 cgaatagaca aacggcttaa aggtcgaacc cggctgccgc attgcctgaa cggcacgatt
     9841 gaatgttttg ctgtgaaaat cataaccgcc gaccagcgcg cgcacagctc cggtttttgc
     9901 atccagcgaa accaaagccc cctgcagcaa cggctcttga accaccgccc aacgcccgcc
     9961 gttgtttttg acacggatga ccgcgcccct gcggatacgg tcctccccca ttttttcatt
    10021 attgaccgcg cgggccgcaa aacccaaggc gcgcctgtca agcgtaaccc gcctgccgcc
    10081 gggcagctgt atgacgacat ttttcttttt agtcacatcc aacacaacgg cgggaaccat
    10141 tttatcgacg gtatagagtc ccgacagata ctggctgaca gtctcctcga catcttcact
    10201 cttactcaaa tcgatatagt tttccgcacc gcggtagctg ctgccgcgat cgaaattccg
    10261 tagagccttg cgcaatgcct cggttgccac cttctgatga tcagcgcgga ccgtggtata
    10321 aaccttaaaa ccctgcgtat aggcatcttc accgtatttc tcatacagtt cctgacgcac
    10381 catttccgcc acatataaag cactctgatc gattttccga acaaaccgct cgtaatgcag
    10441 ttcctcattc aacgcctgat cgcgctgttg cacggtaatc atcttctcct cgagcatatt
    10501 gttcaaaata tacttctggc gcaacttggc acgttctgga ttaacaatcg gattataggc
    10561 agacggagcc ttgggcagtc ccgcaagcat ggcggcttcc gccaaagtca aatctcggac
    10621 attcttattg aaatagattt gcgcggcaga tgcaaaacca taggcgcgct gaccgaggta
    10681 aatctgattg aaatacaact cgaggatttt gtctttgctt aaagactgct cgattttata
    10741 ggcaagcaac acctcattga atttgcgtgt gaacgttttt tcactgctca aataaaaatt
    10801 tttcgccacc tgctgcgtaa tcgtactcgc acccgactgc acgctgccgg acacgacatt
    10861 gccgacggca gcgcgggcaa caccccaaac atccaccccc caatgccggt aaaagcgttt
    10921 atcctcggcg gcgataaccg cattccgcaa cacctttggg aaatcgccga tttttgtaaa
    10981 ttcgcgccgc tgctccccat acataccgat gacttcccca tccgccgaat aaatagtcaa
    11041 cggcatttta ggctggtaat gctgcaaaga atccaaagac ggtagtttcg gatacgttac
    11101 caaaatagca atggcaacca aacccactcc aaatacacaa aacccaaaaa ccaaaccaaa
    11161 acaagtcgtt aaaatctttt taatcatagc tgaataataa tttaccatta ttggtattaa
    11221 ataaagtaaa atagcaaccg atttctacaa agcacggttt caatgtgcaa agaacaagga
    11281 atccattacg gataccgaaa cggttactca ctgtacaaat aaagcaggaa ctttcatcat
    11341 gcgcttgttt aaaagcttga aaaaccctaa aaaaacagat gccaagctcc ctaaaaaatc
    11401 ttcgggactc aataaccgcg cggcaatcgg catcgatatc gaccagcatt ccatcaaaat
    11461 ggtccaattg tcaggacgta gtttaaacca aattcaattg gaaaaatacg tcattgccaa
    11521 attaccaaag aatatcattc aaggcaataa agtccaaaat tacgatcaac ttgttacata
    11581 tttgcaacaa gcctatgcca aactgggtac ttcgtgcaaa aacatcatcg cgtccgtccc
    11641 gcaaaatctg gcaaccatcg aacaattgac ctacacagac aaagatgcag aattagacct
    11701 gcaggggttc gtggagtcct ccatctccga agtcagctcg atatcgctcg aagaagccaa
    11761 ttacgactat caggtcttgt cccaatcggc cgccggcgaa gctgtgttgg ccgtcgcatc
    11821 gagaaaggat gaaatcgaac ccctgattga cgcattcaac gccgccggta tgaaattatc
    11881 cgcgcttgat gtggacattt tcggacaata caacgcctac gcgctatgga taaaccattt
    11941 cgcccccgag cttgcagccg aaaaagtcgc cattttcggc gtatatgccg cacagaccta
    12001 cgccttggtc atccaagacg gaaaaatcct atacaaacag gaaacctccg tcagcgaaga
    12061 acagctcaac caactcatcc agagcaccta tcaggtaaca gaagaaaaag cggaagaaat
    12121 catcaactcc ccgcaaaaac cttccgatta ccaagaaagc gtggcaaact atttcaacca
    12181 gcagattacc caagaaatac aaagggtctt gcagttttat tacaccacgc agaccgcaga
    12241 cgatatgacc gacatcaagc atatcctgct gaccggggaa gcggcgcgcc aggaaggtat
    12301 cgcccaaacc gtcgcctcac aaaccaatgc agatgtacaa tgcgtccatc ccgcgcgtta
    12361 ttttgcggac aacctcaaaa cagacaaaca acaattcgaa cttgatgcgc cgacactgac
    12421 cagggcgttc ggtttggcgg tacggggatt ataattatga acaatttaat caaaatcaac
    12481 ctcctcccct acagggaaga gatgaacaag cgcaaacagc agcagtttaa aacgctgatg
    12541 tacggtgccg tgctgacggg cgttgccgcc gttgcggcaa cctacctgtt tatcgacaat
    12601 atgatcaata accagtcgga aagaaacacg ctgctggaaa cctccatcgc acacttggat
    12661 accgagctgt cggaaataca aaagctcaaa caggaaaaag atgccttcct gattaaggaa
    12721 aacaaaatcg aggagctcca gctcaaacgc ctccaagccg caaaaatcct cgacagcctg
    12781 aatgaggccg tccccggaag cacctacctg acctcgctgg atgccgttac cgccgactct
    12841 tatcggctca gcggcaggac atccagcgac aaccgcgttg ccgccatgat gagggcgatg
    12901 cccaataccg gcatattcaa gcaacccgaa ttgttaagca tcaagaaaaa caattcgcat
    12961 caagaattta cccttcaggc aacattacaa cccatcgtaa aggcggccga atccaaagag
    13021 aatccggctt cgggaaacgc acaggaggca aactgaatgg cttctaaatc atctaaaacc
    13081 aacttggatc tcaacaacct tcacctgctc aaccttcctg ccaggctttt tatcgccctg
    13141 ctggccgttg ccgccgtgct ggggctcggt tatgccggat tgttcaaaag ccagatggaa
    13201 tcccttgagg aatacgaagc aaaagaaacc gaactgaaaa acacctacaa acagaaaagt
    13261 atcgacgcgg ccagcctgaa caacctgagg gacgaacttg cctcaatccg ctctgccttc
    13321 gatatcatgt tgaaacagct gccgacagat gcagaaattc ccaatctggt tcaagagctt
    13381 catcaggcag gttcgagcaa cggcctgcgc ttggacagcg ttatgcccca acctcccgta
    13441 gatgacggcc ccatcaaaag attaccctat tccatttcca ttaccggaaa ttacgaacag
    13501 atcagccaat ttacccgcga tgtcggcagc ctctcccgaa tcattaccct tgagtcgctg
    13561 aaaatcgccc aatctccgga aaacggcggc aatcctgacg gcaagagcag catcctgaac
    13621 ctcagcgcca ttgccaccac ctaccaagca aaatccgtag aagagcttgc cgcagaagcg
    13681 gcacaaaatg ccgagcaaaa ataacttacg ttagggaaac catgaaacac tatgccttac
    13741 tcatcagctt tttggctctc tccgcgtgtt cccaaggttc tgaggaccta aacgaatgga
    13801 tggcacaaac gcgacgcgaa gccaaagcag aaatcatacc tttccaagca cctaccctgc
    13861 cggttgcgcc ggtatacagc ccgccgcagc ttacagggcc gaacgcattc gacttccgcc
    13921 gcatggaaac cgacaaaaaa ggggaaaatg cccccgacac caagcgtatt aaagaaacgc
    13981 tggaaaaatt cagtttggaa aatatgcgtt atgtcggcat tttgaagtct ggacagaaag
    14041 tctccggctt catcgaggct gaaggttatg tctacactgt cggtgtcggc aactatttgg
    14101 gacaaaacta cggtagaatc gaaagcatta ccgacgacag catcgtcctg aacgagctaa
    14161 tagaagacag cacgggcaac tgggtttccc gtaaagcaga actgctgttg aattcttccg
    14221 acaaaaacac cgaacaagcg gcagcacctg ccgcagaaca aaattaagaa gaggattact
    14281 ccattatgaa taccaaactg acaaaaatca tttccggtct ctttgtcgca accgccgcct
    14341 ttcagacagc atcggcagga aacattacag acatcaaagt ttcctccctg cccaacaaac
    14401 agaaaatcgt caaagtcagc tttgacaaag agattgtcaa cccgaccggc ttcgtaacct
    14461 cctcaccggc ccgcatcgcc ttggactttg aacaaaccgg catttccatg gatcaacagg
    14521 tactcgaata tgccgatcct ctgttgagca aaatcagtgc cgcacaaaac agcagccgtg
    14581 cgcgtctggt tctgaatctg aacaaaccgg gccaatacaa taccgaagta cgcgggaaca
    14641 aagtttggat attcattaac gaatcggacg ataccgtgtc cgcccccgca cgccccgccg
    14701 taaaagccgc gcctgccgca ccggcaaaac aacaggctgc cgcaccgtct accaagtccg
    14761 cagtatccgt atccgaaccc tttaccccgg caaaacaaca ggctgccgca ccgtttaccg
    14821 agtccgtagt atccgtatcc gcaccgttca gcccggcaaa acaacaggcg gcggcatcag
    14881 caaaacaaca ggcggcagca ccagcaaaac aaaccaatat cgatttccgc aaagacggca
    14941 aaaatgccgg cattatcgaa ttggctgcat tgggctttgc cgggcagccc gacatcagcc
    15001 aacagcacga ccacatcatc gttacgctga aaaaccatac cctgccgacc acgctccaac
    15061 gcagtttgga tgtggcagac tttaaaacac cggttcaaaa ggttacgctg aaacgcctca
    15121 ataacgacac ccagctgatt atcacaacag ccggcaactg ggaactcgtc aacaaatccg
    15181 ccgcgcccgg atactttacc ttccaagtcc tgccgaaaaa acaaaacctc gagtcaggcg
    15241 gcgtgaacaa tgcgcccaaa accttcacag gccggaaaat ctcccttgac ttccaagatg
    15301 tcgaaatccg caccatcctg cagattttgg caaaagaatc cggaatgaac attgttgcca
    15361 gcgactccgt caacggcaaa atgaccctct ccctcaagga tgtgccttgg gatcaggctt
    15421 tggatttggt tatgcaggcg cgcaacctcg atatgcgcca gcaagggaat atcgtcaaca
    15481 tcgcgccccg cgacgagctg cttgccaaag acaaagccct cttacaggca gaaaaagaca
    15541 ttgccgattt gggtgcgctg tattcccaaa acttccagtt gaaatacaaa aatgtggaag
    15601 aattccgcag catcctgcgt ttggacaatg ccgacacgac cggaaaccgc aacacgctta
    15661 tcagcggcag gggcagcgtg ctgatcgatc ccgccaccaa caccctgatt gttaccgaca
    15721 cccgcagcgt catcgaaaaa ttccgcaaac tgattgacga attggacgta cccgcgcaac
    15781 aagtgatgat tgaggcgcgt atcgtcgaag cggcagacgg cttctcgcgc gatttgggcg
    15841 ttaaattcgg cgcgacaggc aagaaaaagc tgaaaaatga tacaagcgca ttcggctggg
    15901 gggtaaactc cggcttcggc ggcgacgata aatggggggc cgaaaccaaa atcaacctgc
    15961 cgattaccgc tgccgcaaac agcatttcgc tggtgcgcgc gatttcctcc ggtgccttga
    16021 atttggaatt gtccgcatcc gaatcgcttt caaaaaccaa aacgcttgcc aatccgcgcg
    16081 tgctgaccca aaaccgcaaa gaggccaaaa tcgaatccgg ttacgaaatt cctttcaccg
    16141 taacctcaat cgcgaacggc ggcagcagca cgaacacgga actcaaaaaa gccgtcttgg
    16201 ggctgaccgt tacgccgaac atcacgcccg acggccaaat cattatgacc gtcaaaatca
    16261 acaaggactc gcctgcgcaa tgtgcctccg gtaatcagac gatcctgtgt atttcgacca
    16321 aaaacctgaa tacgcaggct atggttgaaa acggcggcac attgattgtc ggcggtattt
    16381 atgaagaaga caacggcaat acgctgacca aagtccccct gttgggcgac atccccgtta
    16441 tcggcaacct ctttaaaaca cgcgggaaaa aaaccgaccg ccgcgaactg ctgattttca
    16501 ttaccccgag gattatgggt acggccggca acagcctgcg ctattgatgc gtcaaaataa
    16561 gggcatatgt tttacggcat atgccctttc tttatgcttt ttgccgcgac cgaaatgccg
    16621 tcattcccgc gcaggcagaa atccaacttg tccggttccg gttgtttttc gtctcgtaac
    16681 ttttgagccg tcattcccgc gcaggcagaa atccagtccg ttcagtttcg gtcatttccg
    16741 ataaattcct gttgcttttc atttctggat tcccacttt
//
LOCUS       DAWEYF010000028        16654 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.028, whole genome shotgun sequence.
ACCESSION   DAWEYF010000028 DAWEYF010000000
VERSION     DAWEYF010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16654
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.028"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..516
                     /locus_tag="WGN93_000672"
     CDS             <1..516
                     /locus_tag="WGN93_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ0226607.1"
                     /translation="RGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLD
                     EGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFA
                     NYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRT
                     VGAGVVSSVIA"
     gene            523..598
                     /locus_tag="WGN93_000673"
     tRNA            523..598
                     /locus_tag="WGN93_000673"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:556..558,aa:Trp,seq:cca)
     gene            713..991
                     /gene="secE"
                     /locus_tag="WGN93_000674"
     CDS             713..991
                     /gene="secE"
                     /locus_tag="WGN93_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ0226608.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            993..1529
                     /gene="nusG"
                     /locus_tag="WGN93_000675"
     CDS             993..1529
                     /gene="nusG"
                     /locus_tag="WGN93_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ0226609.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1630..2064
                     /gene="rplK"
                     /locus_tag="WGN93_000676"
     CDS             1630..2064
                     /gene="rplK"
                     /locus_tag="WGN93_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ0226610.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            2064..2759
                     /gene="rplA"
                     /locus_tag="WGN93_000677"
     CDS             2064..2759
                     /gene="rplA"
                     /locus_tag="WGN93_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ0226611.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2989..3489
                     /gene="rplJ"
                     /locus_tag="WGN93_000678"
     CDS             2989..3489
                     /gene="rplJ"
                     /locus_tag="WGN93_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ0226612.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3547..3918
                     /gene="rplL"
                     /locus_tag="WGN93_000679"
     CDS             3547..3918
                     /gene="rplL"
                     /locus_tag="WGN93_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ0226613.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            4108..8286
                     /gene="rpoB"
                     /locus_tag="WGN93_000680"
     CDS             4108..8286
                     /gene="rpoB"
                     /locus_tag="WGN93_000680"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ0226614.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YGNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVVRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            8438..12613
                     /gene="rpoC"
                     /locus_tag="WGN93_000681"
     CDS             8438..12613
                     /gene="rpoC"
                     /locus_tag="WGN93_000681"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ0226615.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12904..13161
                     /locus_tag="WGN93_000682"
     CDS             12904..13161
                     /locus_tag="WGN93_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226616.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRIGMPINIG"
     gene            13158..13307
                     /locus_tag="WGN93_000683"
     CDS             13158..13307
                     /locus_tag="WGN93_000683"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ0226617.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKISSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            13486..13857
                     /gene="rpsL"
                     /locus_tag="WGN93_000684"
     CDS             13486..13857
                     /gene="rpsL"
                     /locus_tag="WGN93_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ0226618.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13975..14445
                     /gene="rpsG"
                     /locus_tag="WGN93_000685"
     CDS             13975..14445
                     /gene="rpsG"
                     /locus_tag="WGN93_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ0226619.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            14464..16569
                     /gene="fusA"
                     /locus_tag="WGN93_000686"
     CDS             14464..16569
                     /gene="fusA"
                     /locus_tag="WGN93_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ0226620.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4405 a         3724 c         4344 g         4181 t
ORIGIN      
        1 cgtggtacag tagtaaccgg ccgtgtagag cgcggtatca tccacgttgg tgacgagatt
       61 gaaatcgtcg gtctgaaaga aacccaaaaa accacttgta ccggtgttga aatgttccgc
      121 aaactgctgg acgaaggtca ggcgggcgac aacgtaggcg tattgctgcg cggtaccaaa
      181 cgtgaagacg tggaacgcgg tcaggtattg gctaaaccgg gtactatcac tcctcacacc
      241 aagttcaaag cagaagtata cgtactgagc aaagaagagg gcggccgcca taccccgttc
      301 ttcgccaact accgtcccca attctacttc cgtaccaccg acgtaaccgg cgcggttact
      361 ttggaagaag gtgtggaaat ggtaatgccg ggcgagaacg taaccatcac cgtagaactg
      421 attgcgccta tcgctatgga agaaggtttg cgctttgcga ttcgcgaagg cggtcgtacc
      481 gtgggtgccg gcgtggtttc ttctgttatc gcttaagttt agaggccaat agctcaattg
      541 gtagagtatc ggtctccaaa accgagggtt gggggttcga gaccctcttg gcctgccaaa
      601 taaaaaatta accggccttg tgtcggttaa tttttttgta tttgttattt agtaaactct
      661 cttgccattt acatggattg agaatagaca gatgctatga tggataaata atatgacaga
      721 acatacgcct gaaaaaaaga acgttaaagt ggatcaactg gttgttcaag ataaagaatc
      781 tgcatctaat tccggtaagg aagggttttt tgcatatttc tcaaattctt ggtccgaatt
      841 caaaaaggtg gtttggccta agcgtgaaga tgctgtcaga atgactgtat ttgttatagt
      901 gtttgttgct gtgctttcta tatttatcta tgcggcagat acagcaattt cgtggttatt
      961 ttttgatgta ttgctgagaa gggaaggttg agatgtcgaa aaaatggtat gttgtacagg
     1021 cgtattcggg gtttgagaag aatgtccaac gaatattgga agagcgcatt gcccgtgagg
     1081 agatgggaga ttatttcgga caaattctgg tgcctgtaga gaaagttgtt gatatccgca
     1141 atggtcgtaa gactattagt gaaagaaagt catatcctgg ttatgtgcta gttgagatgg
     1201 aaatgacaga tgactcttgg catcttgtaa aaagcacccc ccgtgtttcc ggttttattg
     1261 gagggagggc taatagacct acgccgatta gtcagagaga ggctgaaatt attttacagc
     1321 aggttcagac cggcatagag aagccgaaac caaaagttga atttgaggtc ggtcaacagg
     1381 ttcgtgtaaa tgaagggccg tttgcggatt ttaacggggt ggttgaggag gtcaattatg
     1441 aacggaataa gttacgcgtg tctgttcaga tatttggtag agaaacaccc gttgagctgg
     1501 agttcagcca ggttgaaaag attaactgat ttttatactt gaaaaaaaag caataagagg
     1561 atagaatcaa aaattaactt ggggagcgga aatggttccg cgtcttaccc gtttttagga
     1621 gttcgttaag tggcaaagaa aattatcggc tatattaaac tgcaaattcc tgcaggtaaa
     1681 gccaatccat ctcctccggt tggtcctgct ttgggtcagc gcggtttgaa tattatggaa
     1741 ttttgtaagg catttaatgc tgcaacccaa ggtatggagc ctggcttacc gattccggtt
     1801 gtgattactg catttgcaga taaatcattc acatttgtga tgaaaacccc gccagcttct
     1861 atcttgttga aaaaggctgc cggtttgcaa aaaggtagtt ctaatcctct gaccaacaaa
     1921 gtgggtaaat tgacccgtgc ccagttggaa gaaattgcta aaactaaaga tcctgatttg
     1981 actgctgctg acttggatgc ggctgtccgt actatagcag gttctgctcg ctcaatgggc
     2041 ttggatgtgg agggtgttgt ataatggcta aagtatctaa acgcttgaaa gctcttcgct
     2101 cttctgtgga agccaataaa ttatatgcaa ttgatgaagc aattgctttg gtaaaaaaag
     2161 cagcgactgc taaatttgac gagtctgttg acgtatcttt caacttgggc gttgatccgc
     2221 gtaaatctga ccaagttatc cgtggttcgg tcgttctgcc taaaggcacc ggtaagataa
     2281 cccgtgtggc tgtatttact caaggtgcaa atgcagaagc tgctaaagaa gctggtgcag
     2341 atatcgtcgg tttcgaagat ttggctgctg aaatcaaagc aggcaatctg aactttgacg
     2401 ttgttattgc ttctcccgat gcaatgcgta ttgttggtca attgggtacc atcttgggtc
     2461 ctcgtggtct gatgccaaac cctaaagtag gtacggttac ccctaatgtt gccgaagcag
     2521 taaaaaatgc aaaagcaggt caagtgcagt accgtaccga caaggcaggt attgttcatg
     2581 caacgattgg tcgtgcttca ttcgctgaag ctgatttgaa agagaacttt gatgcgttgc
     2641 tggatgctat cgttaaagcc aagcctgctg ccgctaaagg tcagtatctg aaaaaagttg
     2701 ctgtgtctag caccatgggt ttgggtattc gcgttgatac atcaagcgta aataactaat
     2761 cttaaggaat tttcaagcag tttggttttc tgggctgctt gaatttgggc tacttaaaat
     2821 taagtagatg tccaagaccg tagggatcgt aagatttaat cgtaactgcc ctacgcagac
     2881 ggtagtcctg aaacacattg caagattgct tgtaagatgt ctttttaggt taccgcgctg
     2941 gtgggatatc gttttggtat cctgtttata aacagtggga ggtagacctt gagtctcaat
     3001 attgaaacca agaaagtggc ggtcgaggaa attagcgcgg caattgctaa cgctcaaacc
     3061 ctcgtagtcg ctgaatatcg cggtatcagt gtttccagta tgactgagct tcgtgcgaat
     3121 gcacgtaaag aaggcgttta tttgcgtgtt ctgaaaaata ctttggctcg tcgtgcagtg
     3181 caaggtactt catttgcaga attggccgat caaatggttg gtccgttggt ttacgctgct
     3241 tctgaagatg ctgttgctgc tgctaaagtg ttgcaccaat tcgcgaaaaa agatgacaaa
     3301 attgtcgtta aagccggttc ttacaatggc gaagtaatga atgctgctca ggttgctgag
     3361 ttggcttcta ttccgagccg cgaagagctg ttgtccaaac tgttgttcgt tatgcaagct
     3421 cctgtatcgg gctttgcgcg cggtttggct gctttggcag agaaaaaagc cggcgaagaa
     3481 gccgcttaat cgattttgtt tctgttaatc aattattttt taatacaata tttggagtaa
     3541 aatagcatgg ctattactaa agaagacatt ttggaagcag ttggttcttt gaccgtaatg
     3601 gaattgaacg acttggttaa agcttttgaa gaaaaattcg gtgtttctgc tgctgctgtt
     3661 gcagttgcag gtcctgctgg tgccggtgct gccgatgctg aagaaaaaac cgaatttgat
     3721 gtcgttttgg cttctgccgg cgatcaaaaa gtcggcgtga ttaaagttgt ccgtgcaatt
     3781 accggtttgg gtctgaaaga agctaaagac atcgttgacg gcgcacctaa aaccattaaa
     3841 gagggtgttt ctaaagctga agccgaagac atccaaaaac aactggaaga agcaggcgct
     3901 aaagtcgaaa tcaaataatt tgatgcttct tatggaggct ggcagttttc tgccagcctt
     3961 attttgcttc ttaaaataaa catcaagtat tgtttacatt tatttgcata gtttttatca
     4021 agtcattgca aataaatgta aatatcagat tgatgcgtac cgttgtttca gacggcctat
     4081 tattgaaaat tacttttcgg agtgtgtatg aactattcgt ttaccgagaa aaaacgtatc
     4141 cgtaagagtt ttgcaaagcg ggaaaatgtt ttggaagttc ctttcttgct agcaacccaa
     4201 attgattctt atgcgaagtt tttgcagctg gaaaatgctt ttgacaaacg taccgatgac
     4261 ggtctgcagg cagcatttaa ttctattttc ccgattgtga gccataacgg ttatgcgcga
     4321 ttggagtttg tgcattacac attgggcgag cctttgttcg atattcccga atgtcagttg
     4381 cgcggaatca cttatgcagc ccccttgcgc gcgcgtatcc gtttggtgat tttggataag
     4441 gaagcatcta aaccgacggt aaaagaagtt cgtgaaaacg aagtgtatat gggcgaaatt
     4501 ccgttgatga ccccgagcgg ttcttttgtg attaacggca cagagcgtgt gattgtctcc
     4561 cagttgcacc gttcgcccgg cgtattcttc gagcatgaca aaggtaagac gcactcttcc
     4621 ggcaagttgt tattctccgc ccgtatcatt ccctaccgcg gttcatggtt ggattttgaa
     4681 tttgacccga aagatttgct gtatttccgt atcgaccgcc gccgtaaaat gccggtaacg
     4741 attttgttga aggctttggg ctacggcaat gagcaaatct tggatatttt ctacgacaaa
     4801 gaaacgttct atttgtcttc aaacggtgtt caaaccgatt tggtcgcagg ccgtctgaaa
     4861 ggcgaaactg ccaaggtcga tatcttggat aaagaaggca atgtattggt tgccaaaggt
     4921 aagcgcatta ctgcgaaaaa tatccgtgat attaccaatg caggcctgac ccgtttggat
     4981 gtagaaccgg aaagcctgct gggtaaagca ttggctgccg atctgattga ttcggaaacc
     5041 ggcgaggtat tggcttctgc caatgatgaa attacagaag agttgttggc caaatttgat
     5101 atcaacggcg taaaagaaat tacgaccctt tacatcaatg agttggatca gggtgcttat
     5161 atctccaaca ccttgcgtac ggatgagact gccggccggc aggcggcgcg tgttgcgatt
     5221 taccgtatga tgcgtccggg cgaaccgccc accgaagagg cggtcgagca attgtttaac
     5281 cgcttgttct tcagtgaaga cagctacgat ttgtcccgcg taggtcgtat gaaatttaat
     5341 acgcgcacat acgaacaaaa actgtccgaa gcccaacaaa actcttggta cggccgcctg
     5401 ctgaacgaaa cgtttgccgg tgctgccgac aaaggcggtt atgtcctgag cgtcgaagat
     5461 attgtcgcct cgattgcgac tttggtcgag ttgcgtaacg gccatggtga agttgacgat
     5521 atcgatcact tgggcaaccg ccgagtacgt tcggtaggcg agctgactga aaaccaattc
     5581 cgcagcggtt tggcccgtgt ggaacgtgct gtaaaagaac gtttgaatca ggcggaatca
     5641 gaaaacttga tgccgcacga tttgattaat gcaaaacctg tttctgccgc tattaaagaa
     5701 ttcttcggct ccagccaatt gagtcagttt atggatcaga ccaacccctt gtctgaagta
     5761 acccataaac gccgcgtatc cgcattgggt ccgggcggtt tgacccgcga acgtgccgga
     5821 tttgaggtgc gggacgtgca tccgacccac tacggccgcg tatgtccgat tgaaacgcct
     5881 gaaggtccga acatcggttt gatcaactca ctgtccgttt atgcgcgcac caatgattac
     5941 ggtttcttgg aaacgcctta ccgccgcgtt atcgacggca aagtaaccga ggaaatcgat
     6001 tacttgtctg ccatcgaaga aggccgctat gtgattgcac aggcgaatgc cgatttggat
     6061 tcagatggca atctgattgg cgatttggtt acctgtcgtg aaaaaggcga aaccattatg
     6121 gcaacgcccg accgcgtcca atatatggac gtggcaaccg gccaggtggt atccgttgcg
     6181 gcatccctga ttccgttctt ggaacatgat gacgcgaacc gcgcattgat gggtgccaac
     6241 atgcaacgtc aggcagtgcc ttgcttgcgt cctgaaaaac cgatggtcgg taccggtatc
     6301 gagcgttccg ttgccgttga ctctgctact gcaatcgttg cccgccgagg cggcgtggtc
     6361 gagtatgtcg atgccaaccg cgtcgtcgtt cgtgttcatg acgatgaagc gactgccggc
     6421 gaagtgggtg tcgatattta caacttggtt aaatttaccc gttccaatca atctactaac
     6481 atcaaccaac gtccggctgt caaagcaggc gatgttttgc aacgcggcga tttggtggcc
     6541 gatggcgcgt ccaccgattt gggcgaattg gctttgggtc aaaatatgac catcgccttc
     6601 atgccgtgga acggttacaa ctacgaagac tcgattctga tttccgaaaa agtggctgcg
     6661 gacgaccgct atacttcgat tcacattgag gaattgaatg tcgttgcccg cgataccaag
     6721 ctgggtgcgg aagacattac ccgcgatatt ccgaacttgt ccgagcgtat gcaaaaccgt
     6781 ttggacgaat ccggtatcgt ttacatcggt gcggaagtag aagccggcga tgtgttggta
     6841 ggcaaggtaa cgcctaaagg cgaaacccag ctgacgccgg aagaaaaact gctgcgcgcc
     6901 atcttcggtg aaaaagcatc tgacgtaaaa gatacttcat tgcgtatgcc taccggcatg
     6961 agcggtaccg ttatcgacgt tcaagtcttc actcgtgaag gtattcaacg cgacaaacgt
     7021 gctcaatcca ttatcgattc cgagttgaaa cgctaccgtt tggatttgaa cgaccaattg
     7081 cgtattttcg acaacgacgc attcgaccgt atcgagcgta tgattgtcgg tcagaaagcc
     7141 aacggcggcc cgatgaagct ggccaaaggc agtgaaatca cgaccgaata tctggcgggt
     7201 ctgccgagca ggcacgattg gttcgatatc cgtctgaccg atgaagattt ggccaagcag
     7261 ttggaactga ttaaagtgag cctgcaacaa aaacgcgaag aagcggacga gttatacgaa
     7321 atcaagaaga aaaaactgac ccaaggcgac gaattgcaac ccggcgtaca aaaaatggtg
     7381 aaagttttta tcgccatcaa acgccgtctg caagccggcg acaaaatggc gggccgccac
     7441 ggtaacaaag gcgtggtatc gcgcattctg ccagtggaag acatgcctta catggcggac
     7501 ggccgtccgg tagacatcgt actgaaccca ttgggcgtac cttcccgtat gaacatcggt
     7561 cagattttgg aagttcactt gggttgggca gcaaaaggta tcggcgagcg tatcgaccgt
     7621 atgctgaaag agcaacgcaa agcaggcgag ttgcgcgagt tcttgaacag actctacaac
     7681 ggcagcggta agaaagaaga tttggatgcc ctgactgatg aagaaatcat cgaactggcc
     7741 tccaacctgc gcaaaggtgc atctttcgcc tctcctgtat tcgacggtgc gaaagagtct
     7801 gaaatccgcg aaatgctgaa cttggcttat ccgagcgacg atcctgaggt tgaaaaactg
     7861 ggcttcaacg acagtaaaac ccaaatcacg ctgtatgacg gccgttcagg cgaagcattt
     7921 gaccgcaagg ttacagtagg tgtgatgcac tatctgaaac tgcaccactt ggttgacgaa
     7981 aaaatgcacg cccgttctac cggtccgtac agtctggtta cccagcagcc tttgggcggt
     8041 aaagcccagt tcggtggcca acgtttcggc gagatggagg tttgggcatt ggaagcatac
     8101 ggcgcggcat acacgctgca agagatgttg actgtgaagt ctgacgacgt gaacggtcgt
     8161 accaaaatgt acgaaaacat cgtcaaaggc gaacacaaaa tcgatgccgg tatgcccgag
     8221 tccttcaacg tattggtcaa agagattcgc tcactgggct tggatatcga tttggaacgc
     8281 tactgatacg ggtttcagac ggcataaggg gagctgttct gcaggtatgc ggggcagccg
     8341 acaatgttta aaaacgaaat gccgtctgaa aacactgtac ctctatccat atcgaaaatc
     8401 cgccatgcgg taaaaatact tccttcaagg agcaaaaatg aatttgttga acttatttaa
     8461 tccgttgcaa actgccggca tggaagaaga gtttgatgcc atcaaaatcg gtattgcctc
     8521 tcccgaaacc atccgctcat ggtcttatgg cgaagtcaaa aaacctgaaa ccatcaacta
     8581 ccgtacgttc aaacctgagc gtgacggttt gttctgtgcc aaaatctttg gcccggtcaa
     8641 agactacgaa tgcttgtgcg gaaaatacaa acgcttgaaa tttaaaggtg taacttgtga
     8701 aaaatgcggc gtggaagtaa ccctgtccaa agtgcgccgc gaacgcatgg gccatatcga
     8761 attggctgcg cccgtcgcac atatttggtt cttaaaatcc ctgccttccc gcttgggtat
     8821 ggtgttagac atgactttgc gcgatatcga acgcgtattg tactttgaag catttgtggt
     8881 aaccgatccc ggtatgactc cgctgcaacg ccgccaattg ctgactgaag acgattacta
     8941 caacaagctg gacgaatacg gcgacgattt cgatgccaaa atgggtgcgg aaggtatccg
     9001 cgaattgctg cgtaccctga atgtagcggg cgaaatcgaa atcctgcgcc aagagttgga
     9061 atcgaccggt tccgacacca aaatcaaaaa aatcgccaaa cgcttgaaag tattggaagc
     9121 tttccatcgt tccggtatga aactggaatg gatgattatg gatgtgctgc cggtattgcc
     9181 gcctgatttg cgtccgttgg ttccattgga tggtggtcgt tttgccactt ccgatttgaa
     9241 cgatttgtac cgccgcgtta ttaaccgtaa caaccgtctg aaacgtctgt tggaactgca
     9301 tgctcctgac atcatcgtcc gcaacgaaaa acgtatgttg caagaagcag ttgactcgct
     9361 gttggataac ggccgtcgcg gtaaagccat gaccggcgcc aacaaacgcc cgctgaaatc
     9421 attggcagac atgattaaag gtaagggtgg ccgcttccgt caaaacctgc tgggcaaacg
     9481 tgtggactac tccggccgtt ccgtgattac cgtaggcccg tacctgcgtc tgcaccaatg
     9541 cggtttgccg aaaaaaatgg ctttggaact gttcaaaccg ttcattttcc acaaattgga
     9601 aaaacaaggt ttggcctcta ccgttaaagc agcgaaaaaa ttggtagagc aagaagtacc
     9661 ggaagtatgg gacatcttgg aagaagtcat ccgcgaacat ccgattatgc tgaaccgtgc
     9721 gccgaccctg caccgtttgg gtattcaagc gttcgaacct atcttgattg aaggtaaagc
     9781 gattcagttg cacccattgg tgtgtgctgc gttcaacgcc gactttgacg gcgaccaaat
     9841 ggcggtacac gttccattga gcttggaagc acaaatggaa gcacgcacgc tgatgctggc
     9901 ttcaaacaac gtattgtctc ctgccaacgg cgaaccgatt atcgtacctt cccaagacat
     9961 cgtattgggt ctgtactaca tgacccgcga ccgtatcaat gccaaaggcg agggcagcct
    10021 gtttgccgat gtgaaagaag tgcatcgcgc ataccatacc aaacaggttg aactgggtac
    10081 gaaaattacc gtacgtctgc gcgaatgggt gaaaaacgaa gcaggtgagt ttgagcctgt
    10141 cgttaaccgt tacgaaacaa ccgtcggccg tgcattgttg agcgaaatcc tgccgaaagg
    10201 cctgccgttt gaatatgtca acaaagcgtt gaagaaaaaa gaaatttcta aactgattaa
    10261 cgcatcgttc cgcctgtgcg gcttgcgcga tacggttatc tttgctgacc acctgatgta
    10321 caccggtttc ggatttgcgg caaaaggcgg tatttccatt gccgttgacg atatggaaat
    10381 tccaaaagaa aaagcggcct tgctggctga agccaatgcc gaggttaaag aaatcgaaga
    10441 ccaataccgt caaggtttgg ttaccaacgg cgaacgctac aacaaggtgg tcgatatttg
    10501 gggtcgtgcc ggcgataaaa tcgctaaagc gatgatggac aacctgtcca aacagaaagt
    10561 tatcgaccgt gccggcaacg aagtcgatca agagtcattc aactccatct atatgatggc
    10621 tgactccggt gcccgtggtt ctgcggctca gattaaacag ttgtccggta tgcgcggttt
    10681 gatggcgaaa cctgacggct cgattattga aacgccgatt acctcaaact tccgcgaagg
    10741 tctgaccgta ttgcaatact ttattgcgac ccacggtgcg cgtaagggtt tggcggatac
    10801 cgcattgaaa accgcgaact ccggttacct gacccgtcgt ctggtagacg taactcaaga
    10861 tttggtcgtt gttgaagacg attgcggtac ttcagacggc tttgtcatga aggcagtggt
    10921 acaaggcggt gatgtgattg aagcattgcg cgatcgtatt ttgggccgtg ttaccgcgtc
    10981 tgacgttgtc gatccgtcaa gtggcgaaac attggttgaa gcaggcacgt tgttgactga
    11041 aaaactggtg gatatgattg accaatccgg tgtcgatgaa gtcaaagtcc gtacgccgat
    11101 tacttgtaaa acccgtcacg gtttgtgcgc gcactgttac ggccgcgact tggcgcgcgg
    11161 caaactggtc aatgccggcg aggcagtcgg cgtgattgcc gctcagtcta tcggcgaacc
    11221 gggtacccag ttgaccatgc gcacgttcca catcggtggt gcggcatccc gtgcggcagc
    11281 agccagccaa gtggaagcca aatccaacgg tacggcacgt ttcagcagcc agatgcgtta
    11341 cgttgccaac aacaaaggtg agttggttgt catcggtcgc tcttgcgaag tcgtgattca
    11401 tgatgacatc ggccgtgaac gcgaacgcca caaagtacct tacggtgcca tcctgctggt
    11461 acaagacggt atggccatta aagccggtca aaccttggca acctgggatc cgcatacccg
    11521 tccgatgatc accgaacatg caggtatggt gaaatttgag aacgtggaag agggtgttac
    11581 cgttgcgaaa caaactgacg atgtaaccgg tttgtccact ttggtggtga ttgacggtaa
    11641 acgccgttcc agcagcgcgt ccaaactgct gcgtccgact gtaaaattgt tggatgaaaa
    11701 cggcgtggaa atctgtattc ccggtacgtc cactccggtt tcgatggcat tccccgttgg
    11761 tgcggtgatt accgtacgcg aaggtcagga aatcggtaaa ggcgacgtat tggcgcgtat
    11821 cccgcaagcc tcttccaaaa cccgcgacat taccggtggt ctgccgcgcg ttgccgaatt
    11881 gtttgaagca cgcgtgccga aagatgccgg tatgttggcg gaaattaccg gtaccgtttc
    11941 cttcggcaaa gagaccaaag gcaagcaacg tctgattgtt actgacgtgg acggtgtagc
    12001 atacgagacc ttgatttcca aagagaaaca aattctggta cacgacggtc aagtggtaaa
    12061 ccgcggtgaa accatcgtgg acggagctgt tgatccgcat gatattctgc gtttgcaagg
    12121 tatcgaagca ctggcacgct acattgtcca agaggtgcaa gaggtttacc gtctgcaagg
    12181 tgtgaagatt tctgataaac acatcgaagt catcatccgt caaatgttgc gccgtgtgaa
    12241 cattgcggat gccggcgaaa ccgggttcat taccggagag caggtcgaac gcggcgatgt
    12301 gatggcggcc aatgaaaaag ctttggaaga aggcaaagag ccggcacgtt acgaaaacgt
    12361 attgctgggt attaccaaag cctccctgtc caccgacagt ttcatttctg ccgcatcgtt
    12421 ccaagaaacg acccgtgttc tgaccgaagc cgcgattatg ggcaaacaag acgaactgcg
    12481 cggtttaaaa gagaacgtca tcgtcggccg cctgattcct gccggtaccg gtttgactta
    12541 tcaccgcagc cgtcatcagc aatggcaagg ggtagagcag gagactgctg aaacccaagt
    12601 aacggatgaa taatcttcgg cgcgtttatt caatacaaaa ccgcaagctt taagcttgcg
    12661 gtttttcttt gtccgattaa ggcaaaaaca agcgttttcg tcattttgag gcgtgtggat
    12721 tattccttag gtattttcgg gccggagacc aacgaggtgg cgggtgtcgt cggtacgtcc
    12781 ggagaccaaa ataactttgc caaggatgtt ggtttcggcg gtcaaaaaag tagcgtctta
    12841 atgttttcca tttaaacaaa tgtcgtctga aacttcagac ggcatttcct ttaagaaata
    12901 aatatgaaac ccagaaatct cttttttgca ggctgcctgc tgacttcggc gacgtttgcc
    12961 gaggatatcg gcgtacctgt cgaactgatt aacgtcggta atcggattgc gatgccgtct
    13021 gaaggggaaa gcctcgccct cctgccgttt gccgaggatg taccgccggt tcgcgatgca
    13081 atgccgtctg aagttcctaa aagcgcggca ggcggcgatg ttcggggtga ccggatagga
    13141 atgccgatta acatcggatg agcgcggctt tatggcataa aaaactgtcg tggaaaggat
    13201 ttacacccca aataaatttc cgttacaaca agatcagcag caatatgccc gccttttatt
    13261 cgcgcagcgg caaggaacgg tttgtcagta tagaaaaaac gtattgacag tattttcttc
    13321 agtcgtccga ctgattgtga gggatgtcgg taaatattta tcggcaaaca agaaaatcat
    13381 ctttcttctt gtcgttatgc ttgactgtat acttgcaata aaaatataat tccactcttg
    13441 ccgacatggt gtcggcaagt atttaactca acaggacgag aaaatatgcc aactatcaac
    13501 caattggtac gcaaaggccg tcaaaagccc gtgtacgtaa acaaagtgcc cgcactggaa
    13561 gcctgcccgc aaaaacgcgg cgtgtgcacc cgtgtataca cgactacccc taaaaaacct
    13621 aactctgcat tgcgtaaagt atgtaaagtc cgcctgacca acggttttga agtcatttca
    13681 tacatcggcg gcgaaggcca caacctgcaa gagcacagtg tcgtattgat tcgcggcggt
    13741 cgtgtaaaag acttgccagg tgtgcgttac cacactgtac gcggttcttt ggatactgca
    13801 ggcgttaaag accgtaaaca agcccgttcc aaatacggtg ctaagcgtcc taaataatta
    13861 ctgggactta aataggcacg tcggccgcct aagctgaaca acggccgagt aagtgaatac
    13921 tcaattgggt attcatggga atagacccga ctgaatagat taaaggaaat taaaatgcca
    13981 agacgtagag aagtccccaa gcgcgacgta ctgccagatc ctaaattcgg cagcgtcgag
    14041 ttgaccaaat tcatgaacgt attgatgatt gacggtaaaa aatccgttgc cgagcgtatc
    14101 gtttacggtg cgttggaaca gattgagaaa aaaaccggca aagtagcaat cgaagtattt
    14161 aacgaagcca ttgcaaacgc caaacctatc gtggaagtga aaagccgccg tgtaggtggt
    14221 gcaaactacc aagttcctgt tgaagttcgt ccttcacgcc gtttggcttt ggcaatgcgc
    14281 tgggttcgcg atgcggcccg caaacgtggt gagaaatcca tggacctgcg tttggcaggc
    14341 gaattgattg atgcgtccga aggccgtggc ggtgcgttga aaaaacgtga agaagtacac
    14401 cgtatggctg aagccaacaa agcattctct cacttccgtt tctaattttg aaaggctaat
    14461 aaaatggctc gtaagacccc gatcagcctg taccgtaaca tcggtatttc cgcccatatc
    14521 gatgcgggta aaaccacgac gacagaacgt attttgttct ataccggttt gacccacaag
    14581 ctgggcgaag tgcatgacgg tgcggctact accgactaca tggaacaaga gcaagagcgc
    14641 ggtattacca ttacctccgc tgccgttact tcctactggt ccggtatggc gaaacaattc
    14701 cccgagcacc gcttcaacat catcgacacc ccgggacacg ttgactttac cgtagaggta
    14761 gagcgttcta tgcgtgtatt ggacggcgcg gtaatggttt actgcgcggt gggcggtgtt
    14821 caaccccaat ctgaaaccgt atggcggcaa gccaacaaat accaagtgcc gcgcttggcg
    14881 tttgtcaata aaatggaccg tcagggtgcc aacttcttcc gcgttgtcga gcaaatgaaa
    14941 acccgtttgc gcgcaaaccc tgtacctatc gtcattccgg ttggtgcgga agacaacttc
    15001 agcggtgtgg ttgatttgtt gaaaatgaaa tccatcattt ggaatgaagc cgataaaggt
    15061 acaaccttta cctatggcga tattcctgcc gaattggtcg aaactgccga agaatggcgt
    15121 caaaatatga ttgaagccgc agccgaagcc agcgaagaac tgatggacaa atacttaggc
    15181 ggcgacgagc tgaccgaaga agaaatcgta ggcgcgttgc gtcaacgtac tttggcaggc
    15241 gaaattcagc ctatgctgtg tggttctgca tttaaaaaca aaggtgttca acgtatgttg
    15301 gacgcagttg tagaattgct gccagctcct accgatattc ctccggttca aggtgtcaac
    15361 ccgaataccg aggaagccga cagccgtcaa gccagcgatg aagagaaatt ctctgcattg
    15421 gcgttcaaaa tgttgaacga caaatacgtc ggtcagctga cctttatccg cgtttactca
    15481 ggcgtagtaa aatccggcga taccgtattg aactccgtaa aaggcactcg cgaacgtatc
    15541 ggtcgtttgg tacaaatgac tgccgcagac cgtactgaaa tcgaagaagt acgcgccggc
    15601 gacatcgcag ccgctattgg tctgaaagac gttactaccg gtgaaacctt gtgtgcggaa
    15661 agcgcgccga ttatcttgga acgcatggaa ttccccgagc cggtaatcca tattgccgtt
    15721 gagccgaaaa ccaaagccga ccaagagaaa atgggtatcg ccctgaaccg cttggctaaa
    15781 gaagaccctt ctttccgtgt ccgtacagac gaagaatccg gtcaaaccat tatttccggt
    15841 atgggtgagc tgcacttgga aattattgtt gaccgtatga aacgcgaatt cggtgtggaa
    15901 gcaaatatcg gtgcacctca agtggcttac cgtgaaacta tccgcaaagc cgttaaagct
    15961 gaatacaaac atgcaaaaca atccggtggt aaaggtcaat acggtcacgt tgtgattgaa
    16021 atggaaccta tggagccggg tggtgaaggt tacgagttta tcgatgaaat taaaggtggt
    16081 gtgattcctc gcgaattcat tccgtctgtc gataaaggta tccgcgatac gttgcctaac
    16141 ggtatcgttg ccggctatcc tgtagttgac gtacgtatcc gtctggtatt cggttcttac
    16201 catgatgtcg actcttccca attggcattt gaattggctg cttctcaagc gtttaaagaa
    16261 ggtatgcgtc aagcatctcc cgccctgctt gagccgatta tggcagttga agtggaaacc
    16321 ccggaagaat acatgggcga cgtaatgggc gacttgaacc gccgtcgcgg tgttgtattg
    16381 ggtatggatg atgacggtat cggcggtaaa aaagtccgtg ccgaagtacc tctggcagaa
    16441 atgttcggtt actcgaccga cctgcgttct gcaacccaag gccgcgctac ttactctatg
    16501 gagttcaaga aatattctga agctcctgct cacatagctg ctgctgtaac tgaagcccgt
    16561 aaaggctaat caggcaaata ggccgtccga aaggctgaaa tgatttttca gacggcattg
    16621 ttctttaatc gatctttaat gtaaaggaat tagc
//
LOCUS       DAWEYF010000029        16458 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.029, whole genome shotgun sequence.
ACCESSION   DAWEYF010000029 DAWEYF010000000
VERSION     DAWEYF010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16458
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.029"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            210..1274
                     /locus_tag="WGN93_000687"
     CDS             210..1274
                     /locus_tag="WGN93_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ0226621.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGPGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKEGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1415..1738
                     /locus_tag="WGN93_000688"
     CDS             1415..1738
                     /locus_tag="WGN93_000688"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ0226622.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1810..2133
                     /locus_tag="WGN93_000689"
     CDS             1810..2133
                     /locus_tag="WGN93_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ0226623.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2180..2383
                     /gene="tatA"
                     /locus_tag="WGN93_000690"
     CDS             2180..2383
                     /gene="tatA"
                     /locus_tag="WGN93_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ0226624.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2387..3073
                     /gene="tatB"
                     /locus_tag="WGN93_000691"
     CDS             2387..3073
                     /gene="tatB"
                     /locus_tag="WGN93_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ0226625.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKEIGTDMEGNLHDISNGLKPWEKLP
                     EQRTPADFGVDENGNPLPDAANPASDGISDVMPSERSYTSAETLGDDRQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3087..3857
                     /gene="tatC"
                     /locus_tag="WGN93_000692"
     CDS             3087..3857
                     /gene="tatC"
                     /locus_tag="WGN93_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ0226626.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTEQLKRARPYVIVGAFVIAAVITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3910..4515
                     /gene="maf"
                     /locus_tag="WGN93_000693"
     CDS             3910..4515
                     /gene="maf"
                     /locus_tag="WGN93_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ0226627.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPADINETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAATFLNLL
                     SGTGHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIGGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4531..4884
                     /locus_tag="WGN93_000694"
     CDS             4531..4884
                     /locus_tag="WGN93_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ0226628.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4874..6680
                     /locus_tag="WGN93_000695"
                     /pseudo
     CDS             4874..6680
                     /locus_tag="WGN93_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
     gene            6870..7547
                     /locus_tag="WGN93_000696"
     CDS             6870..7547
                     /locus_tag="WGN93_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ0226629.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7560..8966
                     /locus_tag="WGN93_000697"
     CDS             7560..8966
                     /locus_tag="WGN93_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ0226630.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9084..11510
                     /locus_tag="WGN93_000698"
     CDS             9084..11510
                     /locus_tag="WGN93_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ0226631.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGSADLIIAVTPPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFGSHPLYGDILTACCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTVIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLKNNTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTARDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11555..11800
                     /gene="rpsP"
                     /locus_tag="WGN93_000699"
     CDS             11555..11800
                     /gene="rpsP"
                     /locus_tag="WGN93_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ0226632.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11816..12325
                     /gene="rimM"
                     /locus_tag="WGN93_000700"
     CDS             11816..12325
                     /gene="rimM"
                     /locus_tag="WGN93_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ0226633.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNSELQVKFEGINDRDLAFSLHGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12325..13074
                     /gene="trmD"
                     /locus_tag="WGN93_000701"
     CDS             12325..13074
                     /gene="trmD"
                     /locus_tag="WGN93_000701"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ0226634.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHPKAAEL
                     AELPHLILLCGRYEGIDERLLQTSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13090..13455
                     /gene="rplS"
                     /locus_tag="WGN93_000702"
     CDS             13090..13455
                     /gene="rplS"
                     /locus_tag="WGN93_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ0226635.1"
                     /translation="MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13774..14499
                     /locus_tag="WGN93_000703"
     CDS             13774..14499
                     /locus_tag="WGN93_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226636.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDTRTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14535..15410
                     /locus_tag="WGN93_000704"
     CDS             14535..15410
                     /locus_tag="WGN93_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ0226637.1"
                     /translation="MNPYDLLITPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15487..16413
                     /locus_tag="WGN93_000705"
     CDS             15487..16413
                     /locus_tag="WGN93_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEZ0226638.1"
                     /translation="MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHDHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAEALI
                     KADPEGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHI
                     EFIAPQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETSVNVSG
                     KLYSDALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4269 a         5288 c         3618 g         3283 t
ORIGIN      
        1 gccatctgaa gccgattcgg ttttcagacg gcatcattat ttgacctgac gcaaacagaa
       61 agccttccgc gtgcttaaac acatctcttg tagtaaaata tctaaacaga ttcaactgga
      121 aacggtcagg cttcttcacg ccattcccat ttcaaccgcc gcctgccaga ttcagacggt
      181 attcctactt gaaaacaagg agcgttacaa tgaaagcagc acgtttttac gacaaaggcg
      241 acatccgcat cgaagacatc cccgaaccga ccgtcgcccc cggcaccgtc ggcatcaatg
      301 ttgcctggtg cggcatctgc ggtaccgacc tgcacgaatt catggaaggc ccgattttca
      361 ttccgccttg cggtcatccg cacccgattt ccggcgagtc cgcacccgtc acgatgggac
      421 acgagttctc cggcgtggtc tatgccgtcg gcgaaggcgt ggacgacatc aaagtcggtc
      481 aacacgtcgt tgtcgagcct tacatcgtac acgacgacgt accgaccggc ccgggcagca
      541 actaccacct ctctaaagac atgaacttca tcggcttggg cggctgcgga ggtggcttgt
      601 ctgaaaaaat cgctgtcaaa cgccgttggg tgcatccgat ttccgacaaa atcccgttgg
      661 atcaagccgc tttgatcgaa ccgctgtctg tcggacacca cgcctatgta cgcagcggcg
      721 cgaaagaagg cgatgtcgca ttggtcggcg gtgcaggccc gatcggtttg ctgttggctg
      781 ccgtgctgaa agccaaaggc atcaaagtca tcatcaccga gttgagtaaa gcacgcaaag
      841 acaaagcgcg cgaatccggc gttgccgact acatcctcga cccgtccgaa gtcgatgttg
      901 tcgaagaagt gaaaaaactg accaacggcg aaggcgtgga cgtggcattc gaatgtacca
      961 gcgtgaacaa agtgttggat actttggtcg aagcctgcaa acctgccgcc aatttggtta
     1021 tcgtatccat ctggagccac cctgcaaccg tcaacgtcca cagcgtcgtg atgaaagagc
     1081 tggatgtgcg cggcacgatt gcctactgta acgaccacgc cgaaaccatc aaactggtcg
     1141 aagaaggcaa aatcaacctc gaacccttca tcacccagcg catcaagctg gacgaactgg
     1201 tttccgaagg cttcgagcgt ctgatccaca acaacgaatc cgccgttaaa attattgtga
     1261 gtccaaacct gtaagcaaat tacatttgca acagcacaaa tgccgtctga aacgctcaga
     1321 cggcattttc caacgaagcg caacaggcgt attgcccgag agcagccgtt tagcctatca
     1381 ttccgaacaa acagaaacaa acagaaggaa aatcatggga gattccgtac tatccgccat
     1441 ccaacaaacc atcacccagc gaaaatctgc caatccgtcc gaatcttacg tcgcacagct
     1501 cttgcataag ggcgaagaca aaatcctaaa aaaagtgatt gaagaggcgg gcgaagtgtt
     1561 gatggcatcc aaagacaaaa acccgtccca cctggtttac gaagttgccg acttatggtt
     1621 tcacaccatg attcttctga cacaccacga cctgaaggcg gaagacgtat tggacgaact
     1681 tgcgcgccgc caaggtttgt cgggcttggc cgaaaaagcc gctcgcacag aatcttgaat
     1741 ttatattaaa atccgcactt tcccacattc aatccgtctg accgcttttc agacggcatc
     1801 ggagccgtta tggacaactg tattttctgc aaaatcgccg ccaaagacat tccggcgcaa
     1861 accgtctacg aagacggcga aatggtttgt ttcaaagaca tcaaccccgc tgctccggtt
     1921 catctgctgc tgattcccaa agtccatttc gattcgttgg cacacgccgc gcccgaacat
     1981 cagccccttt tgggaaaaat gatgctgaaa gttcccgaaa tcgccaaagc ggcaggactg
     2041 gcagacggct tcaaaaccct gatcaacacc ggaaaaggcg gcggacaaga ggtcttccac
     2101 ctgcatatac acatcatggg cacacccgta taaaccgtta tttcacaatc aacccctaat
     2161 acttacttaa ggatacatca tgggcagttt ttctctgacg cactggatta tcgtactgat
     2221 tatcgtcgtt ttgatattcg gcaccaaaaa actgcgcaac gtcggcaaag acctcggcgg
     2281 tgcggttcat gacttcaaac aggggctgaa cgaaggcaca gacggcaaag aagcccaaaa
     2341 agacgatgta atcgaacaca aaaaagacga agacaaagcg taatttatgt ttgatttcgg
     2401 tttgggcgag ctggtttttg tcggcattat cgccctgatt gtcctcggcc ccgaacgcct
     2461 gcccgaggcc gcccgcaccg ccggacggct catcggcagg ctgcaacgct ttgtcggcag
     2521 cgtcaaacag gaatttgaca ctcaaatcga actggaagaa ctgaggaagg ccaagcagga
     2581 attcgaagct gccgccgctc aggttcgaga cagcctcaaa gaaatcggta cggatatgga
     2641 gggtaatctg cacgacattt ccaatggtct gaagccttgg gaaaaactgc ccgaacagcg
     2701 cacgcctgct gatttcggtg tcgatgaaaa cggcaatccg cttcccgatg cggcaaaccc
     2761 cgcatcagac ggcatttccg acgttatgcc gtccgaacgt tcctacactt ccgccgaaac
     2821 ccttggagac gacaggcaaa ccggcagtac agccgaaccc gcggaaaccg accaagaccg
     2881 cgcatggcgg gaatacctga ctgcttctgc cgccgcaccc gtcgtacaga ccgtcgaagt
     2941 cagctatatc gataccgctg ttgaaacccc tgttccgcat accacttcgc tgcgtaaaca
     3001 ggcaataagc cgcaaacgcg atttgcgtcc caaatcccgc gccaaaccta aattgcgcgt
     3061 ccgtaaatca taaagagggc aatccggtgt ccgaaacaca aaacgaacaa cccgtccaac
     3121 cgcttgtcga gcatctcatc gagctgcgcc gccgcctgat gtggacggtt gtcggcatct
     3181 tagtctgctt tttcggccta atgccgtttg cccaacaact ctatactttt atcgccgacc
     3241 cgctgatggc aaacctgccc aaagacacca gcatgattgc caccgatgtc atcgcaccgt
     3301 ttttcgtgcc ggtcaaagtt accctgatgg cggcattttt aatttcgctg ccgcatacgc
     3361 tctaccaaat ctgggcattt gtcgcgcccg cactctacca aaacgaaaaa cgcctgatta
     3421 cgccgctcgt cctctccagc gtcagcctgt ttttcatcgg catggcattt gcctactttt
     3481 tggttttccc cgtcattttc aaattccttg ccagcgttac ccctgtcggt gtcaatatgg
     3541 cgacagacat cgacaaatac ctctccttca tcttggggat gtttgtcgca ttcggtacaa
     3601 cgtttgaagt ccccattgtc gttatcctgt taaccaaaat tggtgtggta acaaccgaac
     3661 agctcaaacg cgcccgcccc tatgtgattg tcggcgcgtt tgtcattgcc gcagtcatca
     3721 caccgcccga tgtgatttca caaaccctgc ttgccattcc gctgattctc ttatacgaag
     3781 caggtatttg gttcggacgc tttttcacgc cacgttcaga acaggatggc gacatacagc
     3841 cgcctgcaac aacctgacac tatgccgtcc gaacctccgc ctcataccgc aacagattaa
     3901 ggaatacctt tgaataccct ctatttaggt tcaaacagcc cgcgccgaat ggaaatcctg
     3961 acacagttgg gctatcaggt cgtcaagctg cctgccgaca tcaatgaaac ggtcagacag
     4021 aacgaagacc ctgcccgtta cgttcaaagg atggcagaag aaaaaaaccg aaccgccctg
     4081 accctctttt gcgaaaccaa cggcacaatg cccgatttcc ccctgattac cgccgacacc
     4141 tgcgtcgttt cagacggcat catattgggc aaaccccgct cccaagctga agcggcaacc
     4201 tttctaaacc tgctgtcggg aaccgggcat accgtcctga ctgctgtctg cattcattat
     4261 cgcggcaaaa cgtcaagccg cgtccaaacc aaccgcgtcg ttttcaagcc cctgagttcg
     4321 gaagaaattt ccgcctatgt gcaaagcggc gaaccgatgg acaaagccgg tgcctacgcc
     4381 gtacaaggca taggcggcat ctttatccaa tctatcggag gcagcttcag cggcattatg
     4441 gggctgcccg tttatgaaac cgtttcgatg ttgcaggatt tgggataccg taccccacct
     4501 ttcatccgag cctaacccgt aaagaccgcc gtgaacagac aaaccgctta cctccttacc
     4561 tctttcagcc tgatcgcact gataatcctg tccctttcct gggaactgtg gattgcaccg
     4621 ttgcgcccgg gcggctcgtg gctcgcgctc aaagccctcc ccctctgtct gccgctttca
     4681 ggcatcttga aaaagaaaat ctatacttac caatacagct ccatgctggt tctgatttac
     4741 tttgccgaag ccgtcatgcg cctgttcgac gcctatcccg cagaacagat ttgcgccgcg
     4801 ctttccgcag tattcagcat catcttcttc atatcctgcc tgtcgttcgt caaacaatac
     4861 aaggaaacaa acaatgcccg ctgaaacgac cgtatccggc gcgcaccccg ccgccaaact
     4921 gccgatttac atcctgccct gcttcctttg gataggcatc gtccccttta ccttcgcgct
     4981 caggcagcaa ccgtcgcccg acttttacca cgatgctgca gccgcagccg gcctgattgt
     5041 cctgttgttc ctcacggcag gaaaaaaact gtttgatgtc aaaatccccg ccatcagctt
     5101 ccttctgttt gcaatggcgg cgttttggta tcttcaggca cgcctgatga acctgattta
     5161 ccccggtatg aacgacatcg tctcttggat tttcatcttg ctcgccgtca gcgcgtggac
     5221 ctgccggagc ttggtcgcac acttcggaca agaacgcatc gttaccctgc ttgcctggtc
     5281 gctgcttatc ggctccctgc ttcaatcctg catcgtcgtc atccagtttg ccggctggcc
     5341 ccatgcttca aaacattatt gtttacagcg ggcaaggcgt aatcggacac atcggacagc
     5401 gcaacaacct cggacactac ctgatgtggg gcatactcgc cgccgcctac ctcaacggac
     5461 aacgaaaaat cccgcccgcc ctcggcgcaa tctgcctgat tatgcagacc gccgttttag
     5521 gtttggtcaa ttcgcgcacc atcttgacct acatagccgc catcgccctc atccttccct
     5581 tctggtattt ccgttcggac aaatccaaca ggcggacgat gctcggcata gccgcagccg
     5641 tattccttac cgcgctgttc caattttcca tgaacaccat tctggaaacc tttactggca
     5701 tccgctacga aactgccgtc gaacgcgtcg ccaacggcgg tttcacagac ttgccgcgcc
     5761 aaatcgaatg gaataaagcc cttgccgcct tccagtccgc cccgatattc gggcacggct
     5821 ggaacagttt tgcccaacaa accttcctca tcaatgccga acagcacaac atatacgaca
     5881 acctcctcag caacttgttc acccattccc acaacatcgt cctccaactc cttgcagaga
     5941 tgggaatcag cggcacgctt ctggttgccg caaccctgct gacgggcatt gccgggctgc
     6001 ttaaacgccc cctgaccccc gcatcgcttt tcctgatctg cacacttgcc gtcagtatgt
     6061 gccacagtat gctcgaatat cctttgtggt atgtctattt cctcatcccc ttcggactga
     6121 tgctctttct gtcccccgca gaggcttcag acggcatcgc cttcaaaaaa gccgccaatc
     6181 tcggcatact aaccgcctcc gccgccatat tcgcaggatt gctgcacttg gactggacat
     6241 acacccggat ggttaacgcc ttttcccccg ccactgacga cagtgccaaa accctcaacc
     6301 ggaaaatcaa cgagttgcgc tatatttccg caaacagtcc gatgctgtcc ttttatgccg
     6361 acttctccct cgtaaacttc gccctgccgg aataccccga aacccagact tgggcggaag
     6421 aagcaaccct caaatcacta aaataccgcc cccactccgc cacctaccgc atcgccctct
     6481 acctgatgcg gcaaggcaaa gttgcagaag caaaacaatg gatgcgggcg acacagtcct
     6541 attaccccta cctgatgccc cgatacgccg acgaaatccg caaactgccc gtatgggcgc
     6601 cgctgctacc cgaactgctc aaagactgca aagccttcgc cgccgcgccc ggtcatccgg
     6661 aagcaaaacc ctgcaaatga cccgcgccgg cggatgcgga taccgcccga aatgtaaagc
     6721 tccatgcaag acattgcaaa aaacagcaaa ccggtaggga aatacgctat caaaaaacat
     6781 tgcagccgtg ttaagataaa ccgtcaaaca atcttttcac gccccgcccg aaacagggtc
     6841 ggggcatacc cttacgaaaa ggaaacacca tgagccgcgt attactcgta gatgacgatg
     6901 ccctgctaac cgaactgctg accgaatacc tgagcgccga aggtctgaac gtccgcagcg
     6961 ttcccgacgg ggaagcaggc gtacaggaaa tcctgagcgg gcagtacgat gtagtcgtat
     7021 tggattccat gatgcccaaa atgaacggct tggatgtctt gaaaaacgta cgcgcccgaa
     7081 gcaccgtccc catcatcatg ctgaccgcca aaggcgacga catcgaccga atcatcggct
     7141 tggaaatggg cgcggacgac tatgtcccca aaccctgcac accacgcgaa ctcttggcac
     7201 gcatcaatgc catcctgcgc cgcgcacaac acagcggcga acagaacaac gcacccaaca
     7261 gcatctccgt cagcgatgtc gtcctgtacc ccgccaaacg ccaggcatcc gtcaaagaca
     7321 tgccgctcga actgaccagc accgaattca acctgctcga agtcctgatg cgccatgccg
     7381 gacaggtagt cagcaaagaa accctgtccg tcgaagcact cgaccgcaag ctggcaaaat
     7441 tcgaccgcag tatcgacgta cacatctcca gcatccgcca caagttgggc gatgcctctc
     7501 tgattcaaac cgtacgcggc ttgggctacc tgtttgtcaa aaactgaagc aacgggcaaa
     7561 tgaaactgtt ccaacgcatc ttcgccacat tttgcgcggt tatcgtctgt gcaatctttg
     7621 tggcgagttt ttctttttgg ctggtgcaga acacccttgc cgaaaaccag ttcaaccaac
     7681 gccgcaccat cgaaaccact ttgatgggca gcatcatttc cgcattccgg gcacgcgggg
     7741 acgcgggcgc gcgcgaaatc ctgacggaat ggaaagacag ccccgtctca tcgggcgtgt
     7801 acgttataca gggcgacgag aaaaaagata tcctgaaccg gtatatcgac agctatacca
     7861 tcgaacgcgc ccggcttttc gccgccggac acccgcattc caacctcgtc catatcgaat
     7921 acgaccgctt cggcgaagaa tacctgttct tcaccaaaga ctgggacaaa ctccaagccc
     7981 gccgcctgcc cagccccctg ttgatccccg gcctgccgct cgccccgatt tggcacgaac
     8041 tcatcatatt gtccttcatc atcatcgtcg gactgctgat ggcatatatc ctcgccggca
     8101 acattgccaa acccatcaga atcttaggca acggcatgga cagggtggca aacggagaac
     8161 ttgaaacccg tatctcccaa caggtcgacg accgcgacga cgaattgtcc catcttgcca
     8221 tccaattcga caaaatggtg gaaaaactcg aaaaactcgt tgccaaagaa cgccacctgc
     8281 tccatcacgt ctcccatgaa atgcgttctc cccttgcgcg catgcaggca attgtcggac
     8341 tgattcaggc gcagccccaa aaacaggagc aatatctcaa acggctggaa ggcgaactga
     8401 cccgcatgga tacgctggcc ggggaactgt taaccctgtc ccgtctcgaa acttccaata
     8461 tggctttgga aaaagaaagc ctgaaactcc tgcccttcct gggcaacctg gtagaagaca
     8521 atcaaagcat tgcccagaaa aacggacaaa cggttaccct gtctgccgac ggaaaaatcc
     8581 ccgaaaatac aaccatcctt gccaacgaaa gctacctgta ccgcgccttc gacaacgtca
     8641 tccgcaacgc cgtcaactac agtcccgaag gcagcaccat cctgatcaac atcggacaag
     8701 accacaaaca ctggataatc gacgttaccg acaacggccc cggcgtggac gaaatgcagc
     8761 tcccgcacat cttcaccgct ttctaccgtg cagactccag tgcgaacaaa cccggaacag
     8821 gactggggct tgcattgacc caacatatta ttgaacagca ctgcggaaaa atcatcgccg
     8881 aaaacatcaa accgaacggt ctgcggatgc gctttatcct gcccaagaaa aaaaccggtt
     8941 ccaaaacaga aaaaagtgcg aactgaccat aatgccgtct gaaccggctt cagacggcat
     9001 tgcacaaaca gttaccccaa aacaaacaca cagcgggtgc atctccaaca atcacgcaca
     9061 taccgtccgc aaaggaatat atcatgtcgg cacaaaccga tccgggctac tttttcatgc
     9121 ccaaccacat tatcctgata ggcgcgagcg aacgtccgta cagcctgggc gaacgcgtac
     9181 tcagcaacct gctgagtacg ccctttcaag gaaaaatcac ccccgtaaac ccgcgccacc
     9241 acaccatagc cgggcttccc gcctacacca gcctcaacaa aatccccggc agtgcagacc
     9301 tgattattgc cgttaccccg cccgacagtt acgacaccct cttcaaaacc tgccgcaaaa
     9361 agcagctccg acacatcatc ctcatacagg actgggacag cctgtctgcc gcagaactgc
     9421 acaccgccga aactgccatc cgcaaacacc acggcaacgg actcaacatc accgcctgca
     9481 ccaccgcagg catccaactg ccctcactcg gacttaacat cagtacccaa gacggatacg
     9541 ccgcaggcca taccgccata ctgaccggca atgccgccgt cagccgccaa atcgacaaca
     9601 tcctgaacaa actccgtcaa ggcacatccc gccacatcag cctgcatccc ggcatcagcc
     9661 ccatcacatc cgccgattgg ctcaaccgct tcggacacag cctgcacacc aaaaccgccg
     9721 tcctacacca caaccctgaa gaggatcagc gcaaactgtt cagcgcaatc cgccaattta
     9781 cccgccatac gccgctgatt ctccacatca cctgccgcac gacagaaacc gaccgtgccg
     9841 tactgcactg cctcgcccga cactgcaact tcctcatcag tttcaacgcc gacgacctcg
     9901 aagccgcact gcgcgcccaa ctgtccgacc ttccacccct gtcccgactc gacatcctgt
     9961 ccgacacgcc tgccgaatgg ctgaacgcgc acgcgccaaa aaccctcgcc ctccactttc
    10021 ccaaccttcc ccaccacatc cgcaacggac acctgaccgg cacacccaca ccctcaatct
    10081 gccacgacat cgcctcacgt cagcttgccc gccccgacac ccaagccgtc ctgaccatcc
    10141 tcagcccctc cggacacgag gattacaaaa aaacagcacg cgcccttatc cgcctgtccg
    10201 aacagaccgc caaacccctg ctcgtcagca gccccttttc agacggcata acacatttcg
    10261 acacccccac tcaggcaatc cgcacccttt cctaccgcaa caccgccgcc gccctgaaac
    10321 aggcacagct cgacattgca ccgccgcagc catgccgtct gaaaacaccg caaccccaaa
    10381 acatcaaaaa agcccttgca gcggcaaatc cctccctgct cgccgaagcc ctgcacctcc
    10441 ccccctaccg gcacactacc cataacgccg tccaattcca attcggcagc caccccctct
    10501 atggcgacat cctgaccgca tgctgcaacg gacaaaccac tgccgtactc ccgccgttta
    10561 ccacgctcga cagccgccac cttgcccgct ttgccgaact cgacggcaca caaaccctcg
    10621 accagttcct gcacacactg accgtcattc ccgaataccg ccaacacatt ctcggcatca
    10681 ccctcaacct caacggcgga caatacagca gcgatttcat cttaaagaca cccgaaacac
    10741 acgacacgcc caaacgcaag aacacaggca aagccgccca aaccctcgaa catgccgccg
    10801 caaaaatgca gagtgccgcc gcatacctga aacacaaaaa cccgacagcc gccgaatttc
    10861 tccgccacac aagcgaagcc gccgcagaac tgctcggcag caaaaccgaa accggagcag
    10921 ccgtacccaa cgtacttgcc ccctatcccg cagcacacct caaaacactg tccctaaaaa
    10981 acaacacgac cgttaccatt accccccttt tgcccgaaga cgcagaagcc aaacagcagt
    11041 tcgtccgcag cctcagcccc gaagcacggt acacacgttt catgacccac accaacgaac
    11101 tgcccgcagc cacgttggca cgcctgtgca accccgacta ccactgtgaa gccgcatgga
    11161 cggcaaggga tgccgacagc aacatcgtcg ccgtcgtccg ccacagccgc ctgaaccgca
    11221 acgaatgcga attcggcatc acactggcgg aacatatgcg cggcagcggg ctggcacaga
    11281 aaatgatgga actcatcatc caaaccgccg cacagcaagg ctaccggact atgagtgccg
    11341 acattctcaa aaccaatact cccatgatca aacttgctga aaaatcagga tttaccctca
    11401 aggaatcgga caccgaaaaa aacctgtacc gcgcatatct gaaccttgcg gcagacaaaa
    11461 caacagaaaa aacaaataaa aacttgcaca ccgaccacaa aataacctaa aatcggcagt
    11521 ttccatatat ccgattttct caaaaggact caaaatggta gttatccgtt tggcacgcgg
    11581 cggctcgaaa caccgccctt tctacaacgt catcgttact gactcacgca gccgccgcga
    11641 cggccgcttc atcgaacgcg taggcttcta caaccccgta gccaacgaaa aacaagagcg
    11701 cgtccgcctc aacgcagacc gcctgaacca ctggattgca caaggcgcgc aagtcagcga
    11761 ctccgttgca aaactgatta aagaacaaaa agccgcctaa tccacatttg ccgccatgac
    11821 agacactcaa aaccgggtag ccatgggcta catcaaaggc gtattcggca taaaaggctg
    11881 gttgaaaatt gccgccaaca ccgaatattc cgacagcctt ttggactacc ccgagtggca
    11941 tttggtcaag gacggcaaaa ccatcagcgt tacccttgaa gccggaaaag tcgtcaacag
    12001 cgaactccaa gtcaaattcg aaggcataaa cgaccgcgac ttggcattct cattgcacgg
    12061 ttacaccatc gaaatacccc gtgaagcatt cgccccgaca gaagaagacg aatactactg
    12121 gacagacttg gtcggcatga ccgtcgtcaa caaagaccat accgttttag gcaaggtaag
    12181 caacctgatg gaaaccggcg caaacgacgt attgatgatt gacggagaac acgggcagat
    12241 tctgattccg ttcgtttccc aatatatcga aaccgtcgat accggcagca agattattac
    12301 tgccgactgg ggtttggact actgatgctt atccaggcag ttaccatttt ccccgaaatg
    12361 ttcgacagca ttacccgcta cggcgtaacg ggacgcgcga acagacaggg aatctggcag
    12421 tttgaagcag tcaatccccg aaagtttgcc gacaacagat tgggctacat cgacgaccgc
    12481 ccgttcggcg gcggcccggg aatgattatg atggctccgc cgcttcatgc agcaatagaa
    12541 cacgccaaag cacaatcttc ccaagctgca aaagtcattt acctcagccc ccaaggaaaa
    12601 ccgctgacac acccaaaagc ggcagaactg gcagaacttc cgcatctgat tctgctgtgc
    12661 ggacgctatg agggaataga cgaaagactg ctgcaaacca gcgtcgatga agaaatcagc
    12721 atcggagact tcgttgtttc cggcggagag cttcccgcca tgatgctgat ggatgcggta
    12781 ttgaggctcg tacccggcgt attgggcgat atgcagtctg ccgaacaaga ttcgttctca
    12841 agcggcattt tggactgccc ccactacacc aaacccttag aatttcaagg catggctgtt
    12901 ccggaagtat tacgttccgg caatcatggc ttgatagcgg aatggcggtt ggaacaatcg
    12961 ctgcgccgca ccttggagcg cagacccgat cttttggaaa agcgcgtttt aatcccaaag
    13021 gaatcccgcc tcttagaaac catccggcaa gagcaacggg aaatccaatc ataatttagg
    13081 aaaaaaacaa tgaacctgat tcaacagctc gagcaagaag aaattgcccg tctgaacaaa
    13141 gacatccccg aattcgcacc gggcgacacc gtagtcgtat ccgtacgcgt cgtggaaggt
    13201 acccgcagcc gtctgcaagc ctacgaaggc gttgtcattg cacgccgcaa ccgtggtctg
    13261 aacagcaact tcatcgtccg taaaatttcc agcggcgaag gtgtggaacg tactttccaa
    13321 ctgtactctc cgaccgtcga aaaaatcgaa gtcaaacgcc gtggcgacgt acgccgtgcc
    13381 aaactgtact acctgcgcgg cctgaccggt aaagctgcac gcattaaaga aaaactgcct
    13441 gcacgcaaag gttgattcaa accgttttcc cccaatgccg tctgaacctt cagacggcat
    13501 tttttatcgc cgcaatatca acaagacaac gatattccca atccgcctcc cctgcttaac
    13561 aagcactccc gtctattcaa acaaaattta cagaccaaac gttatacagt atcatagccg
    13621 ccatataacg ataaccgctt tgccaacttc cctttcaaaa ccgcaaatca ttatgacacc
    13681 ttccctctta ctgtcaggat tgaccttccg actcttcctc gccctgattg ccgtatccct
    13741 tttatggggc gtttaccttt gggcggtatc ggtatgagca tcatcgttga aaacctgacc
    13801 gtcagctacc gccgccgacc tgccgtgcac catgtggaca ttacttttga agaacatagt
    13861 atgtgggcgg ttttcggtcc caacggcgcg gggaaatcca cctttctcaa atccttaatg
    13921 ggattgcagc ctatcgatac gggcagcatc cggctggacg gattgacccg tcagaacatt
    13981 gcctaccttc cccagcagtc cgacatcgac cgctcgcagc ctatgaccgt tttcgacttg
    14041 gcggcaatgg ggctatggta tgaaatcggt tttttcagag gaataaatgc cgttcaaaaa
    14101 caacgcgttc acgaatcttt ggaacgcgtc gggatgcggc agtttgccgg ccgccaaatc
    14161 gcccacctct caaacggaca attccagcgt gtcctttttg cccgaatgct ggttcaaaac
    14221 gccaaattcc tacttctaga cgaacctttc aacgctgttg atacacggac gacctacgaa
    14281 cttctcgacg tattgcagaa atgccattgc ggcggacacg ccatcatcgc cgtactgcac
    14341 gattacgaac aagtccgtgc ctactttccc aataccctgc tgctcgcccg cgaaaaaatt
    14401 gcggcaggcg caaccgagac cattctgaca gaaccctacc tcgcccaagc caacgccaaa
    14461 atgcagcaac aggaaagccc cgagtggtgc gcctcataaa tgccgtctga aaccatgtcc
    14521 ccgtaccaaa cactatgaac ccctacgacc tgctcatcac accctttgca gaattcgact
    14581 ttatgcgcta cgccctcgca tccgtcttct gcctgtccct cagtgccgca cccgtcggcg
    14641 tattcctcgt catgcgccgt atgagcctga taggcgacgc attgagccac gccgtcctgc
    14701 ccggtgccgc cgtcggctac atgtttgccg gcttaagcct gcccgccatg ggtttgggcg
    14761 gcgtagccgc aggtatgctg atggcactgc ttgccggact cgtcagccgc ttcaccaccc
    14821 tgaaagaaga tgccaacttt gccgcctttt atctcagcag cctcgccata ggtgtagtcc
    14881 tcgtcagcaa aaacggcagc agcgtcgatt tgctccacct ccttttcggc tccgtacttg
    14941 ccgtcgatat tcctgccctg caactcatcg ccgccgtatc caccctcaca ctgcttaccc
    15001 ttgccgtcat ctaccgcccg ctcgtactcg aaagcatcga ccccctgttc ctcaaatccg
    15061 tcggcggcaa aggcgggctt tggcacgtac tctttctcgt cctggtcgtc atgaacctcg
    15121 tatccggctt tcaagccctc ggcacactca tgtccgtcgg actcatgatg ctgccagcca
    15181 ttaccgcccg cctgtgggcg aagcacatgg gcgcactcat cctcctatcc gttctgacag
    15241 ccctgctgtg cggcttgagc gggctgctca tttcctacca catcgaaatc ccttccggcc
    15301 ccgccatcat cctctgttgc agcgtccttt atctcttttc cgtcatactc ggcaaagaag
    15361 gcggcattct gaccaaatgg ctcaaaaacc accgccacca caccacctga ccccgcaagc
    15421 cgcttgaaca aacaggcggc ttgttttacc ataacagatg ttacgttata tcacaggaga
    15481 acaattatga aacaccccaa actcaccctt atcgccgcat tgctgaccac tgccgcaact
    15541 gccgcccccc tgccggttgt aaccagcttc agcattttag gcgacgtagc caaacaaatc
    15601 ggcggagagc gcgtatccat acaaagtttg gtcggagcca accaagatac gcacgcctat
    15661 catatgacca gtggcgacat taaaaaaatc cgcagtgcaa aactcgtcct gctcaacggc
    15721 ttaggacttg aagctgccga tgtacaacgt gccgtcaaac agagcaaagt atcctatgcc
    15781 gaagcgacca aaggcatcca acccctcaaa gccgaagaag aaggcggaca ccatcacgac
    15841 cacgatcatg accacgatca tgaccacgaa ggacaccacc atgaccacgg cgaatatgac
    15901 ccccacgtct ggaacgaccc cgtccttatg tccgcctatg cccaaaacgt cgccgaagcc
    15961 ctgataaagg ccgaccccga aggcaaagtt tattatcaac aacgtttggg caactaccaa
    16021 atgcagctca aaaaactgca cagcgacgca caagccgcat ttaacgccgt ccctgccgcc
    16081 aaacgcaaag tcctgaccgg gcacgatgcc ttttcctaca tgggcaaacg ttaccatatc
    16141 gaattcatcg ccccgcaagg tgtgagcagc gaagccgagc cttcagccaa acaagtcgcc
    16201 gccatcatcc gacaaatcaa acgcgaaggc atcaaagccg tctttaccga aaacatcaag
    16261 gacacccgta tggttgaccg tatcgccaaa gaaaccagtg tcaacgtcag cggcaaactg
    16321 tattccgacg cactcggcaa cgcgcccgca gacacctaca tcggaatgta ccgccacaac
    16381 atcaaagcct tgaccaacgc gatgaagcaa taaaaccgtt tgattggttt gaatttgaaa
    16441 aggcaaaagg ccgtctga
//
LOCUS       DAWEYF010000030        16437 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.030, whole genome shotgun sequence.
ACCESSION   DAWEYF010000030 DAWEYF010000000
VERSION     DAWEYF010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16437
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.030"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(271..3060)
                     /gene="ileS"
                     /locus_tag="WGN93_000706"
     CDS             complement(271..3060)
                     /gene="ileS"
                     /locus_tag="WGN93_000706"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ0226639.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKISPAIDVAYPFKDTAA
                     LAAAFGLASIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYIGETPRVADMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCENYDKLSDTMDVWFDSGSTHYSVVKQREKLEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
     gene            complement(3201..4121)
                     /gene="ribF"
                     /locus_tag="WGN93_000707"
     CDS             complement(3201..4121)
                     /gene="ribF"
                     /locus_tag="WGN93_000707"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ0226640.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKRW"
     gene            complement(4648..5943)
                     /gene="tyrS"
                     /locus_tag="WGN93_000708"
     CDS             complement(4648..5943)
                     /gene="tyrS"
                     /locus_tag="WGN93_000708"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ0226641.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     SQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAVEAKDQASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(6006..7883)
                     /locus_tag="WGN93_000709"
     CDS             complement(6006..7883)
                     /locus_tag="WGN93_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ0226642.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKNWLPGGFLGVDIFFV
                     ISGFLMTAILLREMSGGGRFSLKAFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFF
                     LLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVA
                     RKSPRVQFGFLAALCALSLAASFMPSAFDKYYLPHLRACEMLVGSLTAVWMRYRQQRN
                     LAVGRCCAAAGALFSACILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPL
                     KKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAVVLILLLSLFSY
                     HCIEKPFKKWQGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCH
                     NNTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWAATMVSADACAYVEGY
                     ASRVFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFKKFDRM
                     LHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANARIREL
                     AAKYPNVYIIDAAAYIPANFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHN
                     H"
     gene            complement(7894..7998)
                     /locus_tag="WGN93_000710"
                     /pseudo
     CDS             complement(7894..7998)
                     /locus_tag="WGN93_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8250..9341)
                     /gene="ychF"
                     /locus_tag="WGN93_000711"
     CDS             complement(8250..9341)
                     /gene="ychF"
                     /locus_tag="WGN93_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ0226643.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            complement(9455..11131)
                     /locus_tag="WGN93_000712"
     CDS             complement(9455..11131)
                     /locus_tag="WGN93_000712"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ0226644.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSSGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF"
     gene            11306..11737
                     /locus_tag="WGN93_000713"
     CDS             11306..11737
                     /locus_tag="WGN93_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ0226645.1"
                     /translation="MSSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVI
                     LAALLLFLTYTGKWQGVNGFTGKNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            complement(11968..12663)
                     /locus_tag="WGN93_000714"
     CDS             complement(11968..12663)
                     /locus_tag="WGN93_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ0226646.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(12679..13179)
                     /gene="hpaC"
                     /locus_tag="WGN93_000715"
     CDS             complement(12679..13179)
                     /gene="hpaC"
                     /locus_tag="WGN93_000715"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ0226647.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            complement(13294..13734)
                     /gene="nadR"
                     /locus_tag="WGN93_000716"
     CDS             complement(13294..13734)
                     /gene="nadR"
                     /locus_tag="WGN93_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ0226648.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            complement(14077..14586)
                     /locus_tag="WGN93_000717"
     CDS             complement(14077..14586)
                     /locus_tag="WGN93_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ0226649.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWVRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(14665..14740)
                     /locus_tag="WGN93_000718"
     tRNA            complement(14665..14740)
                     /locus_tag="WGN93_000718"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14705..14707),aa:Lys,seq:ttt)
     gene            14951..16030
                     /gene="apbC"
                     /locus_tag="WGN93_000719"
     CDS             14951..16030
                     /gene="apbC"
                     /locus_tag="WGN93_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ0226650.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQHSDGIHIALHF
                     GFPVAHIAAAIADSVQETLMPETGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSGGIQVMSIGFLVDTGQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGAAAQLFDKHPAIARIYTDA
                     AFQIALSIADKGKDFSSRFPKIVVE"
BASE COUNT         3736 a         4479 c         4425 g         3797 t
ORIGIN      
        1 gttcagttgc gttccgacaa caccgcaatc tcgaaatccg tcattcccgc acaggcggga
       61 atccagaccc ctgacgcggc gggaatctat cggaaatgac tgaaacctcg agattctaga
      121 ttcccacttt cgtgggaatg acggttcagt tgcattccga caacaccgca atcttgaaac
      181 ccctccgccg ttataaagac aaatcgcggc acaaaaaatg ccgtctgaaa tgctgttcgg
      241 cggtttcaga cggcatttgc tcaaacttta tcaggcgtaa tggcgcgttt cgccttctcc
      301 gccgacattc tctgcacagc gtttgcagac ggtttcatag cctgcaaccg cgcccacatc
      361 gcgggtgtag tgccagcagc gttcgcattt ttcaccatca ctggctttag cggcaacggc
      421 aagttcgctg cctactttca cttctgcttt agacaccagc aaagcaaagc gcaattcttc
      481 gcccaaagca ttcagatagc cggccatttc ttccggcgcg gtaatttcgg cttcggcttg
      541 caaggacgaa ccgacggttt tgtcggcgcg caaaggctcg atggcggcgg ttaccgcttc
      601 gcgggcttcg cggattgccg tccatttttt caccagttcg gcttcggttt tttcgttgat
      661 ggtcgggaac tcgtgccaag tatggaagag gacgctgtct tcttcgccgc cgccgatgat
      721 gtcccacgct tcttcgccgg tgaagcacaa aatcggtgca atcaagagaa ccaaactgcg
      781 tgtgatgtga tacagggcag tttgtgcgct acggcgtgca tggctgtcgg ctttggtggt
      841 gtagaggcgg tctttcagga tgtcgaggta gaacgcaccc aagtcttccg agcagaaaga
      901 aacaatgtct tttacggcaa agtggaaggc ataacgcgga tagtaatcgc ctgccagacg
      961 ctcttgcagc tgacgtgcca ataccacggc gtagcggtcg atttccacca tatccgcctg
     1021 ttgcacggca tcttcaatcg gattaaagtc gctcaagttg gcaaacaaaa agctcaaggt
     1081 attgcggata cggcggtagc tttcggttac gcgtttgagg atttctttgg aaatcgccaa
     1141 ttcgccgctg taatcggtag atgccgccca caggcgcagg atgtctgcgc cgaattcgtt
     1201 ataaacctct tgcggtgcaa cgacgttgcc gatggatttc gacatttttt tgccttcgcc
     1261 gtcgacaacg aaaccatggg tcagcagctg tttatacggc gcgcgaccca ttgatgaggc
     1321 gcagccggtc agcatggacg attgaaacca gccgcggtgt tggtcgctgc cttcgagata
     1381 caaatcagcc ggccattcca atttttcgcg ttgtttcaca acggaataat gggtcgagcc
     1441 ggagtcgaac catacgtcca ttgtgtcaga aagtttatcg taattttcgc aatcttccgc
     1501 gctcaagagt tcgctcttat cgagggagaa ccacgcttcg atgccttttt cttcgatttt
     1561 cagggcaact ttttccaaaa gttcggcaga gttcggatgc agctcgcccg tttctttgtg
     1621 aacaaagaaa gtcatcggcg tgccccaata gcgttggcgt gaaaccaccc agtcaggacg
     1681 accttcaatc atggcttcca aacgcgcgcg accccaagac gggaagaatt cggtgtcgtc
     1741 cacggccttg atggctttgt cgcgcagggt tttgccgtcg gcaccagctt tgtccatacc
     1801 gacaaaccat tgacctgtcg cgcggtaaat cagcggcgtt ttgtgccgcc agcagtgggc
     1861 gtagctgtgt tcgattttac tgcttgccaa aaggttgccg gtttcttcca accattgcag
     1921 gatgacgggg ttcgcctccc aaacgcgcat atcggcaacg cgcggcgttt cgccgatgta
     1981 tttgccttcg gcgttgacag gattgtaaag ctcgatgccg tatttgttgc agacggcgta
     2041 gtcttccaaa ccgtgcgcgg gcgcagtatg caccaagccg gtaccggcat cggtggtaac
     2101 gtgttcgccg ttaagcatgg gaatatcgcg ttcgaggaac ggatggttca tgtgcaggtt
     2161 ttccagcttg tcgccggtgg tttcggcaag gatggcgatg ccgtctgaaa agccgtaacg
     2221 tttgagcgcg tcttccgcca aatctttcgc caataccaat ttgcctttgg gcgtatcaat
     2281 cagttgatac accacgtccg cgccggcaga tacggcttgg ctcgcaggca gcgtccaagg
     2341 cgtagtcgtc cagatgacgg caaacgcttt gccttcgata cttgccaaac cgaatgcggc
     2401 ggcaagcgcg gcagtgtctt taaacggata ggcaacgtca atcgcgggcg agattttgtc
     2461 tttatattcc acttccgctt cggccagcga agaaccgcag tccaagcaga attgaaccgg
     2521 tttcgcaccc cggtagagat agccggattt gtagatttcg ccgagcatac gcacggtatc
     2581 ggcttcggtt ttgaaatcca tagtcaggta aggatggtcc cagtcgccca acacgcccaa
     2641 gcggataaag tcttttttct gacgggcaat ctgttcggcg gcgtattcgc ggcacaattc
     2701 gcggaagcgg gctttgggca tgtctttgcc gtgcagcttt tccaccatca cttcgatggg
     2761 cagaccgtgg cagtcccaac ccggcacata aggcgcatcg aaaccggctt gggttttgct
     2821 gcggataatg atgtctttaa ggattttatt gacggcgtga ccgatgtgga tgtcgccgtt
     2881 ggcatacgga ggaccgtcgt gcagaatgaa tttcgggcgg cctttggcga tttcgcgcag
     2941 tttttggtag cgtttttgct cgtaccagct tttcagccat gcaggctcgc gcttggcaag
     3001 attgccgcgc attggaaacg ggctctcgag caggttgacg gttttgctgt aatcggtcat
     3061 tttttaatct ctattgttac aatatttcgg ttcagacggc attgcgcctc aaacagtatt
     3121 tcacaacggg aaacccctat gccgtctgaa aagttaaaag attgattgta gcccaatcgg
     3181 atggtttgta taaggttttt ctaccaacgc tttgcggctt ccatatcggc ttcaatctgc
     3241 cttttcagtt cttccatacc gtcaaacttt tcctcatcgc gcagtttgtg caggaagcgg
     3301 acgttcagcc gttgtccgta caggtcgcct tgaaagtcga acaggtggac ttcaagcttt
     3361 tgagaacagc cgctatcaac ggtgggattg aagccgaagc tcgccacgcc gcgccgcgtg
     3421 ccgaatgcgc cgtccgcttc gacgacgaac acgccgccga gtgcataacg gtggcggggc
     3481 aggcggatgt tggcagtcgg ggcgtttaag gtgcgtccga gttttctgcc gtgcaccacc
     3541 ctgccgctca agacgtagtc gtgtcccaaa agttttttcg cataggcaag gttgccgtct
     3601 gaaagggctt gtcgcacggc ggtactgctg gtgcggatgt cttcgacgat gacggaaggc
     3661 gtacgctcgg tctgcatatc gggctgttgt gccaaaagtt caaaacagcc ttcccgcccc
     3721 gcaccgaaac ggaaatcatc gccgacgagc aaataacgcg tattcaaggt ttgacgcagc
     3781 aggcggtcga taaacccttg cgcggatatt tcggaaaaat tttgatcgaa acgcaaaacc
     3841 cagacggcat cgacacagcc tgtgccttcc aataattcga gcttggtgcg cagggggctg
     3901 atccgacacg gtggcatcct gccggtgcgg agtgcgaaaa attctttggg ttggggttcg
     3961 aaaacgacgg tcacgacggg taatccgcgc gtatcggctt cgaggcggag tttttggagg
     4021 atgtgtttgt gtccgaggtg tacgccgtca aaattgccta tggttacggc ggccccgtgc
     4081 ggaaagtcgg gcgcgttgtg ccgccccagc ctgattctca ttgttatgtt cgggtatgtg
     4141 gtgaaacagg cggtcattgt aaacggtatt gcggtttata gacagtgtgt cgcccgttac
     4201 gcccgcccga cgcgggaaaa gtaggcaaat ttcccgccgc cgaacgcgcc aaacgcataa
     4261 agcgcgcagc aggcgcggtg ctatgtgttg aaacatcgcc ccaaacctga tgcaacatca
     4321 gtgaaaatcg ttctttttta accaggtaaa ccgagacaaa caaccctccg ccgtcattcc
     4381 cgcgcaggcg ggaatccgga cctgtccgca cagaaactta tcggataaaa acagttgctc
     4441 aaaccccgag attctagatt cccactttcg tgggaatgac ggttcagttg cgttccgaca
     4501 acaccgtaat cttgaaactc gtcattcccg ctcaggcggg aatctagaac gtggaatcta
     4561 agaaaccgtt ttgcccgata agtttccgtg cggacaggtc cggattcccg cctgcgcggg
     4621 aatgacggca tttctgcggc aatcggatta tttccaaacc aaaagcgcgt ggttgcgttt
     4681 gccgcgccga aggatggtgt atttgccgaa acgtttgtgt tcgtcggtca gcaggcaggc
     4741 atcgtcgggg cgttcggcgg cgtggttggg gttgttggct tcggcaggtt tgccgttgag
     4801 caaaaccgct ttgctgttca caaagccgcg cgcttcttta ttggaggatg ccaaaccggt
     4861 tttgaccaag gcttcgacga cattgatgcc gtctgaaact tcaaatgcgg gcaggccgtc
     4921 gagtgccagc tgctcgaagt cgctttcggt caggctgctt tggtcttcgg caaacaggct
     4981 ttcggaaatg cgctgcgcgg cggcaagggc ttcttcgccg tgaatcaggc gggtcatttc
     5041 ttcggcgagg atgcgttgcg cttcgggctt gctgccgctt gcctggtctt tggcttcgac
     5101 ggcatcgatt tcttcgatgg acaggaaggt aaagtatttc aggaatttat acacatcggc
     5161 atcggcgact ttcagccaga attggtagaa ctgatagggc gaggtttttt tcgcgttcag
     5221 ccatactgcg ccgccttcgg ttttgccgaa tttggtgccg tctgatttgg taaccaaagg
     5281 cagggtcagt ccgaacactt gtttttggta caggcggcgg gtcaggtcga taccggcagt
     5341 gatgttaccc cattggtcgg agccgccgat ttccaaaacc gcgccgtggc gtttgttcaa
     5401 ctcggcgaag tcgtaacctt gcagcaggga ataggcgaac tcggtgaagg aaatgcctgc
     5461 gccgtcgcgg tcgatgcgct gtttgacgga ttctttgttc agcatggcgt tgacggagaa
     5521 atgcttgccg atgtcgcgca ggaagtcgag gcagttcatt ttgccgaacc agtcggcgtt
     5581 gttcgccata atggcggcgt ttccgccttc aaagctcaag aaaggggtta attggctgcg
     5641 gatgctttcc acccagccgg caacggtttc ggcggaattc aagctgcgtt cggcggcttt
     5701 gaagctgggg tcgccgatca taccggtcgc accgcccacc agtgcaatcg gcgtatgccc
     5761 cgcctgttgg aagcggcgca atgccaatac gggcagcagg tgtccgatgt gcaggctgtc
     5821 ggcggtcggg tcgaagccgc aataaaggga aattttttgt tcgttcaaca aagcgtctaa
     5881 ggcttcgatg tcggtggttt gcgcgattag gccgcgcgat tgcaggtctt ggatgacgct
     5941 catcggtctc tttcaaaaaa aattagcggt tttgcaaacc gccgattgta acaaatttaa
     6001 gcgaatcaat ggttatggcg cgtatcgaga aaccgttgtt tttcggaaaa acgcttcgcc
     6061 aattccgtgc cgccgtaagg gttgatgtgg tctttgtccg agtaaaccgg caatccgccg
     6121 atttggaaat ttgcggggat ataggcggcg gcatcaataa tatagacgtt ggggtatttg
     6181 gctgccaatt ccctgatgcg tgcattggct ttcagagtgc tttcgtcgtc cgggcgcagg
     6241 gtttggcggt aacccggtat gcgtgaagac aagatatagg cgcgttgtac gttgtaagac
     6301 gaggcaaggt tgtccgccat caggtaaacg gcttgttttt cggacgagag tttatgcagc
     6361 atacggtcga attttttgaa aaaaccggca tcgtaggcaa gggagcggct gttttcgggc
     6421 atttggctgc cccaccgcat cgccaaaacc acttttgaat accggggcag gtgttcttcg
     6481 gcatagcggt aaacggcgcg gcaggcggcc cagttttgga atacgcggga cgcgtagcct
     6541 tccacatagg cgcaggcgtc ggcggaaacc atagtggcag cccatttttc ttttttgccc
     6601 acggcatcga agaatgtttt gtaatggtcg gcgtgggagt cgcccaaaac cagcagttcc
     6661 ggctgttttt ccgtatcccc ccataggcat tgtttgccgg tattgttgtg gcaggaggtg
     6721 ttggaacgcg tcagccccaa gcggtcgtat tgcgccataa acggcagcct catcgcaaaa
     6781 aatgagcccg cccccaaaat gagcataggc aaggcataaa tccataaaac ggattgtgcg
     6841 aacgaacctt gccatttttt aaacggtttt tcgatgcagt ggtaagaaaa cagggaaagc
     6901 agcaatatca ggacgaccgc cgccgccggc gaataaggcg gcaggttgtc cgggccgata
     6961 tagcgcataa aggccaatat cggccaatgc cacagataaa gcgaatagga aatcaaaccg
     7021 gcggcaacgg tgattttcca ttggaaaaat tttttaagcg ggtgttcgta atgattgaaa
     7081 taaatcagcg cggcaacagc cagacaggga atcaaagcgg cgggccctgg gaaataggcg
     7141 gtttgttccg aataggcaaa caggcaggcg gacagtatgc acgcggaaaa caatgcgccg
     7201 gcggcggcac agcatctgcc gacggcgaga ttccgctgtt gccggtaccg catccacacg
     7261 gcggtcagcg atccgaccag catttcgcag gcgcgcaggt ggggcaggta atatttatcg
     7321 aacgcggaag gcataaagga agcggcaagg cttaaggcgc acaatgcggc gaggaagccg
     7381 aactgtacgc gcgggctttt gcgggcgaca agcagcagca atatcggaaa gacaaagtaa
     7441 aattgttctt cgaccgacaa agaccaaatg tgcagcaagg gcttttcttc ctgcgcggga
     7501 tcgaaataat ccttccccct tgcaaaatac aggttggagg cgaaacccaa ggcggtcagc
     7561 gcggatttcc acaaaagaaa gaaatcatct ttggtgaata aaaagaagcc gcctgccagc
     7621 gttgccgcca atacggcgaa aaatgcgggc aaaatccgtt tgatgcggcg gatataaaat
     7681 gccttcaggg aaaacctccc cccccccgac atttcgcgaa ggaggatcgc cgtcatcaaa
     7741 aagcctgaaa tcacaaagaa tatatcgaca ccgagaaatc cgcccggcag ccaatttttt
     7801 tcgatatgga acacgatgac ggacaaaacg gcggcggcgc gcaatgtgtc gatgtccggg
     7861 cggtagggta aggcttggct cataatgttt ttatagtgga ttaaatttaa accagtacgg
     7921 cgttgcctcg ccttgccgta ctatctgtac tgtctgcggt ttcgtcgcct tgtcctgatt
     7981 taaagttaat ccactatact cgaaacgcgg cggcgcaaat gccgtctgaa aggtcatttt
     8041 gtacgggata ttcggaatgc cggacggctt tttgcaacag cggggcaggc ggtttgtttt
     8101 gcaggaatcg gggagggcaa atcggaaatg cgggtgggat tttattttga tgcagccgca
     8161 ttccggcggt atggaaacgc cgaaaaccac caaaaccggc ttcagacggc atttctggca
     8221 aagccgtctg aaaacctgcc gcatttgggt tacacgttaa acaaaaagtg catcacatcc
     8281 ccatcctgca cgacgtattc tttgccttcc acacgcattt tgccggcttc tttggctttg
     8341 gcttcgccgc cgagcgagac aaaatcatcg taggcaatca cttgggcgcg gatgaagccg
     8401 cgttcaaaat ccgtatgaat cacgccggcg gcttgcgggg cggtgtcgcc tttgtgtatc
     8461 gtccacgcgc ggacttcttt cacgccggcg gtgaagtagg tttgcaggcc caagaggtcg
     8521 tagccggcgc ggatcaggcg gttcaggccg ggttcttcca aacccatttc ggcgaggaat
     8581 tcggcttttt cgtcgtcttc caattcggcg atttcgcttt ccatcgcggc gcatacggcg
     8641 acgacggggg cgttttcttt tgccgccaat tctttcaggc ggtcgaggtg cggattgttt
     8701 tcaaaaccgt cttcggcgac gttgcccaca tacatcgcag gtttggctgt cagcaggaac
     8761 agcggtttga gcatcgcgcg ttcttccgcg tccaaaccga aggaacgcac gggtttgcct
     8821 tcgtccagat gcggcagcag ttttttgcac aaatcgacca gcttttgcgc gtctttgtcg
     8881 cctgaacggg cgcgtttttc ttcgcggacg atggcttttt ccacacttgc caggtcggca
     8941 agtgccaact ctgtgccgat ggtttcgatg tcggcaatcg gatcgacgcg gcctgcaacg
     9001 tggacgatgt tgtcgtcgtc aaagcagcgc acgacattca caatcgcatc ggtttcgcgg
     9061 atgttggcaa ggaactggtt gcccaagccc tcgcctttgc tcgcgcctgc aaccaaaccg
     9121 gcaatatcga caaattcgac gatggcaggc tgcatttttt gcggattgac gatttttgcc
     9181 aattcggcca tacgcggatc ggggacttcg acgatgccga cgttgggttc gatggtacag
     9241 aaaggatagt ttgccgcttc gatacccgat tgggtcagcg cgttaaaaag ggtggatttg
     9301 ccgacgttgg gcaaaccgac gatgccgcat ttcaaactca tgttttttcc tgaaaataga
     9361 gaaatttaac ggcggattat agcataccgc cgcccgcgtt ccgaaaaaat gccgtctgaa
     9421 acggcttcag acggcatctg gtttcaaaaa ccgttcagaa caagccgtga atcacgcctt
     9481 ctgcgtccac gtcgattttc tcggcggcgg gaactttggg cagacccggc attttcatca
     9541 tattgccgca caacgcaacg atgaaaccag caccggaaga aacggtaatg ccgcgcacgg
     9601 taatgcggaa gccttcaggg cagcccaaga gtttggcgtt gtcgctcaaa gaatattggg
     9661 ttttcgccat gcaaatcggc attttgtcca agcccagttt ttccagcgag gcgatttcgg
     9721 cagacgcttc cgcgctgaaa tcaacatctt ccgcgccgta cactttttgg gcaatcgcac
     9781 ggattttgtc tttaatactc agctcaacat cgtaggaaaa attgaagttg ttcggttggt
     9841 tttcgatggc gttgacgact ttgcgcgcca agtctgcacc gcccacgccg cctttgcccc
     9901 acacttcggt caaggaaact tcaacgccgt gttcggcaca ggctttttca atcatcgcca
     9961 actcggcatc ggagtcggac acgaagcggt tgagcgcaac gacgacgggc agtccgaata
    10021 cgtttttcag gttggaaatg tgtttcagca ggttgggcaa accttttgcc aaggcttcga
    10081 ggttttcttc accgaggttg gcacgttcca cgccgccgtt gtatttcaaa gcgcggacag
    10141 tcgccacgac gaccgccgca tcaggtttca aaccggcaag gcggcatttg atgtcgcaga
    10201 atttttccgc gcccaaatcc gcgccgaagc ctgcttcggt tacggcgtaa tcggcaaggt
    10261 gtttcgccag acgggttgcg gttacggagt tgcagccgtg ggcgatgttg gcgaacgggc
    10321 cgccgtgtac gaaggcgggc gtgccttcga tggtttgcac caaattgggc ttaatcgcat
    10381 ctttgagcag gaccgccatc gcgccgtgtg ccttcaaatc tttggcgtaa acggggctgc
    10441 cgtctttggc gtaggcgaca aggatgttgc ccaaacgctc tttcaaatcg ctgatgtctt
    10501 tggcaaggca gaataccgcc atcacttcgg aagcaacggt aatgtcgaaa ccgtcaggac
    10561 gcatcacgcc gtcaacaggt ttacccatgc cgtcgatgat gttgcgcaac tggcggtcgt
    10621 tcatatcgac cacgcgccgc cacagcacgc gtttcggatc gatgttcaac tcgttgcctt
    10681 ggtagatatg gttatcgagc atggcggcga gcaggttatt cgccgcaccg atggcgtgga
    10741 agtcgccggt aaagtgcaga ttgatgtctt ccatcggcaa aacttgggca tagccgccgc
    10801 ctgccgcgcc gcctttcacg ccgaacaccg gccccagaga aggttcgcgc agggcaatca
    10861 cggcatcttt gccgatgtgg cgcaacgcgt ccgccaaacc gatggttacg gtggttttgc
    10921 cttcgcccgc cggagtcggg ttgatggcgg taaccaaaat cagcctgccc tgtttttgcg
    10981 gcagtttgaa cgcttcggca ggattgattt tcgccttgta atgaccgtaa ggctcaatgt
    11041 tgtcaacgtt cagacccagc ttggcggcaa tttcgccaat cgggcgcatc gtggaggatt
    11101 gggcgatttc ggcatcggtt ttgaagctca tgattttcct ttagaaatga ggagggacat
    11161 accgtctgaa agcatcaggc gacaaacagg tggattgaaa ataatatcag gcatattata
    11221 acgttatccg caccaaaccc gcagtgaaat ttttgacgca gcaacaaaaa taccgttcat
    11281 attgttcaca atccaaggag aaaacatgag cagcaacgca tggctgtttt gggcattggc
    11341 atcggcaggc ttcgcctcat tgaccgccat cttcgccaaa atgggtttac agggtataga
    11401 ttcagatttc gctaccttca tccgcacctt ggtcatcctc gccgctttgt tattgttttt
    11461 gacctacacc ggcaaatggc agggcgtgaa cggatttaca ggaaaaaact ggacattctt
    11521 aattctgtcg ggtttggcga ccggcgcatc ctggctcgcc tacttcaaag ccctgcaact
    11581 gggcaacgcc tcgcaagtcg cgcccgtcga caaattcagc ctggtcctgg tcgccctgat
    11641 ggcggtggtc tttttggacg aacgcccgaa cacgcaggaa tggataggct tgggactggt
    11701 aacggcgggc gtgttggtgc tggcgttgaa acgttaaacc gaatccgcca taccgcctga
    11761 aaccgggttt tgacaatctg acgggcggcg gtctgaacaa agttacccaa taaaatccga
    11821 caccgcgccg acggcaaacc gccgcgcttc agatggcatt tgttggacgg aaagccccga
    11881 acgccctatt ttcacgcctc cacgaaaata tgccggacat ccggtcggaa ccgttcggca
    11941 gccggctcgg caagccaccg ttttatttca cttccaagcc cctgcaaggg cttgagcctc
    12001 tttcagacgg cataccgtgc cgacatccag ccacaagccc gtatgcttct gaccgctcac
    12061 gcggttttgc cgcatttcgc cacgcaatac gggcgcgagt ttcgccacac tgcccgcttc
    12121 gattccgtca aacatttcag gacggtaaat acccacgccg ctgaatgtca atccgttgcc
    12181 gccatttact tccggccgca cgctgccgtc gggcagcagg gaaaaatcgc cgtcggggtt
    12241 gtgcggcgga ttttccacca gccacagatg ggcggaaata tgttccggca gggacgatgc
    12301 cgcctgaaac gcggcggtaa aatcgatgtc ggtcagcacg tcgccgttga ccaccaaaaa
    12361 cggctgccca cccaacagcg gcaatgcctg cgcgatgccg cctgccgttt ccaaaccgcc
    12421 tgcgggttcg ggcgaatagg cgatgttcac gccataagcc gagccgtcgc ccaaagcatc
    12481 ttctatctgc cggcccagcc aagcgtggtt gatgacgatt tcggtaaacc ccgcctgctt
    12541 cagacggcat aggtgccaac cgattagagg cttacccgcc acatcgagca gcggcttcgg
    12601 agtggtatcg gtcaaagggc gcatacgctc gccgcgtcct gccgccagta tcatcgcttt
    12661 catatatctg tccgaatatc agtctaaaaa tctaaactgc cgtctgaaat acagcagcgc
    12721 ggggcgtttg cacccgcagt ttttgatttc gtcgagcctg acgtaaaaca caaaatgcgt
    12781 gccgatttca tgtttgccga caatatgccc gtgcaggtgc gccaacgcgc cctctatttc
    12841 aagttgtccc gttttgccgc gatgccagat gtggtaggca aaccgctctt cgggcgacag
    12901 cccggtcagc ccggcaaaat gttcggcaac atcctgatgt tcgtccgcca gcgtattgat
    12961 gcagaggctg ccgttttccg acaggatcgg aatgattcgc gcactccggt tgatgcacag
    13021 catcacggtc ggcggctcgt ccgtaaccgg tgtaaccgcc gtcattgtaa tgccgtaacg
    13081 ccctgccgca ccgtctgtcg tgatgacatg aacgcctgcc gcacaagatg ccatcgcatc
    13141 acggaacgaa gtttgaaaag ttttctgcaa atccgccatt tttccccttt aaactgtccc
    13201 ctatataaga atgctgcaca caaggcaccc cccatgtgca gcagttttga ttcaaaaagc
    13261 cgtcggtcgg acgtttccgc gcgttacggc gtattacgag ttcaacgcat cctcgatttt
    13321 ggcaagttct gccaacaggt ctttaagcag cagcattttc tcgcggccca gcacttcctc
    13381 gatagcgtcg taacgctcgt ccacttcttc gccgatttcc tcatacagct tctcgccctc
    13441 ggcagtcagc ttcagaaaaa cgcggcgttg gtcgttggaa ggtttcaggc ggacaaccaa
    13501 acccgctttt tcaaggcggg tcaggatacc ggtcaggctg gggcgcagaa tacacgcctg
    13561 attcgccaaa tcttgaaagt ccagcgtgcc gttttccgcc aaaagacgga taatccgcca
    13621 ttgctgatcg gtaatattcg cctgattcag aataggcctg aattgggtca tcagggcttc
    13681 ccttgcctgt atcagactga tattgataga cgcatgtttt gattgggtag gcattgttca
    13741 agtctccaag ttatcgaaaa tcaaactttc aaaccgtcgg gaaagcctgt gggcgtaaat
    13801 tttgatgcaa ccgttatata acaaaacgaa catatagcaa caatacgcta taaaccgcat
    13861 cggacgactg ggtataaaag actttaattc cgataatcct atctaaaaat attttaatag
    13921 ttatatctta gtctattttc cctacaatct caacaaagta ttacatttac tgtcgaaaga
    13981 actttcttcc agaaaaaaca aaagccgccg catcagacga gcaaggtata tgccgtttga
    14041 ttctctacat agcgtaaagt ttaacaaaaa caaaagttaa ccgaaaacat ccgcctgaaa
    14101 aattcgtgcg cgcaagcccc aataactgct gattcccgtc gtatagtgaa ccattttccc
    14161 atttttgacc aaaacgacgg caggcgttgc gacaatccgc caagaccttg ccaaaccccc
    14221 gtcctcatcg ttgaccgtcg gaaagcccaa gccccgcttt gccatatacg ccgccacttc
    14281 ggacgcgctg ccggaacgta ccgccacgcc gacgaccggc acgccgtccg ccgccaaatc
    14341 atcgattatc ggcgactgat aacggcacac gccgcaccag ctcccccaaa aatacaccaa
    14401 aaccgcctta tcccggctaa actgtcccaa agtcagccgc tgccccgaca gcagggtcaa
    14461 aggccgccct gccgcaccgg ccggctcttc gggcttgcgt acccaatcca aaaacagcga
    14521 caccaataaa aacaccaatg ccgtctgaac ggcaaatttg atgcccgaaa gcagtttctt
    14581 tttcatacgc tctctcaaac ggtacgcccg cgcaaccggc aggcaaacaa aaagccaagt
    14641 ctcaaaactt ggcttccggt tatctggtgg gtcgtgagcg attcgaacgc tcgaccaacg
    14701 gattaaaagt ccgctgctct accgactgag ctaacgaccc gataagccgt gcattataca
    14761 gcaccatcct acctcgtcaa gcaaatttta caggcttaat tgcagaccac tgtttgcacg
    14821 ggatattttg acaacggatt ttcacaatcc gccgcatacc gtgtaaaagt tcgcacaagg
    14881 aaaagcaaac cgcccgaaat caatgtacac tttccgcccg tttcccaaac tgcacacaga
    14941 aacacacatt atgaacatac aaaacatccg caccctcctc gacaccgtcg ccgttccgaa
    15001 tacggcacgc acgctcggcg gcgaaaaggc cgtccgttcg gtcgaacagc attcagacgg
    15061 catccatatc gccctgcatt tcggcttccc tgtcgcgcac atcgccgccg ccatcgccga
    15121 ttccgtacaa gaaaccctga tgcccgaaac aggcgacaca cacatccatc tgtccatgga
    15181 cactgaaatc ggcacacaca aagtccagcc cggcgttacc accatcaaag gcgtgaaaaa
    15241 catcatcgcc gtcgcatcgg gaaaaggcgg cgtgggcaaa tcaacaacca ccgccaacct
    15301 tgccgccgca atggcgcgca tgggcgcgcg cgtcggcgtg ctcgatgccg acctttacgg
    15361 cccgagccaa ccgaccatgt tgggtgtgga cgaccgcaaa cccgatcaga aaaaccaaaa
    15421 actcattccc gtcgaatctt caggcggcat acaggttatg tccatcggct ttctagtcga
    15481 taccggccaa gccgtcgtct ggcgcgggcc gatggtcagc caagccttgc agcaactgat
    15541 gttccaaagc gagtgggacg aagtggacta tcttttcatc gacctgcccc ccggcacggg
    15601 cgacatccaa ctcacgctgt cccagcgcat ccccgttacc gggtccgtca tcgtaaccac
    15661 gccgcaggac atcgccctga tagacgcgcg caaagccgtg gatatgttcc gcaaagtcaa
    15721 cattcccatt ttgggcgtat tggaaaatat gtccgtccac atctgctcca actgcgggca
    15781 tagcgaagca ctgttcggca cggacggcgg caaagatttg gcggcacgcc tcaacgtccc
    15841 cctgctcgga cagcttcccc taagcctgcc cgtgcgcgaa gccatggacg gaggggcggc
    15901 ggcacaactg ttcgacaagc accccgccat cgcccgaatc tacaccgatg ccgcattcca
    15961 aatcgccctg agcattgccg acaaaggcaa agacttcagc agccggttcc ctaaaattgt
    16021 cgtcgaataa agccgcgtcc gaaaccgcaa cagcaatgcc gtcccaagcc ccgcgcctgc
    16081 cgatatgccg tcattcccgc gcaggcggga atccaggtct gtcggcgcag aaacttatcg
    16141 gataaaacgg tttcttgaga ttttacgttc tagattccca ctttcgtggg aatgacggaa
    16201 tgtaggtttg cgggaatgac ggtttaggta tttttatagc aagccgtagg gtgggatgcc
    16261 gccggagggc atcatattct tggaatagcg cattaaaaag agtatgataa tggaaacaca
    16321 aaagattccg gcaatgcccg tgcgccgttc ccgtccgtca ttcccgcgca ggcgggaatc
    16381 cagacctgtc ggaacggaaa cttatcggat aaacggtttc tctagattcc gcatcct
//
LOCUS       DAWEYF010000031        14941 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.031, whole genome shotgun sequence.
ACCESSION   DAWEYF010000031 DAWEYF010000000
VERSION     DAWEYF010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14941
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.031"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(1..682)
                     /locus_tag="WGN93_000720"
                     /pseudo
     CDS             complement(1..682)
                     /locus_tag="WGN93_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244588.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
     gene            complement(768..1190)
                     /locus_tag="WGN93_000721"
     CDS             complement(768..1190)
                     /locus_tag="WGN93_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226651.1"
                     /translation="MEWVSLFSDPQRDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITPGKNDNGNLTVNGIYGIQSFADSQLGYTPELLVKSNNDILFKNNLQSVDVKPHS
                     GNIHLDAKGKIQFNLNVPDVDGVQDVASGKKYRQTIVP"
     gene            1502..2812
                     /locus_tag="WGN93_000722"
     CDS             1502..2812
                     /locus_tag="WGN93_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ0226652.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDGLKKLVAKVLALPEYRDFTIEADAQELFVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            2926..5931
                     /locus_tag="WGN93_000723"
     CDS             2926..5931
                     /locus_tag="WGN93_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ0226653.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKPTNIFPKI
                     FIESLCRINPDLSPDDARRLLTDIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEEFRPDITLLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     SKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAEL
                     LNTLSDGLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKHGIVPKFYFIVDRLDLLKQAQREFTARDLIVHTIDSREAFAADIKSAQTLHN
                     HSGKPEITVVNIQKFKDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     INAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREEIGSRYK
                     AQLQEALAQLEIEKGSIDRKEIYAHPHFVHPMLDYILDDFAKFRKTNQDDSLGAMVVC
                     DSSEQARQLFEHFQTASNHNLTAVLILHDIGTKEERDQWVKDFKAGKIDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIQSEFDKTNRAY
                     WDELSNELGDEIGNYSQLFKTTEEIEQEIAGIKDALFEFDRENAEVFRHQIEQIADKK
                     QLLALKKALQTARELYNVLRLQGSHEFLECLDFDKLNLLYREAVSRLDTLNIIEKQQQ
                     GNIAHLLNEALEDIYFQFVKISEAELKLADDLKDIMRKVREGLAGNIDQDDPEYISLR
                     EELERIFKKKNLAEVGQEEMQANIATLDTVYAQIKELNRKNDLLRHKYGGDTKYARIH
                     KRLLENPALYGDKLKVFNALNGVKTDADQKVLDMEQILDNQNYFEKQMQGIVLKRFRT
                     EQQFPVQPADIQAINRLLVREYLKESGRI"
     gene            6061..7296
                     /locus_tag="WGN93_000724"
     CDS             6061..7296
                     /locus_tag="WGN93_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ0226654.1"
                     /translation="MIEKRLIDISKNISSGITPLRSNDEFWTDGTIPWLKTEQLGEKY
                     IFDTNEYITEKALQEANVKIFPENTLSIAMYGEGKTRGNVSILKRPMATNQACCNIEL
                     DEEKVSSEYVYYFLKTQYENLRGLSSGIRKNLNTNDIKNFVVRLPENLKTQQSIAAVL
                     SALDKKIALNKQINARLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGEMVFDETLKRE
                     IPKGWEVKSLWKIAKYFNGLALQKYRPENELDDFLPVIKIREMNEGVSSNTERAKTNI
                     PKEAIIDDGDILFSWSATLEIKIWSQGKGALNQHIFKVTSSEYPKYFFYFELLNYLKH
                     FKMIADLRKTTMGHITQDHLKQAYICIPSQPLLEKLEKIVTPIFQKILITQKQNHQLT
                     QLRDFLLPMLMNGQVSVAE"
     gene            7345..8946
                     /locus_tag="WGN93_000725"
     CDS             7345..8946
                     /locus_tag="WGN93_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ0226655.1"
                     /translation="MTEQHFTEQTKALIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKKIRKENPDEEIEFINMDIEGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEV
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPEEVRGQIRSVD
                     VYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNLLRLNLILNNLVHSLNNVVQG
                     NTILSPYHKDASGRLKKFDFIVSNPPFKLDFSDFRDQLESDENRERFFAGIPKIKAKD
                     KDKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAQSGIDKKIREYLVENKMLAGVVS
                     MPSNIFATTGTNVSILFIDKANKDNVVLIDASGLGEKIKDGKNQKTVLSREEEQKICN
                     TFTHKQAVEDFSVVVGYDEIKAKNYSLSAGQYFEVKIDYVDISAEEFEQKMAGFSADL
                     DKLFAESAELEKEIKDRLAMLKFNS"
     gene            complement(9042..10379)
                     /gene="ribB"
                     /locus_tag="WGN93_000726"
     CDS             complement(9042..10379)
                     /gene="ribB"
                     /locus_tag="WGN93_000726"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ0226656.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(10593..11606)
                     /locus_tag="WGN93_000727"
     CDS             complement(10593..11606)
                     /locus_tag="WGN93_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ0226657.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFTDYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGILFDLQQLADKKVDLILHPSSLNYHVIPKGADFSDNDFVRHFETLVEGRYYIANA
                     WTKIVRREIIIKNNLFFPKGYIHEDFPYNLQLARFIKTFAFYDNPFYQYRVLGGSISH
                     NIKYKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNII
                     VIYRKYFSFKEKCRKIFGAKAIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKF
                     FSE"
     gene            complement(11762..12355)
                     /gene="ribA"
                     /locus_tag="WGN93_000728"
     CDS             complement(11762..12355)
                     /gene="ribA"
                     /locus_tag="WGN93_000728"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ0226658.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(12348..13025)
                     /locus_tag="WGN93_000729"
     CDS             complement(12348..13025)
                     /locus_tag="WGN93_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226659.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGTASIDRSV
                     LWRSDEDWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            13179..13263
                     /locus_tag="WGN93_000730"
     tRNA            13179..13263
                     /locus_tag="WGN93_000730"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13213..13215,aa:Leu,seq:tag)
     gene            13783..14817
                     /gene="purM"
                     /locus_tag="WGN93_000731"
     CDS             13783..14817
                     /gene="purM"
                     /locus_tag="WGN93_000731"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ0226660.1"
                     /translation="MSISLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT         4049 a         3595 c         3560 g         3737 t
ORIGIN      
        1 cgcaaatgcc gttttgtaca attccaaaag ttttcaattc cgttaatgcg attttgccgt
       61 ttggcgaaat gcgtactgtt ccagtcgtgg attgaacccc caccctgtat agttctttcg
      121 aagcattggg gtattgtttt ttcaaagcat cgattaaagc cgtattggtg tccggatttt
      181 taacctggac aatattgtcc ccttcggctt caagcgttgc ttttgcagaa tgcgacgcga
      241 taatgccttt tacggaggcg tggtttttta catttaaatc aacttcatta tttcccttga
      301 cggctttgag cttgatagtg ctgatgccat caagggaagg ttgggtaagg tcgcttgatt
      361 gattattgat gaaaatgccc gtcgtgcgtc cggaataggg ggagttggac tggagaccat
      421 ttacgcccaa tcccaagccc ttgccctcag tggcgatgga tattttattg ttattccccg
      481 ttaatacggt attggattta aaagccgttt caatgcccct taaaaaactt gtactctcaa
      541 catttcctgt cggcataggg tcggcgagtt cccctttaat ctcaatcaca ttatcgctgt
      601 cttcggcagt cagatgaaca tcggtattgt tgaggttgtg aataccgaaa tggtgtgtgt
      661 ctttatgaac gttaacgttc atattgaaca aattgcctgt ttttgaatga aaggatatgc
      721 tgcctttgtc attttcatcg gggggctgat agtgttgaca taccgcacta aggcactatt
      781 gtttgtcggt atttttttcc actggctaca tcttgtaccc catcaacatc gggaacattc
      841 aaattaaatt gaatttttcc tttggcatcc aaatggatat ttccggaatg gggcttcacg
      901 tcaacagatt ggagattatt tttaaataga atatcattat tgctttttac caataattca
      961 ggcgtatatc ccaattgaga gtctgcaaaa gattggatgc cgtaaattcc atttaccgtt
     1021 aaatttccat tatcattttt accaggggta ataagttcta attttctaaa gttttcacct
     1081 tttttccacc aaggcacaat atagtttttt acagtgattt tttcatcttt aagggttata
     1141 agactatcat cgtctctttg cggatcagaa aataaagaca cccattccat ctcttgaata
     1201 ttagtatatt catgggcttc cgcctcaaaa cataatgccg attgaatcaa caaagcaatg
     1261 gcagataaag caaattttct attttagtct ccttaatgtt taattgaaac gctgatttgg
     1321 gtattgtcat gccgatgcgg aatcggtctc cgtgccggat atattgtgtg aagtctctcg
     1381 tcttttccag tatgcgccta atatcggctt aaggcaaacg gaggggcgga atccgtatgc
     1441 ggcacgccgc cgttccctgc cgtataatca tattgtttga aaacctgttg acggagccgt
     1501 tatgaccgat ttgtttgccc gagaacccga cgcgccgctt gccgaacgat tgcgtccgca
     1561 tacgcttgac gacgtggtgg ggcaggaaca cctcatcggc gaaggtaaac ctttgcgcgt
     1621 ggcggtagaa ggcggcaagc cgcattctat gttgctgtgg gggccgccgg gcgtgggcaa
     1681 gacgacgttg gcgcggattt tggcgcagag tttcaatgcc cagtttttgc ctgtttccgc
     1741 cgtgttttcc ggcgtgaagg acatccgcga ggcaatcgat aaagccgaaa tcgctttgca
     1801 gcagggacgc gcgacgattt tgtttgtcga tgaagtccac cgcttcaaca aggcgcagca
     1861 ggacgcgttt ttgccgcatg tcgaaagcgg tttgctaacc tttattggtg cgacgacgga
     1921 aaatccgtcg tttgaagtca atcccgcgct gttgagccgc gcgcaggtgt atgttttgca
     1981 gcccttgtct tcagacggcc tcaaaaagct ggttgccaaa gttttggctt tgcccgaata
     2041 ccgggatttc acgattgaag ccgacgcgca ggagctgttc gtcaataccg ccgacggtga
     2101 tgcgcgcaga ttgttgaatt tgttggaaca acttttacgc gccgccgata cacgtcgtct
     2161 gaaaaactta accgccgaat ttctcgccga cagtctcggg gcgcaaatcc gccgtttcga
     2221 caaaggcggc gagagcttct acaaccaaat ctccgccctg cacaaatccg tgcgcggttc
     2281 gcatccgaac gccgcgctgt attggttctg ccgtatgctc gacggcggca ccgacccgcg
     2341 ctacctcgcc cgccgcatcg tgcgtatcgc ttgggaagac atcgggcttg ccgacccgcg
     2401 cgccttccaa atcgccaacg atgccgccgc caccttcgaa cgcttaggct cgcccgaagg
     2461 cgaactggct ttggctcaag ccgtgctgta ccttgctgcc gccgccaaat ccaacgcggg
     2521 ctacaaggca tacaaccaaa tgcgccactt cgtcaaagaa aacgccagcg acgaagtgcc
     2581 cgtccacctg cgcaacgccc cgaccaagct gatgaaggaa ttgggctacg gacgcgaata
     2641 ccgctacgcc cacgacgaac cgaacgccta cgccgccggc gaaagctata tgcccgacgg
     2701 tttggacgaa ccggacttct accaacccgt cccgcgcggg ttggaaatca aaatcggcga
     2761 aaagctggaa tggttgaaat cgctggacga agaagtatta aaggcaaaat gaagcaatgc
     2821 tgtctgaagc agaacagtat ggcaaagccg gtacaccgaa aaggcgtatc gggtttttca
     2881 ggtgttataa tccgtttcaa taaattttga tgaatcatta cgtttatgtc ccaaactcac
     2941 aacgaaaatt cccgcgtcaa aatccccgcc gttttgcacc tgatgcgctt gggctacgac
     3001 tacctctcgc tcaaaaacga aaattgggat aaaccaacca acatctttcc caaaatcttt
     3061 atagaaagcc tctgccgcat caatcccgat ttgtcgccgg acgatgcacg ccgtttgctg
     3121 accgacatac gcttagaact ggacaacgaa gacttggggc aaaagtttta cgaacgcctt
     3181 accaatcaat ccggcggcaa gaaactgatc gacttccaaa attttgataa caacagcttc
     3241 cacgttgtaa ccgaattgcc ctgtatcaac ggcgatgaag aattccgccc cgacattacc
     3301 ctgctggtaa acggcatgcc tttggttttt atcgaagtca aaaagcccaa caacaaaggc
     3361 ggaatcggcg aagagcggga gcgcatgggc aaacgtgcga aaaattccaa atttcgccgt
     3421 ttcatcaaca tcacccaatt catgattttt tccaacaaca tggaatacga cgacggcgca
     3481 accgaaccgg cacaaggcgc gttttacgct tcgtctgctt acggtaagcc cgtgtttaac
     3541 tacttccgcg aagaacataa attaaatctt gccgaattat tgaacacgct ttcagacggc
     3601 ctcgaaaaca acgtcctgca agacaacaac ctgcccgtta tcaaacacag ccccgaattt
     3661 atcagcaata aatcgcccga tacgccgacc aaccgcatcc tgacttcgct gctttgccgc
     3721 gaacgtcttt cttttcttct gcaacacggg ctgacttacg tcaaagcaag tcaaggcttg
     3781 gtgcaaaaac acatcatgcg gtatccgcag ctatttgcca ctctcgccat tgaaaaacat
     3841 ttggcaaacg gcggcaaaaa aggcgtgatt tggcataccc aaggctcggg taaaaccgcg
     3901 cttgcctatt acaatacccg ctacctgaca cactattacg ccaaacatgg catcgtgccg
     3961 aaattctatt tcatcgtgga caggctcgat ttattgaaac aggcgcagag ggaatttacc
     4021 gcccgagact taatcgtcca taccatcgat agccgcgaag ccttcgctgc cgacattaaa
     4081 tccgcccaaa ccctgcacaa ccactcaggc aaaccggaaa tcaccgtcgt caacatccaa
     4141 aaattcaaag acgatcccga tgtcgtcgct cgcaacgact acgaccttgc catccagcgc
     4201 gtctattttc ttgatgaagt acaccgcagc tacaacccca aaggctcgtt tcttgccaac
     4261 ctcaaccagt cagacataaa cgccgtcaaa attgggctga ccggcacgcc gcttatcggt
     4321 gtaaccgcag gcaacgtcaa cactcgcgag cttttcggcg actacatcca caaatactat
     4381 tacaacgcct ccatcgccga tggctacacc ctgcgcctga ttcgcgaaga aatcggcagc
     4441 cgatacaaag cccaattaca agaagcactg gcgcaacttg aaatcgaaaa gggcagcatt
     4501 gaccgcaaag aaatctacgc ccatccgcac ttcgtccacc cgatgcttga ctacatcttg
     4561 gacgactttg ccaaattcag aaaaaccaac caagacgaca gcctcggcgc catggtcgtt
     4621 tgcgacagct cagagcaggc acgccagctt tttgagcatt ttcagacggc ctcaaaccac
     4681 aatctgaccg ccgtgctgat attgcacgat atcggcacca aagaagaacg cgaccaatgg
     4741 gttaaagact tcaaagcagg caaaatcgac atcctgtttg tgtacaacat gcttttgacc
     4801 ggctttgacg cgccgcgcct gaaaaagctc tacttaggca gactcatcaa agcccacaat
     4861 cttttgcaaa ccctgacccg cgtcaaccgc acctacaaat cataccgtta cggctatgtt
     4921 gtcgattttg ccgacatcca aagcgaattt gacaaaacca accgcgccta ttgggatgaa
     4981 ctgtccaacg aattgggcga cgaaatcggc aattacagcc agcttttcaa aaccaccgaa
     5041 gaaatcgaac aagaaattgc aggcattaaa gatgccctgt ttgaatttga tagagaaaac
     5101 gccgaagtat ttcgtcatca aatcgaacaa atagcagata aaaaacaact tcttgccctg
     5161 aaaaaagccc tgcaaaccgc cagagagctg tacaacgtcc tgcgcctgca aggcagccat
     5221 gagtttctcg agtgtctgga ttttgacaaa ctcaatcttt tatatcgtga agctgtttca
     5281 cgcttagata ccttaaacat tattgaaaaa cagcaacaag gcaatatcgc ccatttgctc
     5341 aatgaagcat tggaagacat ttacttccaa ttcgtcaaaa tcagcgaagc cgagctcaag
     5401 cttgccgacg atttgaaaga catcatgcgc aaagtgcgcg aagggctggc aggcaatatt
     5461 gaccaagacg accccgaata catcagcctg cgcgaagagc tggaacgcat cttcaagaaa
     5521 aagaacctcg ccgaagtcgg gcaggaagaa atgcaggcaa acatcgctac gctcgatact
     5581 gtctatgccc aaatcaaaga gctgaaccgc aaaaacgatc tcttgcggca caaatacggc
     5641 ggcgacacca aatacgcccg catccacaaa cgcttgctgg aaaatcccgc cctctacggc
     5701 gacaaactta aagtcttcaa cgcgctaaac ggcgtcaaaa ccgatgccga ccaaaaagtg
     5761 ctggatatgg agcagatttt ggataaccaa aattactttg aaaaacaaat gcagggcatc
     5821 gtattaaaac gctttaggac ggaacagcaa tttcccgttc agcccgccga catccaagcc
     5881 atcaaccgcc tgttggtgcg ggaatattta aaagaaagcg ggcggatttg aggaagcggt
     5941 ttttcaggca gcctttacgg gcgtattgca tacgttcgga atgggcaata aaagtgcggt
     6001 cagatttggg aatgtttttt cagacggcct ttaaagagtt tcaaaagatg aagttttaag
     6061 atgatagaaa aacggttaat tgatatttca aaaaatattt caagtggcat aacaccattg
     6121 cgaagtaatg atgaattttg gactgacgga acaatccctt ggttaaaaac agagcaactt
     6181 ggtgaaaagt atatttttga tacaaatgaa tatattacgg aaaaagcttt gcaagaagca
     6241 aatgtgaaaa tttttcctga aaatacacta tctattgcaa tgtatggaga aggcaaaact
     6301 cgaggtaacg tttcgatatt gaagcgaccg atggctacta atcaagcctg ctgcaatatc
     6361 gaactggatg aggagaaagt aagctcagaa tatgtgtatt attttttaaa gacacagtat
     6421 gaaaatttaa gagggttgtc ttcaggtatc agaaaaaacc taaatacaaa cgatattaaa
     6481 aattttgttg tcaggctgcc tgaaaacctc aaaacccaac aatccatcgc cgccgtctta
     6541 tccgctttgg acaaaaaaat cgccctgaac aaacaaatca acgctcgctt ggaagagatg
     6601 gcgaaaaccc tgtacgacta ctggtttgtg cagtttgatt tccccgacgc caacggcaaa
     6661 ccctacaaat cctcaggcgg cgaaatggta tttgacgaaa ccttgaaacg ggaaattccg
     6721 aaggggtggg aggtgaagag tttatggaaa atagcaaagt attttaacgg attagctttg
     6781 caaaaatatc gtcctgaaaa tgaactcgat gattttttgc cagttattaa aatcagagaa
     6841 atgaatgaag gtgtttcttc aaacactgaa agagctaaaa caaatatccc aaaagaagca
     6901 attattgatg atggggatat tttattttct tggtctgcga ctttagaaat caaaatttgg
     6961 tctcaaggta aaggggcttt aaatcaacat atttttaaag taacttcttc cgaatatcca
     7021 aaatactttt tttattttga attattaaac tatttgaagc attttaaaat gattgctgat
     7081 ttaagaaaaa cgacgatggg acatattacc caagaccatt tgaagcaagc gtatatctgt
     7141 attccttctc aaccattgtt agaaaaattg gaaaaaattg ttactcctat ttttcaaaaa
     7201 atattaataa ctcaaaaaca aaaccaccaa ctaacccaac tacgcgattt cctactgcct
     7261 atgctgatga acgggcaggt atctgtggcg gaataagcca gattcgagaa tcggacctac
     7321 aaaataaaac aaacgagata aaaaatgact gaacaacact ttaccgaaca aaccaaagcc
     7381 ctgattgaca gcttaaaaac catttgcgcc aactatggct taggcaatga cggcaacgag
     7441 ttcaaaatca tcagtcaggc atttttgtat aaattcttaa acgataaata cgattttgaa
     7501 gttaaaaaaa ttcgcaaaga aaatcccgac gaggaaattg agttcatcaa tatggatatt
     7561 gagggaaaaa cagccgtttt gaagcccgag cattccataa aatatctgtc cgagcggcaa
     7621 aacggtgcag attttgccaa actctttgac gatacgctga ccgacatcgc cgcgcataat
     7681 gcggaattgt tttcagtgaa aaccgaaggc ggggcgaaaa tcgtgttgtt cgagcgtatc
     7741 agtcaatata ttactgatga aggtcgccgc gacgattttt gccgcgcgct gatttccaag
     7801 ctggcgggtt ttagctttga ggtgattttt gcgcaaaaat ttgatttttt cgccacgatt
     7861 tttgaatacc tgattaaaga ctacaacagc aattcaggcg gcaaatacgc cgaatactac
     7921 acgccgcacg cagtagcgcg gattatggcg gatattttgg tgccggagga agtgcgcggg
     7981 caaattcgca gcgtggacgt ttacgacccg tcggccggtt cgggaacgct gttgatgaac
     8041 gttgcccatg ccatcggtga agataaatgt atgatttata cgcaggatat ttcgcagaaa
     8101 tcgtccaatc ttttacggct gaatctgatt ttgaacaatt tggtgcattc actgaataat
     8161 gtggttcagg gcaatacgat tttgtcgccg tatcacaaag acgcttcagg ccgtctgaaa
     8221 aaatttgatt tcattgtttc taatccgccg tttaaattgg atttcagcga tttccgcgat
     8281 cagctggaaa gcgatgaaaa ccgcgaacgc ttttttgcag gcattccgaa aatcaaggcg
     8341 aaggataagg ataaaatgga aatttatcag ctttttatcc agcatatctt gtttagcctg
     8401 aaagaaaatg gtaaagcggc gattgtattg ccgaccggct ttatcactgc ccaatcgggc
     8461 atcgataaaa aaatccgcga atatttggta gaaaacaaaa tgcttgccgg cgtggtttcc
     8521 atgccttcca atatttttgc caccacggga accaacgttt ctattctgtt tatcgataaa
     8581 gccaataaag acaacgtagt attaatcgac gcatcgggct tgggtgaaaa aatcaaagac
     8641 ggcaaaaacc aaaaaaccgt actttcccgc gaagaagaac aaaaaatctg caataccttc
     8701 acgcacaaac aggcagtgga agatttcagc gtggtggtcg gctatgatga gatcaaagcc
     8761 aagaattaca gcttgtcggc aggtcaatat tttgaagtaa aaattgatta tgtggatatt
     8821 tccgccgagg aatttgagca gaaaatggcg ggattttcgg cagatttgga caagctcttt
     8881 gcggaatctg ccgaattgga aaaagagatt aaggatagat tagcaatgtt gaaattcaat
     8941 tcataaatac tgacaaatta aactggccaa acttaaaagg ccgtctgaaa attttcagac
     9001 ggccttttgt ttcatttgtt ttgagaatca atcaagcaag attatttttc agcttcttca
     9061 aagccgacga cttcgaggcc gaagccggtg aggccggtga aggaggaagg ctggccgagg
     9121 acgcgcagtt ttttgacgtt gaggccggcg aggatttgtg cgcctatgcc gtagcttttg
     9181 ctgtcccatt tgtaggcttg gtttgcgcct ttaggcaggg tgcggtcgag cagggatgcg
     9241 ccgtcttcgg tgcggtgcag aaggatgacg acgccgcttt ctgcctgttg gacgcgctcg
     9301 agtgctttgg gcaatgacca tgaatggcgc gggttggctt gaatgaagtc catcacactg
     9361 aagggttcgt ggacgcggac gagggtttcg gtgtcggcgg agggcgtgcc tttgacgagg
     9421 gcgaggtggg tttcgccgga gagtttgtcg acgtaaacgt gttgttggaa ctcgccccac
     9481 ggggtttgta caggcgcatt gcccatgtct tcaagcaggc tttcggtacg gctgcggtat
     9541 tcgatgaggt cggcaatcgt gccgattttg agcttgtgtt cttcggcgaa tttcatcagt
     9601 tcgggcatac gcgccatcgt gccgtcgtcg ttgatgattt cgcaaataac ggaggcagga
     9661 atcagcccgt tcatttgcgc caggtcgacg ccggcttcgg tgtgtccggc gcggacgagt
     9721 acgccgcctt tttgggcgcg aagcggaaag atatgaccgg gttggacgat gtcttcgggt
     9781 ttagcggtcg gggaaacggc ggtttgaata gtcagggcgc ggtcggcggc ggaaatgccg
     9841 gtggtaatgc cgtgtgcggc ttcgatggag acggtaaagt tggtgccgta ttgcgcgccg
     9901 tttttctgag tcatcatggg caggccgagt ttttcgacca tttcgccgtc catcggcagg
     9961 cagaccaagc cgcgcgcgtg tttaatcatg aagttgatgg cttcgggcgt gacgaattgc
    10021 gccgccatca gcaggtcgcc ttcgttttct cggtcttcgg catcggtgat gatgaccatt
    10081 ttgccggctt tgatgtcggc taggatttcg gggatggggg aaatatggga catggtgtgt
    10141 tttcctgtgt gttcgggcgg gcgggcggtg tgttcggtat cgagccagaa ggcgggcatt
    10201 tttgcagcct gttcgatttt acgggctttt ttctcgccga aggatttgtt tttcaaaagg
    10261 gcggagagtt cgcctgtgtt gagggcaacg gcttcggcaa aacgggtttg caaaccgccg
    10321 tagtgttctg ctatccattg ccgcaggttg cggcggcgca gaccggctgt gtcggtcatc
    10381 gtttcatcct ttgtagaaat cggatgtagc ggattgtaag cgcgtattta ccaaaaagca
    10441 aatctgtttt ttcgctaaac cgaattattt gctttttggt aaacagatgc cgtctgaagc
    10501 cggattcgtg gcttcagacg gcattgccgc aaccccgtcg gcggggcggc tgtttcttcc
    10561 cgcccgcttc cgattcggga tttgccggaa gcttattccg aaaaaaattt ttgataaacg
    10621 gccttgattg ccgggtacag cataggcggt acgagcaggc gcaatatcgg caatcctatg
    10681 atgaatgcgg tcttcccgat aaaaaccgga cggattgcct tcgcgccgaa tatctttctg
    10741 catttttctt taaatgaaaa atatttccgg tagatgacga taatgttttt ggaaaaataa
    10801 agccttacta atatcgacct cagatagccg atattgtcga agacaaattt ttgcaaaccg
    10861 ccgtagatgg gggaattttt gttttcgact aaaaaatcca caccccggtc gagatgcgtc
    10921 agcacatcgc tgaaattttt gtatttgatg ttgtggctga tagagccgcc gagaacgcgg
    10981 tactggtaaa aagggttatc gtaaaaggca aaagtcttga taaaacgcgc caattgcaaa
    11041 ttgtacggga aatcctcgtg aatgtatcct tttgggaaaa acagattgtt tttgatgatt
    11101 atttcccgcc tgacgatttt tgtccacgcg ttggcgatat agtaccgccc ctccaccagc
    11161 gtttcaaaat ggcggacaaa atcattatcc gaaaagtccg cccctttggg gatgacgtgg
    11221 taattgaggg acgagggatg caggatcaaa tcaacctttt tgtctgcaag ttgttgtaaa
    11281 tcaaagagaa tccccccccc cgcgtttttt gaacggttgg tatcggccca atagtcgtcg
    11341 ctgtccaaaa agattaggta atcgcctttt gccgcccgga taccggcgtt gcgggcatcc
    11401 gacagcccgc cgttttcttg atgaatcact tttatatgcg gatatttgcc tgcatattcg
    11461 tcgcaaatct tcccgcagcc gtccggcgaa ccgtcatcga ccaaaatcat ttcataatcg
    11521 gtaaaatttt cggcaagcac ggaatccacg cagcagcgga ggtatttttc cacattgtaa
    11581 atagggacga tgatggagaa aatcataaat atcaatccat tatattaaga tgtttgcgcg
    11641 tatgcctcaa acccgcgctc gcaatgcgtt tgcatccact ataaaactta ttgctttatc
    11701 aaggtatgga aacctgtttc ccgaaaggcg gcgcaggatg cccgttccct gcaactttgc
    11761 cttattccga catcagatgt cccagcttgt ctgctttggt ttggaggtag cgtttgtttt
    11821 caaggttttc cccgacgtgc agggggatgc gttcgaccac gttaatcccc gcatctttca
    11881 gggtttggat tttttcgggg ttgttggtca gcagtttgac cgagcggatg cccagatatt
    11941 cgtagataga ttgcgccaaa cggaaatcgc gggcatcgac gggcagcccg agtgccaaat
    12001 tggcttcaac cgtatccata ccttggtctt gcagatgata ggcgcggatt ttgttaatca
    12061 gcccgatgcc gcgtccttcc tgacgcagat agacgatgat gccgcgcccc tctgtctgta
    12121 ccgccctcat ggccgcttca agttgaggtc cgcagtcgca ttttctcgag aacagcgcat
    12181 cgcccgtcag gcattcggag tggatgcgcg tcagaaccgg attgccgtct gaaaaattac
    12241 cgacggtcag cgcgacgtgt tcctgcccgt ttgcctcttc aaagccgtgc atcgtaaata
    12301 cgccccattc ggtcggcagg cggcaggatg ccacatggtt caacatttca gacatcttca
    12361 ctcccatctt ttccggcaga catacccaac agcagtttca aaggttcgga caaagccaag
    12421 gcaagagcca cccattccac ctgtgctgcc gtacccgcac actctgcgca ttcaaattcc
    12481 acatgaacca cgcccaacac accgccactt tccgtgcaga ccggaatgga aatttgcgcc
    12541 gccgaagcat gattgcgttc tcccgaaagc tcccccaaat ccaaccaacg gcgtacatcc
    12601 gaggcaacat tcatccaacc gctttgcgcc gaacggcaag ccagcgaaac cttgcctgcc
    12661 gcttcatcca aatcccacag gttttccaaa acctcgccct gtcgggacag gcatatcagt
    12721 tggaaagcct ggttttcaga tggcatcaag gcatagaccg ccgcactccg cacgcctgtc
    12781 gagcgcgaaa acaccgaatc caaagccatg aaaagccgtt tcagtgcatc ttcgcggaca
    12841 ttgtcgcacg acaggtaatc ggcaagtttc caatcctcat cactgcgcca caaaaccgaa
    12901 cggtctatcg aagccgtccc catatccatt accgtctgcg ccgtcagata cgccgcccga
    12961 acctcgtcaa gcggcagctt caaaccctga gtcagcagaa aatccttaat caaagcagca
    13021 ggcataccca aattccgtca ataaaaacaa aaaaccgccg gattccgatg tcaggcggac
    13081 gaaaaacaga ttttaccgcc ccaaacccca agccatcaac agccccgccg aaaaccttgc
    13141 acaaaaaaac aaaatctgta taatcgtcca attcccatgc ggacgtggcg aaattggtag
    13201 acgcaccaga tttaggttct ggcgccgaaa ggtgtgagag ttcgagtctc tccgtccgca
    13261 ccaataatga taaataaatc atatagttaa tgcttatcgg gacaaattag tgccacaaaa
    13321 cataagtcgt ctgcttttca gcgggcggct tttttatctg cctatatgtt tcaacacgca
    13381 gaacggtaca taaagtgccg ccatttgttc taccccgaat cagaagcggg tgcttccgcc
    13441 cgcaatcaga ttcaccgccc ctaatgccgg ggtttcaact ggaaagaaga aaatattgat
    13501 tttgatgatg gcatcaaaaa accccttccg cccgtctgcc aaaaggaatg gttaagaaaa
    13561 gcaatgcgtc ttttgatgga acgcgatata taaggaattg aggggaaggg caggcgggtt
    13621 tctgcccgtt aatcctgcgg acgatcccgc caaacccgac acgcgcgggc atatggcgga
    13681 ttgtttacaa tattgtctaa aaatctgaac ttgcaaacgc gaaataaggt agaatacgcc
    13741 ccgttatttt accgtccaat ccccatttac caaggaaaaa tgatgagtat ttcattgagt
    13801 taccgcgatg caggtgtcga tatcgacgca ggcgaccaac tggtcgaaaa catcaaacct
    13861 tttgccaaac gcacgatgcg cccggaagta ttgggggatt tgggcggctt cggcgcattg
    13921 gtcgaaatcg gcaagaaata taaaaatccc gtattggtca gcggtacgga cggcgtgggt
    13981 accaagctca aacttgcctt tgattgggat aaacacgata cggtgggcat cgaccttgtt
    14041 gcaatgagtg tcaacgatat tttggttcaa ggagcagaac ctctgttttt cttggattat
    14101 ttcgcctgcg gcaaattgga tgttccgcgc gcaaccgatg tcatcaaagg cattgcacaa
    14161 ggttgcgaag aatccggctg cgccctgatt ggcggggaaa ctgccgaaat gccgggcatg
    14221 tatcccgtcg gagaatacga tttggcgggt tttgccgtcg gcgtagtgga aaaagagaat
    14281 gtcattaccg gccgcagcat cggcgcgggc gatgtggtat tgggtttggc ttccaacggc
    14341 gcacattcaa acggctattc ccttatccgt aaaatcatcg aacgcgacaa tcccgatttg
    14401 gatgccgagt ttgataatgg caaaaccttg cgtgaggctg ttattgcgcc gacccgtctg
    14461 tatgtgaaac cgattcttgc cgctttggaa aaatttacca ttaaaggtat ggcacacatt
    14521 accggcggcg gcattaccga aaacgtgccg cgcgtgttgc ctgaaaacac ggttgcacaa
    14581 atcgatgcta aatcgtggga attgcccaag ctcttccaat ggcttcaaaa ggcgggcaat
    14641 gtggaaaccc aagaaatgta ccgaaccttt aactgcggca tcggcatggt cgttattgtt
    14701 gctgccgaag atgccgatgc ggttcagggt ctcttgggtg aacaaggtga aacagtttac
    14761 cgtttaggtt tgatccgtga gcgtcaggga gacgagcatc aaacccaggt tgcctgattg
    14821 cttctatagc gaaatgccgt ctcaaacatg ggtttggacg gcatttttat agaggatggc
    14881 ggattcgcat ttgaagtgca actttcccta acagaaaaag gccagtatgc ggtagcatac
    14941 g
//
LOCUS       DAWEYF010000032        14917 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.032, whole genome shotgun sequence.
ACCESSION   DAWEYF010000032 DAWEYF010000000
VERSION     DAWEYF010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14917
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.032"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(104..1888)
                     /gene="lpdA"
                     /locus_tag="WGN93_000732"
     CDS             complement(104..1888)
                     /gene="lpdA"
                     /locus_tag="WGN93_000732"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ0226661.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1965..3572)
                     /gene="aceF"
                     /locus_tag="WGN93_000733"
     CDS             complement(1965..3572)
                     /gene="aceF"
                     /locus_tag="WGN93_000733"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ0226662.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAEAQPAPAAAPVA
                     AGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVV
                     KAVFLKVGDKVSEGTAIIEVETAGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPS
                     APAAAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQ
                     GGAAKPAAAGASLGSSLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPH
                     VTVHEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDN
                     LVLKNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQG
                     ACFTISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPIWNGKEFAPRLMCPLSLSFDH
                     RVIDGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3722..6385)
                     /gene="aceE"
                     /locus_tag="WGN93_000734"
     CDS             complement(3722..6385)
                     /gene="aceE"
                     /locus_tag="WGN93_000734"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ0226663.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAIETERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7079..8791
                     /locus_tag="WGN93_000735"
     CDS             7079..8791
                     /locus_tag="WGN93_000735"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ0226664.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGG
                     SLGPVGFKGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            8854..9510
                     /locus_tag="WGN93_000736"
     CDS             8854..9510
                     /locus_tag="WGN93_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ0226665.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGMGEGEDILGCVAGYGVGLDLTA
                     RDIQCHLKAQGLPWLKAKGFRHSACVSDFAAADRIGNPEKVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9520..9975)
                     /gene="ruvX"
                     /locus_tag="WGN93_000737"
     CDS             complement(9520..9975)
                     /gene="ruvX"
                     /locus_tag="WGN93_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ0226666.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9968..10516)
                     /locus_tag="WGN93_000738"
     CDS             complement(9968..10516)
                     /locus_tag="WGN93_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ0226667.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10518..11078)
                     /locus_tag="WGN93_000739"
     CDS             complement(10518..11078)
                     /locus_tag="WGN93_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ0226668.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11406..13211
                     /locus_tag="WGN93_000740"
     CDS             11406..13211
                     /locus_tag="WGN93_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ0226669.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13338..14822
                     /locus_tag="WGN93_000741"
     CDS             13338..14822
                     /locus_tag="WGN93_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ0226670.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKLIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQEKTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNGETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3536 a         3696 c         4208 g         3477 t
ORIGIN      
        1 tcggagaaga tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccta
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatca aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacggcc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggatgctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcagca gcaacgtggc
      541 cttcgtgaac ggctttgtgt gccaacattg gttgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggtaacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtaacgttgc ggctctttag gcgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgaggccgat aatgccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagtgg
     1141 ctgcctgttc gtacgcgtcg ccggcagtca gcgacacttc caagtggtgc gggtctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 ccgcttcggc tttaggagcg gcagccgtgc cttcagcttc aacgacaaca atcaaaccgc
     1681 cttcggagat tttgtcgccg actttgactt tcacttcttt gaccacgccc gcaacttcgg
     1741 caggcacgtc catcgtcgct ttgtcggttt ccaaggtaat cagggtgtcg tcaacggcga
     1801 tggtgtcgcc cacgtttact tcaaccgcga taatatctac attttcgtgt ccgccaatgt
     1861 cgggcacttt caattcaact aagctcatgt ctcatctttc tgaatgatgt tcaaacttcc
     1921 ttttcagacg gcacagaccg ctatgccgtc tgaagccgat cgggttacag ggtaatgcgg
     1981 cggaagtctt tcaacagctt cgccaagaat acggtaaagc gcataccggc cgcaccgtcg
     2041 atgacgcggt ggtcgaagga caggctcaac gggcacatca ggcgcggggc aaactctttg
     2101 ccgttccaaa tcggtttgat ttgggatttg cacacgccca agatggcgac ttcgggagcg
     2161 tttacaatcg gcgtgaagcc tgtgccgccg ataccgccca agctggaaat ggtaaagcac
     2221 gcgccttgca tttcttgcgg tttgagcttg ccttcgcggg cttttttgga caattcggtc
     2281 agctcttggc tgatttgttt caagcctttt tgatccacgt ctttgatgac gggaacaacc
     2341 aagccgttcg gcgtatcggc tgcgaaaccg atgttgaagt agtttttcag caccaggttg
     2401 tcgccgtcca gagaagcgtt gaattcgggg aaggctttca gcgcggaaac ggaggctttg
     2461 atgatgaacg ccaacggtga cagtttcacg ccttcgcgtt cccattcttt gttcagttgt
     2521 ttgcggaatt cttccagctc ggtcatatct gcttcttcgt gtacggtaac gtggggaatc
     2581 accacccagt tgcgagacag gttttgaccg gagattttct taatgcggga caattcttta
     2641 acttcgacat tgccgaattt ggagaagtcc actttaggcc acggcagcaa gtccagactg
     2701 ctgcccaaag atgcgccggc tgcggcaggt tttgccgcgc caccctgcat tacggatttc
     2761 acaaaggctt tgatgtcgtc gcccacgata cggcctttca agccggtacc tttgacttgg
     2821 cccaaatcca cgcccaattc gcgcgccagt ttgcgtgcgg aagggccggc gtgtgctttg
     2881 gcgaaagcgg cctcgtcgat tttggcagcg gcaggtgcag aaggtgcagg cgcggcggcg
     2941 ggtgcggcgg cagcagtcgg aggcggagcg gcagccggtg cggcagcttg agcggcttga
     3001 gcaggggctg ctgcggcaga gccggcggtt tctacttcga taatggcagt accttcggac
     3061 actttgtcgc cgacttttaa gaatacggct ttaacgacac cggcagcggt acaaggtacg
     3121 tccatcgttg ctttgtcggt ttccaaagta atcagcgtgt cgtcttcggc aacggtatcg
     3181 ccgactttga tctcgacggc gattacatcc acatcggtat ggccgccgat gtcgggaacg
     3241 gctacttgaa cggttgcacc gcctgcggca acgggtgcgg cagcaggtgc aggttgtgct
     3301 tcggcagcag caggagcggc ttcggcagcg gcggcaccgg tttcaacggt caaaattacg
     3361 ccgccttcgg agattttgtc gccgactttg actttaactt ctttcacgac accggccgca
     3421 tcggcaggca catccatcgt ggctttgtcg gtttccaaag taatcagggt gtcgtcaacg
     3481 gcgatggtgt cgcccgcttt aacttctacg gcgatgatgt cgacgttttc gtgaccgccg
     3541 atatcgggga ctttgatttc tacgatactc atttgagttc ctttaatctt tttcagttgg
     3601 atgccgtctg aaaactgctt cacgcggcat cggtacggtt tgtctgttca aaccattcgg
     3661 gcattcggtt ttcagacggc atgatgtctg aatggggcaa acaggccgtc tgaaacatca
     3721 atcagcgttt ccagctaggg gctgaatcgg ctttgatgcc gtatttttca atggcttgtt
     3781 gaacagtttc tttgctgact ttgccttgtt ccgccaatgc ggccaatgct gctacggcaa
     3841 cgttgtagcg atccacttca aagaagcggc gcaggttggc gcgactgtcg gaacggccga
     3901 aaccgtcagt gcccaagacg tggtagtcgt tagggatgta ggcacggatg cggtcagcat
     3961 agctgcggat atagtcggta gcggcgataa ccggaccgtc atgaccttgc agttgagagg
     4021 taacgaaagg cactttttca gcttccagcg gatgcaggcg gttgaagcgt tcggtttcga
     4081 tggcgtcgcg gtgcagcagg ttgaaggacg ggcaagacca gatgtctgct tccacgccga
     4141 agtcggcttt cagcagctcg gcaccggcaa tcacttcttg cagaatcgta ccggaaccca
     4201 tcagttggac tttcttgtcg cctttgccgc cggctttcag caggtacata cctttcaaga
     4261 tgtcttgttc cgcaccttcg ggcatatccg gatgggtgta gttctcgttc atcagggtga
     4321 tgtagtagaa cacgtcttca ttattggcat acatacggcg cagaccgtct tgtacgatga
     4381 cggcgacttc gtattggaaa gtcgggtcat aagatacgca gttcggaatc aggtcggcct
     4441 ggatgtggct gtggccgtct tcgtgttgca ggccttcgcc gttcagcgtc gtacggccgg
     4501 cagtaccgcc cagcaggaag ccgcgcgcgt gcatatcgcc cgccgcccaa gccaagtcgc
     4561 cgatacgttg gaaaccgaac atagaatagt aaatgtagaa cggaatcatg gcgaagttgc
     4621 tgttggcgta gctggttgca gccgcaatcc agtcggccat cgcgcccggt tcgttaatac
     4681 cttcttgcaa gatttgaccg tcaacggatt ctttatagaa catcagttgg tctttgtctt
     4741 gaggggtata ttgctgacct ttcggattcc aaataccgta ttggcggaac ataccttcca
     4801 tgccgaaagt acggctttcg tcgggaacga taggtacgac gcgtttgccg atttttttgt
     4861 ctttcagcaa agtggacagg atgcggacga atgccatcgt ggtcgagaac tcgcgttcac
     4921 cgctggattt gagttgtgcg tcgaatgctg acagctcggg cacttccaat acttcctgcg
     4981 tcggtttgcg ttgcggcagg tagccgccca aagcatcgcg gcgtgcgtgc aggtatttgt
     5041 attcttccgt atcgggggca aaagtcaggt aaggcagatc gccgctttcg atttgttcgt
     5101 cggtaaccgg aatgtcaaag cggtcgcgga attgtttcag ggacgctttg tccatttttt
     5161 tggcttggtg ggcaacgttc tgaccttcgc cggatgcgcc cataccgtaa cctttaatgg
     5221 ttttcgccaa gatgacggta ggtttgccgt cggcatggtt cgctgcgcgg tcgtaggcgt
     5281 tgtacacttt ttgcgggtcg tggccgccgc ggttcaatgc ccagagttgc tcatcggtca
     5341 tatcggcaac caatgctttc agttcgggcg tattgaagaa gtgttcgcgc acatacgcgc
     5401 cgtctttgga tttgtaagtt tggtagtcgc cgtccaaaca ttcttccata cgttggcgca
     5461 ggataccgtc tttgtctttc gccaagaggc ggtcccagcg gcggccccaa atgactttga
     5521 cgacattcca gccggcgccg gcaaagttgc cttccaattc ttggatgatt ttgccgttgc
     5581 cgcgtaccgg accgtccaag cgttgcagat tgcagttgat gacgaaaatc aggttgtcca
     5641 agccttcgcg tgcagccagt gcgattgcac cttgagattc gggttcgtcc atttcgccgt
     5701 cgccgcagaa acaccatact ttacggcctt tggtttttgc caaaccacgc gattccaagt
     5761 atttcaggaa acgcgcctga taaatcgcca tgatgggccc caagcccatg gatacggtcg
     5821 ggaactgcca aaagtcgggc aagaggtggg ggtgcggata ggaaggcaga ccgtgtccgt
     5881 ccacttcttg gcggaagttg ttcagctggt cttcggtcag acggccctcg acgaatgcgc
     5941 gtgcatagat gcccggggcg acgtgacctt ggaagaagac caaatcgcct tcttcgcctt
     6001 cgcctttggc tttccaaaag tggttgaaac cgacttcgta catggtggcg gcagattgga
     6061 aagatgcgat gtgcccaccc agttccaaat ctttcttgcc ggcgcgcaat acgatggcgg
     6121 cggcgttcca gcgcacgaat gcgcggatgc ggtgttcgat gttttggtcg cccggaatgc
     6181 ctttttcgtt ttcaaccgaa acggtattca aatacggggt ggtcgtgccg tgtggcatac
     6241 gtacgccctt gtcgcggcag tatttgacca ggttttccaa gaggtattgc gcgcgttcgc
     6301 cgccttcata ttcgaggacg gagcttaaag cgtccagcca ctcttgggtt tcgatagggt
     6361 caacatcgtg taattgggtg gacatagtat ctatccttta tgttgagtgt ttaatcggca
     6421 gggagggtgt agccaacccc tttattttcg tttgtgaaaa ataataagca aaaacgaaaa
     6481 tttctaaatc aaaccgaaaa aaataattta agtttaatgt tttcaaaaaa ttataaaagt
     6541 tttggaaaca agggaaaact tgaaaaaaat gttcgatctg ctccacacga aatcctatca
     6601 gcaatcgggt ctgctggcaa ataaccatgc ctgtaaaagc aggttttata ctgaagttgg
     6661 cgtttggtaa ggtcaagtct ttttgatttc gaaatattct gtttgatttt ggcgatattt
     6721 tttcggaatt gtggtatatc gaatcattat gtctctgtcg gcaattttcc tattgtagaa
     6781 aatctataca caagctttgt ggataaccgt gttgataagc cacggcttgt gttaaaaaag
     6841 tcttacgcaa caaatgtacg cttattttga ttaaaaaata ggcacattta aatctataaa
     6901 aatcatgtgc ttatgttcaa tatgatgttt ctggtcatgt ttttgccgtc tgttatggga
     6961 tttgtcccgc gcttggggca gggggtgaat tttggaggtt ggtgcaaaac ctgctttttt
     7021 cgcgttacaa tctgcacccg atttactttt gaatttgcct gtttggaaaa atacttttat
     7081 gaaagccagc caattcttta tctctacttt aaaagaagcc cctgccgaag ccgcgcttgc
     7141 cagccacaag ctgatgattc gcgccggcct gattaaagcc aacgcgtccg gcctttatac
     7201 ttggatgccg atggggctgc gcgtgttacg caaagtcgaa aacgtcgtgc gcgaggaaat
     7261 ggcgcgcgcg ggcagcgtgg agctgctgat gccggtggtg cagcctgccg agctgtggca
     7321 ggaatccggc cgctgggaat tttacggtaa agaactgctg cgcctgaaag accgccacga
     7381 ccgcgatttc tgcatgggcc cgacctgcga ggaagtcatc gccgacatcg tgcgcaaaga
     7441 aatcaacagc tacaaacagc tgccgaaaaa cttttaccac atccaaacca aattccgcga
     7501 cgaagtgcgc ccgcgtttcg gcgtgatgcg cgcgcgcgag ttcgtcatga aagacgctta
     7561 ttccttccat gccgactacg cctcgcttca gacgacctat gatgccatgt atgacgctta
     7621 ctgccgtatc ttcacccgtc tgggcttggc attccgcccc gtcgccgcag acaccggcag
     7681 catcggcggt acgggttcgc acgagtttca agtgttggcg gaaagcggcg aagatgttat
     7741 tgcgtacagc gacacttccg attacgccgc caatatcgag ttggcaccga ccttgccgct
     7801 taaaggcgaa cgcgccgctg ctcaggctgt gttgaccaaa gtacatacac caaacgtcaa
     7861 aaccattgag tctttggttg aattcctgaa tattccggtt gaacaaaccc tcaaatccat
     7921 cgtggtcgaa ggcgaaaacg aaggcgaaat cgtcttatta ctgttgcgcg gcgaccatga
     7981 gttcaacgac atcaaggcag aaaaactggc gggcgtgaaa tcgccattga cgatggcaag
     8041 ccctgccgcg attgtcgaac agttcggcgc aaacggcggc tctcttggtc ctgtcggctt
     8101 caaaggcaaa gtctatgccg atttcgctac cgaaaaaggc gcggactggg tcatcggtgc
     8161 gaacgaagac ggctaccact ataccggctt caacttcggt cgcgatgccg ccgagcctga
     8221 gtttgtcgat ttgcgcaacg tcgtcgaagg cgacgaaagc cccgacggac aaggccgtct
     8281 gaaactggcg cgcggcattg aagtcggaca cgtcttccag ttgcgcgaca aatatactaa
     8341 agccatgaac gtcagcttcc tcgacaacaa cggcaaatcg caaattatgg aaatgggctg
     8401 ctacggcatc ggcatcaccc gcgtcgttgc cgccgccatc gagcagaata acgacgaaaa
     8461 aggcatcatc tggaccaaag caatggcgcc gtttgaagtc gttatcgtgc cgatgaacta
     8521 caaaaaatca gacaccgtac gcgaagccgc cgacaaaatc tatgccgaat tgctggcggc
     8581 aggcgcggat gtgctgctgg atgaccgcga cgaacgcgca ggcgtattgc tgaacgattc
     8641 cgagctgttg ggtattccgc accgcatcgt catcggcgac cgcgctttga aagaaggcaa
     8701 tgtcgaatac gccgaacgcc gcaacaacga agcgcaggca gttgcaatcg gagaaattgt
     8761 tgcgcgtgta acagcttcat taaatgggta agcttggtca aatgccgtct gaaaataatt
     8821 tcagacggca tttttatttg gggagaaagt gaagtggctt cagtattttt agaaggagaa
     8881 gcagtcgagg tcggcaatat tttctgtatc ggcaggaact atgccgcaca tattgaagag
     8941 ttaaaaaacg aaataccttc cgaacctgtg gtgtttatga agccgtcagg cagcattttg
     9001 aatagcggcg gtacaatctt gctgcccgag tttagtaggg atgtgcagtt tgagtgcgaa
     9061 ctcgtgctgc tggtcggtaa ggattcagac ggcatgggag agggtgaaga tattttggga
     9121 tgtgtggcgg ggtacggcgt gggtttggat ttgaccgcgc gagacatcca atgccatctg
     9181 aaggcgcagg ggctgccctg gctgaaggca aaagggttca ggcattccgc gtgcgtgtcg
     9241 gattttgcgg cggcagacag aatcggcaat cccgagaagg tgttgttttc attaaaacaa
     9301 aacggcgtat tgaaacagcg cggggatacc ggtttgatga tttacccgat tcgggaaatt
     9361 ttacacaaac tggcggcgga ttacggtttg gggaaagggg atttggtgtt taccggaacg
     9421 ccctccggcg tgggcgcaat cggtgcgggg gacaatttgg cattggagct ggacggcttg
     9481 gtgcgcgcct ctttcacggt agggtgttaa ccgcgccgct taaccctcac gcccgttgaa
     9541 acattccgcc ggaccgccct cgaaaaaacc gtgcaagatg gcttgcgccg ccacttggtc
     9601 gagcaccgat ttgcgttttt tgccgaagac ctgtgcttcc gaaagcaggc tttcggcata
     9661 gacggacgac agccgttcgt caacccaata gacggggaga ttgaacctgc cgttcagcct
     9721 gcgtccgaac ttgcgcgaca ggtgcgtcat ttcatgtttc gtgccgtcgg tatgcacggg
     9781 cagtccgacg acaaaataac gcggctgcca ttcttgaacc agcttggcga ttgccgcgaa
     9841 cttttcatcg ttgctgccgc cggtaacggt gctcaaagga tgggatagcc ctaattccgc
     9901 gtctccttgt gccacgccga tacgcgcttc gccgaagtcg aatgccagtg ccgttccttt
     9961 tggaatttta tgcatggccg gctcccgaaa acagggcgag cgggtcgatg ccgagtttgg
    10021 cgaatgcggc ggcgtaacgg tgttcgtagg ggatgtcgaa caggatgtgt tcgtcggcgg
    10081 gaacagtcag ccacgcattg tcggcaagtt cgcgttcgag ctggcctttt ccccagcttg
    10141 aatagcctat gctgatcaag gctttgtcaa ccgcaccttc gcgtgaaata ttttcaatca
    10201 cgtctcggga agaagttagc gcgatattgt ctgaaacgcc gatactgctt tgccagttgc
    10261 cgatcggggt atgcacgaca taacctcgct cgacttgcac cggtccgccc atcatcacgc
    10321 tgtcgtgctg catccgcatg gggatgtttt tgccggtggc ggaaaaaatc atgtccatcg
    10381 taatcggaga gggtttgttg atggcgatgc cgagtgcgcc gtcttcatcg tgtttgcaga
    10441 tatagacgac cgattgtgaa aaaaacgcgt cttccatatc gggcatggcg acgagaaagt
    10501 ggttggagag gttcatatca gcgtttgtcg ggattttcta tcgggttgga aatcatgcag
    10561 gcgccggcaa gcaggttgcc ggaagtatcg gcttgcaccc catcggtttg cggtatgccg
    10621 ccgccgaaac aggaaaccgc gcttaaggaa tttttcggcg agccttggat gattttatcg
    10681 ctgtacacca aataggcgaa ggttttgcgt ttggggtcgt aataacggac aatctgccgg
    10741 ctcttgaacg cgaagctcgc accgtgtttg aaaacttctt tcggtttgcg cacggcggtt
    10801 tcgtcaaaag aaatcgaaga tgccgtctga acgcacgaaa ccgatgcgtc ggacgcgtcc
    10861 tcttccaaat tgaccatttc cttcaagccg cctttttttg catacgaaat ataacaggca
    10921 accccttgaa cgtcgggatc gtcgaatcct tccacttcga tacggtcgtt tttgcccagt
    10981 atgttgaaaa cggtacttgc ccgtccgatt ttatcggttt cgccgctgcc gcaggcagtc
    11041 agcaggacgg cggcagacag cagtagcagt ctgttcatca aaatttcctt atcggttgaa
    11101 tccccgtttt ccgtgaaggc ggcagggctt gctttgtttg gaggggcgca cgttcccaaa
    11161 atcgggcaac atacggtatg cggcttaatg tgctaccctg tgtgtcggaa cacaatatcc
    11221 gttgcggcat tgaaaatatg acgcacaata taaggctgtt tgagccgatt gcaagtatcc
    11281 gcgcaaagaa ggcgcaagat tgggcaaacg gcattttcag acggcataac tgacagtata
    11341 atccaaacgt ccggctgctt tcgtgcagcc ttcagtatta tccaactttt tccgaaggtc
    11401 gaaccatgcg ctacaaaccc cttctgcttg ccctgatgct cgttttttcc acgcccgccg
    11461 ttgccgccca cgacgcggca cacaaccgtt ccgccgaagt gaaaaaacag acgaagaaca
    11521 aaaaagaaca gcccgaagcg gcggaaggca aaaaagaaaa aggcaaaaat ggcgcagtga
    11581 aagataaaaa aacaggcggc aaagaggcgg caaaagaggg caaagagtcc aaaaaaaccg
    11641 ccaaaaaccg caaagaagca gagaaggagg cgacatccag gcagtctgcg cgcaaaggac
    11701 gcgaagggga taagaaatcg aaggcggaac acaaaaaggc acatggcaag cccgtgtccg
    11761 gatccaaaga aaaaaacgca aaaacacagc ctgaaaacaa acaaggcaaa aaagaggcaa
    11821 aaggacaggg caatccgcgc aagggcggca aggcggaaaa agacactgtt tctgcaaata
    11881 aaaaagtccg ttccgacaag aacggcaaag cagtgaaaca ggacaaaaaa tacagggaag
    11941 agaaaaatgc caaaaccgat tccgacgaat tgaaagccgc cgttgccgct gccaccaatg
    12001 atgtcgaaaa caaaaaagcc ctgctcaaac aaagcgaagg aatgctgctt catgtcagca
    12061 attccctcaa acagcttcag gaagagcgta tccgccaaga acgtatccgc caagagcgta
    12121 tccgtcaggc gcgcggcaac cttgcttccg tcaaccgcaa acagcgcgag gcttgggaca
    12181 agttccaaaa actcaatacc gagctgaacc gtttgaaaac ggaagtcgcc gctacgaaag
    12241 cgcagatttc ccgtttcgta tcggggaact ataaaaacag ccagccgaat gcggttgccc
    12301 tgttcctgaa aaacgccgaa ccgggtcaga aaaaccgctt tttgcgttat acgcgttatg
    12361 taaacgcctc caatcgggaa gttgtcaagg atttggaaaa acagcagaag gctttggcgg
    12421 tacaagagca gaaaatcaac aatgagcttg cccgtttgaa gaaaattcag gcaaacgtgc
    12481 aatccctgct gaaaaaacag ggtgtaaccg atgcggcgga acagacggaa agccgcagac
    12541 agaatgccaa aatcgccaaa gatgcccgaa aactgctgga acagaaaggg aacgagcagc
    12601 agctgaacaa gctcttgagc aatttggaga agaaaaaggc cgaacaccgc attcaggatg
    12661 cggaagcaaa aagaaaattg gctgaagcca gactggcggc agccgaaaaa gccagaaaag
    12721 aagcggcgca gcagaaggct gaagcacgac gtgcggaaat gtccaacctg accgccgaag
    12781 acaggaacat ccaagcgcct tcggttatgg gtatcggcag tgccgacggt ttcagccgca
    12841 tgcaaggacg tttgaaaaaa ccggttgacg gtgtgccgac cggacttttc gggcagaacc
    12901 ggagcggcgg cgatgtttgg aaaggcgtgt tctattccac tgcaccggca acggttgaaa
    12961 gcattgcgcc gggaacggta agctatgcgg acgagttgga cggctacggc aaagtggtcg
    13021 tggtcgatca cggcgagaac tacatcagca tctatgccgg tttgagcgaa atttccgtcg
    13081 gcaagggtta tatggtcgcg gcaggaagca aaatcggctc gagcgggtcg ctgccggacg
    13141 gggaagaggg gctttacctg caaatacgtt atcaaggtca ggtattgaac ccttcgagct
    13201 ggatacgttg atcggattgc cgaaacggta ggctttatgc aaatcgtgcc gatatggtgc
    13261 gctgttccgt gaagtttgcc gtttgccgta cctgtatttt ccggtttttg gaaatcaaga
    13321 gagaaagtta aagaagaatg tcgaaacctg tttttaagaa aatcgcactt tatactttgg
    13381 gtgcaatcag cggcgtggcc gtcagtctgg cggtgcaggg ttttgccgcc gagaaggaca
    13441 ggcgggataa cgaagtcctg ccggtgcaat ccatccgcac aatggcggag gtttacggtc
    13501 aaatcaaggc aaactactat caggacaaac ccgatgccga tttgtttgaa ggtgcgatga
    13561 agggtatggt ggccggtttg gatccgcatt ccgaatatat ggataaaaaa ggttatgccg
    13621 agataaagga gtccaccagc ggcgaatttg gcggcttggg gatggaaatc gggcaggaag
    13681 acggatttgt caaagtggtt tcgccgattg aggacacgcc tgcggaacgg gcgggggtga
    13741 aaagcggcga tttcattgtg aaaatcgata atgtttcgac acgcggcatg acggtcagcg
    13801 aagcggtgaa gaaaatgcgg ggcaagccgg gtacgaagat tactttgacg ctgtcgcgca
    13861 aaaatgccga caagctgata gtcgtcaacc tgacccgtgc cattattaaa gtgaaaagcg
    13921 tccgccatca cctgatcgaa cccgattacg gctatatccg cgtgtcgcag ttccaagaga
    13981 agacggtcga aagcgtcaat accgccgcaa aagagctggt aaaggaaaat aaaggaaaac
    14041 cgctcaaggg gctggtgttg gatttgcgcg acgaccccgg cgggcttttg actggcgcgg
    14101 tcggcgtgtc ggcggcattt ctgccgtctg aagcagtcgt cgtcagcacc aagggacgcg
    14161 acggcaaaga ccgcatggta ctgaaagcca ttcctgaaga ttatgtgtac gggatgggcg
    14221 gcgattcgtt ggcgggcatt cctgccgagt tgaaaaccat accgatgacg gtattggtca
    14281 attccggttc ggcttccgcg tcggagattg tcgcaggtgc attgcaggat cataaacgcg
    14341 cggtcatcgt cggtacgcag agcttcggca aaggttcggt tcagactttg attcctttgt
    14401 ccaacggcag cgcggtcaag ctgacaacgg cactgtatta tacgccgaac gaccgttcta
    14461 ttcaggcgca ggggattgtt cccgatgtcg aagtaaaaga taaggaacgc atttttgaaa
    14521 gccgcgaggc ggatttggtc ggacacatcg gcaatccctt gggcggcgag gatgtgaacg
    14581 gtgaaaccct tgccgtgccg cttgaaaaag atgcggataa gcccgctgta aaagaaaaag
    14641 gtaaaaagaa aaaggacgag gatttgtctt caaggcggat tcccaaccct gccaaagacg
    14701 accagttgcg gaaagctttg gatttagtca agtcgcccga gcagtggcag aagtctttgg
    14761 ggctggcggc gaaaaagccg gtttcaaata aagataagaa agataaaaaa gataagaagt
    14821 aggttttgac gatgccgtct gaaaggattt cagacggcat attatgtttg aaaggacagg
    14881 ttatgagcga ttttttaccg gaatttgaac cgtgcgg
//
LOCUS       DAWEYF010000033        14911 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.033, whole genome shotgun sequence.
ACCESSION   DAWEYF010000033 DAWEYF010000000
VERSION     DAWEYF010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.033"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(92..880)
                     /locus_tag="WGN93_000742"
     CDS             complement(92..880)
                     /locus_tag="WGN93_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ0226671.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSA
                     LFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
     gene            complement(882..1757)
                     /gene="bioH"
                     /locus_tag="WGN93_000743"
     CDS             complement(882..1757)
                     /gene="bioH"
                     /locus_tag="WGN93_000743"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ0226672.1"
                     /translation="MRYAAKSSRQPAQMPSETPDEPWHNTQRLIVGASAMRRQQERKS
                     MPDAVKKVYLIHGWGANRHVFDDLMPRLPATWAVSAVDLPGHGDAPFVQPFDIEAAAD
                     AVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTAAEDYPEGLAAP
                     ALGKMVGAFRTDYAKHIKQFLQLQLLHTPDAAEIIGRILPDLARCGTPSALQEALDAA
                     ERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLVVMEKAAHAPFLSH
                     AEAFAALYRDFVEGV"
     gene            1852..2349
                     /locus_tag="WGN93_000744"
     CDS             1852..2349
                     /locus_tag="WGN93_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ0226673.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWRTLPLHTVFRRHRPPQSTLKG
                     GERRRNIKNAFEIRTPPPKNCNILLIDDVFTTGATLDELAKTLKKSGANRICCWTLAR
                     TPMKK"
     gene            2414..2878
                     /gene="trmL"
                     /locus_tag="WGN93_000745"
     CDS             2414..2878
                     /gene="trmL"
                     /locus_tag="WGN93_000745"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ0226674.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVYENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            2889..3011
                     /locus_tag="WGN93_000746"
     CDS             2889..3011
                     /locus_tag="WGN93_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ0226675.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            3008..3727
                     /locus_tag="WGN93_000747"
     CDS             3008..3727
                     /locus_tag="WGN93_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ0226676.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANCSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGKSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASTSSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMIQTVLTAG"
     gene            3781..4107
                     /locus_tag="WGN93_000748"
     CDS             3781..4107
                     /locus_tag="WGN93_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ0226677.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            4189..4773
                     /gene="ruvA"
                     /locus_tag="WGN93_000749"
     CDS             4189..4773
                     /gene="ruvA"
                     /locus_tag="WGN93_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ0226678.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVSGIGAKTALGILSAMTADELAQAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHAVTDGLFAAAPAADETEDIVGTLLA
                     LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            4773..4910
                     /locus_tag="WGN93_000750"
     CDS             4773..4910
                     /locus_tag="WGN93_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226679.1"
                     /translation="MPSEGGATFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            4936..6792
                     /locus_tag="WGN93_000751"
     CDS             4936..6792
                     /locus_tag="WGN93_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226680.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAY
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLYSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPQALPLNVPQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGITQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            6797..7720
                     /gene="rsgA"
                     /locus_tag="WGN93_000752"
     CDS             6797..7720
                     /gene="rsgA"
                     /locus_tag="WGN93_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ0226681.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSMRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            7982..8206
                     /locus_tag="WGN93_000753"
     CDS             7982..8206
                     /locus_tag="WGN93_000753"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ0226682.1"
                     /translation="MKKNAPKSFEEALSRLESLTQAMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGPKELNLESDE"
     gene            8190..9086
                     /locus_tag="WGN93_000754"
     CDS             8190..9086
                     /locus_tag="WGN93_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ0226683.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(9195..9494)
                     /locus_tag="WGN93_000755"
     CDS             complement(9195..9494)
                     /locus_tag="WGN93_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ0226684.1"
                     /translation="MTASMYILLLLALIFANAPFLTTRLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(9606..11051)
                     /gene="nuoN"
                     /locus_tag="WGN93_000756"
     CDS             complement(9606..11051)
                     /gene="nuoN"
                     /locus_tag="WGN93_000756"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ0226685.1"
                     /translation="MNWSDLNLMPALPEVALLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAAVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALMFTLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRAHPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            complement(11061..12557)
                     /locus_tag="WGN93_000757"
     CDS             complement(11061..12557)
                     /locus_tag="WGN93_000757"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ0226686.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGSDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFTILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAQVAQSKM"
     gene            complement(12646..14670)
                     /gene="nuoL"
                     /locus_tag="WGN93_000758"
     CDS             complement(12646..14670)
                     /gene="nuoL"
                     /locus_tag="WGN93_000758"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ0226687.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQTATIQ
                     LFPSVEWSLITVTCLLLFIGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLFVTLPLILLAIPSVIIGYVAI
                     GPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            complement(14671..>14911)
                     /locus_tag="WGN93_000759"
     CDS             complement(14671..>14911)
                     /locus_tag="WGN93_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEZ0226688.1"
                     /translation="NILFIGIVFLFIQIAAYFDLKLILENQKTLYLIPLLPPAANIIV
                     LETAYLKTGRSASMIAYGTIFSLIAISIYILLVQI"
BASE COUNT         3794 a         4439 c         3854 g         2824 t
ORIGIN      
        1 cactatacat cggcatttcc tttagttctg tcggttttca caaacaaatg ccgtctgaaa
       61 cttggaaacg gcttcagacg gcatctgcac atcatctctt cggaaaaaac tgcaccacgt
      121 tctccccttg cggcagcatc agttttttaa cggcgtgtcc gtacactgtt tccagcgtaa
      181 tactcaaacc gccttcccgt tcaaatattg tcccgacaca cgaacgcgcg gcgttttcat
      241 cgttccacga catcgcccgc caaacgccca gcgtgtccat atccgcccaa aacgtttccg
      301 cctttttgta atccaacacc agcttcgccg tatcggtaac ggggtcgtaa aacccgtttt
      361 cagcaagcat atcgcccaag tcgtgcatat cggggaaaag cgcgctgcgg ctttcaatgc
      421 cgttttcttt cagacggcat ttcagttcgg taaaagtgtc gcgcccgaag caggtaaaaa
      481 acagcagccc gtccgtcttc aaggcgcgcg cccagttgtg cagcacagga aggatttgtt
      541 ccgccgccaa cagtccgaga ttcgaccaca acatatcggc acacgcttcg ggcagcggcg
      601 cggtcgggga ttggcagtgt tgcaccacgc ccttacccgt aaacctttgc caaaaaccgc
      661 ccttgcgcac ggctgcggca gccgccaaaa aatccgcacg ggaatcgtat tcttcaaata
      721 ccgcctgcgg atatcgtttc gccagcaggc tgcggctgat gtccgcatcc gccccggcaa
      781 gcaggatatg tttgggcgcg ttgcggacga gtgtcagccg ttggtcggca tgttcggcaa
      841 gatggcggtg aacctgccaa catttgtcct gcggattcat gtcaaacccc ttcgacaaag
      901 tcgcggtaca gcgcggcaaa cgcttccgca tggctcaaaa acggcgcgtg tgccgccttt
      961 tccatcacaa ccagcctgct gcctttcaaa tgccgatgca gatactcacc catacgcggc
     1021 ggtgtaatcg cgtctttgcc gccgaacacc agcagtaccg gaacatctat cttgtccaac
     1081 aaatgccgcg catccgccct ttccgccgcg tccaacgcct cctgcagggc ggagggcgtg
     1141 ccgcagcgcg ccaaatcggg cagaatcctg ccgatgattt cggcggcatc aggcgtgtgc
     1201 agaagctgca attgtagaaa ctgtttgata tgtttggcat aatccgttcg gaacgcgccg
     1261 accattttgc ccagtgcagg cgcggcaagc ccttcgggat aatcttcggc agccgtcagc
     1321 cgtgcgaaac tcgccgtcag gcagagcgaa cggactttgt cgggatggcg cgccgccaga
     1381 tacagcgcga ccaatccgcc gagcgaccag ccgagaatgt cggcgggcgt atcgatttgc
     1441 gcggcaacag cgtcggcggc tgcctcaata tcgaagggtt gcacgaaggg cgcgtcgccg
     1501 tgtccgggca aatcgacggc ggacaccgcc cacgttgcag gcaggcgcgg catcaaatcg
     1561 tcaaacacgt ggcggttcgc cccccaaccg tgtatcaggt aaactttttt gacggcatca
     1621 ggcatggatt ttctctcttg ttggcggcgc atcgcagacg cgcccactat caggcgttgc
     1681 gtattatgcc acggttcgtc cggcgtttca gacggcatct gcgccggctg ccgcgacgat
     1741 ttggcggcat accgcaccga cgcggcaaac agctgccccc tgtgtttcat gcacgttcaa
     1801 ggcggcgcgg tgtgcggcgg ctgtcagaaa aaaccgcccg cattcgaccg gatgtgggct
     1861 tcgctgcatt acgaaccgcc cgtcagcaat atgatacacg cgctgaagca cttggctgat
     1921 ttgagcatgg tgcagccgct ggcagacctg atgatgcaga atccgcccga ccggcttgca
     1981 gacgaatgtt tcgatttcgt cctgcccgta ccgctaagca gggagcggct gctgcaacgc
     2041 gggttcaacc aaagtgaaag catcgtcggg ctgctggctc aacgctacgg ttggcgcacg
     2101 ctgcccctgc ataccgtatt ccgccgccac cggccgccgc aaagcacgct caaaggcggc
     2161 gaacggcggc gaaatatcaa aaacgccttt gaaatccgca caccgccgcc gaaaaactgt
     2221 aatattttgt taatcgacga tgtctttacc accggcgcga cgctggacga attggcaaag
     2281 acgctgaaaa aatcgggcgc aaaccgaatc tgctgctgga cgctggcacg cacgccaatg
     2341 aaaaaataac taaatttttt gacaccccat ccgccttgtg gcaaggttac gcgcctataa
     2401 gtgattgata tttatgttta ccatcgtttt ataccaaccg gaaatccccc cgaacacggg
     2461 caacatcatc cgcctgtgcg ccaataccgg cgcggatttg caccttgtca aaccgctcgg
     2521 cttcccattg gattccgcca aaatgaaacg cgccgggctc gactaccacg aattcgccag
     2581 cctgacggtg tacgaaaact tcgacgactg cctcaaggca ctcgcaggca ggcgcatttt
     2641 cgccctgacc accaaaggca cggcgcgccc cgatgaaacc gcgtttcaaa aaggcgacgt
     2701 tttactgttc gggccggaaa cgcgcggact gcctgccgac atcctcgaca gcctgcccgc
     2761 cgcgcaaaaa atccgcctgc cgatgcagcc cggcagccgg agtatgaacc tttccaatac
     2821 cgttgccgtg attctctttg aagcgtggcg gcaacacggt tacgcaggcg gcgtttgaac
     2881 gcaagttcat gccgtctgaa aacctatccg gacacattcc gaaccgccgt ccgcactgta
     2941 cggcggttcg gaacgtatcc ggcgggcatg atgcccattc gtcttcaact caagaacgga
     3001 acacgttttg actttaaccc gaaaaaccct tttccttctc accgccgcat tcggcacaca
     3061 ctcccttcag acggcatccg ccgacgcagt ggtcaaggca gaaaaactgc acgcctccgc
     3121 caactgcagc tacaaagtcg ccggaaaacg ctacacgccg aaaaaccaag tcgccgaatt
     3181 cacgcaaacc ggcaacgcct cgtggtacgg cggcaggttt cacgggcgca aaacttccgg
     3241 cggagaacga tacgatatga acgcctttac cgccgcccac aaaaccctgc ccatccccag
     3301 ctatgtgcgc gtaaccaata ccaaaaacgg caaaagcgtc atcgtccgcg tcaacgaccg
     3361 cggccccttc cacggcaacc gcatcatcga cgtatccaaa gccgccgcgc aaaaattggg
     3421 ctttgtcagc caagggacgg cgcacgtcaa aatcgaacaa atcgtcccgg gcaaatccgc
     3481 accggttgcc gaaaacaaag acatctttat cgacttgaaa tctttcggta cggaacacga
     3541 agcacaagcc tatctgaacc aagccgccca aaacttcgcc gcttcgacat caagcccgaa
     3601 cctcgccatt gaaaaacgcc gttacgaata cgtcgtcaaa atgggtccgt ttgcctcgca
     3661 ggaacgcgcc gccgaggccg aagctcaggc gcgcggtatg attcagacgg tattgaccgc
     3721 cggttgatgt cccgccttta cgtctttcaa acaccaccag atacttcgca ggagcaaaac
     3781 atgaacttca aacgccttct cttgaccgcc gccgcaaccg cactgatggg catttccgcc
     3841 cccgcactcg cccaccacga cggacacggc gatgacgacc acggacacgc cgcacaccaa
     3901 cacagcaaac aagacaaaat catcagccgc gcccaagccg aaaaagcagc gttggcgcgt
     3961 gtcggcggca aaatcaccga catcgatctc gaacacgaca acggccgtcc gcactatgat
     4021 gtcgaaatcg tcaaaaacgg acaggaatac aaagtcgttg tcgatgcccg taccggccgc
     4081 gtgatttcct cccgccgcga cgactgaatt tgatacaatc cgtgccgtct gaagcccgaa
     4141 ccggtttcag acggcatttt gcacccgaca cttcaggatt cggcatacat gatcagcaga
     4201 ctgaccggca aactggttga aaaaaaccct ccgcaaatcg tcatcgatgt caacggtgtc
     4261 ggctatgagg ccgacgtatc gatgcagacc ttctacaacc tgccgcccgt gggtgaaagc
     4321 gtacaactgt ttacccagct tatcattcgg gaagacgcac atcttttatt tggttttgcc
     4381 actgcggaag aacgcaaaac attccgccaa ctgattaagg tcagcggcat cggcgcgaaa
     4441 acggctttgg gcattttgtc ggcgatgacg gcagacgagc tggcgcaggc ggttgcagaa
     4501 gaagatgtca aacgcctctc ctccgccccg ggaatcggca aaaaaaccgc cgaacgcatg
     4561 gttttggaac tgcgcggcaa gctggtcgcg catgcggtaa cggacgggct gtttgccgcc
     4621 gcacccgccg ccgacgaaac ggaagacatc gtcggcacgc tcctcgccct cggttacagc
     4681 gaacgcgagg caaaagcggc ggtcaaaggc gttccgaaag ggacggacgt gggcgaaggc
     4741 gtgcgccttg ctttgaaaaa cctgctgaaa taatgccgtc tgaaggcggc gcgacgtttg
     4801 ccctgacgaa accctgcgtt tccgcctcgc gctgtcttcc cgacggcttt tcccgtaaaa
     4861 tggcgttatt gtccttcctt tcagacggca ttgtgtttga tgccgtctga aactgtttta
     4921 ccgaaatcga aaacaatgtt gaacaaaata ttttcctggt tcgagtcccg aatcgaccct
     4981 tatcccgaag ccgccccgaa aacgccagaa aaaggcttgt ggcggtttgt ctggagcagc
     5041 atggccggcg tgcggaaatg gatagccgcc ctggctgcgc tgaccgccgg catcggcatt
     5101 atggaagccc tggtttttca atttatgggc aaaatcgtgg agtggctcgg caaatacgcg
     5161 cccgccgaac tgtttgccga aaaaggttgg gaactggcgg caatggcggc gatgatggtg
     5221 ttttcggtcg tgtgggcgta tgccgcgtcc aacgtgcgcc tgcaaaccct tcagggcgtg
     5281 ttccctatgc gcctgcgctg gaacttccac cgcctgatgc tgaaccaaag cctcggtttt
     5341 tatcaggacg aatttgccgg acgcgtgtcc gccaaagtca tgcagaccgc gctggcgttg
     5401 cgcgacgcgg tgatgacggt tgccgatatg gtcgtttatg tgtcggtgta tttcattacc
     5461 tccggcgtga ttctcgcctc gctctactca tggctgctgc tgccctttat cggctggatt
     5521 gtcggtttcg cttcggtgat gcgcctgctg attcccaaat tggggcaaac cgccgcatgg
     5581 caggcggatg cccgctcgct gatgaccggc cgcattaccg atgcctattc caatatcgcc
     5641 accgtcaaac tcttctccca cggcgcgcgt gaagccgcct atgccaagca gtcgatggaa
     5701 gaatttatgg ttacggtgcg cgcccaaatg cggctggcga cgctgctgca ttcgtgcagc
     5761 ttcatcgtca acacctccct gaccctctcc accgccgcac tgggcatctg gctctggcac
     5821 aacgggcagg tcggcgtggg cgcggttgct acagccaccg ccatggcgtt gcgcgtcaac
     5881 ggtttgtcgc aatacattat gtgggaatcc gcgcggctgt ttgaaaacat cggcaccgtc
     5941 ggcgacggca tggcaaccct gtccaaaccg cacaccatcc tcgacaagcc ccaagccctg
     6001 ccgctgaatg tgccgcaagg cgcaatcaaa ttcgaacaca tcgatttctg ctacgaagcc
     6061 ggcaaaccgc tgctcaacgg cttcaacctc accatccgcc cgggcgaaaa agtcggcttg
     6121 atcggacgca gcggcgcggg caaatccacc atcgtcaacc tgcttttgcg cttctacgaa
     6181 ccgcaaagcg gcacggtttc gatcgacggg caggacataa gcggcatcac ccaagaatct
     6241 ttacgcgccc aaatcggttt ggtcacgcaa gatacctcgc tgctgcaccg ttccgtgcgc
     6301 gacaacatta tttacggccg ccccgacgcg accgatgccg aaatggtttc cgccgccgaa
     6361 cgcgccgaag ccgccggctt catccccgaa ctttccgatg ccaaagggcg gcgcggctat
     6421 gacgcgcacg tcggcgaacg cggcgtgaaa ctctccggcg ggcaacgcca gcgcatcgcc
     6481 attgcccgcg tgatgctcaa agacgcgccc atcctgctgc tcgacgaagc caccagcgcg
     6541 ctcgattccg aagtcgaagc cgccatccag gaaagcctcg acaaaatgat ggacggcaaa
     6601 accgtcatcg ccatcgccca ccgcctctcc accatcgccg caatggacag gctcgtcgtc
     6661 ctcgacaaag gccgcatcat cgaagaaggc acacacgccg aactcctcga aaaacgcggg
     6721 ctttacgcca aactctgggc gcaccaaagc ggcggcttcc tcaacgaaca cgtcgagtgg
     6781 cagcacgact gaaccgatgc cgtccgaaca cccgttttca gacggcattt ccacacccaa
     6841 ccccaaagaa accatgaacg acaccgccca aattaccgcc agctacggcc gccgctacat
     6901 cgtccgcacg cccgacggca caacctacga agccagcacg cgcaaaaaac gcgtcgattt
     6961 cgcctgcggc gaccgtgtcc gcatcagccc cgtcaacgcc gaacaagttg tgattgaaga
     7021 ttttttaccg cgccaaagcc tgctctaccg ccaagacgcg tggaaaacca aactcatcgc
     7081 cgccaacgtt acccaactcc tcatcgtaac cgccgccgtc ccgagtccga gcatgcggct
     7141 gctgcaacgc gccctgcttg ccgccgaagc cgccggcatc cgcgccgtca tcgtcctgaa
     7201 caaagccgac ctgcccgaaa ccgccctttg gcgcgaaaaa ctcaaattct acgaaacgct
     7261 gggttatccc gtcatcgaaa cccgcgcact ggaaaacgcc ggcagcctgc gccccgccct
     7321 gcaagggcac agcaacatcc tgctcgggca gagcggtatg ggcaaatcca ccctgaccaa
     7381 cgcccttttg ggcagccaaa ccgcccgcac cggcgacatt tccgccgcac tcgactcggg
     7441 aaaacacacc accacccacg cccggcttta tgatttgaac ggcgaaaccc aactcatcga
     7501 ctccccgggt ttgcaagaat ttggtttaca ccacctccaa gccgccgatt tgccgcgcta
     7561 tttccccgat ttccgccacc ttgtcgggca atgccgcttc cacaactgca cccaccgcgc
     7621 cgaacccggc tgcgccttca aagccgccgc gcaaaccggg gcggcaagcc ccgaacgcct
     7681 cgcctttttg cagggcatca ccgacgaact gcccgggtaa cgccttgccg cctgggcgga
     7741 aaaaatgccg tctgaagccg gattcgggtt tcagacggca tccgtttttc aaaaatgcta
     7801 caatccgctt tttactggaa catccgaaac tatgttccaa cacgtaggac gacacttaaa
     7861 gcaccgccct atgtgtcgtc ctgatttgga agggcttaca cccctcccaa ataaagtctg
     7921 attctaccgc cccgaaggac agatgtccaa gtggcggggt ttcaaccgaa aaggaaacac
     7981 gatgaagaaa aacgccccga aatcgtttga agaagccttg tcgcgccttg aatcgctgac
     8041 acaagctatg cagggcgaaa tgcccttgga agacgcgctt gccgcctatc aggaaggcaa
     8101 cgagctggtc agatactgcc aaaccaagct ggcgcaagtc gaacagaaat tacaggtttt
     8161 ggacgcggac gggccgaagg agttgaacct tgaatccgac gaatgatttg aaagcgtggc
     8221 aacagagggc gcaggcgcaa acagagctgc tgctggaacg ctttttgccg tctgaaaacg
     8281 aaataccgca cacactgcac gaagccatgc gttatgcggt tttggatggg ggcaaacgtc
     8341 tgcggccgat gctggttctg gcagcttcgg aattaggcga agccgtgcat gaagcagtag
     8401 aacaggcaat ggcggcaatc gaaatgatcc atgcctattc gttggttcac gacgatatgc
     8461 cggcaatgga caacgacagc ctgcgtcggg gcaaaccgac ctgccacatc aaatatggcg
     8521 aagccaccgc gctactggtc ggcgacgctt tgcaaaccca agccttcgac gtgttaagcc
     8581 gtccgacaga actgcccgcc gcacgccagt tggcaatgtt gtcggtgttg gcgaaagcgg
     8641 gcggcagcgc gggcatggcg ggcggtcagg caatcgattt ggcgaatgtc ggcaaacaaa
     8701 tggttcaagc cgatttggaa cagatgcaca gcctgaaaac gggtgcgcta atccgtgcgg
     8761 cggttttatt gggggcgatg tcctgcccga atctgtctga agacagtctg gcggtattgg
     8821 acgattatgc ggcaaaactg gggctggcgt tccaagtcat tgacgatgtg ttggattgtg
     8881 aagcggacac ggcgacttta ggcaaaacgg cgggcaaaga cgcagacaac gacaagccga
     8941 cttatgtgaa actgatgggc ttggaagcgg cgcgctcata cgcacacaaa ctggttgccg
     9001 aagcggtcgc gctgctcgaa cccttcggcg acaaagccct gcgcctgcgg cagttggcag
     9061 aatttgcagt cgcccgcaaa tattaaaacc ggcgtatatc gccggctgaa acgtgccggc
     9121 acagcgatgc cggcctgcac ttgaatgaaa caaatgccgt ctgaacaggt ttcagacggc
     9181 attcctatgc ctgcctattc cctgttgcgc gtgtgccaaa aataccgcca cacgaaacag
     9241 ggaaacgcaa aaatcaggta caggcagacg acggtggcgt agaactccca accctgatcg
     9301 tgtaccgctc ccgcacggga ttcgaggatg taggcaagaa cggcggtcag cgcgaaacct
     9361 gccgccagct cgatcaagtg gtgcccgaaa tgtttgcgct tgagcggtac gatgccgaac
     9421 agcctggtcg tgaggaaggg ggcgttggca aaaatcaagg caagcagcaa aaggatgtac
     9481 atggatgcgg tcatggcggg ctttctgttt gggcattgtc ggcggcgatg ccgtctgaac
     9541 tgcgttgcgg gacggcatat cttaacaaaa acggcagcct ctgacacggc tgccgttgcg
     9601 gcggcttaca gcgtgttttc caacgccttg gcgcaccagt cgataacggt ttgcggcata
     9661 atgccccaca gcaccaacag cagcgcgttg acgctcaaaa ggaattttgc ggcattgttg
     9721 ccgccgacgg tgggatgggc gcggccggat tcgtcaaaat acatgacttt gaccacgcgc
     9781 aggtagtaga acgcgccaat cagcgacatc acgacggcaa atacggacaa ccaaacatag
     9841 ccttgtttta agagtgccat aatcacgcca aatttggcgt aaaaacccat cagcggcgga
     9901 atgcccgcca tagagaacat aaccagtaac atcaaaaagg caagccatac gcggtgttgg
     9961 ttcagccctg ccaaatcgct gatgttttcg cactcgttgt ccccatccga caacaccatc
    10021 aacacgccga accctgccgc cgccatcagc gcgtaggtaa tggcgtaata gagacccgcc
    10081 gcaaagccga ccgcgcccgc cataaacgcc agcaggataa accccatatg cgatacggtg
    10141 gaataggcga gcatacgttt gatattggtc tgcatgatgg cggcaaggtt gccgaccagc
    10201 agcgaggcgg cggcaagcag ggcaaacatc agagaccagt catgatgcac ggttcccaac
    10261 ccggtaacga ggatgcggaa agcgaaaacg acggcggcga ttttcggggc agtgccgact
    10321 agggcggtaa cagaagtggg cgcaccgtga tacacgtcgg gcacccacat atggaacggc
    10381 accgcgccga gtttgaacgc aacggcgacg acgataaaca ccagacccag tttcaacagc
    10441 cattcgtttg cttcttcatt gaaggaagag gcgagcacgc cggcaaattc cagcgaaccg
    10501 gttgcgccgt aaaccataga aataccgtag agtagcagac cggatgccag cgcgcccaga
    10561 acaaaatatt tcaaggcggc ttcggcggca aagccggaat cgcggcgcag ggcaatcagg
    10621 gcgtaaaggg caagcgacaa gagttccaaa ccgatatagg cagttaaaaa atgccccgcg
    10681 ctcaccatca cgctcatgcc caagagggca aacagcgaca gggtgtaaaa ctcgccttta
    10741 aaaataccgc gcacttggtt gtagggcttg gcatagacaa acagggtaaa catcaaggca
    10801 tataaaacca tttttgccaa acgcgacata ccgtccgcaa tatacatccc gttgaacgaa
    10861 gacgtgctgc cctgttccca cacggcaagc tgcaccgccg ccgtaaccgc caccgttgcc
    10921 aacgcgccgt aatgcgtcca acggcgtttg tcatcactga cccacaagtc tgccagcaac
    10981 aataacacca gcagcgacag cagcgcgact tcgggcagtg cgggcatcaa attcaaatca
    11041 gaccaattca tttacacacc tcacatcttg ctttgcgcca cttgggcaat caaatcgttt
    11101 gccgcctgat gcaccacttc gataaatgcg ttcggataca ggcccatacc caataccgca
    11161 accgccaaaa ccgccagaat cgtaaactcg cgacagttga tgtctttcat ttcggcaacg
    11221 tgcggattgt gaatcgcgcc gaaaatcacg cgcttgtaca tccacagggt ataagacgca
    11281 ccgtaaatca gcgtcatagc cgccaacgcg cccacccaga aattcacttt aaccgcgccc
    11341 ataatcacca taaactcgcc cacgaagcca gaagtcgccg gcagaccggc attggccata
    11401 ccgaacaaca tcataaacgc cgcaaactta ggcatcacat tgaccacgcc gccatagtca
    11461 gcaatattgc gggtatgcag gcggtcgtac atcacgccga tacacataaa catcgccgcc
    11521 gacacgaaac cgtgcgaaat catttgaatg attgcgcctt tcaacgccca gtcgtccaac
    11581 tgcccgtcaa caaacaaaaa catcccaagc gttacaaaac ccatatggct gatagacgaa
    11641 tacgccacca gttttttcat atcggtttgc accaaagcca ccataccgat ataaatcacg
    11701 gcaatcaggc tcaatacgat gatcacaggg gcaaaatagc gtgccgcatc cggcataatc
    11761 ggcaggataa aacgcaagaa accatacgca cccagtttca gcgtaattgc cgccaacacc
    11821 atcgaaccgc cggtcggcgc ttcaacgtgg gcatccggca accaagtgtg cacagggaac
    11881 atcggcactt ttacggcaaa tgacaggaag aatgccacaa acaaaagctg ttgtacgccc
    11941 aatggaatct gcttgatgtt ttggaaatcg acaatagaga agctgcctgt ctgatagtac
    12001 aggtaaacca tggcaaccag catcaaaagc gaacccatca gcgtatagag gaacagcttg
    12061 accgacgcat aaacgcggcg cgggccaccc catacaccga taatcaggta cagcggaatc
    12121 agcataccct cgaagaacac ataaaacaga atcgcatcct gtgcggcaaa cgcgccgtta
    12181 atcaaacccg acatcatcag gaatgccgcc atatactgcg ccggacgttt ctgaataact
    12241 tcccaaccgg ccaataccac caacagcgta ataaacgcat tcaagatgat aaagagcact
    12301 gaaataccgt ccacgcccaa tgcatagttg attttcagca gcggaatcca ctcgtggaac
    12361 tcggtaaatt gatagccgcc gctcaaacgg tcgaaaccgg taaacagggg cagcgttacc
    12421 aagaaaccgg caagcgcacc catgaaggca agcacacgcg ccagcggcgc acggctgtcc
    12481 gaccccgttg ccaaaaccag cacacctgcg gcgatgggta tccatattgc caagctgagt
    12541 aggtagttgg aaaacatagt ggttaacctg tggttaaaat aaaaatatcg ttgtacgggt
    12601 tggtttgtca gacgacgttt taagagaccg tctgaagcct catccttatc tgaacaatcc
    12661 ccagaaggtc atgccgagca gtaccaatac gccgaacacc atagcggcgg cgtaggtgta
    12721 gataaagccg gtttgggctt tacgcacttg cgcggcaatc gcgccgacca gtttggcaga
    12781 gccgttgacg atgccgttat cgataatggc ggtatcgccg actttccaga agaaggtacc
    12841 cagtgcgcgc gtgcctttag cgaagacgtt gaaatacagg gcgtcgaggt agtatttgtt
    12901 ttcaaacaaa acgtaaaccg gacggaacgc ctgtgcaatt ttcgcaggca ggtgcggcag
    12961 tttgacgtac aaaagccatg cgctcaatac acctgcgata gcgaggtaga gtacaggaga
    13021 atgcaggctg tgcgacacca ttgccaatgc gccgtggaac tcttccttca tgatgtgcat
    13081 ggtcggatgc gcgtcggtat tgacgaaaat cacgtctttg aagaaatcgc cgtaaagcat
    13141 aggcccgatg gcaacatagc cgatgatgac ggacggaatg gcaagcaaaa tcaaaggcag
    13201 ggtaacgaac agcgggcttt cgtgcggatt gtcgtttttg cccaagccgt gatgttcttc
    13261 gccatgtccg tctgaatggt gttcgggcag gctgcgccat ttctcttcgc cgtggaacac
    13321 cataaagtat tggcggaacg cgtaaaacgc ggtaacgaac acgctggcaa ggacggcaaa
    13381 ataggcaaag ccgctgccgg gaagggtgct gtatttcgcc gcttcgataa tcgaatcttt
    13441 ggagtaaaag ccggagaaga acggcgtacc aatcagcgac aagttaccga tcaacatggt
    13501 caaccaagta atcggcatgt attttttcag gttgcccatg tggcgcatgt cttggtcgtg
    13561 atgcataccg ataatcgcgc tacctgcggc caagaacaac aaggctttaa agaaagcgtg
    13621 ggtcatcaca tggaacatcg ccacggaata ggcagacgcg cccagagcca cagtcatata
    13681 gcccagttgc gacagggtgg aatacgcaac cacgcgcttg atgtcgtttt gaatcacgcc
    13741 caagaaaccc ataaacaggg cggtaatcgc accgattacc atgatgacag acagcgcagt
    13801 gctgctcatc tcataaatcg gcgacatacg cgataccatg aacagaccgg cggtaaccat
    13861 ggttgcggcg tgaatcaatg cagaaatcgg ggtcgggcct tccatcgaat caggcagcca
    13921 gacgtgcagc gggaattgtg ccgatttacc catcgcaccg ataaacagga gcaaacaggt
    13981 tacagtaatc aaagaccatt ccacactggg gaacaattga atggtggccg tctgaacatt
    14041 aggcagataa gcgaatacat cttgatagcg caggctgccg ccgaaatagg caagcaccaa
    14101 gccgataccg agcaaaaagc cgaagtcgcc gacacggttg atcaaaaagg ctttcaggtt
    14161 ggcaaatgtc gcgctcggac gtttgaaata gaaaccgatc aagagatacg acaccaagcc
    14221 caccgcttcc caaccgaaga agagctggat gaagttgttg ctcataatca gcatcaacat
    14281 actgaaagta aacaaagaaa tatagctgaa gaagcgttgg taaccgactt tttcatcgtg
    14341 catatagccg atggtgtaga tatgcaccat caacgacacg cccgttacca cgaccatcat
    14401 catcgccgtc atcgtatcga ccaagaagcc gacggaaaaa tccaagccgc ccattgtcag
    14461 ccaggtataa acgttctcgt caaacttggc acggctgccg tcaataaagc cccacaacac
    14521 ataagccgac agcacggcag acaccgccac accgagtatc gtaaccgtat gcgcgccggc
    14581 acgtccgatt ttgttgccga ataaacccgc aatcagcgag cctgccaaag gcacgagggc
    14641 gatgatgaga tataaagtca tgtcgttcat ttaaatttgc accagtaaaa tataaatgct
    14701 gattgcgatt aaactaaaaa tcgtaccata cgcaatcata gaagccgaac gccctgtttt
    14761 caaatatgcc gtttccaaca caataatatt ggcagcaggc ggcagcaacg gtattaaata
    14821 caatgttttt tggttttcaa gaatcaactt caagtcaaaa tatgcagcta tttggataaa
    14881 aagaaaaaca atccctataa ataaaatgtt t
//
LOCUS       DAWEYF010000034        14772 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.034, whole genome shotgun sequence.
ACCESSION   DAWEYF010000034 DAWEYF010000000
VERSION     DAWEYF010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14772
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.034"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(24..719)
                     /locus_tag="WGN93_000760"
     CDS             complement(24..719)
                     /locus_tag="WGN93_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ0226689.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(890..1549)
                     /locus_tag="WGN93_000761"
     CDS             complement(890..1549)
                     /locus_tag="WGN93_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ0226690.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            complement(1747..3858)
                     /locus_tag="WGN93_000762"
     CDS             complement(1747..3858)
                     /locus_tag="WGN93_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0226691.1"
                     /translation="MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGMDYSREHRNPTLGYSRAFTASIDPYD
                     RASWPASGRLQPILTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GNSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSIDTSSSAVFNAD
                     PEYTRQYETGVKSSWLDDRLSTTLSAYQIERFNIRYRPDPKNNPYIYAVSGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYDSRNKEVTTLPGFARVDAMLGWNHKNVNVTFAAANLFNQKY
                     WRSDSMPGNPRGYTARVNYRF"
     gene            complement(4044..4649)
                     /locus_tag="WGN93_000763"
     CDS             complement(4044..4649)
                     /locus_tag="WGN93_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ0226692.1"
                     /translation="MTRQSLQQAAESRRSVYLLNKNLPIGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLKLFKAGAATILFYED
                     QNVVKGLQEQFPAYASNFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(4699..5097)
                     /locus_tag="WGN93_000764"
     CDS             complement(4699..5097)
                     /locus_tag="WGN93_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ0226693.1"
                     /translation="MSNCCNRIQPVLLSVLRIVTAYLFLLHGTSKFFAFPIEMGSGSP
                     GGLMLLAGILEVVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFFYIAAAGGGAWSLDRLFFKRKA"
     gene            5205..6116
                     /locus_tag="WGN93_000765"
     CDS             5205..6116
                     /locus_tag="WGN93_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ0226694.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLIRNGVPKTPEEVTRLPAVLPTYTNQQKLDITHKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAVEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            6106..7407
                     /locus_tag="WGN93_000766"
     CDS             6106..7407
                     /locus_tag="WGN93_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ0226695.1"
                     /translation="MPSETARPLYADTRAAHTLVWFRQNLRIRDNAALCAAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPNLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDSPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(7475..7699)
                     /locus_tag="WGN93_000767"
     CDS             complement(7475..7699)
                     /locus_tag="WGN93_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226696.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVAAWVAVIWAYLMIESEKNGRY"
     gene            7802..9952
                     /gene="dinG"
                     /locus_tag="WGN93_000768"
     CDS             7802..9952
                     /gene="dinG"
                     /locus_tag="WGN93_000768"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ0226697.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIVRIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            9988..10602
                     /locus_tag="WGN93_000769"
     CDS             9988..10602
                     /locus_tag="WGN93_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ0226698.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGAPVAGAASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRASVTQSDFQPAGETEETYSRTILRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAGWLAAEYRLPASIEDIAASVGNDEILAA
                     EAYLAARLVCADLSRKETVFLARLSQALELDDNLVENLERQLGF"
     gene            complement(10707..12575)
                     /locus_tag="WGN93_000770"
     CDS             complement(10707..12575)
                     /locus_tag="WGN93_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ0226699.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILAEIRDGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSANENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTASSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTENGKQQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFISFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLVEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRIGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLIKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSHGGALQ"
     gene            complement(12655..14025)
                     /gene="purB"
                     /locus_tag="WGN93_000771"
     CDS             complement(12655..14025)
                     /gene="purB"
                     /locus_tag="WGN93_000771"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ0226700.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIVEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAASEFIHFACTSEDINNLSHALMLQEARETVILPKLAEIIGKLTDMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANIVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKVFIESLEIPTEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            complement(14097..14729)
                     /locus_tag="WGN93_000772"
     CDS             complement(14097..14729)
                     /locus_tag="WGN93_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ0226701.1"
                     /translation="MENVNRVPEQARYDAERRQADEVLAGVFPAVSIFGSARTPQNHA
                     DYTFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYIVMPGGFGTLDELFEILTLVQTGKVPPRPVVLVG
                     KAFWSGLAEWINAQLLARGLISEGAASLFAISDDEDEIVAYLSEHGLQTA"
BASE COUNT         3527 a         4105 c         3804 g         3336 t
ORIGIN      
        1 cctttactca ttcaatcctc aacttattgc ggctttttct gctcttcgcg tactttatcc
       61 accaactggt caatcgtggt cataccggac tgccagtctt taaattcaac ttggtatttg
      121 ccgccgacaa tcacagtcgg tgtgccgctg atttggaatt tattggtcaa ctcttccatt
      181 tgagccgcac gcgcttggct ttcaggagcc tcaaatgcag ccaatacttt tttgccgtca
      241 aacgctgttt gctcggacag ccattttttc agggtatcgg tatcggccag attgattttt
      301 tgattaacca tcgcatcgaa aatatggctg ttggctttat ctgattcacc ggccatttcc
      361 actgcggccg ccaaacgtgc caaaggtttc atttcatcac cccacacgac atgctcccgg
      421 cgcatatagg tatcgtcttt aaacgttttg atgtgctcgc tcaagaccgg ctcaagatgg
      481 gcgcaatgcg ggcagaagta gccgaaaaat tccaatactt cgattttacc ggcctgctgt
      541 tgcggaatag gcgtagacaa tacagtgtag ttcacacctt cgttcaactc agcaggggct
      601 gccggagcag atgagctgct ttggacgctg tctgccggaa cgctggtttc agcctgtttg
      661 ctacaagcgg ccaatgccaa cagggtcaat gaagtcaaag ctaaggtttt cagtttcata
      721 ggtatctctt gtgtgtcaga ttaatgtgcg gattttatga cattttattg aaggcgtgtt
      781 cgatttgagt gaaaaaatgt gtttagtttt atttcagcct ttataaaggc cgtctgaaat
      841 atggcttaga taattagcct tattttcaga cggcctttgt tctagtaatt tacggtttcg
      901 gacattttgt cttcaatccg tcgatgtgtt ccattaagtc aggtgggaca tgattccaca
      961 taggatcaag aataaaatcg ataccttccc gtctggctaa tttggctgct gggacaaaat
     1021 cggaatcacc agaaaacaag atgattttat cggcttgttt ttttaaggta atagatgaaa
     1081 tatccaagcc tatacgcata tctacacctt tttgtttaac atcgagcacg acatcgtttt
     1141 ccgtaatttg agttgacggg tttttcagaa gatttttcat gacttggggt tttaatatcc
     1201 atgctgtatt gtccgacagc ttgcctaaac gtaacgctaa tttacgcttc ttcttcaatt
     1261 cggtatgcag attgcaacga aatatggctt ccggagtctt tgaaaaatct atggcacgat
     1321 gagatacggg attgtgcatt ttcttttcaa acggcacgca gtcgtaaaag aaaattctat
     1381 ataaatcatc catttgatct gtgccgttga ttttatcttt cagatgcagc atcgaatatc
     1441 ggaaagccaa atcagcaatt ctttttgcat cgtgtggatt ttgagacagg cctaatgacc
     1501 gtacccgctt aataaaaaat gcaccgtcaa tcaaaatggc ggttttcata ttgcttcccc
     1561 tatatttgtc aaagatataa aaaagccctt gggatcggca tacccgctat gatttaatgg
     1621 gtaatgcgta ctgccaaggg cactatttct ttttggatta tactgatgta gataaagcct
     1681 gtcaaaaagt tcgtatgctg aatttacgga ttatcaggat tttcagacgg cctttgcctg
     1741 atttcatcag aaacggtaat ttacccgggc agtatagccg cgcggattac ccggcataga
     1801 gtccgaacgc caatattttt gattgaacag attggctgcg gcaaaggtaa cgttaacatt
     1861 tttatggttc cagccaagca tggcatcaac tcgggcaaag cctggaagcg tagtcacttc
     1921 tttatttctt gagtcgtaac cgtagcgttt gcctgtaccg gttacgccga tttcgccgta
     1981 gaggttttcg gtcggtgtat aacggaaaaa caggttgccg gtaacgttgc tggtattatt
     2041 caaatggatg cccactcggt cgggattttc tttatcttca acgactttcg cctgcatcac
     2101 gcccaacgaa ccgcgcagat agagtttttt agggatgatt tgcccgatgg cggacaattc
     2161 cacgccgcgc gaacggtgtt tgccgctaac cgcataaata taagggttgt tttttggatc
     2221 ggggcggtag cggatattga agcgttcgat ttggtaggca gacaacgtag tgctgaggcg
     2281 gtcgtccagc caactgcttt tcacaccggt ttcgtattgg cgggtgtact cggggtcggc
     2341 gttgaacacg gcggaagacg acgtatcgat gctcaaatag ccgccgcgtc cgccataagg
     2401 cgcgaagcct ttgttatacg aggcgtaaag tgtgtggact gggttgatgt tccacactgc
     2461 gccgatgttg gggctgaacg agtgtccgct gtattggcgg ctgttgccgg tgagtttgtt
     2521 ttcggaatta aaggtgtatt tgtcgtaacg accgccgagg acgaatttca agtcgggcgt
     2581 ggcggagaag atgttttgca caaagatgcc gtaggagtcg gctttgtggc ggttttgggt
     2641 gaggataggc tgcaatctgc ccgaagccgg ccagcttgct cggtcgtatg gatcgatgga
     2701 agcagtaaag gcgcggctgt aacctaaggt cgggttgcgg tgttcgcggc tgtaatccat
     2761 gcctacggtc aggtggtttt caaaacggcc gatggtgtag tcgccgttta gcgtgaaatt
     2821 ggacgacagg gttttgttgt cggtctgctg ccaggcgtag ttacgtttga ttaagttgcc
     2881 attttcgctg cctgcataga aatgatcaaa atcctgcgcc gccgtgcggt gggcgagctg
     2941 ccattgggca cgccatttgt cgttgaaggc gtattcaagg tcggaacgcc aaacttgcag
     3001 cttgtctttg acaaaatcgt tccggtgggc gaaccccatg cggtaaggca gtccgaagcg
     3061 gtcgtacacg gacttggtcg gactgcggtc gggcgtgcgc tccacattgt cgtaggtgta
     3121 ttgccccgtc cacttcaagc cgttgtcgag tttgacggta atgctgggcg aaaccatgac
     3181 atttttgctg tctatgccgc tgcggaacga attggcgcgc ccgacttcgc cggtgagacg
     3241 gatggcgacg tttttgttca gcacttcgtt aatgtccata ttcaggctgc ggtttgccca
     3301 cgaaccgtaa accgcaccga tgttgcggct ttgtttgaag ttggcgtatt tgctgaccat
     3361 gttgatgacg ccgccgccgt tggtgcggcc gtaaagcacg gaagacgggc ctttcaggat
     3421 ttccacgcgc tcgatgttgg cagtgctgcg gcggacctgc ccgctttcgc gcacgccgtc
     3481 acggtaaata tcggatgcgt cagcttgaaa gccgcgcagg aaaatgcttt cgccgcgcat
     3541 atcgtaggca gcgtcgatgc cggcattgcc ttcgaggatg gaactcaaat cgttcgtacc
     3601 gtaatttttg tttttctgga tattgagcgt atcgatggtt tgcggcgttt ctttgatgag
     3661 ctgtccgttg cgggtaacgg cggcttcgtc gtagttgatg tagcctttga gtacgctggt
     3721 gtcggactgt ccgaccacgg aaacggtagg tagcgtggcg gtgtaatgtt caccattgtc
     3781 ctgcgtatcg gcggcagcaa cagggaagga agcaataatc agcgtgggta ataaagctaa
     3841 atgaaatgat attttcattt ttatactcaa tttaacaaaa caaccgaatt atattgcctc
     3901 acggaggaaa tgagaataat ttcttttaac tatattgaac atgatttttg taaacaaagg
     3961 tctcagaatg cggaaaactc gccgcctgat actgaaaaat gccgtctgaa cagggttcag
     4021 acggcatttt tttgaccgcg aaattatgcg ccgaacactt tcaaacgttc tgcaactggt
     4081 tcaaaggtct tttcacctgc cgccccttca ataccgccaa taaccatttg cgcgcgcaac
     4141 aaccagtttt cggggatatt ccacgctttg gcaatcgccg catcgggcaa gggattgtaa
     4201 tgttgcaggt ttgcacctac gccgaccgcg gcaagtgtcg tccaaacggc atactgcacc
     4261 atcgcgttcg cctggtccgc ccaaacggga aagttggagg cataagcagg gaactgctcc
     4321 tgcaaacctt tgacaacatt ttgatcttca taaaacaaaa tagttgccgc acccgcctta
     4381 aacagcttca atttttgcgc ggtcggttca aaactgtcgg caggcacgac ggcacgcagc
     4441 gcgtcttcga caaattgcca caccttatca tgctcttcgc caaacagcac gaccacgcgg
     4501 gcagattggg aattaaacga agaaggcgtg tgcaaaacgg cgtgttcgac gatttggacg
     4561 atttcatctt tgccgatggg cagattttta tttagcaaat aaacggaacg gcggctttcc
     4621 gcagcctgtt gcagggattg acgggtcatt tcttttcctt tcaaaaatat tcgcaaaata
     4681 cgcttcagac ggcatagttc aggctttacg cttgaaaaac agcctgtcca gcgaccacgc
     4741 gccgccgccc gccgccgcga tatagaagaa tacgaagcag aacagcaccg cggactcgcc
     4801 gccgttggca atcggaaaca aagcatttcc ggaagcgtgc gccataaaat aggcaaccgc
     4861 catctggccg gacaaaacaa acgcggcagg gcgcgcaaac aggcccaaca ccagcaaaat
     4921 gccgccgacg acttccaaaa taccggcaag cagcatcagc ccgccgggcg aaccactgcc
     4981 catttcaatg gggaaggcga agaattttga cgtaccgtgc aacaaaaata ggtaggcggt
     5041 tacgatacgc aaaacagaaa gcagaacagg ttggatacgg ttgcagcaat tggacataaa
     5101 agctccttcg gtatttatct tcatttcagg cggcagagta tagatgtttc cccttttcaa
     5161 atatatactg cttttattga tacaactttt ccacacaaga aaatatggac accctgttca
     5221 gcctcaaagt tttccgccaa gtcgtccaaa gcggcggctt tacccgcgcc gccgacgcgc
     5281 tcggcatctc caccgcaatg gcaagcaaac acgtcagcca cttggaaaac accgtccaag
     5341 ccaaactcct gcaccgcaac agccgcaatc tcagcctgac cgaagcgggg gaagaatact
     5401 accgacaatg cagttacgcg ctcgacacgc tcgacgatgc cgcgcaaaaa gccgcagggg
     5461 ggacggaaaa accgcagggg ctgctgcgcg taacgatgcc gctgtggttt gccggcagcc
     5521 agatatgcaa ctggctggcg gaataccgcg aacgttatcc cgaagtaaca ttagaactga
     5581 ttttggacaa ccggcacgtc gatttgattg ccgaaggcgt ggatttggcg ttgcgcgttt
     5641 cccaaaccct gtccccgtcg ctgattgcgc gcccgctggc ggaaatcgaa tttgccctgc
     5701 tcgcctcgcc cgacttcctg atacgcaacg gcgtaccgaa aacgccggaa gaagtaacga
     5761 ggctgcccgc cgtcctgccg acctacacca atcagcagaa actcgacatc acccacaaat
     5821 cggacggcaa aaaataccgg cttgagctga cccccgtcat ccgtaccgac aacacgctga
     5881 tgatgcgcga aatgattaag gcgggcgcgt gcatcggtta tcagccgctt tgggcggtgg
     5941 aacacgattt gcgctgcggc acgctggtga ggctgctgcc cggatacgcc gtcccgaccg
     6001 accggctgaa tgccgtttat gcagacaggg cattcttaag cgcgaaagtc cgcagcttca
     6061 tcgattttct gaacgaaaaa atcgccagca ggaaaggctg ccgaaatgcc gtctgaaacc
     6121 gcccgccccc tttatgcgga cacgcgcgcc gcacacacgc tcgtctggtt ccgccaaaac
     6181 ctccgcatcc gcgacaacgc cgccttatgc gccgccgttg ccgaaggttt gcccgttatc
     6241 ggtatttgga ttgacgatgc cgaaacagac aaccctcgcc gcgccgcgtt ctaccgccaa
     6301 tccgccgccg aactcgccca agggcttgca gggcgcggca tcccgctcta cacggcggca
     6361 tcgcctgccg agctcgtccg gctcgccgtc cgcctcaata tccgcgccgt catcgccgac
     6421 gaatcccata cttttgccga caaactcgcc gacaacgccc tttggcatga attggacaaa
     6481 cacggcatcg cgttaacctt cgtcaatgac cgcgccgttt tcggcaaaac cgacctgata
     6541 cccgacggcg gcacggcaca caccgatttc gaccgctacc gcgaagtatg gctcgaccgc
     6601 ttttccaagc agccccccgc cggtccgaac ctattcgcgg cataccgcca acccttcccc
     6661 gaaaaccttt ccgccccgcc gcctgccgcc ctttcagacg gcatcttcct gccgcaaaac
     6721 agcggcgaaa cggcggcttg gcggcagtgg cggcggtttc tcgaacaggc ggattcctac
     6781 tccgttttaa aggatttccc ctcgcgcaaa cacacttcgc tgatgggcgc gtatttgagt
     6841 gccggctgca tctcgccgcg cctgctcgcg cgggaaagcc tcgaacgccg tctgaacgcg
     6901 tgggcggaca acatcatccg ccgcgatttt ttccttcaac ttgccttgca gcacacggat
     6961 gacagccctt cagacggcaa tccggaacac accctgcgcc tgacgctttg gcagcagggc
     7021 cagaccggca ttccgattat cgatgccgcg atgcgctgtt tgcacaaaac cggcagcctc
     7081 caccccgccc tgagacgctt gagcgcggat tttttctgcc acgttttaaa cctcccccgc
     7141 cgcgaaggcg agatatggtt tgcccggcag ctgaccgatt tcgatgcggc aatcaaccaa
     7201 ggcaactggt ggcttgccgc ctcacggcac acctgccccg acattgccgc cgcctcatac
     7261 cgtaccgacc cggacggtac ttttatcaaa cggcacattc ccgaactcgc ccacctgtcc
     7321 gccgacaccg tccacacgcc ttggcggttt gcctgttcgg tcgataccca cggctatccc
     7381 gcctatcctg tcgccggtat tccctaagcg gtacggcaac ctaaaacaaa tgccgtctga
     7441 acttccgttt cagacggcat tgcgtccgaa tgactcaata tcttccgttt ttttcacttt
     7501 caatcatcag gtatgcccaa atcaccgcca cccaagccgc caccgttccc atcgccggca
     7561 aaaaatgctg ccaatccgtc atcggcggca cagggcaacg gccgcattcg atttccgcgc
     7621 cgcccaacaa ccggtacagc aacatatccg caatccaaag caacaacggg tatttcaaac
     7681 gctgcaacca aaaaaccaac cacgtccgca cgattcacct caccccccat tccgacaacg
     7741 atattgtacc gcttccgtgc aatgttaaaa taagcccact tctaccgccg tacaaaacgc
     7801 catgctcacc gatttagaaa aaaacgccat ccgcgaccat taccaaaaca tcggcaaaaa
     7861 cctgcccggt ttccgtccgc gcgcttcgca gcgggaaatg attgcggcgg ttgccaacgc
     7921 tttttcgcgg acgttggcgc gcgaagaagg cggcgagccg cccaagcgcg agggcgagag
     7981 catcgccgta atcgaagggc cgaccggcgt gggcaaatcg cttgcctacc tgctggcggg
     8041 cggcatcatg gcgcagacgc gcggcaagcg gctgattgtg agcagcgcaa cggttgcctt
     8101 gcaggagcag ttggtagacc gcgacctgcc gtttctggtc gaaaaaagcg gtttggaact
     8161 gaccttcgca cttgccaaag ggcgcggccg ctatctctgc ccctacaaac tctatcaact
     8221 gacgcaaagc aatgcccagc aaaacctgct cggctttgaa gcccccgccg tcttgtggga
     8281 cagcaaaccc aagcccgaag aattgaagct gctgcgcgac atcgccgacg aattttccgc
     8341 ccgacggttc aacggcgacc gcgacacttg gccggaaaaa atcgatgacg cgatttggct
     8401 caaagtgacc aacgaccgcc acggctgcct gaaaaccgcc tgtcccaacc gtccggaatg
     8461 tccgttttac ctagcacgcg atgtcttgga aaccgtcgat gtcgtcgttg ccaaccacga
     8521 tcttctgctt gccgacatca gtatgggcgg cggcgtgatt ctgcctgcgc ccgaaaacag
     8581 tttctattgc atagacgaag cgcaccacct gcccaaaaaa gccctcagcc gttttgccgc
     8641 cgaacattca tggaatattg ccgtttggac gctggaaaaa ctgccgcagc tgaccggcaa
     8701 aattgccgcg cttaccgata aagccgaact tgccaacctg gccgacgaag ccgccgcatc
     8761 cttgctcgac agcctgcacg aatggcagtt ccatttggcg gaagagccgt ctttaagtat
     8821 ggggccgtct gaaaacgaca gacgaaccaa cagcgaaccg acttggctgt gggaagacgg
     8881 caaaatcccc gaaggcctcg aaaccaccgt ttccaatacg gccattgctg cgcgcagcct
     8941 gctcaaacac gttgtcgggc tgaacgatgc gctttccgcc gcgcgccgcg aaaaagaaca
     9001 ggacggcgcg ctcctcgacc gcctgaccgg cgagttcggc atcttcatcg tccgtatcga
     9061 acaaatcagc gcggtttggg atttgctctc caccgtcccc ctcgaaggcg aagagccgct
     9121 ggcaaaatgg ataacccgcc gtgccgacga caaaaacgac tacattttca acgccagccc
     9181 catcagcagc gcatcccacc ttgccaacag cctgtggcgg cgtgcggcag gcgcggtatt
     9241 gacttccgcc accctgcaat ccttgggcaa cttcaacctg atgctgcgcc aaaccgggct
     9301 gcaatggctg cccgaaacca ccaccctcgc cctcaaaagc ccctttgact ttgaaaaaca
     9361 gggcgaactc tacatccccc ccatatacgc cagccccaaa gaccccgaag cccacaccgc
     9421 cgccgtcatc gaatggctgc ccaagcttat ttcgcccacc gaagccatcg gcacgctcgt
     9481 cttgttttcc tcgcgcaaac aaatgcagga tgtcgccctg cgcctgcccg gagactacct
     9541 gccgctcttg ctcgtacaag gcgaattacc caaagccgtc ctcctgcaaa aacaccaccg
     9601 ggccatagaa gaaggcaaag ccagcatcat cttcggactc gacagtttcg ccgaaggact
     9661 cgacctgccc ggcaccgcct gcgtgcaagt catcatcgcc aagctgccgt ttgcgatgcc
     9721 tgacaacccc atcgaaaaaa cccaaaaccg ctggatagaa cagcgcggcg gcaatccttt
     9781 tattgaaatc accgtccccg aagccggcat caaactcatc caggccgtcg gccgcctcat
     9841 ccgcaccgaa caagactacg gccgcgtaac catcctcgac aaccgcatca aaacacagcg
     9901 gtacgggcag caattattgg ccggtctgcc gccgtttaaa aggatagggt aaacctaccg
     9961 cccttcccgc aacagaaagg aaaagtcatg aacttcaccc gactgctcaa ccaagtctta
    10021 agcacggttc aaaaaaaagg caacacattc tccgacagcc cgctcaattc attcggcgga
    10081 ggcgcgccgg ttgccggtgc cgcctccatg ctgctgaacg gtaaaaaccg caaaaccatt
    10141 accaaaatcg gttcgaccgc cgctttgggc tacctcgcct accggggcta tcagatgtgg
    10201 cagcaaaaca aagggcgggc atccgttaca caaagcgatt tccaacctgc cggagaaact
    10261 gaagaaacat acagccgcac catattgcgc accatgatag ccgccgccgc ttcagacggc
    10321 atgatagacg aagccgaacg ccggactatc gaacaggaaa gcggcacaga ccccgaaacc
    10381 gccggatggc tcgccgccga ataccgcctg cccgcaagca tcgaagacat cgccgcctcc
    10441 gtcggcaacg atgagatact ggcggcggaa gcctatctgg cggcaagact ggtatgtgcc
    10501 gatttgtcgc ggaaagaaac cgtcttcctc gcccgcctgt cgcaggcttt ggaactggat
    10561 gacaatctgg tggaaaactt ggaaaggcaa ttggggtttt gattcaaaat tccctcccgc
    10621 aggggaggga aaataaaaac cgccgccgcc acgaagggca aacggcggca taggcagcta
    10681 caggcaatat ccggcaacaa ggcgggctac tgcaatgcgc cgccgtggga agatttaagc
    10741 aggcgttcgt gtttgtggaa ttcccgcccc atataataag aaccgaaata ggtcaggtgg
    10801 tcttggtcgc cgtaaagata gcgtccgtgt atttcgaccg tgtttttggg caggtatttt
    10861 tgtgcgtcca cccaatgcac attgggaata tctttaatca aatcaaagac cgcctgattg
    10921 ctcttgccga tgtcgcccat agcctgaatg gggcggagat attggtttgc ggcaaatctt
    10981 ttcaattttt cctccctcag gggcgaacgg ctgattgatg tgttgtttgc aaaaacatag
    11041 acgggtttga cggcggctat ccttttgacg gtttccctga atcgggcttg gaacccgggt
    11101 attaggaagg attgcgcttc aaatctcggc acgggctggc cgcctatcct caaatcatag
    11161 aattgggcaa tgaaaacggc ttcggctttt tcaacttcat cccggtattt tcgacataac
    11221 gggttgtctg ccagcttctc atctacccaa accaaacact ccgaatcgag ggacaggatt
    11281 ttggctttcc acccttcccg gctgccgaca taatccagaa acccccgcag gtgtccggcg
    11341 tgcgagtcgc cgagggtcag gacggtttcc ggaaaatgat tttccgcagc aaggggcgcg
    11401 ccgggcaacg ggcggaggtg ttcctgtttc aatatccccc ttgcgtacag gttgtaaccg
    11461 acaagtatca gggacggggc gagatagagg cagaaaaatg cctttttgaa ggtcatcttc
    11521 cgttttctaa gcggctgttc aaccaaataa taactcaaca gggaaaatcc ggccgtcaat
    11581 gcggcaaccg ccgatacggc aggcagtccg agctgtttgt cgcctgtaat gtaatgggcg
    11641 aaggaaataa aaatccaatg gtacaggtat agggaataag agattttgcc gacaaatacg
    11701 atggggcttg ccgacaggat gcgtgtcgga agtgtcccgt attgcatact ccggataagc
    11761 agcgccgtca gcaggcaggg aaggagcagg gtcattcccg ggataaacgg attgtgtttg
    11821 tcaatcacga acaggcaggc aagcaatgcg ccgaagcaga gtgatgaaag caactgccgt
    11881 tttccatttg ctgtttgctg tttaccgttt tccgtttgcc cataaaccgc cagcagcgaa
    11941 cctgccaaca gctcgggaaa cctcagtgtc gaaaggtaat aagtattggg ttggttgagg
    12001 atgtcggtat aaaacccgct tggcaaaaac gatgaggcag tcaaaatcag aaacaggatg
    12061 atgctgatgt tacgcagcac ccgtagcgat ttggtttttt tgcagcagaa tatcagcaaa
    12121 aggggataca ggaggtaata ctgttcctct accgccaaag accaaatatg cagtacgggg
    12181 ttctcgttgg cactcaaatc gaaatacccc tgctgaaacc ccaaataaat attggacaag
    12241 aaaaccgcag aaagctccac ggttttccgc atttggttga aatcttcgta aaggaagatt
    12301 tgagaggcaa tcaccgaagc cagcgacacg gccgcaataa aggcaggata aatccgctta
    12361 atcctgcggg tataaaaatc ccggaaagaa aaagaaccgt cccgtatttc ggcaagaatg
    12421 atgccggtaa tgaggaatcc cgagatgaca aagaaaatgt ccacccccag gaatcctccg
    12481 ggcagccaac ggttattcag gtggaaaata atgacggata gcacggcgac agcccgcaat
    12541 ccgtcaattt ccggtctgta tcggacagct tgcataaata tcgcccctgt atatccggta
    12601 ttttaaaaat gccgtctgaa cgcgcgttca gacggcatcg gtttcagtaa acgctcaaat
    12661 ccgtttcgcc aacgcttcag ccttgcccac atacagtgcg ggggtcagct caagcaattt
    12721 tgctttggct tcggtaggga tttccaacga ttcaatgaag actttcagca cttcgggcgt
    12781 aatgccgcct ttgccgcgcg tcaggtcttt cagcttctcg taaggattgg cgacaccgta
    12841 acggcgcatc acggtttgaa tcggctcggc aagcagctcc caagtggcat ccaaatcggc
    12901 ggccagcgcg gcggggttgg gttcgagctt gttcagaccg cgcaaatggg cggcgaaacc
    12961 caacacggca tagcccacgc ctacgcccat attgcgcaat acggtgctgt cggtcaaatc
    13021 gcgctgccag cgtgagacgg gcagtttttc cgccaaaaaa cccaatacgg cgtttgccat
    13081 accgaggttg ccttcagagt tttcaaaatc gatggggttg actttgtgcg gcatcgtgga
    13141 agaaccgact tcgcccgctt tgactttttg tttgaagtaa cccaaagaaa tataacccca
    13201 aacatcacgg ttgaagtcga tgagaatcgt gttgatgcgg ctgagtgttt ggaaaaactc
    13261 cgccatatag tcgtgcggtt cgatttggat ggtatagggg ttgaaggtca gaccgaggct
    13321 gatttcgaca aagttgcggc agtgtgtttc ccaatccaca tcgggatagg ccgccatatg
    13381 ggcgttgtag ttgccgaccg cgccgttgat tttgccgagg aactcttgcg cctgaaggat
    13441 tttaaactgg cgttgcaggc ggtacacgat attggcggtt tctttgccca aagtggtcgg
    13501 cgtggcgggc tgcccgtggg tgcggctcat catcgggacg gcggcaaggt cgtgcgccat
    13561 atcggtgagt tttccgatga tttcggcaag tttgggcagg atgacggttt cgcgcgcttc
    13621 ctgcagcatc agggcgtggg acaggttgtt gatgtcttcg ctggtgcagg cgaagtggat
    13681 gaactcgctg gcagcagcga cttcgggcac ttcggcaaaa cgttttttca accaatattc
    13741 gatggctttg acatcgtgat tggtggtcgc ttcgatggct ttgacggcgg ccgcgtcttc
    13801 aagtgagaag ttttcaatca ccgtgtcgat ttcggcaagc gtttcggcac tgaagggcgg
    13861 cacttcgaca atcttcggct cggcggcgag ggctttgagc cagtttaatt cgactttgac
    13921 gcgcgccttc atcagaccgt actctgaaaa aatcgggcgc aatgcttcaa cggattgggc
    13981 ataacggccg tctagggggg aaagcgaggc gatggggttg atcatttcgg catcctgttc
    14041 ggaaaagaca tcaaaaattg ttaaattgtt tgcaattata catcactctc aggacgctat
    14101 gccgtctgaa gcccgtgttc cgacagatac gcaacgattt cgtcttcatc gtccgatatg
    14161 gcgaacaaag aagcggcccc ttcggaaatc aggccgcgcg ccaaaagctg cgcgtttatc
    14221 cactccgcca agcccgacca aaacgccttt ccgaccaaaa cgaccggacg cggcggcact
    14281 ttgcccgtct gcaccaaggt caggatttca aacaattcgt ccagcgtccc gaagccgccc
    14341 ggcatcacga tatatgcttg ggaatagcgg aaaaacaccg ccttgcgttc ggcaaaacgg
    14401 gaaaaccgca aggcgatgtc ctgatacgga ttcggtttct gctcgtgcgg caaaacgatg
    14461 ttcagcccca ccgaaaccga cttcccggca aacgcgccct tgttcgccgc ctccataatc
    14521 cccggcccgc cgcccgaaat aacggcaata cccgaatccg acagccgcct cgccagacgg
    14581 caggcaaacg tataatccgc atgattctgc ggcgtgcgcg cgctgccgaa gatactgact
    14641 gccggaaaca cgcccgccaa tacttcgtct gcctgccggc gttcggcatc gtaacgcgcc
    14701 tgctccggca cgcggtttac attctccatt ccgtcctccg tttaaaaacg gcgattgtac
    14761 cccgtcaaaa ac
//
LOCUS       DAWEYF010000035        14063 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.035, whole genome shotgun sequence.
ACCESSION   DAWEYF010000035 DAWEYF010000000
VERSION     DAWEYF010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.035"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(69..2045)
                     /locus_tag="WGN93_000773"
     CDS             complement(69..2045)
                     /locus_tag="WGN93_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ0226702.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKVLVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIVRVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMYPNMPIYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGETGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WGN93_000774"
     CDS             2194..3033
                     /locus_tag="WGN93_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ0226703.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVVRDLAALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARTRYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3232..4263
                     /gene="gap"
                     /locus_tag="WGN93_000775"
     CDS             3232..4263
                     /gene="gap"
                     /locus_tag="WGN93_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ0226704.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FASKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGKLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4415..5140)
                     /locus_tag="WGN93_000776"
     CDS             complement(4415..5140)
                     /locus_tag="WGN93_000776"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ0226705.1"
                     /translation="MRIPLLAPDNYAFPDPTYALARCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5210..5644)
                     /gene="fur"
                     /locus_tag="WGN93_000777"
     CDS             complement(5210..5644)
                     /gene="fur"
                     /locus_tag="WGN93_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ0226706.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHSEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGGHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            5863..6240
                     /locus_tag="WGN93_000778"
     CDS             5863..6240
                     /locus_tag="WGN93_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ0226707.1"
                     /translation="MNKTLILALSALLGLAACSAERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            6250..7059
                     /gene="dapB"
                     /locus_tag="WGN93_000779"
     CDS             6250..7059
                     /gene="dapB"
                     /locus_tag="WGN93_000779"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ0226708.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(7056..7301)
                     /locus_tag="WGN93_000780"
     CDS             complement(7056..7301)
                     /locus_tag="WGN93_000780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226709.1"
                     /translation="MPRKQLYRISFSVETPPLGHLSFGAVESDFIWEGRNPFQIRTTH
                     RATLYVSSRVLKHMPIRSLSAKCRLNNIFSDGILYGG"
     gene            complement(7319..7729)
                     /locus_tag="WGN93_000781"
     CDS             complement(7319..7729)
                     /locus_tag="WGN93_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226710.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPMPNYSEWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGGRYDLPTGFSIDIVCREIELEFLDQESFN"
     gene            complement(7731..7976)
                     /locus_tag="WGN93_000782"
     CDS             complement(7731..7976)
                     /locus_tag="WGN93_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226711.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(7984..9156)
                     /gene="lpxB"
                     /locus_tag="WGN93_000783"
     CDS             complement(7984..9156)
                     /gene="lpxB"
                     /locus_tag="WGN93_000783"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ0226712.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLKRYPAARFLLPAATEATKRRLAEILQRSEFAGLPLTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQHDAVPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(9204..10196)
                     /locus_tag="WGN93_000784"
     CDS             complement(9204..10196)
                     /locus_tag="WGN93_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ0226713.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            10690..13449
                     /locus_tag="WGN93_000785"
     CDS             10690..13449
                     /locus_tag="WGN93_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ0226714.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRSE
                     RGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSENATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         3542 a         4553 c         3291 g         2677 t
ORIGIN      
        1 tgcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg acggacggtt
      301 tcgccggttt caccgaatcc cgcttcgtcg tcgctgccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 atgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg taaccaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgttttg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 acaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca ataccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aagatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatgc cggcaacgaa tgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacgggacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaacac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccgatgc tgaacatcag gaacacaatc
     1861 ccgatttcac ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcatagacc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgcattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcgtc
     2341 cgcgaccttg ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg cgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgcac gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acgcccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat acctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ctgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa ccctcaacaa aggaacgaac catgggcatc
     3241 aaagtcgcca tcaacggcta cggacgcatc ggccgccagg ttttgcgcgc catctacgac
     3301 tatcagattc aagaccaact ccaaatcgtc gccgtcaacg ccagcggcag ccttgaaacc
     3361 aacgcccatc tcaccaaatt cgacaccgtg cacggacgct ttgaagccga cgtatcccac
     3421 gacggcggca acctcatcgt caacggcgac aaaatcccct tcttctcgac ccgcaaccct
     3481 gccgaactgc cgtggaaaga actcggtgtc gatttggtca tggaatgcac cggcgcgttc
     3541 gccagcaaag aaaaagccaa agttcatctg gaaagcggcg cgaaaaaagt cctcatttcc
     3601 gcaccgggcg gcgacgatgt cgatgcaacc gtcgtgtacg gcgtgaacga cagcatcctg
     3661 accgccgaca tgaccgtcgt ttccaacgct tcctgcacca ccaactgcct ctcgccggtt
     3721 gccaaagtgt tgagcgaaag cgtcggcatc gtcaaaggcg cgatgaccac catccacgcg
     3781 ctgaccaacg accaaaccgt taccgacgtg cgccacaaag acctgcgccg cgcccgcagc
     3841 ggcgtggaaa acatgattcc gaccaaaacc ggcgcggcaa aagccgtcgg tttggtactg
     3901 cccgaattga aaggcaaact cgacgggctt gccatccgcg tgccgaccgt caacgtatca
     3961 ttggtagatt taagcttcca agccgcgcgc gacacgacag tcgaagaaat caacgcactg
     4021 atgaaagccg cctcggaagc aggcgcgctc aaaggcgttt taggctacaa caccctgccc
     4081 ttggtttcca tggacttcaa ccacaccacc gaagccagcc acttcgacgc aacactgacc
     4141 aaagtcgttg acggcaacat gattaaagtc ttcgcatggt atgacaacga atggggcttc
     4201 agctgccaaa tgctgaacac cgcacgccgt atgttcggac ttgaagtgcg cccgctcaaa
     4261 taagcaataa accgtcaaac aaaatgccgt ctgaaacccg atgttttcaa gttccagacg
     4321 gcatttttca ttttttggca gtgattttgc ccggctgtcg ccatttccaa ttttaatcca
     4381 ccatatttga acctgaccgg agcataagcc gccatcaaag ccccttgcac gccacttcgc
     4441 gccgcccgat ttcctctttc aacggcacgg cgttcaacat ccgcagacgt tcggcaaaat
     4501 ccgcaaacgg cagcagctcc gaaccgaaac ggcgcatatg ttccgtgtcc tgctggcagt
     4561 ctatcagttc cacacccaaa tccgccaaaa acggcacggc gcaggcaaac gcgattttcg
     4621 acgcatccgg ttgtaatgcg aacatcgatt cgccgtaaaa caccctgccg atttgcacgc
     4681 cgtaaaagcc gcccgccaac ctcgtttcac cgctttcatc gggataatgg cactcgaacg
     4741 aatgcgcgtg tcccatttcg tgcagcttca aatatgccgt ctgaaactcg ggcgcaatcc
     4801 aagttccgtc ctgattcggg cgcgccgctg ccgcacaatg cgcgaccact tccgcaaaac
     4861 agccgttgac cgcaacccga tagctgccgt tgcgcagcgt tttcgccagc gagcgcggaa
     4921 cgtgcagacg ttcgggaaca atcaccgcac gcgggccgac cgcataccaa aaaaaccaac
     4981 cgtcccgaga aaaccacgga aacacgccgt tccgatacgc ctcgagcagc cgccccgcat
     5041 ccaaatcgcc gctcacgccg accagcccgt cgcaccgggc caaagcatag gtaggatcgg
     5101 gaaaggcata attgtcaggg gcaagcagcg gaatacgcat ggcagttctc caaaaacaca
     5161 gacggcatcc aaaatcatga atgccgtctg aacaacaaac cgtccggatt taacgtttgc
     5221 ccttggcctg acagtcgctg cacacgccgt acatataaag cgcgtgatcg acgatgcggt
     5281 agccgttttc ctcagcgatt ttgtcttgca gggcttcgat ttcgggattg tggaattccg
     5341 ttacctcgcc gcacttcacg cagacgatgt ggtcatggtg gccgcctttg tccaactcat
     5401 aaaccgcctt gcccgtttca aaatgatggc gttgcagaat acccgcctgc tcaaactggg
     5461 tcagcacacg gtaaatcgtc gccacaccga tttccacacc ctcttccaac aaaatgcggt
     5521 acacatcttc cgcactcaaa tgctcttccg aatgcgtctc gaacaaatcc aaaatcttca
     5581 aacgcgggcc ggtaaccttc agaccgctgt ctttcagttg tgcaatattg ttgaattttt
     5641 ccataatatt caatacccct gtaaaacaat agacgttata atacgcaatt tcggcctgtt
     5701 tgcccactat cgcaccatag cagtttgcaa tagtaaaacc gcaccggcgg ccgatgcgcg
     5761 gacagggcgg ataccgctta atcgtatgat tatcgttcgc ttttataaaa tattcaagca
     5821 gtgttacact acccatcccg atttgcacag aaaggcattt ccgtgaacaa aaccctcatc
     5881 ctcgcccttt ccgccctcct cggccttgcc gcgtgcagtg ccgaacgcgt ttcactgttc
     5941 ccctcgtaca aactcaaaat catacagggc aacgaactcg aaccgcgcgc cgttgccgcc
     6001 ctccgccccg gcatgaccaa agaccaagtc ctgctcctgc tcggcagccc catactgcgc
     6061 gacgcattcc ataccgaccg ctgggactat accttcaaca cctcccgcaa cggcatcatc
     6121 aaagaacgca gcaatctgac cgtctatttt gaaaacggcg tactcgtccg caccgaaggc
     6181 gacgtcctgc aaaacgctgc cgaagccctc aaagaccgcc aaaacacaga caaaccataa
     6241 ggaacacaca tgacaccgct caaaatcgcc atcgccggcg caaacggccg tatgggacgc
     6301 gtattggttg aagccgtcaa caaccatccc gacaccgtcc tttccggcgc gctcgaacac
     6361 tcgggctcag aagccctcgg gctggacgca ggctacgccg tcggactcaa aaccggcatc
     6421 gccatttcag acgacgttga cgccgttctc gcacaaagcg acgtactcat cgacttcacc
     6481 cgccccgagc ccaccctcaa acacctgcaa aaatgcgttg aaaaacaagt caacatcatc
     6541 atcggcacaa caggcttcga cgatgcgggc aaagccgcta tccacactgc cgccgaacaa
     6601 acaggcatcg ttttcgccgc caacttcagc gtcggcgtca acctcacctt ccacatcctc
     6661 gacaccgtcg cacgcgtatt aaacgaaggc tacgacatcg aaatcattga aggccaccac
     6721 cgccacaaag tcgatgcccc cagcggcacc gcgttacgca tgggcgaagt catcgccggc
     6781 gcgctcggca gagacctcaa acaatgcgcc gtttacggcc gcgaaggcca caccggtccg
     6841 cgcgatccgt cgaccatcgg ctttgccacc gtccgcgcag gcgacatcgt cggcgaccac
     6901 accgccctct tcgccaccga cggcgagcgc gtggaaatca cccacaaagc cggcagccgc
     6961 atgacctttg ccgccggcgc cgtccgcgcc gcagtttggg taaacggcaa aacgggtttg
     7021 tacgatatgc aggacgtact cgggctgaac aaccgttaac ccccatacaa aatgccgtct
     7081 gaaaagatat tgttcagacg gcattttgcc gacaggctcc gtatcggcat atgtttcaac
     7141 acacgggacg atacataaag cgtcgcccta tgtgtcgtcc tgatttggaa gggattacgc
     7201 ccctcccaaa taaagtctga ttctaccgcc ccgaaggaca gatgtccgag tggcggggtt
     7261 tcaaccgaaa aggaaatacg ataaagttgc ttgcgcggca tgacaagtta cggctcgttt
     7321 aattaaaact ctcctgatct aaaaattcta actctatttc ccggcaaact atatctatac
     7381 taaaaccggt cggaagatca tacctaccgc ctatcacttc cagcgcacct ccataatcca
     7441 agatttcatc atcctgcttt aattctccaa gttccaatac atttttgata tttttatctt
     7501 ggttcttcgt ggcgtatcca tagataaatt tcagatagct gaactgcttg aatttaattt
     7561 ttacccattc tgaataattg ggcataggga tctcttgagg aaagtccgga taatccacat
     7621 tctggacgat gatatggaat tcatcgtttt tcaaagtata gtttaataga gtgccctcat
     7681 atatatacag aaattgataa tctttttttg gaatggtata agttgtcata ttattttacc
     7741 ttttcaaaaa caatgagttt aagatttttt gagtccaagt tggttctact actcttatga
     7801 aatttcagtt gtttaaactc ttcctttaac agaccattat attttaacct taatcccact
     7861 cgagccagtt ctgcttcatt tggaattcct cttaaatact tattgtttga tgtgccatta
     7921 atcacaattt ctcccccttt ttttgtaata cgtgctgctt cgggaaaata atccattaac
     7981 cgctcaacat cccgcctctt ccaaaaccgc gcgcgcggcc aaatccgccg tatctttttt
     8041 caacagcagg tgcaacgccc tgaaatcctg ttgcagcgcg gcaaccttat cggggtgttc
     8101 gtaccagtcc gccaacgccg ccgccagttt ttccggtacg gcatcatgtt gaagcagctc
     8161 cggcacagcc tccttaccca acaggatatt cggcaggcca acatgcggca ctttgatttt
     8221 gcgtttcaca taagcataag tcagcggcga aatcttgtag ctgatgacca tcggacgctt
     8281 gcacagcgcc acttccaaag tcgccgtacc gctcgttacc agcaccgcat ccgccgccct
     8341 gcacaccgtt tcagactgtc tgtcggttac cgtcagcggt aatccggcaa actccgaacg
     8401 ctgcaaaatt tccgccaaac gccgcttcgt cgcctccgtt gcggcaggca gcaggaagcg
     8461 tgcggcggga tagcgtttca acaacaataa tgccgtctga aaaaacaccg gcgccatata
     8521 gtcgatttcg ctgacgcggc tgccgggcag cagggcgaat acggggatgc cggcatccac
     8581 gcccaaagtt tgccgcgccg tttcacggtc gtcttccaag ggcataagct gcgccatcgg
     8641 atgaccgaca aactccgcac gtccgcccgc atcgagataa agctgcggct ccatcgggaa
     8701 caggcacagc acgcggttga cctgatgcac gattttgccc acgcgttccc gccgccacgc
     8761 ccacaccgac gggctgacat aatgcacggt cggaatgccc gcccgtttca gcttttccgc
     8821 cacacccaaa ttgaaatcgg gcgcatcgat accgacaaag acatcaggtt tcaacgacag
     8881 caaatcccgt accagccccc tgcgtatccg taaaatttcc ggcagccgcc tgaccacttc
     8941 gacaaagccg cgcaccgcca gccgctcctg atcataaagg ctctcgaaac cttccgcctt
     9001 catcagttcc ccgccgatgc cggtaaaccg cgcctgcggg caacgcttgc ggatggcgcg
     9061 tatcaggtgc gcccccaaca ggtcgcccga cgcttcgccg acactgacgg caatcaaagg
     9121 gcttttttta tcaaccatat tcgtctgtcc ccacatactt tcacgtcccg atgccgtctg
     9181 aaggcttcag acggcatcgg ggttcacatt ttcgtcccgt tttccaacat caccgcaaac
     9241 tgcgccaagt ccggcggcag ctccgccttc aacaccagcg gctcacccgt gagcggatgg
     9301 ttcaagtgca gctcggacgc gtgcaaaaac atccgcttca aacccaactt ctgcaaacga
     9361 cggttcgcct gataatcgcc gtagcgttcg tcgcccgcaa tcggacagcc ttgagattgc
     9421 aggtggacgc ggatttggtg cgtgcgcccc gttttcaacg tcgcccgcac caaagtcagg
     9481 tgcgacagcc cgacaccgtg caaaatgccg tctgaaaaac ggcttaacac acggaacacc
     9541 gtatgcgccg actgcccgtc cgcactgacg cgcaccatct tttcgccttg tgcgccggta
     9601 tatttgaaca ggggcagttt gacatggaaa ttgtcgtccg gcagtttgcc cacccccagc
     9661 gcaaggtaga tttttttggg gtggtcgtta cggatggctt cgtgaagttt gacgagcgcg
     9721 ctgcgtttct tcgccaccat caacaagccg ctcgtatcct tgtccaaacg atgaaccaac
     9781 tccaaatact tcgcctccgg acgggcgcgg cgcaactgtt cgataacgcc gaaactcacg
     9841 ccgctgccgc cgtggacggc aacgccggac ggtttgtcga tcaccaaaag cgcatcgtct
     9901 tcgtaaacaa cgtcaaacgc acgcgccggt acggcggcac gcctttcaga cggcatttcc
     9961 ttctccgcca cgcgcacagg cggaatccgc accgtatccc cctccgcaat acggctgtcg
    10021 ggtttgcagc gttttttgtt cagccgcacc tcgccggcgc ggataatgcg gtggatatgg
    10081 ctcttgggaa cccccttgag gatttttatc agatagttat caaggcgttg acccgcctca
    10141 tgttcggcaa cccctatcaa gctgaccgaa tctttgctta tttcgtgcgt tttcatctat
    10201 aatccgaaca tccgtttcag caaaaagcgc gcccgccgcg cctcctgaaa cggtttactt
    10261 taaaacggaa ttttatatta aaaacgcact ccgcaaagca ttttccctgc gcctgttccc
    10321 agccggcagg cgcagaacgt aatcaagttt gaattgattt tgccgtttcg gcgcggaagt
    10381 aagacggcag ccgggcccca agtcccaaac gcaaaccgcc cgaaaacaca ggcatcacga
    10441 taacaagaag aagccggcac ccatttttcc gaccataccg ctcggaacgc ggcagacaga
    10501 ccgccgcatc gatctttatt gccttcttta tccgaccctt ccgcacacgg ttcctcggaa
    10561 cgtgcatccc tgcggatttt caactcaaaa actgattacc ggttttatcc gaagacatcg
    10621 gaaaacccag ccttacggaa tgccgaaccg gaccggcgcg cccgaatgcc gcccgtccac
    10681 gaggtgatca tgaaaagaat gttattcaac gcaacgcagg ccgaagagct gcgcgttgcc
    10741 attgtcgatg gccaaaacct tttggacttg gacatcgaaa cgctgggcaa agaacagcgt
    10801 aaaggcaata tctacaaagg tatcattacc cgcatcgagc cgtcgctgga agcgtgtttc
    10861 gtcgattacg gaaccgaccg ccacggcttt ttgccgttta aagaagtctc ccgctcatac
    10921 ttccaagact acgaaggcgg acgcgcgcgc atccaagacg tgctcaaaga aggcatggaa
    10981 gtcatcgtcc aagtcgaaaa agacgagcgc ggcaacaaag gcgcggcgct gaccaccttc
    11041 atcagcctcg ccggacgcta tctggtattg atgccgaaca acccgcgcgg cggcggcgta
    11101 tcccgccgta tcgaaggcga agaacgtcaa gaactcaaag ccgctatggc gcaactcgac
    11161 attccgaacg gcatgagcat catcgcccgt accgccggca tcggccgcag cgcggaagag
    11221 ttggaatggg atttgaacta tctcaaacaa ctctggcagg cgattgaaga agcaggaaaa
    11281 gcgcatcacg acccttacct gctctttatg gaaagctcgc tgctcatccg cgccatccgc
    11341 gactatttcc gccccgacat cggcgaaatt ctggtggaca atcaagaagt ttacgaccaa
    11401 gttgccgagt tcatgagcta cgtcatgccg ggcaatatag gccgtctgaa actctacgaa
    11461 gaccacacgc cgctgttttc ccgcttccaa atcgaacacc aaatcgaaag cgcgttttcg
    11521 cgcagcgtca gcctgccctc cggcggcgcg atcgtcatcg accataccga agccctcgtc
    11581 tccatcgacg tgaactccgc acgcgccact cgcggcgcag acattgaaga caccgcgttc
    11641 aaaaccaata tggaagccgc cgaagaagtc gcccgacaaa tgcgcctgcg cgacttgggc
    11701 ggcttggtcg tcatcgactt catcgacatg gaaaacccca aacaccagcg cgatgtggaa
    11761 aacgtcctgc gcgacgcgct caaaaaagac cgcgcccgcg tacagatggg caaactctcc
    11821 cgtttcggcc ttttggaatt gagccgccaa cgtttgaaac cggctttggg cgaaagcagc
    11881 cacgtcgcct gtccgcgctg cgccggcacc ggcgtgattc ggggcatcga atccaccgcc
    11941 ctgcacgttt tacgcatcat tcaagaagaa gcgatgaagg acaacaccgg agaagtgcgc
    12001 gcccaagtgc ccgtcgatgt cgccaccttc ctgctgaacg aaaaacgcgc cgagctgttt
    12061 gcgatggaag agcgtttgga tgtcaacgtc gtcctgattc cgaacatcca cctcgaaaat
    12121 ccgcactacg aaatcaaccg catccgcacc gacgacgtag aagaagacgg cgaaccgagc
    12181 tacaaacgcg tcgccgagcc tgaagaagac gaatccgcca aaccgttcgg cggcgaaaaa
    12241 gccaaagccg cccgtcccga acccgccgtc aaaggcgtgc gccacaccag ccccgccccg
    12301 actgccgccc ccgagaaaaa aacctcttgg tgggacagct tcaaagcttg gctcaaacgc
    12361 attttcggcg gcagcgaaac ccaagccgcg cccgctgccg aaacctccga aaaacgcagc
    12421 acggcaaacc gcagcggcag ccgcgccaac aaccgccgcc aaaacccgcg ccgcagcaaa
    12481 cgcgaaggca gcaaagtaga agtccgcgaa gtggcaggca aaactgccgg acaggaagcg
    12541 cgtgccgaca aagccgaaac gcgcaacaac ggcaaccgcc gccgcaacga acgcggcgac
    12601 cgtgccgccg gacgcgccga cgaagcggaa atccaagacc gcaacataca gcctgccgca
    12661 accgttgcag atgccgcacc gtccgaaacc gaagtgcaaa ccggaaaacg ccgccgcaac
    12721 ggcagccgca gcgaacgcgg ccaaaccgcg ccggaaaccg ccaccgttgc cgaaacaacc
    12781 gttcagacag cggaaaacac gccgtccgaa ccgcataccg cagaagacaa aggcagcaag
    12841 cccaaatccg aacgcaaccg ccgcgaacgc gacagccgag atgccaaaga acgccgcgag
    12901 cgcaacaatc agcgcgaccg ccgtcaaaac ggcaaaaaac gcaatattcc gtctgccgcc
    12961 aaaatcgagc agtacctgaa tattcacgac accgccgaca aagtccgttc cgccgccgcg
    13021 cacgttttcg gcgaaaccga cgcaaacgcg ccgattaccg tcagcattgc cgatccggtt
    13081 gcagaaaggg atcttccgac agcatctccc gccgtttcaa acggcgacgc accggtttat
    13141 gatgcggcgg aaaaaatccg ccgtgccacc gccgccatcc tgcccgaagg cgcgacaccg
    13201 aaagccgaag cacaggaaat gccgtctgaa aacgcaacct ttacggctgc ggcggaacag
    13261 gcacgggaaa ccgcacaaac cggcggactc gtcctgatcg aaaccgaccc tgccgcattg
    13321 aaggcatggg cggcacaacc cgaagtccaa accggacgcg gtttgcgccg ttccgaacag
    13381 cccaagccgt ctgaagtcgc aaccgtccct gccgaagaaa tgatccaagt cgaaacccgg
    13441 caaggctgaa ccgacggcgg caaaaagagg ttctgttccg cagaacctct tttttacata
    13501 gattcggata cctgcaatgc cgtctgaaac ttcgccattc ccgtcattcc cgcaaccttt
    13561 cgtcattccc atgattcccg caacattccg tcattcccgt gaaaacggga atctagaacc
    13621 tcaaactttc ggataatctt tgaatattgc cgtcgcccaa aggcctggat tcccgcctgc
    13681 gcgggaatga cggtttagaa gttgcccgaa atctcaaaaa aaaccgaaac cgaacaagcc
    13741 agattcccgc aacattccgt cattcccgtg aaaacgggaa tctagaacct caaactttca
    13801 gataaccttt gaatattgcc gctgtccaat ggtctggatt cccgcctgcg cgggaatgac
    13861 ggtttagaag ttgcccgaaa cctcaaaaaa accgaaaccg aacaagccgg attcccgcaa
    13921 cattccgtca ttcccgtgaa aacgggaatc tagaacctct aaactttcag ataatctttg
    13981 aatattgccg ctgcccgaag gtctggattc ccacaacctt tcgtcattcc cgtgaaaacg
    14041 ggaatctaga acctcaaact ttc
//
LOCUS       DAWEYF010000036        13820 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.036, whole genome shotgun sequence.
ACCESSION   DAWEYF010000036 DAWEYF010000000
VERSION     DAWEYF010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13820
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.036"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(106..1431)
                     /locus_tag="WGN93_000786"
     CDS             complement(106..1431)
                     /locus_tag="WGN93_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ0226715.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1646..2485
                     /locus_tag="WGN93_000787"
     CDS             1646..2485
                     /locus_tag="WGN93_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ0226716.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGIGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIVVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVMTWFLCGSRPSETLTRKE
                     ELK"
     gene            2482..3648
                     /locus_tag="WGN93_000788"
     CDS             2482..3648
                     /locus_tag="WGN93_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ0226717.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3912..5177
                     /gene="efeB"
                     /locus_tag="WGN93_000789"
     CDS             3912..5177
                     /gene="efeB"
                     /locus_tag="WGN93_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ0226718.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPVHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5246..5578)
                     /locus_tag="WGN93_000790"
     CDS             complement(5246..5578)
                     /locus_tag="WGN93_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ0226719.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAAAEAAEEV
                     RDANGAVLQNGDTIILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIACKIDGSAMNL
                     KSEFVKKA"
     gene            complement(5653..7023)
                     /gene="glmU"
                     /locus_tag="WGN93_000791"
     CDS             complement(5653..7023)
                     /gene="glmU"
                     /locus_tag="WGN93_000791"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ0226720.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHCIGGKPMVERVIDTAA
                     ALNPQNICVVIGHGKEQVLNTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDASAA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7078..7350)
                     /locus_tag="WGN93_000792"
     CDS             complement(7078..7350)
                     /locus_tag="WGN93_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ0226721.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPDQTDGSEQDVRGQNWQKPKFQNR"
     gene            complement(7343..8056)
                     /locus_tag="WGN93_000793"
     CDS             complement(7343..8056)
                     /locus_tag="WGN93_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ0226722.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDEVLTRLHGMPKTQNTLSR
                     LKGRKAVFSNGPSFYVRAIVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTTPENTKECYA"
     gene            8115..9116
                     /locus_tag="WGN93_000794"
     CDS             8115..9116
                     /locus_tag="WGN93_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0226723.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9210..10058
                     /locus_tag="WGN93_000795"
     CDS             9210..10058
                     /locus_tag="WGN93_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ0226724.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10084..10569
                     /locus_tag="WGN93_000796"
     CDS             10084..10569
                     /locus_tag="WGN93_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ0226725.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLASVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10671..12239)
                     /gene="msrAB"
                     /locus_tag="WGN93_000797"
     CDS             complement(10671..12239)
                     /gene="msrAB"
                     /locus_tag="WGN93_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ0226726.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSFNMRRIEVRSHAADSHLGHVFPDGPQDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12384..13649
                     /gene="ftsY"
                     /locus_tag="WGN93_000798"
     CDS             12384..13649
                     /gene="ftsY"
                     /locus_tag="WGN93_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ0226727.1"
                     /translation="MFSFFRRKKKQETPALEEAQIQETAAKAESETDQVIENIKEDAE
                     SLAESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAIAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGESIDDLRPFDARAFVDALLD"
BASE COUNT         2974 a         3544 c         4136 g         3166 t
ORIGIN      
        1 ttccgtcaaa taagaaagga attttgtgcc tgcggtatcg caaaacttcg ccttaatgcg
       61 cccgattgac tagggatggg cttcagatgg cattgttttg ccggtttacg ggcggtattc
      121 gggcttcata ccgttgggta ggagctgcca gacgtaaccc gtggttttct gtttgccggc
      181 aagttcgccg gcttcgtcgc cgtatcccca aaaataatcc acgcgcaccg cgcctttaat
      241 cgcgctgccg gtatcctgcg ccataatcag gcggttgagg gctttgcggg taaccggatg
      301 ggcggtggcg acaaataagg gcgcgcccaa ggtaatgtag tgccggtcga ctgcgccggc
      361 atattccccc atcaacggcg tgcccagtgc gccgacggga ccgtcattgc tgcttccggc
      421 aagctcgcgg aaaaagatat agctggggtt ttgacccaaa acttcggcga ggcgttgcgg
      481 attttgccgc atataggctt tgatgccctg catggaggtc tgcccgagct tgaggtagcc
      541 tttgtccgcc atatagcgtc cgatggaaac gtagggatgt tcgtttttgt cggcatagcc
      601 gatgcggatg tatttgccgg acggggtttt cagacggccc gagccttgga tgtgcataaa
      661 aaaaagttcg acagggtctt cggcgtaacc gagtatcggt gctttgccgt caagcgcgcc
      721 gccgttgatt tggttgcgcg tgtggtaggg gaggaagcgg cttccttcaa acctgccttt
      781 gattgccgtt gtgcgcgcag tgatggggaa ttgggagagg tcggcggtat gtgtgccgcc
      841 ggtattgtcg attgtgccgc tgttttttcc cgtctgcctg atgcggacaa gggcttttcc
      901 gctccgcaaa ccggcaggca gggggacgga gataaaatcg tcgggaatac cgtaaatcgg
      961 gaagcgggct tgtgccgtcc gcctgtcgtc gcccttcagc accggctcgt aatagccggt
     1021 aaccgtaccg gcaaggcttc cgttgcctgc aacctgccac ggcgtgaaat agcgttcaaa
     1081 aaactgtttt gcctgaaagg aatggacggg ggtttgaaag gcttgggcgc acacatcctg
     1141 ccagccttgg cggtttttca aattggcgca gccgaggcgg aaggattgca ggcttttggc
     1201 gaaatcctgc gccgcccagt ggggcaggga caggtgcggc acaacggtat aaacggcccc
     1261 gccgccgccg accgtcgttc cggcggggtc ggggatgccg accggccggt ccgggccgtt
     1321 gatgacggat gtgtcgggtt gcggaaaggt ttggatgctc ttgctttggc aggcggcgag
     1381 gatggcggcg gcgatgccgc acagggcggc gcggaacagg tattttttca taatggacaa
     1441 tgttgccggc agtaataaaa aaaaaagatg gtttcgggcg gcgttgcggc agccgtggag
     1501 aggggatttt aacacagggc gcagctgcag cctgcggaac tttccgccgc gcggcaatgc
     1561 agataaaaat aacttgcatt tgtatttaca agcaatgaaa atattccgat aatatattat
     1621 tcatcatcct tgttcgttcg cgtttatgct ggtcgctttt ttaattatgt tgcgcgaggg
     1681 tatcgaagcc gcgctcatcg tcggcatcgt tgccggtttt ctgaaacagt ccggacattc
     1741 caaactgatg cctaaggtct ggttcggggt cgtccttgct tctttgatgt gtttgggcat
     1801 cggatacggc atccattcgg caacgggcga gattccccag aagcagcagg agttcgtcgt
     1861 cggcattatc ggtttggttg ctgtcgcgat gctgacttat atgattttat ggatgaaaaa
     1921 ggcggcgcgt tcgatgaagc ggcagcttca ggattctgta caggcggctt tgaaccgtgg
     1981 cagcggtcaa ggatgggcct tggtcggtat ggcgtttctt gccgtggcgc gcgaaggttt
     2041 ggagagcgtt tttttcctgc ttgccgtatt caaacagagc ccgacgtggc agatgccggc
     2101 cggtgcggta gcgggggttt tggctgccgc cgtgattggc gcgttgattt atcagggtgg
     2161 gatgcgcctg aatctggcta agtttttccg ttggacgggg gcgtttttga ttgtcgttgc
     2221 cgccggcctg cttgccggct cgctgcgcgc gctgcacgaa gcaggcattt ggaacgcgct
     2281 tcaggacatt gtgttcgact catcaaaata tttgcacgaa gacagtccgt taggtgtgct
     2341 gctcggcgga tttttcggct ataccgacca tccgacgcag ggcgaggcct tggtttggct
     2401 gctgtacctt attcccgtca tgacttggtt tttgtgcggc agcaggccgt ctgaaacttt
     2461 aacccgtaaa gaggagctga aatgagaaaa ttcaatttga ccgcattgtc cgtgatgctt
     2521 gccttaggtt tgaccgcgtg ccagccgccg gaggcggaga aagctgcgcc ggcagcgtcc
     2581 ggtgaggcgc aaaccgccaa cgagggcggt tcggtcagta tcgccgtcaa cgacaatgcc
     2641 tgcgaaccga tggaactgac cgtgccgagc ggacaggttg tgttcaatat taaaaacaac
     2701 agcggccgca agctcgaatg ggaaatcctg aaaggcgtga tggtggtgga cgagcgcgaa
     2761 aacatcgccc ccggactttc cgataaaatg accgtcaccc tgttgccggg cgaatacgaa
     2821 atgacttgcg gtcttttgac caatccgcgc ggcaagctgg tggtaaccga cagcggcttt
     2881 aaagacaccg ccaacgaagc ggatttggaa aaactgtccc aaccgctcgc cgactataaa
     2941 gcctacgttc aaggcgaggt taaagagctg gtggcgaaaa ccaaaacctt taccgaagcc
     3001 gtcaaagcag gcgacattga aaaggcgaaa tccctgtttg ccgacacccg cgtccattac
     3061 gaacgcatcg aaccgattgc cgagcttttc agcgaactcg accccgtcat cgatgcgcgt
     3121 gaagacgact tcaaagacgg cgcgaaagat gccggattta ccggctttca ccgtatcgaa
     3181 tacgcccttt gggtggaaaa agacgtgtcc ggcgtgaagg aaattgcagc gaaactgatg
     3241 accgatgtcg aagccctgca aaaagaaatc gacgcattgg cgtttcctcc gggcaaggtg
     3301 gtcggcggcg catccgaact gattgaagaa gtggcgggca gtaaaatcag cggcgaagaa
     3361 gaccggtaca gccacaccga tttgagcgat ttccaagcca atgtggacgg ttcgaaaaaa
     3421 atcgtcgatt tgttccgtcc gctgatcgag gctaaaaaca aagccttgtt ggaaaaaacc
     3481 gataccaact tcaaacaggt caacgaaatt ctggcgaaat accggactaa agacggtttt
     3541 gaaacctacg acaagctggg cgaagccgac cgcaaagcgt tacaggcctc tattaacgcg
     3601 cttgccgaag accttgccca acttcgcggc atactcggct tgaaataagc cgcaagcgtt
     3661 cagacggtat ttggcggcag ataccgtctg aagttttata gtggattaac aaaaaccagt
     3721 acggcattgc ctcgccttgc cttgccgtac tatttatact gtctgcggct tcgtcgcctt
     3781 gtcctgattt ttgttaatcc actatatccg ccatatattg cagggcagga tttcaacctg
     3841 ccgctatcgg ttaatggaaa aacggcgtgc agggataccc atcctgctgc acggatattg
     3901 aaggaaacac catgagcaaa aaccaacccg cacaaccgac caggcgcact ctttttaaaa
     3961 ccgcgatcgc agccggagca gtcggcgcaa tcggaggtta tctcggcggc aaaaaacagg
     4021 gcgaaaccgc cgaacgcacc gccgaaagcc aacactcgcc ccaagcctat ccctgctacg
     4081 gcgaacatca ggcaggcatc gttacgccgc agcaggcgtt ttcgattatg tgcgccttcg
     4141 acgtaaccgc gcaaagtgcc aagcagctgg aaaacctgtt ccgcacgctg accgcccgca
     4201 tcgagtttct cacccaaggc ggcgaatacc aagacggcga cgacaaactt ccacccgccg
     4261 gcagcggcat tttgggcaaa gccttcaacc ccgacgggtt gaccgttacc gtgggggtgg
     4321 gcagcagcct gtttgacggc cggttcggac tcaaagacaa aaaaccggtt catttgcagg
     4381 aaatgcgcga cttctccaac gataagctgc aaaaaagctg gtgcgacggc gatttgagcc
     4441 tgcaaatctg cgccttcacc cccgaaacct gccaagccgc cctgcgcgac atcatcaaac
     4501 acaccgtcca aaccgccgtt atccgttgga gtatcgacgg gtggcagcct aaatccgaac
     4561 ccggcgcgat ggcggcgcgc aacctgttgg gcttcaggga cggcacgggc aaccccaaag
     4621 tttccgaccc caaaactgcc gacgaggttt tgtggacggg tgtggccgcc aacagcctcg
     4681 acgaaccgga gtgggcgaaa aacggcagct atcaggcagt ccgccttatc cgccactttg
     4741 tcgagttttg ggacaggacg ccgcttcaag agcaaaccga cattttcggg cggcgcaaat
     4801 acagcggtgc gccgatggac ggcaaaaaag aagccgacca accggatttt gccaaagacc
     4861 ccgaggggaa taccacgccc aaagacagcc atatacgcct ggcgaatccg cgcgatcccg
     4921 aattcctcaa aaaacaccgc ctcttccgcc gcgcctacag ctattcgcgc ggactcgcct
     4981 caagcggaca gcttgatgtc gggctggtgt tcgtctgcta tcaggcaaac cttgccgacg
     5041 gattcatctt cgtgcaaaac ctcctcaacg gcgaaccgct ggaagaatac atcagcccct
     5101 tcggcggcgg ctatttcttc gtgctgcccg gcgtggaaaa aggcggcttt ttggggcaag
     5161 ggctgctggg cgtataaatc cgccatataa aaaacgccgt ctgaatccga taaggggttc
     5221 agacggcatt ttactgtttg ggcggtcagg cttttttgac gaattcagat tttaaattca
     5281 tcgcgctgcc gtcgattttg caggcgatgt tgtgatcgcc ttcctgcagg cgtatgcctt
     5341 tgactttcgt accttgtttg atcgtcatcg agctgccttt taccttgagg tctttgatga
     5401 ggatgatggt gtcgccgttt tgcagcaccg cgccgttggc atcgcgcact tcttcggcgg
     5461 cttcggctgc ggcggattcg gttttattcc attcgtgggc gcattcgggg cagatgtatt
     5521 gtccgccgtc ttcgtaggtg tattcggagg cgcattgcgg gcaagggggt aatgacatgg
     5581 tttgccgtcc ttatcggatg tttgttttgg ggtgccgtct gaaacctgaa accggcttca
     5641 gacggcatag ctttattgtt tgtctttttc aggacgcacc cagccttcga tgacggtttg
     5701 gcgggcgcgg gcgagggcga gtttgttgtc ttcgacattg cgggtaatcg tgctgcccgc
     5761 gcctgtggtt actttgttgc cgagggtaac gggggcgact aggacgcagt ttgaaccgat
     5821 gcgcacttcg tcgccgatga cggttttgtg tttgtgcacg ccgtcgtagt tggcaataat
     5881 cgtaccggcg ccgaagttgg ttttgctgcc gacttcggca tcgccgatgt aggtaaggtg
     5941 gttggctttg gtgcctttgc cgatggcggc gtttttgatt tcgacgaagt tgccgacgtg
     6001 tacgtcgtct gcaaggcggg cttgcggacg caggcgggcg tacgggccga ttcggttgtt
     6061 ttcgccgact tcgcagtctt cgaggtggga gaagggggcg attttgctgt ttgcaccgat
     6121 tttggcgttt ttgatgacgc agtttgcgcc gatttcgacg ttgtcgccga tttcgacttc
     6181 gccttcaaag atacagttca catcaattac gacatcctgt ccgtgtttca gacggcctcg
     6241 taaatcgaaa cgtgccgggt cgtgcagggt aacgcctgct ttgagcaatt cttgcgcctg
     6301 tccggtttgg aagatgcgtt cgagttcggc gagctggcgt ttgttgttca cgccggcggc
     6361 gaggtgggag gcgcggactt ggacgggatg aactttaata ccgtcggcaa cggctttggc
     6421 gatgaggtcg gtcaggtagt attcgccttg ggcattgttg ctggaaaggc tgttcagcca
     6481 gttttccagt ttggcgttgg gcaggacgag aatgcctgtg ttggtttctt tcacggcttt
     6541 ttgggcggca cttgcgtctt tttcttcgac aatggcggtt acgctgccgc tgccgtcgcg
     6601 gatgatgcgc cccaaacctg acgggtcggc gggcacgtcg gtcaacagcc cgacttcgtt
     6661 gcctgcggct tcgagcaggg tttcgagggt ttcaacgtca attaaaggaa cgtcgccgta
     6721 caacaccagc gtgcggcctt cggcggcaag gtggggcagg gcggttttga cggcgtggcc
     6781 ggtgccgagc tgttcggttt gttcaaccca aacgacatcg cgtttgacag tattcaaaac
     6841 ttgctctttg ccgtgtccga tgacgacgca gatgttttgc ggattcagtg cggcggcggt
     6901 gtcgataacg cgctcaacca tgggcttgcc gccgatgcag tgcagcactt tgggcatttt
     6961 ggaatacatg cgcgtgcctt tgccggcggc gaggataacg atgtttaaag tgttttgcgg
     7021 catgacggtt tcctgtgcaa tgccgtctga aagggcttca gacggcatag ggtgggttta
     7081 tcggttttga aatttgggct tttgccagtt ctgtccgcgt acgtcttgtt cggaaccgtc
     7141 ggtttggtcg ggcagcacgg catggcgttc ggggcggtat tggttgtagt tcatattttt
     7201 cgagtagctg ccgtcttggt aataaacggg cgtgccggcg ggatattttt gacggacggc
     7261 ggtcttgccg ttgccgtctt gataagtttc ccacgcgcag cccgacaaaa gagcggcggc
     7321 agtcatcagg ataaggaagg ttttacgcat aacattcttt cgtattttcg ggggttgtgc
     7381 gagtattgta atgattttgg cggtgttctg acaaagtttc tgcataccga gccagttgcg
     7441 ccatatcgct tacggaagca tcgataaagg gcaggtcgtg cacttttgcg ccgaaccgga
     7501 cggttttcat gcccaatgct tttgcctgat gcaggttgtc cgcgctgtcg tccaccataa
     7561 tgcagcattc gggcggtacg tccaaaaggc ggcagacatt gagatacgct tgcggattgg
     7621 gtttgtacag cagtccgaaa tcatctgtgc cgaacagtgc gtcgaaacgg ttttccaaac
     7681 cgagtgcgcc gacaatggcg cggacgtaaa acgacgggcc gttggaaaaa accgccttgc
     7741 gcccttttag gcggctcagg gtgttttgtg ttttcggcat accgtgcaga cgggtcaaaa
     7801 cctcgtcaat cggatggctt tcgcgcaaaa attcggcgat gtcgatttcg ggatggtgga
     7861 tttgcagtcc ggcgagcgtt gcgccgtagc ggtgccaata gtcttgacgc aggtcggacg
     7921 cggcggattc ggagagtttg aggcggcgtg ccatatagcg tgtcatggcg cggttgatga
     7981 gtgtgaagat gccggcatcg gcattgtgca gcgtgttgtc gaggtcgaac agccacacgg
     8041 tcgggttttc ttgcattttg aaccgtgaaa atttgttaga atgttatttt acagcgaata
     8101 gaggaggact cggaatgaaa cggaaaattt ggctgctgcc gctgctggcg gtttcggcat
     8161 acctgcaggc gcagacggaa gtcaggctgg cggtgcataa gtcgttcagc ctgcccaaag
     8221 ggctgattgc gcgcttcgag cgggcaaacg atgcgaaggt gtcgattatt caggcgggcg
     8281 gcgcgaacga aatgctcaac aaactgattt tgagccgcgc caacccgatt gccgacgcgg
     8341 tgtatggttt ggacaacgcc aatatcggca aggcgcggga aatgggcatt ttggcggcgg
     8401 cgcaacccga atccgccccc gtcgcggtcg ggctgccttc ggctttggcg gtcgattacg
     8461 gctatgtgtc catcaattac gacaaaaaat ggtttgaagg caaaaagctg cccctgccgc
     8521 aaaccctgca ggatttgacc cgccccgaat ataaaaacct attggtcgtg ccgtcccccg
     8581 ccacgtcgtc cccggggctg ggcttcctga tggcgaacat cagcgggatg ggcgaagaag
     8641 gcgcgttcaa atggtgggca cagatgcggc agaacggcgt gaaggtcgcc aaaggctgga
     8701 gcgaggcgta ttacaccgac ttttcgcaca acggcggcgc gtatccgctg gtggtcggtt
     8761 atgccgccag tccggcggcg gaagtgtatt tttccaaagg caaatacagc gagccgccga
     8821 cgggcaacct gtttttaaaa ggcggcgtat tccgccaggt cgaaggcgcg gcagtcttga
     8881 agggcgcgaa acagccgaag ctggcggcaa aactggtgca atggctgcaa agtcgggaag
     8941 tgcagcaggc ggttccgtcc gaaatgtggg tttaccccgc cgtcaaaaac acgcgcctgc
     9001 ccgacgtgtt ccgcttcgcc caagccccga cgcacaccac cgcccccgcg cagcgcgata
     9061 ttgatgcgaa ccagcgcgga tgggtttccc gttggattag aacggttttg aaataaaaca
     9121 aacataccgc cccgcagggc ttcatacggc atttttacac ctgtgccgat tacgccgcac
     9181 ggggcggatg ttcgatcaag aggaaaacaa tggacttcaa acaatttgat tttttacacc
     9241 tgatcagtgt ttccggttgg gagcatctgg ctgaaaaggc gtgggcgttc gggctgaacc
     9301 ttgccgccgc gctgcttatt tttttggtcg gaaaatgggc ggcgaaacgc attgtcgctg
     9361 tgatgagggc ggcgatgacg cgcgcgcagg tcgatgccac gctgattagt tttttgtgta
     9421 atgttgccaa tatcggctta ttgattttgg tgattattgc cgcattgggc agattgggcg
     9481 tttccacaac atccgtaacc gccttaatcg gcggcgcggg tttggcggtg gcgttgtcct
     9541 tgaaagacca gctgtccaat tttgccgccg gtgcgctgat tatcctgttc cgcccgttca
     9601 aagtcggcga ttttatccgc gtcggcggtt ttgaaggata tgtccgagag attaaaatgg
     9661 tgcagacttc tttgcggacg accgacaacg aagaagtcgt gctgcccaac agcgtggtga
     9721 tgggcaacag catcgtcaac cgttccaccc tgccgctttg ccgcgcccaa gtgatagtcg
     9781 gcgtcgatta caactgcgat ttgaaagtgg cgaaagaggc ggtgttgaaa gccgccgtcg
     9841 aacacccctt gagcgttcaa aacgaagagc ggcaggccgc cgcctacatc accgccttgg
     9901 gcgacaatgc catcgaaatc acattatggg cttgggcaaa cgaagcagac cgctggacgc
     9961 tgcaatgcga cttgaacgaa caagtggtcg aaaacctccg caaagtcaat atcaacatcc
    10021 cgttcccgca acgcgacata cacatcatca attcttaaac gccgtctgaa aggggagtgg
    10081 gaaatggacg cgctgcacac catcgcccga aacctgacga aaaaacgtca aaccgtaagc
    10141 tgtgccgaat cctgcacggg tgggctgctt gcctccgtat tcacaagcgt tgcaggcagt
    10201 tcgcaatggt tcgatcaaag ttttgtaaca tacagcaaca aagccaaaga agaccgcttg
    10261 ggcgtgttgc ccgaaaccct gctcgaacac ggcgcggtca gccgccaaac cgtctatgag
    10321 atggcgcgcg gcgcgaaagc cgtggcgcag gcggattacg ccgtcggtat ttccggcatc
    10381 gccggtccgg gcggcggcag cgaaagcaaa cccgtcggca cggtttggtt cgggtttgcc
    10441 tttccgggcg gaagttgcga agcaatgcgc cgttttgacg gcaaccgcga atccgtccgc
    10501 gcgcaggcgg tcgccttcgc gttggaacgg ttggcggggc tgattgaaaa cggcggcgat
    10561 gccgtctaaa caaaatctcc gtctggacaa aatccccgcc ggataaaaaa taccgtctga
    10621 aacgttgcag gtttcagacg gtattttgtc gggttaggcg gcggtgcggc ttatttcact
    10681 ttactcttca acgcgccgta gcctgccgcg tccatttgtt ccagcgggat gaatttcaaa
    10741 ctcgcgccgt tgatgcagta gcgcagaccg cctttgtctt gagggccgtc ggggaagacg
    10801 tgtcccaagt gcgaatcggc ggcgtggctt ctgacttcga tgcggcgcat attgaagctg
    10861 aaatcatcgt gttcggtaac ggattttgca tcaatcgggc gcgtgaagct cggccagccg
    10921 cagccggaat catatttgtc ggcggagctg aacaaaggtt cgccgctgac aacgtccaca
    10981 taaatgccgg gtttgaacaa atggtcgtat tcgtggctga aggcatattc ggtcgcgctg
    11041 ttttgggtaa cttggtattg ctcttcggtc agggtgcgtt tgagttcggc gtcactcggt
    11101 tttttatacg ttgccgcatc gaagcctttg ccttgcgggg cggctttggt tttgcccggc
    11161 agcggttcgt cggctttgcg gatatcgatg tggcagtagc cgttggggtt tttaatcagg
    11221 tagtcctgat ggtattcctc ggcatcgtag aagtttttca gcggctcgtt ttcaacaacg
    11281 aggggcagtt ggtatttttg ctgctcgcgt ttgagggcgg cggcgatgac ggctttttcg
    11341 gcggggtcgg tgtagtacac gccgctgcgg tattgcgtac cggtgtcgtt gccctgtttg
    11401 ttgaggctgg tcggatcaac gacgcggaag aaatattgca ggatgtcgtc taggctgagt
    11461 ttgtcggcat cgtaggtcac tttaacggtt tcggcgtggc ccgtatggcg gtaggacacg
    11521 tcttcatagc tcggattttt cgtgttgccg ttggcgtagc cggataccgc gtcaaccacg
    11581 ccgtcgatgc gttggaaata ggcttccaag ccccagaagc agccgccggc gaggtaaatg
    11641 gtgcgcgtgt tcatgatttt tgaatccttt ttctgagtgt cgggtttgta gaacgaatgt
    11701 ttcaagctgc ccaaatcggc attcgggtcg cggattaacg ccaacgcctg cgcttcgttg
    11761 atgctgcctt tgacgatgcg ctgcacgtcg ccgtctttac cgattaacgc ccacgaaggg
    11821 taaacgctga tattcaggct ttgggcgatc gtgccgccgt tgtcggttac gacgggcagc
    11881 ttgggataat tcaaaccggc ataccatttt tggaagtcgc cgtctttttt ctcgtgcaaa
    11941 aagcccggag acgcgacggt aatcaggttg gcggagctga attttgcatc ttgcgcccat
    12001 ttttcggtct gtcccaattc ggacagacac aaaggacacc agctcgccca aaatttaatc
    12061 agcgtcggtt tgtctttttt caagtaaaca ctggcggggc ggttgtccgc agttttcaaa
    12121 gtggataaag tgtgcggcac ggtcgcggct ccggcatcga cgattttggg cgaacaagca
    12181 cccagcgcaa gcaggcagcc gaacttggcg caaagggaaa agaaagtacg gtgtttcatt
    12241 ttgagtttcc tgtgtggacg gtttgcatga ttagacgttt gagatgccga aaccttacag
    12301 ctcggatttt cagacaacct tgccgcgtaa aatacgctac aatacgccct gtttcaagtt
    12361 tctaaaatta aaaggaaaat tcaatgttca gcttcttccg tcgcaagaaa aaacaggaaa
    12421 cgccggctct cgaggaggct caaattcagg aaaccgcagc aaaagcagag tccgaaaccg
    12481 atcaagtaat tgaaaatatt aaagaagatg ctgaatcttt agcagaaagc gtcaaagggc
    12541 aggtcgaatc tgccgttgaa accgtcagcg gtgcggttga acaggtaaag gaaaccgttg
    12601 ccgagatgct gtctgaagca gaggaagcgg cggaaaaagc agcggaacaa gtcgaagcgg
    12661 caaaagaagc cattgccgaa accgtcggcg aggctgtcgg gcaagttcaa gaagccgttg
    12721 caacaactga agaacacaag ctcggttggg cggcgcgttt gaaacaaggt ttgaccaaat
    12781 cgcgcgacaa aatggcgaaa tcgctggcgg gcgtgttcgg cggcggacaa atcgacgaag
    12841 atttgtacga agagctggaa accgtgctga ttaccagcga catgggcatg gaagccaccg
    12901 aatacctgat gaaagacgtg cgcgaccgtg tcagcctcaa agggctgaaa gacggcaacg
    12961 aattgcgcgg cgcgttgaaa gaagccttgt acgacctgat taagcctctg gagaaacctt
    13021 tggttttgcc cgaaaccaaa gagccgtttg tcatcatgct tgccggcatc aacggcgcgg
    13081 gcaaaaccac gtctatcggc aaactcgcca aatatttcca agcgcagggc aaatctgtgc
    13141 tgcttgccgc cggcgatact ttccgcgccg ccgcccgtga gcagcttcaa gcttggggcg
    13201 aacgcaacaa cgtaaccgtg atttcgcaaa ccacgggcga ttccgccgcc gtgtgcttcg
    13261 atgccgtcca agccgccaaa gcgcgcggca tcgacattgt gctggccgac accgccggcc
    13321 gcctgcccac gcagcttcat ttgatggaag aaatcaaaaa agtgaaacgt gtgctgcaaa
    13381 aagccatgcc cgacgcgccg cacgaaatca tcgtcgtgct tgatgccaac atcgggcaaa
    13441 acgccgtcaa ccaagtcaaa gcctttgacg acgcattagg gctgaccggt ttaatcgtga
    13501 ccaaactcga cggcacggca aaaggcggca tcctcgccgc gcttgcttcc gaccgccccg
    13561 tccccgtccg ctacatcggc gtgggcgaaa gcatagacga cctgcgcccg tttgacgcgc
    13621 gcgcgtttgt ggacgcactg ctggattgag ccgaaatgcc gtccgaaaac agcagaccga
    13681 tgccgtcatt cccgcgcagg cgggaatcta gaccttggga taacagcaat attcaaaggt
    13741 tataaaagac ccgtcattcc cgcgcaggcg ggaatctaga acgtaaaatc taaagaaacc
    13801 gtgttgtaac ggcagaccga
//
LOCUS       DAWEYF010000037        13755 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.037, whole genome shotgun sequence.
ACCESSION   DAWEYF010000037 DAWEYF010000000
VERSION     DAWEYF010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.037"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(4..462)
                     /locus_tag="WGN93_000799"
     CDS             complement(4..462)
                     /locus_tag="WGN93_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226728.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(1027..1230)
                     /locus_tag="WGN93_000800"
     CDS             complement(1027..1230)
                     /locus_tag="WGN93_000800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226729.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
     gene            complement(1794..2729)
                     /locus_tag="WGN93_000801"
     CDS             complement(1794..2729)
                     /locus_tag="WGN93_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ0226730.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCLDSIDYVDERKGVP
                     LAAMQHIFMDVRAAASHAYLFEHDLKKFKQYAYVAGKLGVLLSVNSTDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFINRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPAAEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            complement(2732..4870)
                     /locus_tag="WGN93_000802"
                     /pseudo
     CDS             complement(2732..4870)
                     /locus_tag="WGN93_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242970.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
     gene            complement(4977..5240)
                     /locus_tag="WGN93_000803"
     CDS             complement(4977..5240)
                     /locus_tag="WGN93_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226731.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(5259..6689)
                     /locus_tag="WGN93_000804"
                     /pseudo
     CDS             complement(5259..6689)
                     /locus_tag="WGN93_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
     gene            complement(6888..7262)
                     /locus_tag="WGN93_000805"
     CDS             complement(6888..7262)
                     /locus_tag="WGN93_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226732.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            complement(7540..7917)
                     /locus_tag="WGN93_000806"
     CDS             complement(7540..7917)
                     /locus_tag="WGN93_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226733.1"
                     /translation="METLNDIKKILINVGLYQGFDLTDPKVSEEVNHETANMKWIKDY
                     TSDGNWDNEFKEDLKNFLDYMEVCQLALNDKNFKIASNSLFMAMIYAGNLSLIFDSIK
                     TDISTLLSAEYKKNSFSWPSLDE"
     gene            complement(7926..>13755)
                     /locus_tag="WGN93_000807"
     CDS             complement(7926..>13755)
                     /locus_tag="WGN93_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ0226734.1"
                     /translation="KHSTMVAVAETANSQGKGKQAGSSVSVSLKTSGDLCGKLKTTLK
                     TLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQTPNGRGLSHNRY
                     TQFDVDNKGAVLNNDRNNNPFLVKGGAQLILNEVRGTASKLNGIVTVGGQKADVIIAN
                     PNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGAAGWNDKGGADYT
                     EILARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTIALDTAALGGMYA
                     DSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADGTEASPTYLSIET
                     TEKGAAGTFISNGGRIESKGLLVIETGEDISLRNGAVVQNNGSRPATTVLNAGHNLVI
                     ESKTNVNNAKGSANLSAGGRTTINDATIQAGSSVYSSTKGDTELGENTRIIAENVTVL
                     SNGSISSAAVIEAQDTAHIESGKPLSLETSTVASNIRLNNGNIKGGKQVVLMADGDIQ
                     AKASNLNASGNLYIHAGKDLDLNADKDLSTQSISLRADNTALISSNGNTLTAEKNLDI
                     QAGSLSVRQSNLQSSGGNVQMSATKGNISLNQSWINASQNIDTAALQGNIISDGLTAV
                     AEVGRVSLLANGNVDFNGLNTLIAEGDINAGSVGKGRLKMDNTDIYASAGDVKLVAGG
                     QLDLGNGTVNGGHISLDSNKGSMVVQDVHLNARASLKVDADQTLTINNSKLNSGHNTQ
                     INTNHGHMTLNQLDAHSRRHMSISAQGKGKGKDSGQILQNDQQNSKSTLAADGVLSLN
                     SSALQVLDNTTLRGGAINIKAGGGIIKRGHIDWETQDTATMRSAELKPLSGMMSIESG
                     GNNPLTVEPGNRIVSAGDLAVNHNGTFQISARAGNNGNPSAQTASVSAKGNIGIVAGE
                     VDIDAANMAAGKDLALVATKGNISLNSIRNTFSNYQLKTDKHNITQQLTDVEQELSKL
                     TSDPKYRKAQDLPQMLRRKYKRRDKVFGDSEARLRGLRAEINAADEAWAELQSPVKAL
                     LERKQLLQQALLTVSQPGSGHENQGSTLSGQNIKLLAAGGIRIQGSKVAATQQANIQA
                     AGFLPAPAAEELQEGRLQSAIDISGVFDTFEYGQQGSDKYGYAIFSRPSEISGKTGVT
                     LSAPYANENSRILLSTTDISSENGKIKIQSYGDQYYYARQSELYTFERRSYKTGKWYN
                     RKHITEVKEHKNAKPDAVNLSASQGIDIKSGGNIDAYATAFDAPKGSINIEAGRKLTL
                     YAVEELNYDKLDSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAESANLQSGWDTKL
                     QGTQFETTLGGATIRAGVGEQARADAKIILEGIKSSIHTETVSSSKSTLWQKQAGWGS
                     NIETLQLPSFTGPVAPVLTAPGGYIADIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNI
                     NWNQVQLAYDKWDYKQEGMTPAAAAVVVIVVTVLTYGALSAPAAAGTAGAAGAGAGGA
                     AAGTAAGTGVAAGTAATTGVAAGTSAAAITTAAGKAALASLASQAAVSLINNKGDINH
                     TLKELGKSSTVRQAATAAVTAGVLQGISGLNTQAAEAVSKHFHSPAAGKLTANLINST
                     AAASVHTAINGGSLKDNLGDAALGAIVSTVHGEVASKIKFNLSEDYIAHKIAHAVAGC
                     ASAVANKGKCRDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVKKITAYAKLAAGT
                     VAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKINVRDLKQTLK
                     DEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKGEAAQKVKEVLEKNRPYI
                     PNKGAVPNMSTYMKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLD
                     GQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAAKGRKLNLK"
BASE COUNT         3299 a         3266 c         2910 g         4280 t
ORIGIN      
        1 cgtttagtct agagtctgta tattacattt atttttaggg tctgctagcc aatttcttgt
       61 tcccttcatt attttatctt ctgaaagaaa attatttttt tccatgctat taatattaat
      121 gatatgattt ttatttaaaa taatttttcc atataaaatt tccggtttgt aatagcaaga
      181 gtctgaagca aatccttgcc cgtcaatata agaaaaataa atgttatcat cctccttata
      241 atattctaaa accaatccgg atattatttt atcaaaattc ccttcatttc catctttcat
      301 gactaaaata taattagcag gccaaccttt atcgtaaaca tattcaaact gatagttccc
      361 gaaactctcg atatccgaac taaaaaagaa gaaaagcaaa ttaatagcca atacaaaaac
      421 aaataagaac aaaaatagca aaattttcaa cttagttaac aatatttacc tctcctttaa
      481 attcaatcct gaaaggtacc ccttaccctg ggctaccaat tatagtttcc atatttctaa
      541 atattgtttt tacattactt ttttctcccc ccaaaggaat gcattttaaa atcatgcttt
      601 tcaggtgcta atcgatactt accattaaca tctttaatca cagatatatt tccatgtata
      661 gcccaacgtg aaaaatctga gtattatata cagttatacc ttactgaaac aaagctagct
      721 gtacatatct gtaccatatt tttactacaa acaaaaaata tttataatta ttaaggataa
      781 gataaaaacc cccaacgcca gattaattct taataatttc aaataaaaaa tatttgagat
      841 tttttctttt ccaaataata tattgaaata tttaaagtta aggtagcttg atttaattag
      901 aaaatcaaaa aaaaccatta attaattttt cttctttaaa tattttatat gatattataa
      961 aattaaataa cattgcgaaa acatatgaaa tcatcaaaat accaaatata tagtgagaat
     1021 gcattattat ttagctcctt cttttggctc tgacaaattg acagtccatt gatatccaat
     1081 gcttgcattt gcaattgctg acgcacctgc ccctgttttc cctgttagta tcaatggttc
     1141 ttttcttgca agatgtgcac ctgcacaacc acctaatact aaaccaccac ctattgtaaa
     1201 tccttcctgt tgtatctcta atgataacat tttcttcttg tgccgccctt aatacagatt
     1261 gtggaattgg attgacctga gcaggaactt ctaaaataag ttttccttca agctgtcttc
     1321 ctcttagcag attaggtgta cttggaacat tggaaatgac aaagtgagtg cgcaaagcca
     1381 tctgaaggcg atgtgtttga acctgttgaa agcggccaac aggctaaatg cgcccgctgc
     1441 cgcctaaaag gcagcccgga tgcctgatga tcgggtatcc ggggaggatt aagggggtat
     1501 ttgggtaaaa ttaggagata tttggggcga aaacagctga aaacctgtgt tggggtttcg
     1561 gatgtcgggg aagggctttt ttgcaaaggt ctcaactcat gttattgcaa agatctcatg
     1621 ccttgttttg ccagcaggtt gagttcttct ccgacaatca gcgtggtaaa gccccgccac
     1681 aacacagatc tatgtactgt ggaagggctt caatttatag ctttcgaaaa tctttcagct
     1741 ttaagacggc ctaaagttgt aatctataaa acaggagctc agagttttac ggctcactct
     1801 cgcttcgcgt taccaaatac cagcttatcg gttttgaacg tatagtaatc tatccaatcc
     1861 tgcagatatt catacgggta agacaagtca tactgtttca taaaatcgaa gatgtcttga
     1921 tattcggctg ccggcagcgg atcgtaaaca atcaaatccc tcggtgcgat ttcttgatct
     1981 atgcccaaat cgaaaccgtg catggatgcg attttggcgt aggtaacgat ttgcggctgc
     2041 aggtagaaat cgaaatagga caatgtttct tttgcagcca tacgcgcggt ttttttatcg
     2101 aaaagcggct ctaaggcggc tttcattgcc tcggcatcct gttcggcgaa agcgaggaag
     2161 aagcggtaat cgtacaaccg cttttgcagc catttgctgg gggtgggatg cgccaagact
     2221 ttctcgctac gttgtttcaa ccgatcaagc tgcttaccct ccaccatcag cagagtattg
     2281 taaatcatat gacggttgag gtcgtagcgg tttataaagg cttctgtatc gttggcgatg
     2341 ttgtcgatat tgcgcaccag aaactcgcgc agctgcgggc tgtcgctcat cagcatcaga
     2401 aacatcggat cttgaatgtt gagcatgtcg cagggaaaga agaagggttc ggggtctgta
     2461 gaatttacac tcagcaaaac tcccagcttt cctgcaacat aagcatattg cttgaatttc
     2521 ttaagatcat gttcaaatag ataggcatgg gaagctgcag ctctaacgtc catgaaaata
     2581 tgttgcatag ctgcaagcgg aacgcctttt ctttcatcta cataatctat agagtcaagg
     2641 caaccgctat tgaaattagc agtattgcct atgattacat tagtaatatg ctcataccat
     2701 ttttgggtgg tcatcatatt gtgccccatt gttatctcct tatattggct ttagaaggaa
     2761 ctttgacagg aagaataacg gccttacctg tttgacgatc aacgcctgct attgctgttt
     2821 ttaatgtgcc gttcttattt gctttgaaga cagcagcttt agcgggacta ccatcgggta
     2881 attgatctaa aacttgtcta atccaatcct cactcatttg cgtatatcca cccgcaccat
     2941 tcggattcag ctgtaccgta ccgttcctaa tctgcttact ttctacaatc aaaacgacac
     3001 taccatcggc agcctgccat acatgatcaa aaccgttatt tccgccgtat ttgccgcccg
     3061 aaagcactct gaagccattt tgtttagcta aagagtcaaa taactgctcg gtcattttac
     3121 ctgtcgtgtc ccttccttcg ccaatagctt tcagcaattg tttgtcagtt gctgcagtaa
     3181 cccttaattc agtttgaccg attttgattt tggttttact gacatagccc tgtgcagtgg
     3241 caacggttgc tgccttgtcc aaggcttttt tcatgccttg taaatttttt gccgctttcg
     3301 ctactttata ggcctgtatc gattcaccga tacccggaac cacacccagc aaagcaaaca
     3361 ggtgatcggc agcggtctgt gcttgtacaa aactctgtat atcaccgata attggaataa
     3421 atcctgtctg aagaagcaaa acttctcgat attcttcagg attttcacgt atccattttt
     3481 gttgttcctt ttgaaattca tcacactttg caccaacgca tctaggatac aaagtattat
     3541 tctccaccgc tatctgtgcc gcattcgccg ctgtattcac atccccgcct acaacggcag
     3601 acgcagtgcc ggcaaccagt tttgaatagg cagtaatctt cgctttagat ttttcgattt
     3661 cggtcgcact catacgactg aaatcagtat tcttaaccaa agcctcacca acaatctcac
     3721 cgactgcagc gcctatcgcg ccatcctgac acttgccctt attcgccgcc gctgccgcac
     3781 agcccgctat ggcatgggca atcttgtgga ctatgtagtg ctgatccaat tgtttgattt
     3841 tacttgctgc ctctccatgc gcagtattca ccaaagccgc aaggatattc gcttccagat
     3901 tgtctttcag gctgccgccg ttgacagcgg tattaatcag tgcggcactg cccgcattgg
     3961 ccaggttgac ggtcaggttg ttgatccact gcttatcgct gacattgttc aatgccgaag
     4021 cgccgatttt gtcggctacg cctgcggtag cggcggcaac caccagattt ttcaccgtgc
     4081 tgcttctgcc cagctctttc agggtgttac cgatattgcc tttgttgttg atgaacgata
     4141 cggaagcctg gctggccaaa gaggcgaatg ctgcatcggt tgcggcggcg gccgcaccgt
     4201 ttaatcccaa tacggctccg gttcctgcgc ctgaggtgac cacggtaacg gccagtgcga
     4261 taattgcggc tccggctccg gttaggcctt cctgtttata gtcccatttg tcgtaagcga
     4321 gctgtacttg gttccagttc acgtccttga ccgtctgaag ctgtttcaga taggcatatt
     4381 cgggctgttt ggccagcttt tcgatttcgg ttttgaggtt gcctttgggg atgtcggcga
     4441 tatagccgcc gggagcggtc agcttaggca gtgccggccc ttcaaagctc ggtagcttca
     4501 gcgtttcaac cgtgctgccg cttccggcct gcttttgcca tacggtcgag ttggattcca
     4561 gcttttcttc ggtttggatg cggttaacga tgccttttag gataattttc gcatcgacac
     4621 gggctttttc gcctacacct gcctgaatgt cggcaccggc cagcgtggtt ttgaattcgg
     4681 taccttcgag cacggtatcc cagcctgaac gggtggctgc agtttgggcg acgacgcgga
     4741 caggcaattt ggtttcgttc agttcgtttt tactgtaatt gctcttacct accttgatgc
     4801 cgataaagcg gcggcttttt tggacatcca actcgtgctt gtgaatgcct tcggctgcca
     4861 gcagttgcat tgaggccgtc tgaaaaacgg atattcagac ggcctattgc tactttaaat
     4921 aatatttggg tttaaaatat catcgtattt cccaaattcg gggaacagaa aatcaattat
     4981 ttaaattttt catcctcata atatgggtga tcaaaaagct ctccttccca catatttatt
     5041 tcttctatgc ctttatcttt cataaactca tgataatcat aaaaatcttt tccatattgt
     5101 ccgtaaaaaa ttttcatatc cccaagccac atagcataac attcatcgca taaaatgacc
     5161 tccccagaga aatatttagg ctttgcatga taaaggtagc cttgctcaca tcttgggcaa
     5221 attttaattt ctttatccat aagagattcc tttcttaatt atttctgagg atatgcagaa
     5281 atgattttat ttgttccttt ttgcacaaca atccgcactt ttgtttctcc ttttgttcca
     5341 ataggtttct tcatatctac aagatatacg gatgaatcat ttggcaaagg atttcctttc
     5401 attctccaag cttcatcaac caaaggcaaa acttctttac gggacacatt aaaaacagaa
     5461 tgaacaggtt tgtttggatt tggaattgta tgggctaaaa catgtttaat cctattacca
     5521 tgcttagcat ctaacccata atctaacccc gccggtgttg tccaaacctt attaacctta
     5581 tcataagtaa gcttgattcc ggtctgcttc tgaatttcct gtatggcttt agccgtatca
     5641 actgcttcgt ctcccgcctt cagaacataa gccccgcctc ggctgatttt agtcgcacct
     5701 gccggaacaa agggaacggc agctgcggcg gcatccacac caaaatcaat cgccgcttct
     5761 cgagccatct gcttatcgcc aatagatttg gcgtaaatcc atttaccgcc gtcccatacg
     5821 aggttgccga tatcccaaat aatatctaat gcattatttt taacagctgt ttcggaagca
     5881 tttgccgcca catcaacatt gcctcctgta acacctacag tcgctccggc taccaatttt
     5941 gcatacgcag taatattcgc tttagctttt tcaatttcag aagcagtcat accgctgaaa
     6001 tcggtattct taaccaaagc ctccccgaca atctccccca cgaccgcacc aatcgcgccg
     6061 tcctgacact tgcccttatt cgccgccgct gccgcacagc ccgctatggc atgggcaatc
     6121 ttatgggcaa tgtagtgctg atccaattgt ttgattttac ttgctgcctc tccatgcgca
     6181 gtattcacca aagccgcaag gatattcgct tccagattgt ctttcagact gccgccgtta
     6241 acggcggtgt taatcagcgc ggcactgccc gcattagcca agttgacgtt gaggttgttt
     6301 acccaagggg tttcgctcca agtggcaagg gaggaagcac cgattttgtt ggatacgcct
     6361 gcgatggccg ctgctacaac cagttttttc actgtgcggc ttctgcccag ctccttcagg
     6421 gttttaccga catcgccttt attgttgatg agcgatacgg aagcctggct ggccagcgag
     6481 gcgaatgcgg catcggttgc cgctgcggcc gcgccgttta agcccagtgc ggctccggct
     6541 cccgcgcccg cagtaaccac ggtaacagcc agcgcaataa tcgctgctcc ggctccggtt
     6601 aagccttcct gtttatagtc ccatttgtcg tacgccagtt gtacctggtt ccagttgacg
     6661 tctttggtga cttggagctg tttcaaatag caagcgtagg gggtgtcttc agcacgcacg
     6721 catctgggca gtatataggg aatctgaata tttacttgca taacaaatgc cgtctgaaaa
     6781 aattgagctt ttcagacggc attgagccgt aaatcatgga acgcgtgcgc gctgaagcac
     6841 acaccttacg catggatttt aggtttcatg caggctacag cttgctgcta ttcatcaaat
     6901 tgcggccatt gaaagtctgt tgttttactt tcacctctca acagtctaat catatcgctt
     6961 ttgagaaact caaaaaaatt tttaatatta ccaacataga gcatagcttc acatagtgaa
     7021 ctacatgcag atttaatgtc ttcattgtca atagcatatt gatattcctt catatgctga
     7081 aaaaaagaat caaagtcttc ttctaattca tcattccaat cagatgaata gttagaaagc
     7141 cattgtaagt caagaggatc ttcactattc aatttttcag ttgtggcttt ctcataaaga
     7201 tcaaatcctt gtttaattcc taactctctt aaactttctt ttactacatt aaaatttttc
     7261 atctgaatca ccttatttaa gattcaattt tcgcccttgc cctgctaatg tcttagctta
     7321 attttgagcg agttttaggt ttcatgcaga ctacagctta ctcagcacac acgagtctaa
     7381 acagtataca gggaatctaa atatttactt tcataacaaa tgccgtctga aaaaattgag
     7441 cttttcagac ggcatatggc cgtaaatcat ggaacgcgta tactgaagcc cacaccttat
     7501 gcatgggttt tagatttcat gcaggctaca acttgctttc tattcatcaa gagatggcca
     7561 tgaaaaacta ttctttttat actcagcact caataatgtt gatatatcag tttttattga
     7621 atcaaatata agagatagat tacctgcgta aatcatagcc ataaataaag aattactggc
     7681 aattttgaaa tttttatcgt ttagggctaa ttggcatact tccatataat ctaaaaagtt
     7741 ttttaaatcc tccttaaatt cattatccca attcccgtct gaagtataat ctttaatcca
     7801 tttcatatta gctgtttcat gattaacttc ttctgatact tttggatctg tcaaatcaaa
     7861 cccttgataa agccccacat taatcaagat tttttttata tcattcaatg tttccataaa
     7921 atttcctatt ttaagtttaa tttacgacct tttgctgccc cagttttcat ttggttaagc
     7981 gaaccatcca tatttagaac aaacttaaag ttcccatttt tatcaaaaac ctctaaatga
     8041 tttttatgtt ggccatctaa ataaaaccta tcaccggttt ttaataaccc ttggtttctt
     8101 tttaccaaga agacagactg cccttgctgc gtcggaagcg ttgtcttttc tgaaatttga
     8161 gccagctgtt ttccaaaagg attatttttc atgtatgtac tcatattcgg tacagcacct
     8221 ttattaggga tataaggacg atttttttct aaaacttcct tgaccttttg tgccgcttcc
     8281 cctttattag cgcgattcag ctctgttccg acgacaatat caataacggc tttggcatcg
     8341 ttccaatcca atgtttcgtc gaataaggtg gtcaggttgt cggctaaatt ataaccttcg
     8401 tctttcaacg tctgttttaa atctctaacg ttgattttcc cgttttttaa tccttttctg
     8461 gctaccttat aaaccacttt tgcagcagtt acaacagctt taaccgcatt attttctacc
     8521 gcgttttgtg cggtttgtgc agcagtattg acatctcctc ccgttacgcc tgcaactgta
     8581 cctgccgcaa gtttggcata ggcggtaatt ttcttaactt ccagatctaa ttgttccggg
     8641 gtcatatcgc taaaatcggt atttttaacc aaagcttccc caacaatctc acccacggct
     8701 gcgccaatcg cgccgtcccg acatttgcct ttatttgcta ccgccgatgc acagcctgct
     8761 acggcatggg ctatcttgtg ggcaatgtag tcttcgctga gattaaattt gattttgctc
     8821 gctacttctc cgtgtacggt actgactatc gcacccagtg cggcatcgcc caagttgtct
     8881 ttcaggctgc cgccgttgat ggcggtatgg acacttgcgg cagcggtgct gttgatcagg
     8941 ttagcggtca gtttgcctgc tgcgggactg tgaaaatgtt tgctgacggc ttcggctgct
     9001 tgggtgttca gcccgcttat gccctgcagt acgcctgcgg ttacggcggc ggtggcggcc
     9061 tgtctgacgg tgctgctttt gcccagttct ttcagggtat ggtttatgtc tcctttgttg
     9121 ttgatgaggg aaactgcggc ttggctggcg agactggcca gtgcggcttt gcctgcggct
     9181 gtggtgatag ctgcagctga tgtgcctgct gctactccgg ttgtggctgc cgttcctgct
     9241 gctactccag ttccggctgc cgttcctgct gcggctcctc ccgctcctgc gcctgccgcg
     9301 cccgccgttc cggcggctgc cggggcggac agtgcaccgt aggtcaatac ggttacgacg
     9361 ataacgacga cagctgctgc tgcgggtgtc atgccctcct gtttgtagtc ccatttatcg
     9421 taagcaagct gcacctgatt ccagttgatg tttttcgcaa cttgaagttg tttcaaataa
     9481 gcatactcgg gctgtttggc gagtttttcg atttcggttt tgaggttgcc tttggggatg
     9541 tcggcgatat agccgccggg agcggtcagt acgggcgcaa cgggaccggt gaaactcggc
     9601 aattgcaagg tttcgatgtt actgccccat cctgcctgtt tttgccatag agtagatttg
     9661 ctgctgctca cggtttctgt gtggatgctg cttttgatcc cttcgaggat aatcttggca
     9721 tctgcccgtg cctgctcgcc tacgcctgcg cgtatggttg cgccacccag tgtggtttca
     9781 aactgtgtgc cttgcagttt ggtatcccaa cctgattgca gattggcaga ttctgcaact
     9841 acccttgagg gcagcgcggt tttcatgact tgggtggtgg tgtcgtgtgc tttgctgtag
     9901 ctgatgccaa gaaatctgcg ccttttttgg ctgtcaagtt tgtcgtagtt gagctcttct
     9961 acggcataga gtgtcaattt ccgcccggct tcgatgttaa tgctgccttt gggggcatcg
    10021 aatgcggtgg cgtaggcgtc gatgttgcca ccagatttga tgtcgatgcc ttgggatgcg
    10081 ctgaggttta ctgcgtcggg cttggcgttt ttgtgttctt tgacttcggt aatgtgtttg
    10141 cggttgtacc atttgccggt tttgtagctg cggcgttcaa aggtatagag ttcgctctgt
    10201 ctcgcatagt aatattggtc accgtaagat tgaattttga ttttgccgtt ttccgaactg
    10261 atatccgtgg tgctgagcag gatgcgactg ttctcattgg catacggtgc agagagggta
    10321 acacctgttt ttcctgaaat ttcagatggc ctgctgaaaa tggcatagcc gtatttatcg
    10381 ctgccttgct gaccatattc aaaagtatca aatacaccgc tgatgtcaat ggctgattga
    10441 agtcgacctt cttgcagttc ctctgcggct ggtgcaggta aaaatcctgc agcttggata
    10501 tttgcctgtt gggtggcagc aactttggag ccctggatac ggataccacc tgcagcgagc
    10561 agtttgatat tttgaccgct aagggtgcta ccttggtttt cgtgaccact acccggttgg
    10621 gaaactgtta aaagggcttg ttgtaacaat tgtttacgtt caagtaacgc ttttactggg
    10681 gattggagtt ctgcccaagc ctcatcagca gcatttatct ctgctcgtaa accacgtaat
    10741 ctggcctcac tatcaccgaa tactttgtca cgcctcttat atttacgcct caacatttgt
    10801 ggaagatcct gtgctttacg atatttagga tcgctcgtta acttactaag ctcctgctct
    10861 acatcagtaa gttgctgtgt gatattgtgt ttatctgttt tcaattgata gttactaaac
    10921 gtattcctaa tactgtttag tgaaatattc cctttagttg ccactaaagc caaatctttc
    10981 cctgcggcca tatttgctgc atcaatatcc acctctcccg ccacaatccc gatattgcct
    11041 ttagctgaaa cgctggctgt ttgcgcactc ggattgccgt tatttcctgc tctggcactg
    11101 atttggaatg tgccgttgtg gttcacggcc aaatcacctg cagaaacgat acggttaccg
    11161 ggttcaacgg ttaaagggtt attaccgccc gattctatcg acatcatacc ggacagtggt
    11221 ttcagttccg ctgaacgcat agttgccgta tcttgggttt cccaatcgat atgcccccgt
    11281 ttgatgatgc ctccgccagc tttgatgttt atcgcgccac cgcgcagggt agtattgtcc
    11341 aaaacctgta atgcgctgct gttcaatgac aatacaccat ctgccgccaa agtactttta
    11401 ctgttttgct ggtcgttttg taaaatttga ccgctgtctt ttcctttgcc tttaccctgt
    11461 gcactgatac tcatatgacg acgtgaatga gcatcaagct gattaagcgt catatgacca
    11521 tgatttgtat taatctgggt attgtgaccg gaattgagct tgctgttatt aatggttaaa
    11581 gtttgatccg catccacttt cagtgatgcg cgggcattca ggtgtacatc ctgcaccacc
    11641 atgctgcctt tattgctgtc taagctgata tgaccgccgt taacggtgcc gttgcctaaa
    11701 tctaattgac ctccggcaac cagtttcaca tcgcctgcag aagcataaat atcggtattg
    11761 tccattttca gacggccttt accgactgaa ccagcattaa tgtctccttc cgcaatcaag
    11821 gtatttagac cgttgaaatc aacattgccg ttggcaagaa gagatacgcg tccaacttcg
    11881 gcaacagcag tcagaccgtc tgaaataata ttgccttgaa gtgctgccgt atcaatattc
    11941 tgactggcat ttatccaact ctgattcaag ctgatgttgc ctttagtcgc gctcatctgc
    12001 acattaccgc cactggattg cagattactt tgacgcacac tcaagctacc tgcctgaata
    12061 tccagattct tttctgcagt caaggtgtta ccgttgctac tgatgagggc ggtgttgtct
    12121 gccctcaggc tgatactttg tgttgataag tctttatcgg cattcaaatc cagatcctta
    12181 cctgcatgaa tatacagatt gccggatgca ttcagattgg aggcttttgc ctgaatgtcg
    12241 ccatcagcca tcagtaccac ctgctttccg cctttaatgt taccgttgtt caaacggatg
    12301 ttggaggcaa cggtcgaggt ttctaaagaa agcggtttgc ccgattcaat gtgtgcagtg
    12361 tcttgagcct caattacagc agcactgcta atactaccgt tagataatac ggttacgttt
    12421 tcagcaataa tacgggtatt ttcacccaat tcagtatcgc ctttggtgga gctgtacacg
    12481 gaactgcccg cttgaatagt agcatcattg atcgtagtac gaccgccggc cgacagatta
    12541 gccgagcctt tggcattgtt cacattagtt ttactctcaa tcaccaaatt atgaccagca
    12601 tttaataccg tggtagctgg gcgactgccg ttattctgca ccacggctcc gttacgcaag
    12661 ctgatatctt ctcccgtctc aataaccaat aagcctttgc tctcgatccg accaccattg
    12721 gagataaatg tgcctgccgc tcctttttcg gtggtttcga tggagagata agtcggtgaa
    12781 gcttcggtgc cgtcggcagt ggtggcgatg cggccgctgt tttcaatgcg gcctgacgaa
    12841 gtcacaatca attgcttggc cgcttcgagt gtgccggcat ttttgacgcc tacgcctttt
    12901 tcattggcaa tcagtgtgat gctgtcggcg tacataccgc ccagtgcggc agtatcaagg
    12961 gcaatagtcg gtttcgtacc cgctgccgta cctgcactga tttcgccgct ggcgtaatct
    13021 actttctgag gaccggtaga aaccgccagg tttttaccct gtaatttccc ctgcaaagca
    13081 actgcacgag caagtatctc ggtgtagtcg gctccgcctt tatcattcca acctgctgct
    13141 cctacggtca atgtgccttg acgcacatca aatcctgtca gtgcaccgtc tttgccgatt
    13201 tggggcgcac cggtagttaa gatgccccga ccgacatttt taaagccgcc gccattaacg
    13261 gtaatgccgt tggggttggc aataatcacg tcggcctttt ggccgcctac ggtaacgatg
    13321 ccgttgagtt tgctagccgt accgcgtacc tcgttcaaaa tcaattgcgc accgcctttg
    13381 accagaaacg gattattgtt acggtcgttg tttaacactg cccctttgtt gtcaacatca
    13441 aactgcgtat agcggttgtg gctcaatccg cgtccattcg gagtttggat attcaccaag
    13501 ggggcaccag tgttggtttt aaggataacg acctgctggt ttttaggtgc tgatttgtcg
    13561 gtggtaattt gggcatgggc aggcaatacc atactcaggg aaaccaaaga gcagaccaag
    13621 gttttaaggg tggttttgag tttgccgcaa aggtcgcctg aagttttcag tgaaacagaa
    13681 accgaactgc ctgcctgttt acctttgccc tggctgttgg cagtttcggc tactgcaacc
    13741 atggtgctgt gcttt
//
LOCUS       DAWEYF010000038        13539 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.038, whole genome shotgun sequence.
ACCESSION   DAWEYF010000038 DAWEYF010000000
VERSION     DAWEYF010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13539
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.038"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..79)
                     /locus_tag="WGN93_000808"
     CDS             complement(<1..79)
                     /locus_tag="WGN93_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ0226735.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="WGN93_000809"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="WGN93_000809"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ0226736.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPDLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERIRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMVGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIVEA"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WGN93_000810"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WGN93_000810"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ0226737.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQMPSEKEPKPVAKPTYTQ
                     VFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAGKLNATVVDMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDGLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WGN93_000811"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WGN93_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ0226738.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEAEGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDSLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /locus_tag="WGN93_000812"
     CDS             4804..5868
                     /locus_tag="WGN93_000812"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ0226739.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     ISLEKMATKYAKGELNQIVK"
     gene            6027..6848
                     /locus_tag="WGN93_000813"
     CDS             6027..6848
                     /locus_tag="WGN93_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding family protein"
                     /protein_id="HEZ0226740.1"
                     /translation="MNRTTFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLD
                     HKDKSLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIE
                     VDGQLITLESGEFQIYKQDHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAF
                     NQLPSGKAEYHGKAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKA
                     DEKSHAVILGDTRYGGEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            6987..7664
                     /gene="tsaB"
                     /locus_tag="WGN93_000814"
     CDS             6987..7664
                     /gene="tsaB"
                     /locus_tag="WGN93_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ0226741.1"
                     /translation="MQADFNRPVLAIDTGTSYLSLALRADGETRLFHQEVGSRQSELI
                     LPEIRTLFHDAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASMPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADITLPEGHVFSDG
                     IGNAFALENRPPFAGKPDMPTAADFLNLAEEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            7661..8101
                     /gene="rimI"
                     /locus_tag="WGN93_000815"
     CDS             7661..8101
                     /gene="rimI"
                     /locus_tag="WGN93_000815"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ0226742.1"
                     /translation="MNIRRPSPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGRLAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEGTQRLLLE
                     VRAGNIGAQTLYAAHGFSIAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8095..8832
                     /locus_tag="WGN93_000816"
     CDS             8095..8832
                     /locus_tag="WGN93_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ0226743.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8894..9535
                     /gene="pyrE"
                     /locus_tag="WGN93_000817"
     CDS             8894..9535
                     /gene="pyrE"
                     /locus_tag="WGN93_000817"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ0226744.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9609..10043
                     /locus_tag="WGN93_000818"
     CDS             9609..10043
                     /locus_tag="WGN93_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226745.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10040..11350
                     /gene="argA"
                     /locus_tag="WGN93_000819"
     CDS             10040..11350
                     /gene="argA"
                     /locus_tag="WGN93_000819"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ0226746.1"
                     /translation="MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFTEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            11446..13461
                     /locus_tag="WGN93_000820"
     CDS             11446..13461
                     /locus_tag="WGN93_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ0226747.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARTLS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCAAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPDRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPADCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGEIGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFTDGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGIPELPHYLGSVGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGASWTDEYGNPQKYEVCKCRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSAQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
BASE COUNT         3023 a         4222 c         3597 g         2697 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccaaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcctg
      121 accgattaaa ttcatatttt aaaacaatat cctgcctcca aaacccacat cgtgctataa
      181 tccacaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gtaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcacagg aaaaagtgtt ctccgacttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaat cccgacctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgtgga cgtcgtcttc ggcccgcaaa
      601 cgctgcaccg cctgccaaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctccttc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgacc gaaatcgcca
      841 accttgccca gcaaggtgtg aaagaaatca acctcttggg acaaaacgtc aacgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgt atcgtccacg
      961 aaatccccgg catcgaacgt atacgcttca ccaccagcca tccgcgcgaa tttaccgacg
     1021 caattatcga gtgctaccgc gacctgccca agctggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgcgccatcc gtcctgattt gtgcctcagc tccgacttta
     1201 tcgtcggctt ccctggcgag accgagcgcg agttcgagca aaccttgaaa ctggtcaaag
     1261 acatcgcctt cgacttgagc ttcgtcttta tttacagtcc gcgccctggc acgcctgccg
     1321 ccaacctgca cgacgacaca ccgcatgaag aaaaagtgcg ccgcctcgaa gctttgaacg
     1381 aagtcatcga agccgaaacc gcgcgtatca accaaaccat ggtcggcacg gttcaacgct
     1441 gcttggtcga aggtatctcc aaaaaagacc ctgaccaact gcaagcccgt accgccaaca
     1501 accgcgtggt caactttacc ggcacacccg acatgattaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaaattgt cgaagcctaa accctcacgc
     1621 cgaaaaaatg ccgtctgcag cgtttcagac ggcattttgc cttgtatcgg cagacgacgg
     1681 cgcggccggg cggcttaatt tgccgcatcc cgatccgaca gccacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa acccaaaccg tccaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacaaagcgc
     1981 atatcgacga cggtggcgtt cagttttccg gcgaccgcca atgcgggggc gaccatactg
     2041 ccgaaggcaa tgaatgcggt tttcccacct tcgcggcgga taatgccctt gccgatttcc
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg catccgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggaatg cagcgcaaaa agctcaaatc gtacagaccg
     2281 gcatgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggc
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catgccttcg cacgccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg caatgccgac atcgaaataa cggtcgggga atcgttgttc aaactccacc
     2521 agtccgctgc cctcgcgcat cgcgggcgtg atggcgatca aacgctcgtc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcgac gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgcct tctttaggca gcttggcgac ggcgtggtat
     2701 ttgacggggt cgttttcagc gagtttgtag ccgttgcctt ttttggtgat gacgtgcaga
     2761 agctgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgtccgtcca cggggccggt gtagcggaag ccgaagtttt caaacaaaga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttgt gttcgacttt ttgggcaaac
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 aggccgtgca tatcgcgcac gacgttgctg gcaaggtatt tcggcagcgc gccgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgcct
     3121 gcgcaattca aggcttcaaa cgcctgcccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caagagtttg tctgccgccg ccatgcccaa cgccgcgccg
     3241 atggatgtgg aagaatgccc tacgccgaac gcgtcgtatt ccgactcgct gcgttttggg
     3301 aagccagcta aaccgccgta ttggcgcatg gtgtgcatct ggtttttcct gcctgtcagg
     3361 attttgtgcg gatagctttg gtgtccgaca tcccatacca gcttgtcttc gggcgtatcg
     3421 tacacatagt gcagggcgat ggtcagttcg accgcgccca aattgctggc gaaatgcccg
     3481 ccggtctgcc cgacagattc cagcagaaag gcgcgcaact cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccgggtgca acggccaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gcttggtata aatctgcgtg
     3781 gtcgaaaggc tgctgtgccc gagcagctcc tgcaccgccc tgatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcgg cagatagttt
     4021 ttcagggctt ccacgctttt gccggtcagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagt tcgaacagcg cgtgatcgcg caccgccagc
     4201 gagtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cggcagggct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt tgaccagcca ggcgcaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgttgc
     4441 gacaagccct gcggcacgcc gccttcagct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgct ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cccccgtcat cgttcaagca tccgccggcg cgcgcaaata cgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggct gtcgaagaat tcccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atctcctgat gtatgccaac gctccatcca actgggtttt
     5101 tcttcggtaa tgatggacgg ctcgctgctc gaagacggta aaaccccttc ttcttacgaa
     5161 tacaacgtca acgccacccg taccgtcgtt aacttctccc acgcctgcgg cgtgtctgtc
     5221 gaaggcgaaa tcggcgtatt gggcaacctc gaaaccggcg aagccggcga agaagacggc
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctga ccagcgtcga agatgccgta
     5341 cgtttcgtta aagataccgg cgttgacgca ttggctattg ccgtcggcac cagccacggc
     5401 gcatacaaat tcacccgtcc gcccacaggc gacgtattgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gctccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgacaccgac
     5641 ttgcgccttg cgtccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttt
     5701 gacccacgca aatacctgag caaaaccatt gaggctatga agcaaatctg cctcgaccgt
     5761 tatcttgcgt tcggttgcga aggtcaggca ggcaaaatca aaccgatttc tttggaaaaa
     5821 atggcaacca aatacgccaa aggcgaattg aaccaaatcg tcaaataaca ggttgcctgt
     5881 aaacaaaatg ccgtctgaac cgccgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcggtatgta aaaaaagata caataactag ggtgtttata tattatctat
     6001 atctgcgtat gactaggagc aaacctgtga accgaactac cttctgttgc ctttctctga
     6061 ccgccgccct gattctgacc gcctgcagca gcggaggggg cggtgtcgcc gccgacatcg
     6121 gcgcggggct tgccgatgca ctaaccgcac cgctcgacca taaagacaaa agtttgcagt
     6181 ctttgacgct ggatcagtcc gtcaggaaaa acgagaaact gaagctggcg gcacaaggtg
     6241 cggaaaaaac ttatggaaac ggcgacagcc tcaatacggg caaattgaag aacgacaagg
     6301 tcagccgctt cgactttatc cgtcaaatcg aagtggacgg gcagctcatt accttggaga
     6361 gcggagagtt ccaaatatac aaacaggacc actccgccgt cgttgcccta cagattgaaa
     6421 aaatcaacaa ccccgacaaa atcgacagcc tgataaacca acgctccttc cttgtcagcg
     6481 gtttgggtgg agaacatacc gccttcaacc aactgcccag cggcaaagcc gagtatcacg
     6541 gcaaagcatt cagctccgac gacccgaacg gcaggctgca ctactccatt gattttacca
     6601 aaaaacaggg ttacggcaga atcgaacacc tgaaaacgcc cgagcagaat gtcgagcttg
     6661 cctccgccga actcaaagca gatgaaaaat cacacgccgt cattttgggc gacacgcgct
     6721 acggcggcga agaaaaaggc acttaccacc tcgccctttt cggcgaccgc gcccaagaaa
     6781 tcgccggctc ggcaaccgtg aagataaggg aaaaggttca cgaaatcggc atcgccggca
     6841 aacagtagca tttgaaaaat gccgtccgaa cacgatagtt taccgttcgg acggcatttt
     6901 tgcgccatac tgccctagga cacgacggca cggcaggcaa gctgatttca ctatataatg
     6961 ccgtctgaac caacgagaac cataccatgc aagctgattt taaccgtccc gtcctggcca
     7021 tcgataccgg tacttcctat ttgtcgctcg cgctgcgcgc cgacggcgaa acccgtctgt
     7081 tccatcagga agtcggcagc cgccagtccg aactgattct gccggaaatc cgcacgttgt
     7141 ttcacgatgc aggcattacc gccgccgatt tgggggcgat tgtttatgcg aaaggtcccg
     7201 gcgcgtttac gggactgcgt atcggcatcg gcgtggcgca aggtttggca acgccgtttg
     7261 atacgccttt aatcggcatc cccacgctcg atgccgccgc ctcgatgccg ccgccgcaaa
     7321 gctgcatact cgccgctgcg gacgcgcgta tgggcgaagt gttttatgcg tggttcgaca
     7381 cgctgaaccg ccgccgtttg agcgattatc aagtcggtag ggcggcagac attaccctcc
     7441 ccgagggaca cgtcttttca gacggcatcg gcaatgcgtt cgcgctggaa aaccgtcctc
     7501 ccttcgcagg taaacccgat atgccgactg ccgccgactt tctcaatctg gcggaagaag
     7561 gcggttttcc cgccgtcgct gcggcacacg ccgaactgct ctacgtccgc aacaaaatcg
     7621 ccttgactgc caaagaacag gcggaacgga aagcccgaac atgaacatcc gccgcccctc
     7681 accgtccgac tgcgccgcac tcgccgcgct cgatgccgtc tgcaacccgt ccgcgtggac
     7741 gcaacgccaa tttgagtccg cactggtttc gccgtccgaa caggttttcc ttgcggaaaa
     7801 agacggcagg ttggccgcct ttatcgtttg gcagaacctg cccgacgaat ccgaactgca
     7861 cctgattgcc accgcgcccg aatgccgccg ccggggtgtt gcgtccgccc tgctcgaata
     7921 ctggttcgca catctgcccg aaggcacgca acgcctgctg ctcgaagtcc gcgcgggcaa
     7981 tatcggcgcg cagacgctgt acgcggcgca cggcttcagc attgcgggca ggcggaaaaa
     8041 ctattaccgt acagccgacg gtaaaaccga agatgccgtc ttgatggaga aaatatgtta
     8101 agcgcgcgct acctccacct gcacgaagct ttgggtttag gcccgatgtg gctgaaacag
     8161 gccgccgccg tcctgccgcc caaaaacaca cccgcaaccc cggcacaggc acgtcctcaa
     8221 accgtccgcg ccgccccgat ccgcccttcc caaccccata acggtcaggc gcggctcgaa
     8281 acgatgaaag cgttggaaac cgccgccgta cctacgcgca aacccgcgcc tgaaaccgaa
     8341 acgcctctgc ccggcctttc agacggcatc gcccccgttc ccgccgcttc gggcatcacc
     8401 aagcttgccg tcgtcagcct ttgcccaccg atcgaggatg cggtttacgg gcaactgttc
     8461 tacggcaaag cgggtgtcct gcttgacaat atactcaaag ccgtaggact ggatgccgcc
     8521 tatgtccaca aaacctgttg ggtgaaaacc gccgccgtcg gcaacccgat gccgtctgaa
     8581 gcggcaatcg aaaccgcgac ggtttccgtc atgcaggaac tcgacggctg ccgcgccccc
     8641 gccgtcctat tcctcggaca ggcttttgtc cagcctgaac ggcaaacgat gattgaaact
     8701 ttgtgcggca gccgtccctt cttcatcatc gaccatcccg cccggctgtt gcgccaaccc
     8761 gaacttaaag cccgcgcctg gcaggtgttg aaacagttga aacgcgcctt gcggcaaggc
     8821 ggcggcagtt gaagcgcacc gcacggggcg gtagaatcgc aactgcgtcc caatatctga
     8881 cagaaagcac aaaatgaccg atttccgcca agatttcctc aaattctccc tcgcccaaaa
     8941 tgttttgaaa ttcggcgaat ttaccaccaa agccggacgg cggtcgccct atttcttcaa
     9001 tgccggcctc tttaacgacg gcttgtccac gctgcaactg gcaaaatttt acgcacaatc
     9061 catcattgaa agcggcatcc gattcgatat gctgttcggc cccgcctaca aaggcattat
     9121 tttggcggcg gcaaccgcga tgatgctggc ggaaaaaggc gtgaacgtcc cgtttgccta
     9181 caaccgcaaa gaagccaaag accacggcga aggcggcgtg ttggtcggtg cgccgcttaa
     9241 aggccgcgtg ctgattatcg acgacgtgat ttccgccggc acatccgtac gcgaatcgat
     9301 caagctgatt gaagcggagg gcgcaacccc cgccggtgtc gccatcgcgc tcgatcgcat
     9361 ggaaaaaggc acgggtgagt tgagcgcggt tcaggaagtg gaaaaacaat acggtctgcc
     9421 cgtcgccccc atcgccagcc tgaacgattt gtttattctg ttgcaaaaca accccgaatt
     9481 cggacagttc ctcgaacccg tccgagccta ccgtcggcag tacggcgtag aataaaaaca
     9541 aagcatatgc cgtccgaacc gccttacgcc tcagacggca tcaaacctga cacacacgag
     9601 gaaataccat gcccgcctgt ttctgccccc actgcaaaac ccgtctctgg gtcaaagaaa
     9661 cccaactcaa tgtcgcccaa ggcttcgtcg tctgccaaaa atgcgaagga ctgtttaaag
     9721 ccaaagacca tctggcaagc acgaaagaac ccatattcaa cgatttgccc gaggctgttt
     9781 cggatgtcaa actcgttcac cgtatcggca cgcgcgccat cggcaagaaa cagatttccc
     9841 gtgacgaaat cgccggcatc ctcaacggcg gcacaaccca gcccgatatt ccgcccgcaa
     9901 ccgccgccac ccctgctgcc gcaccgcagg ttaccgtacc gcccgccgcg cccgcccgtc
     9961 aggatgggtt caactggacg attgcaaccc tgtttgccct tatcgtcctc attatgcagc
    10021 tttcctacct cgtcatccta tgatcgtgcc cgacctcttt gtcgcccact tccgcgaagc
    10081 cgccccctac atccgccaaa tgcgcggcaa aacgctggtc gccggcatag acgaccgcct
    10141 gctcgaaggt gataccttaa acaagctcgc cgccgacatc gggcttttgt cgcaactggg
    10201 catcaggctc gtcctcatcc acggcgcgcg ccacttcctc gaccgccacg ccgccgcgca
    10261 aggccgcacg ccgcattatt gccggggctt gcgcgttacc gacgaaacct cgctcgaaca
    10321 ggcgcagcag tttgccggca ccgtccgcag ccgttttgaa gccgcattgt gcggcagcgt
    10381 ttccgggttc gcgcgcgcgc cttccgtccc gctcgtatcg ggcaacttcc tgaccgcccg
    10441 tccgataggt gtgattgacg gaaccgatat ggaatacgcg ggcgttatcc gcaaaaccga
    10501 caccgccgcc ctccgtttcc aactcgacgc gggcaatatc gtctggctgc cgccgctcgg
    10561 acattcctac agcggcaaga ccttccatct cgatatgctt caaaccgccg cctccgtcgc
    10621 cgtctcgctt caggccgaaa aactcgttta cctgaccctt tcagacggca tttcccgccc
    10681 cgacggcacg ctcgccgtaa ccctctcggc acaggaagcg caatcgctgg cggaacacgc
    10741 cggcggcgaa acgcgacggc tgatttcgtc cgccgttgcc gcgctcgaag gcggcgtgca
    10801 tcgcgtccaa atcctcaacg gtgccgccga cggcagcctg ctgcaagaac tcttcactcg
    10861 caacggcatc ggcacgtcca ttgccaaaga agccttcgtc tccatccggc aggcgcacag
    10921 cggcgacatc ccgcacattg ccgccctcat ccgcccgctg gaagaacaag gcatcctgct
    10981 gcaccgcagc cgcgaatacc tcgaaaacca catttccgaa ttttccatcc tcgaacacga
    11041 cggcaacctg tacggttgcg ccgccctaaa aacctttacc gaagccgatt gcggcgaaat
    11101 cgcctgcctt gccgtctcgc cgcaggcaca ggacggcggc tacggcgaac gcctgcttgc
    11161 ccacattatc gataaggcgc gcggcatagg cataagcagg ctgttcgcac tgtccacaaa
    11221 taccggcgaa tggtttgccg aacgcggctt tcagacggca tcggaagacg agttgcccga
    11281 aacgcggcgc aaagactacc gcagcaacgg acgaaactcg catattctgg tacgtcgcct
    11341 gcaccgctga ccgcaacgga aagccgccgc agaaatgccg tctgaacccc gtttcagacg
    11401 gcatttcccc gattataaag acctgcccaa ccctcaagga ccccgatgaa atcctacccc
    11461 gacccctacc gccattttga aaacctcgat tccgccgaaa cgcaaaactt cgctgctgaa
    11521 gcgaatgccg aaacgcgcgc gcgtttttta gaaaacgaca aggcgcgcac gctgtcggac
    11581 ggcattttgg cgcagatgca ggacacgcgg cagattccgt tttgtcagga acaccgcgcg
    11641 cggatgtacc atttccatca ggacgcggag tatccgaagg gcgtgtaccg cgtgtgtgcg
    11701 gcggcgacgt atcgttccgg ctatcccgag tggaaaatcc tgttttcagt ggcggatttc
    11761 gacgagctgc tcggcgacga tgtgtatttg ggcggcgtgt cgcacttggt ggaaaagccc
    11821 gaccgtgcgt tgttaacact gagcaaatcg ggcggcgata cggcgtacac gctggaagtg
    11881 gatttggaag caggggagtt ggtagaaggc ggttttcact ttccggcagg caaaaaccat
    11941 gtgtcgtggc gcgatgaaaa cagcgtgtgg gtgtgtccgg cctgggacga acgccagttg
    12001 accgaatcgg gctatccgcg cgaggtgtgg ctggtggaac gcggcaaaag tttcgaggaa
    12061 agcctgccgg tgtaccaaat cggcgaagac gggatgatgg tgaacgcgtg gcgttacctc
    12121 gatccgcagg gttcgccgat tgatttgatt gaagcgtctg acggttttta caccaaaacc
    12181 tatttgcagg tgtcggccga aggcgaggcg aaaccgttaa acctgcctgc tgattgcgat
    12241 gtggtcggct atctggcggg gcatcttttg ctgacgctgc gcaaggactg gcaccgcgcg
    12301 aaccaaagct atccgagcgg cgcgctggta gcggtgaaac tgaatcgcgg cgaaatcggg
    12361 gcggcgcagc ttttgtttgc gcctgatgaa acgcaggcat tggaaagcgt ggaaacgacc
    12421 aagcgttttg tcgtggcgag tctgctggaa aacgtacaag gccgtctgaa agcgtggcgt
    12481 tttaccgacg gcaaatggca ggaagccgaa ctgccgcgcc tgccctcggg cgcgttggaa
    12541 atgaccgacc aaccgtgggg tggcgacgtg gtttaccttg ccgccagcga tttcaccacg
    12601 ccgctgacgc tgtttgcgct ggatttgaac gtgatggaac tgaccgtcat gcgccgtcag
    12661 ccgcagcagt tcgattcaga cggcatcaac gtgcagcagt tttggacgac ttcggccgac
    12721 ggcgagcgta ttccttattt tcacgtcggc aaaaacgccg cccccgacac gccgactttg
    12781 gtttatgcat acggcggttt tggcattccc gagttgccgc attatttggg cagcgtcggc
    12841 aaatattggc tggaagaggg caatgccttt gtgttggcaa acatccgcgg cggcggcgag
    12901 ttcggcccgc gctggcatca ggcggcgcag ggaatcagca aacacaaaag cgtcgacgat
    12961 ttgcttgccg tcgtgcgcga tttgtccgaa cgcggtatca gttcgcccca acacatcggc
    13021 ttgcagggcg gcagcaacgg cggcctgatt accgccgccg ccttcgtgcg cgaaccgcaa
    13081 agcatcggcg cgctggtgtg cgaagtgccg ctgaccgata tgatccgcta tccgctgctc
    13141 tccgccggcg caagctggac ggacgaatac ggcaacccgc agaaatacga agtctgcaaa
    13201 tgccggttgg gcgaattgtc gccgtatcac aatctttcag acggcatcga ttatccgcca
    13261 gcgctcatta ccaccagcct cagcgacgac cgcgtccatc ctgcccacgc gctcaagttc
    13321 tacgccaaac tgcgcgaaac ctccgcgcaa tcttggctct actcacctga cggcggcggc
    13381 cataccggca acggcaccca acgcgaatcc gccgacgaac tcgcctgcgt gttgctgttt
    13441 ttgaaagagt ttttgggcta agggcgggga gcggcactgc cgccgcgaat gaaaaaaggt
    13501 cgtctgaaac tgctttttca gacgaccttt tttaatggt
//
LOCUS       DAWEYF010000039        13383 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.039, whole genome shotgun sequence.
ACCESSION   DAWEYF010000039 DAWEYF010000000
VERSION     DAWEYF010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13383
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.039"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(100..528)
                     /locus_tag="WGN93_000821"
     CDS             complement(100..528)
                     /locus_tag="WGN93_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ0226748.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLGYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(593..2341)
                     /locus_tag="WGN93_000822"
     CDS             complement(593..2341)
                     /locus_tag="WGN93_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ0226749.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSNIKKICETELTVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2668..4101
                     /gene="ccoN"
                     /locus_tag="WGN93_000823"
     CDS             2668..4101
                     /gene="ccoN"
                     /locus_tag="WGN93_000823"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ0226750.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4128..4739
                     /gene="ccoO"
                     /locus_tag="WGN93_000824"
     CDS             4128..4739
                     /gene="ccoO"
                     /locus_tag="WGN93_000824"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ0226751.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4744..4914
                     /locus_tag="WGN93_000825"
     CDS             4744..4914
                     /locus_tag="WGN93_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ0226752.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4938..6035
                     /gene="ccoP"
                     /locus_tag="WGN93_000826"
     CDS             4938..6035
                     /gene="ccoP"
                     /locus_tag="WGN93_000826"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ0226753.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6148..6273
                     /locus_tag="WGN93_000827"
     CDS             6148..6273
                     /locus_tag="WGN93_000827"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ0226754.1"
                     /translation="MHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            6475..7884
                     /locus_tag="WGN93_000828"
     CDS             6475..7884
                     /locus_tag="WGN93_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ0226755.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7986..11195
                     /gene="recC"
                     /locus_tag="WGN93_000829"
     CDS             7986..11195
                     /gene="recC"
                     /locus_tag="WGN93_000829"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ0226756.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWRQPATIGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGAGAA"
     gene            complement(11265..12833)
                     /gene="mtrF"
                     /locus_tag="WGN93_000830"
     CDS             complement(11265..12833)
                     /gene="mtrF"
                     /locus_tag="WGN93_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ0226757.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFELSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTLDPILAGITQQAAQIIHPDYAVGPEAN
                     WFFMAVSTFVIALIGYFVTEKIVEPQLGLYQSDLSQEEKDFRHSNEITPLEYKGLIWA
                     GAVFVALSALLAWSIVPADGILRHPETGLVAGSPFFKSIVVFIFLLFALPGIVYGQIT
                     RSLRGEREVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVG
                     LGGSVLFVGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMGYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13167..13379
                     /locus_tag="WGN93_000831"
     CDS             13167..13379
                     /locus_tag="WGN93_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226758.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIARDVSLTTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3350 a         3226 c         3552 g         3255 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgttttc ggcttgtaat cagacgcggg cgttgtccag
      121 ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga tgatttcgtc
      181 aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc gcgtaccggt
      241 ccggcaatag ccaaggacgg gatattcggc ttgtccgatg agttggcgga aggtttcgac
      301 atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag taacgcctgc
      361 ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt cgcggtcggg
      421 gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat cggctttggt
      481 cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt tgtttccttt
      541 actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa gtttaaccga
      601 acaaccagtt gtccaacagg tttcggtctg tgatatgtag gatggcagta tccgctgccg
      661 ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag tggatattga
      721 tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag gcataaccgt
      781 ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg ccgccgttga
      841 agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca aaatcgcctg
      901 ccgacgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg ggaagcggca
      961 ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa tcttcggtac
     1021 tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc tgacagcgga
     1081 tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga tagagtttgt
     1141 ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc agatcaaggc
     1201 acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg ctgttttcat
     1261 ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc tgcctcaaac
     1321 ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa taagattcgg
     1381 gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta ataccttcga
     1441 atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg aacgcggcag
     1501 gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt ccgagcaatg
     1561 tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg cggtcggcga
     1621 gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg acgtggagca
     1681 ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgtcagttct gtttcgcaga
     1741 tttttttgat attcgaaacc agcctgttgc ggtcgaaatc gggatatatg ccgcttaagg
     1801 caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag cccatctcga
     1861 caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc cctgtttccg
     1921 gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag cggtgcggca
     1981 gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa ccgcgttctg
     2041 tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag cggatttgcc
     2101 actcgccgcg tacggcggca gcgtgccagc ggttttttgc aatttgttcg agcggcatgg
     2161 acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc cgaatcagat
     2221 agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca tcttgtgtga
     2281 atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta taatgaatca
     2341 taactatcaa atatatcgtt aaacgggata gattaaatac ctttaaaatg cagcttaacc
     2401 tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg cggtcgggtt
     2461 gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc aaagggctcg
     2521 tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa atttagaaaa
     2581 aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga taaaaatctt
     2641 tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta caaagtggtg
     2701 cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt cggcgttatc
     2761 gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc ttggttccac
     2821 ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg cggttgcggc
     2881 ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct tttcggcggt
     2941 tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc cgtcgtcagc
     3001 ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc gatcgatatt
     3061 ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat tgccaaacgt
     3121 aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt ggcggtcgca
     3181 cttttacaca tcgtcaacaa tatcagcatc ccggcagggt tgatgaagtc ataccccgtc
     3241 tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc cgtgggcttc
     3301 ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca agcagcccgc
     3361 cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt tacctatatg
     3421 tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca atctttgggt
     3481 atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa cggcatcatg
     3541 accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt tctgattgta
     3601 tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat taaaacggtc
     3661 aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg tgcgttgggc
     3721 tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct gttcggcaaa
     3781 gaacagatgc acagcaccaa gctggtagaa gcgcattttt ggattgcgac catcggcgtg
     3841 gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat gtggagttct
     3901 ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg caccatgcct
     3961 tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg cattatggcg
     4021 tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat ccctgcggtt
     4081 tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg aaattacaac
     4141 aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta gtcagtgtcg
     4201 gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag ccggcaccgg
     4261 gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc cgtgagggct
     4321 gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag cgttacggtc
     4381 attactctgt tgccggagag tcggtttacg accatccttt ccaatggggt tccaaacgta
     4441 ccggtcctga tttggcacgt gtgggcggcc gctattccga cgaatggcac cgtatccacc
     4501 tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattccca tggcttgcac
     4561 gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt aaagtaggta
     4621 ctccttacag tgatgaggaa attgcgaaag cacctgaggc tttggcaaac aaatccgagc
     4681 tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac gtaaggtaac
     4741 atcatggata ttaacggtat tcgtgctctc ttcacggtat ggatctttat ctgtttcctg
     4801 ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa tgccgcaaac
     4861 agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg ttaatattgt
     4921 gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc tggaatatat
     4981 atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg ctgtctcaaa
     5041 atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat gagtgggacg
     5101 gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt gttttgacgt
     5161 ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac aaaggtctgc
     5221 tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat gagcaatacg
     5281 gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa gaccctcaag
     5341 ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac ggctctgatg
     5401 ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg ggcggtgatc
     5461 ccgataaaat tcacgagacc atcgaaaaag gccgtgttgc gactatgcct gcctggggcc
     5521 ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc ctttcaaaac
     5581 ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc agcggtccgc
     5641 ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt ttgggtccga
     5701 acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc gaaaccatta
     5761 ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa gacaaactgc
     5821 atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct ccggtgaaaa
     5881 aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct gctcctgcag
     5941 aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa gccgaggaaa
     6001 aagccgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt tgtgccgcct
     6061 gccatggcaa tgcggttccg ggtattcccc atgtaggcat caaagccgat tgggccgacc
     6121 gcatcaaaaa aggcaaggac acgttcgttg cacaaacacg cgatcgaagg tttcaatacg
     6181 atgcccgcaa aaggcggtcg cggcgatttg agcgatgatg aagtgaaagc tgcggttgac
     6241 tatatggtca accagtcagg cggcaaattc taacttgact gagtttccga tattatcggt
     6301 tatgaaaatc cagattcagt attgaatctg gattttttgt tttaacgggc atccggtttt
     6361 aaacgcagac tgcctatttg ttgtaatgaa ttttgacttt agtcataaag aattagtctt
     6421 tattgtttat aatcgcgcat catcacgata gccctatttt caaaaggacg attaatggat
     6481 acacaaatca aaactgaagc cgacaatcag agcaaccggc gttatctgac cgtttggcgg
     6541 tggcattttt atgccggtct gctggttatg ccttttctta ccctgcttgc cgttacgggt
     6601 ttgggtatgc tgctgtttgc caatattacc ggtaaggagg gcgagcggat tcatgttgtg
     6661 ccgcaggcaa cggtacaacc tctgtctgtt caggcggaag cggcacgcag tgccgttaat
     6721 ccggaaactt cgtccgtcgt tcagtatatt gcgccgcgtg ccgatgatat ggttgccgtg
     6781 ttccgtgtca acaatgaggg caaggcaacg atggtcgcgg tcgatcctta tacggcaaaa
     6841 gtggtcagta ccatgccgcg caatcagggt tggtattacg cgatggatga aatccacagc
     6901 gatatgatgc tcggttcgac aggtgattat cttttggaaa cggctgcatc gctgacgatt
     6961 atcatgataa tcagcggttt gtacctttgg tgggtgaaac ggcgcggcat caaggcgatg
     7021 ctgctgccgc caaaaggcag ggcgcgttct tggtggcgga atctgcacgg cgcgtttgga
     7081 acttgggtgt cgttgatttt actgttgttc tgcctgtcgg gtattgcttg ggcaggtatt
     7141 tggggcggca agttcgtgca ggcttggagt cagttcccgg ccggcaaatg gggtgtcgaa
     7201 ccgaaccctg tttcagtcgt gccgacccac ggcgaggtat tgaatgacgg caaggttaag
     7261 gaagtgccgt gggttttgga gcttacgcct atgcctgttt cagggacgac tgtgggcaaa
     7321 gacggtatta accctgacga gccgatgaca ttggaaaccg tcgaccgttt tgcgcgggaa
     7381 atcggtttca aagggcgtta tcagttgaat ttgcccaaag gcgaggacgg agtgtggact
     7441 ttgtcccaag actctatgag ttacgatatg attagtccgt ttgccgaccg cacggtgcat
     7501 atcgaccagt acagcggcaa aatccttgcc gacatccgct ttgacgatta caacccgttc
     7561 ggcaaattta tggcggcaag cattgcgctg catatgggta ctttgggctg gtggagcgtg
     7621 ttggcgaacg ttttgttctg ccttgccgtc atttttatcg gtatcagcgg ctgcgtgatg
     7681 tggtggaaac gccgtccgac cggagcggtg ggcatcgttc cgccggcgca gaaagtcaag
     7741 ctgccggttt ggtggatgat ggcattgccg ctattggcaa tcgcactgct cttcccgacc
     7801 gcactgcttg ccattgccgt gatttggctg ttggatacct tgctgctgtc gcggattcct
     7861 gttttgagga gatggtttaa atgacccgat gccgtctgaa gcgttcagac ggcattttgt
     7921 ttgaaggcgg gcgggggaaa ggctatataa tcccgaatac ttgaccacag cttctgtttg
     7981 aaatcatgtt ttatctgtat caatccaacc gtcttgaaac gctggcggca ctgtttgccc
     8041 gcattcaaaa agtcaaaccg ctgaaatcgg ttttacagcc cgaacagatt attgtgcaga
     8101 gtcaggggat gcgccgctac ctcaatacct gcctcgcccg cgatttgggc gtggcggcga
     8161 atttgtcgtt cagcctgccc gccggtctga cgtggaagct gatgaaaaaa ctgattcccg
     8221 gtattccgga actcagcccg tttgcgcctg aagtgatgcg ctggcggctg ttggatttgt
     8281 tccgcagcga ggcatttcgg aatacggcag aatttgaaga tgtgaggaat gtgctgcaag
     8341 actatctagg cagcggcgaa tcggcagatt atcagcttgc gggacagctt gcggacatat
     8401 tcgaccaata ccttgtctat cgtccgcagt ggatagacgc gtggcagcag ggcaggatac
     8461 tcagtttggg cgacgatgaa atctggcagt ccaaactgtg gcgttatctt gatgacggca
     8521 ggcagagcgc gccgcaccgt gtcgcgttgt gggaaaagct gcttgccgcg ttggacaagg
     8581 ataagctgcc cgagcgttat ttcgtgttcg gcatttccac gatggcgccg atgtatcttc
     8641 agcttttgca caagctgtcc gaacattgcg atgtgttcgt gttcgcactc aatccgagcg
     8701 ggatgtattg gggcaacgtc atcgaagcgg cgcaaatcct caaaggcggc ggcgatcccg
     8761 atttaactca ggcagggcat ccgctgctcg cctcattggg caagcagggg cgcgactttt
     8821 tcgacttttt gaacgaaatg gaaatagaag gagaaacgcc ggtatttgaa gaaggcgggc
     8881 gcgatacgct tttgcacgcc ctgcaaaccg atattcaaaa cctgaaaatg ccgtctgaaa
     8941 atgtgggaag cgtcaacacg ggcgacggct cgatacgcat cgtctccgca cacagcccct
     9001 tgcgcgaatt gcagatactc aaagacaagc tgttgaaaat tctgcatgaa catcccgatt
     9061 ggcagccgca tgatatcgcc gtattaaccc cgcacatcga atcctatacg ccttttatcg
     9121 aagccgtgtt cggacaggcg cagcccggtg cgcaggcatt gccgtattcc gtttcagacg
     9181 tgaaaatcag ccgccgacaa ccgctgtttc atgctttgtc atgcctgttc gacttgttgg
     9241 aaagccgatt tgaagtcgat aaagtgcttg tgcttttaga aaccgcaccc gtgttgcgcc
     9301 gtttcggact gactgaggac gatttgccgc ttttgcacga tatggttgcc gatttgaacg
     9361 ttcactgggg tttggacgga gaaatgcgcg gcggcacgga tcagctgttt acctggaagc
     9421 aggcggtaga acgcatgata ttgggctgga tgctgcccga aggcggcaac ccgatgtggc
     9481 aggatgtcag cgcgtggtat gccgacgtga accaaaccgc cctgttcgga cgttttgccg
     9541 ccctcctcga aaccctgtcg gatattgtac ggatatggcg gcagcccgca acgatcggcg
     9601 aatgggtggc gcgttgccgg gatttgcttg aaacattgtt ccaagctgaa gccgatgacc
     9661 aaaagtcagt ccaaaacctt gaaaacgaat gggtcaaatg gcaggcggaa acagaattgg
     9721 cgcaattttc cggacagttg ccgcaacaaa ccgtcatccg ccatatccga cgtttcctcg
     9781 acagcgaaag cgaggcaggc tttttacgcg gcggcatcac cttttgcagt atggtgccga
     9841 tgcggagcct gccgttcaaa gtcatctgcc tgttgggttt gaacgacgga gattttcccc
     9901 gcaataccaa agccgccgta ttcgacctga ttgccaaaca tcccgccaaa ggcgaccgcg
     9961 cccgccgcga tgacgaccgc tacctcttcc tcgaagccct catcagcgcg cgcgaaatcc
    10021 tctacctgtc ctacatcggg cgcgacatcc gcaaagacga agagcttgct ccgtcttcgc
    10081 tgttgggcga actcatcgac acagttgccg ctatggcggg catcggtagc cgccaacttg
    10141 cacaaaactg gatagaacag catccgctgc aagccttctc gcgccgatat tttcaagaag
    10201 gcggacgttc agacggcata ttcggcacgc gtaccgacta cgccactgcg ctcggacaaa
    10261 cgcccgaacc gccgcaaccc tttttcgacc aacccgtaga aaacgccgaa cctgttgccg
    10321 aaatcggaca ggacgaattt atccgtttct ggcgcaaccc cgtcaaagta tggcttcagc
    10381 agcagcttgc gtggagcgaa ccccatatcg gcgaagcctg ggagcctgcc gaacccttcg
    10441 agccgcaaca cgccgatcaa atcgccgaaa cctacatcga agcacggcgc gaaggacggg
    10501 attttgccca aaccgccgcc cgcatcgggg cggaaagcct cctgccgtcg ggagagttgg
    10561 gcagactttg gcagcagaac ttccaaactg ctgccaaaca aatcgacacg gcggttttaa
    10621 acagccccaa actgccaccg ctttcatatg ccataccgtc ggacgggcaa atcctgaaag
    10681 gcagcttggg caatctgtac cgctgcggac aagtgtttta cgcctacggc aaacccaacg
    10741 cgccgcaacg tatcgctttt ctgctggaac acctgatatt ttgcgccgtt atgccgtctg
    10801 aagccgaaac gcggcaaacc tttatcgtcc aatccggaga aaccgaaata ttggcggaaa
    10861 tcgcgcaaga cagggcattg cagctattgt cggaatggat ggcgtttttc aatatcgggc
    10921 aaaaccgccc gctgccgttt tttgccaaga cctcgcttgc cgctgccgaa gcgtttgccc
    10981 aaaaacaaga ttgggaagcc gccctgaaaa aagcccaaac cgcctattac ggcaacaaag
    11041 tcagcaaagg gcagaaagac tataccgaag tcgccctcgt gttcggcaac gcaagccaaa
    11101 acccactcga acaacccctg tttgaaaacc tcgcccgcct gcttgccgac acgcttgccg
    11161 cagcggaaaa aagggaaggg gccggagcag cctgacggga tggaaaggca aatgccgtct
    11221 gaaaacagca aaaaggtttt cagacggcat tttgtttatc gtgtttaagg tgcgggatag
    11281 aatgtgggcg cgccgggacc gacgggcagt cccaaaacaa atacccaaat gcagaataag
    11341 gcaatccaag caatcaaaaa gaaggcggaa tacggcaaca tcatagaaat cagcgtcccc
    11401 acgcccgcat cttttttgta tttgatcacc gtcgccataa tcagcccgaa ataacccatc
    11461 atcggcgtaa taatattggt aacggaatca ccgatgcggt aagcggcttg aatgacttcg
    11521 ggcgcgtagc cggccaacat cagcataggg acaaaaatcg gtgcggttac cgcccattgc
    11581 gcggaagcgg agcctatcat cagattgata aaggcacaaa ttaaaataaa accgacaaac
    11641 aacacgctac cgcccaggcc gacttctttt aagaacaccg cccctttaac ggcaatatat
    11701 tgcccgatat tcgtccaatt aaaaaatgcg acaaactgtg cggcaaaaaa gatgatgacc
    11761 aaataaagtc ccaaagtact catcgattcg gccatcgcat taacgacttc ccgttcgccg
    11821 cgcaaacttc gggttatctg tccataaaca atgcccggta gcgcaaacaa caagaaaata
    11881 aaaacaacaa tcgatttgaa aaacggcgaa ccggcaacca atcctgtttc aggatgacgc
    11941 aaaatgccgt cggcagggac gatgctccaa gccaataagg cggataaagc aacaaacacc
    12001 gcgcctgccc aaatcaatcc tttatattcc aaaggcgtga tttcattgga atgccgaaag
    12061 tctttttctt cttgtgacaa atctgactga taaaggccca attgcggttc gacgattttt
    12121 tcagtaacaa aataaccgat caaagcaatc acaaacgtac tgaccgccat aaaaaaccaa
    12181 ttggcttcag ggcctacggc gtagtcggga tggatgattt gcgccgcctg ttgggtgatg
    12241 cctgccaaga tcggatcgag cgtgcctaag aacaaattgg ccgaataacc gcccgaaacg
    12301 ccggcgaaag ccgcagccag gccggcgagc ggatggcggc cgagggaatg aaagatgatg
    12361 gcggacaaag ggattaggac gacatagccc aattcagaag cggtattaga taaaatccct
    12421 gtaaaaacaa ccataaaagt agtgagtttg cgtggagatt ttgtgagcaa taagcgcatt
    12481 aatgcggaaa tcaagcccga tttttccgca atccccacgc ccaataaaga aaccaacacc
    12541 gttcccaacg gcgcgaaacc ggtgaaattt ttaacggtat gcgtcaggat tttgatcaaa
    12601 ccgtcagcat cgagcaggct gacaacgtga atcaaaccgt catcggcacg tcctttcgca
    12661 ccaacagggc gcggatcggg gacggatagt tcgaaatacg caccggcggc agaggcaatc
    12721 agcaataaca caatgaaaat aataaaaagc gtaaccgggt gcggcaacat attgcccagc
    12781 cattcgactg tgcgtaaaaa tcgtccgtcc cgttgcgtat cggtttgact catctgcttc
    12841 tccttaaaaa aaatatattg agtgcattaa atttttgaat gtaacatgaa gtgttttgta
    12901 agcaaactaa aataatcgta tatgtatata accgtaatag attaaaacag aaaatgccca
    12961 catcgttatt ctcataaagg cggtaatccg aaaacttgac gttaaagcct tatcaggaat
    13021 gactggaact caaaaaaacg gattcccgcc tgcgcgggaa tgacgggatt ttcggttttt
    13081 gtttgcaaga atgccggaga agaatgcagt ttacattttg aatggtattg ttattaattg
    13141 taaataaata ttggaaggta aatgatatga aaaatgaaat tcaaaaaatc atggacaaat
    13201 ataatccatg gcatgaagat gattttgagt cgtatgaaga cattgccaga gatgtatcgc
    13261 tgacgacaga taaaacgttc attgaacatt atttgttaga agtttattca gaagaaaacg
    13321 gacattttga ccaagagaat gtccatgcaa tgatagaaga aattaaaaat gcaatttagt
    13381 gaa
//
LOCUS       DAWEYF010000040        13232 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.040, whole genome shotgun sequence.
ACCESSION   DAWEYF010000040 DAWEYF010000000
VERSION     DAWEYF010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.040"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            142..309
                     /locus_tag="WGN93_000832"
     CDS             142..309
                     /locus_tag="WGN93_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226759.1"
                     /translation="MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYTQNIDFSQW
                     VKSIIKEKIKK"
     gene            582..767
                     /locus_tag="WGN93_000833"
     CDS             582..767
                     /locus_tag="WGN93_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226760.1"
                     /translation="MPDEKTLKAKQAEYQRKYDQKRLMKTVSFHLEREKELVDFMQKE
                     IPDFSNWVKSVMKEKMK"
     gene            968..1168
                     /locus_tag="WGN93_000834"
     CDS             968..1168
                     /locus_tag="WGN93_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226761.1"
                     /translation="MDSIKKAQEKYALKRVVKTVSFNSEKELDLIKFSENLDFSNWVK
                     SKIRGDMESEKFKKKAKKNIDK"
     gene            1300..1908
                     /locus_tag="WGN93_000835"
     CDS             1300..1908
                     /locus_tag="WGN93_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HEZ0226762.1"
                     /translation="MKDNFTMNTQLIPTVSGQLDNQTQALVDAHDLHKFLGVETPFSK
                     WIQRRIEEYGFTQALDFIGVDKIVRTEAGFFGQRDKTVQGYYLSLDMAKELCMVERND
                     KGRQARRYFIEMEKQAKALPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIG
                     KLLDMNPGAVSYRLKKLNDLGFLEYVPKPKMVVQQQSLGLEG"
     gene            1912..2127
                     /locus_tag="WGN93_000836"
     CDS             1912..2127
                     /locus_tag="WGN93_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226763.1"
                     /translation="MNTTYTLTFDQDSLKALNLLVFTLNHLKVLEMDMEGIEDGLSAV
                     IETASEKADKLSAAFYNAVYEQEEKAA"
     gene            complement(2288..2806)
                     /locus_tag="WGN93_000837"
     CDS             complement(2288..2806)
                     /locus_tag="WGN93_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEZ0226764.1"
                     /translation="MAKTRIKQPAIEAAQDKAEVTAFIRKIGDLQREVKRLETEAGDK
                     KAAIEEEYAAKAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDAILNQKERFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
     gene            complement(2831..3319)
                     /locus_tag="WGN93_000838"
     CDS             complement(2831..3319)
                     /locus_tag="WGN93_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226765.1"
                     /translation="MKELPTQLHNAMIDGLTMLLTLRLSGSPAADTVAATAQTWSRVL
                     AHGRAWDEARDVPRFQTAFMVLANEMSRWPSPKDFLDKIPPPPEPLKLEHHYHPTAEE
                     KAKGKSALNRIQGVIKEVLKGKSLIPPPAETATGQILRNRAKVEALAKREREQGLSKP
                     KC"
     gene            complement(3316..3801)
                     /locus_tag="WGN93_000839"
     CDS             complement(3316..3801)
                     /locus_tag="WGN93_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226766.1"
                     /translation="MNVKCPNCGAVHSLDSLINDAEASAVLKAVLEMDVELGKAAIRY
                     IGLFRPAKSRLSWARTAKLLNELLPMIKAQEATRDGVCFHAPAEAWIHGFNETVNARD
                     QGRLKTPLKSHGYLYEILAGRVGQPSAGNQTNQPNRRAALPANPSQTLTAAASLQGLK
                     K"
     gene            complement(3798..3998)
                     /locus_tag="WGN93_000840"
     CDS             complement(3798..3998)
                     /locus_tag="WGN93_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226767.1"
                     /translation="MMFKLIYFGVVFVLGLGMTLVCVANFLKGRCSRKSEILGALVIV
                     FGSVATWLATWLSMMVLSGVIK"
     gene            complement(3995..4162)
                     /locus_tag="WGN93_000841"
     CDS             complement(3995..4162)
                     /locus_tag="WGN93_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226768.1"
                     /translation="MNAKEIAEWLEDRGELMVMKKDGEGFVIAARAPDGIWKTAEAET
                     LAQAITLWEDL"
     gene            complement(4361..4516)
                     /locus_tag="WGN93_000842"
     CDS             complement(4361..4516)
                     /locus_tag="WGN93_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226769.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATARVAQKNREREIEEYQARFRRPA
                     EKKEEKK"
     gene            complement(4622..4861)
                     /locus_tag="WGN93_000843"
     CDS             complement(4622..4861)
                     /locus_tag="WGN93_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226770.1"
                     /translation="MYHLFCERKTKWIGLAFWLLFWAVLVGTMLHSCSKPKVSAAKLE
                     MSRRELLADLEAKARVEQYEAMSVEEKMKGIVYER"
     gene            complement(5128..6042)
                     /locus_tag="WGN93_000844"
     CDS             complement(5128..6042)
                     /locus_tag="WGN93_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ0226771.1"
                     /translation="MKQINQALQQKLAEFKAKSGMNQTQLARGIGTSPASVSMYLNGT
                     YADKGGNYETIEPKIEAFLEMQDSKARREELVLGFVSTKTTRRIAEVMRDAHEAGEIA
                     VIYGQAGLGKTQAVKNYCEKNPAAILIEANPSFTALVLMRKLAAAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSIPLNLGDSMPDEELFEIAKAALPDADKETLLELVKHSNGNTRRMSKLM
                     RGAVRTANKNGIKIQAGIVKKYSSLIIR"
     gene            6088..6345
                     /locus_tag="WGN93_000845"
     CDS             6088..6345
                     /locus_tag="WGN93_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ0226772.1"
                     /translation="MKEFPDLEKRLIMLEVAVQDLEDRSLADSLVLAWLLQRITRQEP
                     TSIGQVRRFLQAQAKTFEPDSVQREHLESLLEIVESAQEPA"
     gene            complement(6412..8388)
                     /locus_tag="WGN93_000846"
     CDS             complement(6412..8388)
                     /locus_tag="WGN93_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0226773.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYQYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRTAKVG
                     ERTLDGWISAYLKAEDATERLVALAPKTTKTVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHYGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYETFAGSGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPSWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDGIAPDMLSA
                     EELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRVSYDLSDASAVNVFDMD
                     GKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQAAVW
                     DELGHLGGNVIEAEYAVLPKTGTDDGIFLFEADM"
     gene            complement(8390..8641)
                     /locus_tag="WGN93_000847"
     CDS             complement(8390..8641)
                     /locus_tag="WGN93_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0226774.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            8689..9588
                     /locus_tag="WGN93_000848"
     CDS             8689..9588
                     /locus_tag="WGN93_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEZ0226775.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCDVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            9750..9962
                     /locus_tag="WGN93_000849"
     CDS             9750..9962
                     /locus_tag="WGN93_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0226776.1"
                     /translation="MNHAETEPRDGLYVLRIGNDLFVKRVQRIPGKLLVTSENPRYAP
                     FEIDLSNTQDDIAIIGRVEWYGRSID"
     gene            10184..10762
                     /locus_tag="WGN93_000850"
     CDS             10184..10762
                     /locus_tag="WGN93_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEZ0226777.1"
                     /translation="MFRHNGEVLLDGINIKLKSGDSLLIRGPSGCGKTSLLRALAGLW
                     PFGSSGKVSRPPHQDILFLPQRPYTAQGSLRDAVCYPDIDKQHPELAEAMNTCRLGYL
                     IDKLDKTDDWQHKLSPGELQRVAFVRALLSKPKIVLLDEATAALDEPTEALLYRALKQ
                     KLPDSIIISIGHRSTLNAFHNMHLDVGNVACG"
     gene            10867..11535
                     /gene="hda"
                     /locus_tag="WGN93_000851"
     CDS             10867..11535
                     /gene="hda"
                     /locus_tag="WGN93_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ0226778.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            11532..12200
                     /locus_tag="WGN93_000852"
     CDS             11532..12200
                     /locus_tag="WGN93_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ0226779.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLETGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLQSYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            12556..12663
                     /locus_tag="WGN93_000853"
                     /pseudo
     CDS             12556..12663
                     /locus_tag="WGN93_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         3458 a         3572 c         2781 g         3421 t
ORIGIN      
        1 ctattcaaat tctcatcttg gtcgcagttt tcatgttggc aagtgctaat gcctactaaa
       61 gactgaccag ctgggggcgg tcgccgctgt ccccagtccc aatcttacaa aatacggttt
      121 aaaaaatcaa ggagtttgcc tatggttgat gaaaaactgg cagaaaaccg aaagcgttac
      181 gagcagaaac gggtgattaa gaaagtctcg ttcaatgccg aaacggaaaa agaacttttg
      241 gaatataccc aaaatatcga tttttcccaa tgggttaaat caatcatcaa agaaaaaatc
      301 aaaaaatagc ttgactaaat tctagaaata ctagataata cgcctatctg ataaagcaaa
      361 gccccgaagc ggcaacttcg ggggcttatc ggatagaaag gaggcttgtg gaaatgacaa
      421 aactggcgaa agttgttttt ttcatcattc tgcttttaag ctgtagtccg gcttactaag
      481 caagttgatt aaacacaagg ggtggcagaa caccgcgccc ctttcgccaa cctttctgca
      541 agccatttta ctacaacgat tttaaaaatc aaggattgcc tatgcctgat gaaaaaacgc
      601 taaaagcaaa acaagctgaa tatcagcgaa agtatgacca aaagcggctg atgaaaacag
      661 tttctttcca tttggaaaga gagaaagagt tggtggattt tatgcaaaaa gaaattcccg
      721 acttttcaaa ctgggttaaa tcagtcatga aggaaaaaat gaaataagaa aattccgccg
      781 atgggaaaac atcggcggaa caggtggaaa gcagagcagc aactctcttt atgtagggca
      841 tgaaaaaagg ccgtctgaaa caggttttaa accccatttc agacggcttt ttgttgtaat
      901 acatcttgat taaaatggtt tttagtatta ccataatcgt gttttaaaac ctatttaaag
      961 gaagattatg gactcgatta aaaaggctca agaaaaatac gcactcaagc gagtagtgaa
     1021 aacagtatcg ttcaattccg aaaaagaact tgatttaatt aaattttctg aaaatttaga
     1081 tttttcaaac tgggtaaaat cgaaaattag aggagatatg gaatcggaaa aattcaaaaa
     1141 aaaagcaaaa aagaatattg acaaatagaa ttaccataat ttaaaatttc catatcttgt
     1201 gcaacacaag atatggaaat ccccgataag tgacagctta tcggggatag tggaaaagca
     1261 acgttagagc gttcttttcc ttgtcatctc aaccttgaaa tgaaagataa ttttaccatg
     1321 aatacccaac tcatcccaac tgtttcaggt caattggaca atcaaacaca agcactggtt
     1381 gatgctcatg acctgcataa gttcttaggt gtggaaacac cattttctaa atggattcag
     1441 cgtcgcattg aagaatacgg atttacacaa gcccttgatt ttatcggcgt ggacaaaatt
     1501 gtccgcaccg aagcaggttt ctttggacag cgtgataaaa ctgttcaggg gtattattta
     1561 tccctcgaca tggcaaaaga gctgtgcatg gtggagcgca acgacaaagg acgccaagcc
     1621 cgccgatatt ttatcgaaat ggagaaacag gcaaaagccc tgcctgatgc cgtgctatac
     1681 cgcatcgatg cattggaaga cgcctatttc caagccgcgc ccgaaatgct cgcgctgctg
     1741 cgctaccgca gtatgggctt gaacctgacc gaaataggca aactcttgga catgaacccc
     1801 ggcgcggttt cctaccgtct caaaaaactc aacgatttgg gtttcttgga atatgtcccc
     1861 aagcccaaaa tggtggtgca acaacagtct ttgggattgg agggttaagc catgaatacc
     1921 acctataccc tgactttcga ccaagacagc ctcaaagccc tgaatctgct ggtgttcaca
     1981 ctcaaccatc tgaaagtttt ggagatggac atggaaggaa tcgaagacgg tttgtctgcc
     2041 gtgattgaaa ccgcctccga gaaagccgac aagctgtccg ccgctttcta caacgccgtg
     2101 tacgagcagg aagagaaagc agcctgaatc tagggcatga aaaaaggccg tctgaaacag
     2161 gttttaaacc ccgtttcaga cgacctttaa atcatgggtt aaagcctatt tgaaccggct
     2221 aggcaagctc ctgctccgta ggctcaatca cgtttcaaca cactgaattg aaatcaggct
     2281 gttgatttta tagaatttgt tcgctcggct caatcacaaa atcctccacg ccgctcacaa
     2341 tcttaatccc cggcacttgg ccgtctgaaa aacgctcttt ttgattcagg atggcgtctt
     2401 tgtcgatttc ctttttagtg cggacaaact cggcaaaggc ggatttttcc gagagccacg
     2461 ccaagacggc ggccacgccc gttaccttga cggatggcgg acggatgcgc catttaatca
     2521 ggccggtggt aaagtccacg gttttggttt taccgttttc cgtcagctcg tccttatgtg
     2581 cctcgcagta tgcggccaca cgttcggtca ggctcatgat ttcggcacac atcggcgcgg
     2641 ctttggcggc atattcttct tcgatggccg cttttttgtc tccggcttcg gtttccaggc
     2701 gtttgacttc gcgttgcaaa tcgccgattt tgcggataaa cgcagtaact tccgctttgt
     2761 cttgtgccgc ttcgatagcg ggttgtttga ttcgggtttt agccattttc tctttccttt
     2821 caggttgggt ttaacatttc ggcttgctca agccttgttc gcgttcgcgc ttggcaagtg
     2881 cctcaacttt cgcgcggttt ctcaaaatct gcccggtggc ggtttcagcc ggaggcggta
     2941 tcagcgactt gccttttaat acctctttaa ttacgccctg tatgcggttt aaagccgatt
     3001 tccccttcgc tttttcctct gccgtagggt ggtagtggtg ttccagcttc aacggctccg
     3061 gtggcggcgg aatcttgtct aaaaaatctt tcggactcgg ccagcggctc atttcattgg
     3121 ccaataccat aaaggccgtc tgaaagcgcg gtacatctcg cgcttcgtcc cacgcccggc
     3181 cgtgcgccaa tacacggctc catgtttgcg cagtggcggc cacagtgtcg gcagccggcg
     3241 aaccgctcag acgcagggtc aaaagcatgg tcaggccgtc aatcatggcg ttatgcagtt
     3301 gggtaggcag ttctttcatt ttttcagtcc ttgcagcgag gcggctgcgg tcagggtttg
     3361 gctgggattg gccggcaggg cggcgcggcg gttgggttgg tttgtctgat tccctgcgct
     3421 tggctggccg acccggcctg caaggatttc atacagatag ccgtgcgact tcagcggcgt
     3481 tttcagacgg ccttggtcgc gtgcgttaac ggtttcgtta aatccgtgaa tccaagcctc
     3541 ggcaggggca tggaaacaaa ccccgtcgcg tgtcgcctcc tgcgccttaa tcatcggcag
     3601 caactcattc agcagtttcg cggtacgcgc ccaagagagc cgggacttgg cagggcggaa
     3661 taaaccgata taccgtatcg ccgccttgcc caattccaca tccatctcca acacagcctt
     3721 taataccgcc gaagcctccg catcattgat taagctgtcc aggctatgca ccgcaccaca
     3781 gttcgggcat ttcacgttca tttgattact ccggacaaca ccatcatcga caaccatgtg
     3841 gccaaccatg tggccaccga accgaaaaca atcaccagtg cgcccaatat ctccgatttc
     3901 cgcgaacagc gacccttgag gaagttcgcc acacaaacca aagtcatacc aagacccaac
     3961 acaaacacca caccgaaata aatcaactta aacatcacaa atcctcccat aaagttatcg
     4021 cctgagccaa agtttccgcc tccgccgttt tccagattcc atccggcgca cgcgcggcaa
     4081 tcacaaagcc ttcgccgtct tttttcatga ccatcagctc gccacggtct tcgagccatt
     4141 ctgcaatttc ttttgcattc attttcaaat tccttttaaa tcaatatctt atattttcaa
     4201 caaggcaaaa aaatatagag caacatcaac gtcttaccgt tttaattgtc gtcatacccg
     4261 tcatggcctt caccgatcat gtgcaacacg aggattcggg ccggcagttc aagccaaatc
     4321 cccagcacca caaacaccgc caatccgaca acaaaccaaa tcattttttc tcctccttct
     4381 tctcggcagg ccgtctgaaa cgcgcctgat attcctcgat ttcgcgctct ctgttttttt
     4441 gcgccactcg cgccgtcgca cgcctgcggt gttgtcccca agcctgccaa tccgtattgc
     4501 gtcgtccgaa actcatttca cacctccttt cacaatcgcc ttatcgccat atttcgcgcg
     4561 gatttccttt accgcccgat ccaaagcctc ttgtttcgcc gcagggttca ataaaatcgg
     4621 cttatcgctc ataaacaatc cctttcattt tttcctcgac gctcatcgcc tcgtattgct
     4681 cgacccgggc ttttgcctcc aaatccgcca gaagctcgcg gcgcgacatt tccaactttg
     4741 ccgccgacac cttgggctta gagcagctgt gcagcatcgt gcctaccaaa accgcccaaa
     4801 acaacaacca aaaagccaaa ccgatccact tggtttttcg ttcgcaaaac aaatgataca
     4861 ttttcctatt tccttataaa tcaattactt aatattttct taaggcaaaa aaattattgc
     4921 gcacccaatc cgccctaacc ggcgcgcccc cttcgctccc tctccctgtg ggagagggct
     4981 gggggagagg gcaactcctt ctttgcgctt gccgcgtaca tcggcccgcc aaattttccg
     5041 ccgtttatgg gtttcataat cgtgccaagt gtcctcatag actccggcgt gtaccgcata
     5101 ttcgtgtctc atttcagacg gcctttctta tcggataatc agggagctgt atttcttaac
     5161 gataccggcc tgtatcttga tgccgttctt gttcgccgtg cgtaccgcgc cgcgcatcaa
     5221 tttgctcatc cggcgcgtat tgccgttact gtgtttcacc agttccaaga gcgtctcctt
     5281 gtccgcatca ggcaaagccg ctttcgcaat ctcaaagagt tcctcgtccg gcatcgaatc
     5341 tcccaaattc agcggaatcg acacgcggct gtaaagctgt accagctcgc catgcttacc
     5401 ccgcaaattc gccaccagtc ggggcatacc gctcaacacc aaaccgcagc ccgtctcgtc
     5461 gtgcagtcgg cggataatct caagggcgcg caagggcagg ttttccgctt catcgaccac
     5521 aatcagacgg cccgaatcgc gcaggcggtc agataccgat tcaaacaaat cattcaggct
     5581 gcccatcgcc gataccttcg ccgctgctgc cagcttgcgc atcagcacaa gtgccgtaaa
     5641 gctcggattg gcctcaatca ggatggcggc agggtttttc tcgcagtagt ttttgaccgc
     5701 ctgcgtcttg cccaagcctg cctgaccgta aatgacggca atctcgccag cctcatgcgc
     5761 atcgcgcatc acttccgcaa tacggcgtgt cgtcttggtc gatacaaacc ccaacaccaa
     5821 ctcttcgcgt cgcgccttac tgtcctgcat ctccaaaaac gcctcgattt tcggctcgat
     5881 ggtttcataa ttgccgcctt tatcggcata agtgccattc agatacatac tgacggatgc
     5941 cggcgaagta ccgataccgc gtgccagttg ggtttggttc atgcctgatt tggctttaaa
     6001 ttcagccagt ttttgttgca atgcttgatt gatttgtttc atttttaata tccttgagtt
     6061 ttaaacaacc tttaaaggcc gtctgaaatg aaagagtttc ccgatttgga aaaacgcctg
     6121 attatgctgg aagtcgccgt tcaagacttg gaagacaggt cgcttgccga ttccctcgta
     6181 cttgcctggc tgcttcagcg gattacccgt caagagccga cttcgattgg gcaggttcgc
     6241 cgcttccttc aagcgcaggc aaaaacgttt gagcctgatt ccgtccagcg ggaacacctt
     6301 gaatctttgc ttgaaatcgt tgaatccgcc caagagcccg cttgagtttc aatttttcaa
     6361 caagctcggc cgaaaacgcc gcatttttct gtttttccat catgttttcc tttacatatc
     6421 cgcctcaaac aagaaaatcc cgtcgtccgt acccgttttc ggcaataccg catactccgc
     6481 ctcgatgacg tttccgccca aatgtcccag ctcgtcccaa accgcagcct gttccaaagc
     6541 cggattgact tccgcattcg cgagcttgat tgcgttttcc gcccgcttga ttttgccttt
     6601 tcggcgtttt tccgccagtt ggtcgatacg tgctgtcggg aaagcctcgc gtgtattgcc
     6661 gttggcctgc gccttagtga taaacttgcc gtccatatca aacacattga ccgccgacgc
     6721 atcgctcaaa tcgtagctga cccgtacctc gtctttgtga tactccgcca gctcggttga
     6781 gaaataagag ttgttgaata aatccagcca accgcgctgt acctttcgca cctcttgcgg
     6841 cataaacatc gtcgccagct cttccgccga caacatatcc ggcgcaatcc cgtcctgttc
     6901 cagcctcatt tcccgataag ccttcggcga ataatgcccg ccgtccggat gtcggggcag
     6961 ctcgccgtgc gggcggttgt tgtattcatc gatacacttg accacatccg cgataaaacg
     7021 cgaccagctc ggcagttttt tcaaatattt ctgttgttcc tccgtcaaat ccttgccttt
     7081 ttccaaagca ttaaaagcac tttccatctt gcggtacatc aggttcttcg tgctgctgtc
     7141 catcccgctg cccgcaaacg tctcatactg ccgcgccatc tcaatcagat tgtctttcca
     7201 ccatcgctcg atgatgccgc gcccttgcgg gttgcccgcg atacccgttt catgccggat
     7261 acccagtcgg gacgtgatac ccgtgatttc atggtctatc gtcttgccgg tttgaccgcc
     7321 gccgttatcc gagtaataaa taatcggcaa accatagtgc ttgaccccga tacgcagagc
     7381 gtccgacact gctacgcaac tttcagccag cgacaccgaa aatcccacca caaaccgcgt
     7441 acatccgtcg ataatcaccg tcacttccgg cttaaacggc ctgccgtgta ccggatgcgc
     7501 caccttcgcc ttaaagctat ggccgtcgcc gatccaaaca tcgttcggct ttaaagcccc
     7561 ccaatcacgt ttcacataag gcagcagcga tttataagcc gcccccgttt tcctgccgcg
     7621 ctcctgcata atcagcggca gcttgtccca aacgcgccgc accatactca aattaggcac
     7681 atcattgacc ggcatatttt ccgcttccgc ccactgcaca aaccggcggt agctgtgtgc
     7741 cagtttcggc gcggacggga tattgtgaaa ctgcataaac atcggcaacc aaccgtagct
     7801 ctcaatcggc ttgactgtct tcgtcgtctt cggagccaaa gcaaccaacc gctccgtcgc
     7861 gtcttccgct ttcaaataag cagaaatcca gccgtctaaa gtacgttcgc caacctttgc
     7921 cgtccggctg cggtcattgg ccttttccaa gttcccaagc gtgaccgcgt ccaatttacc
     7981 ttctgccagc aagcccaaaa actgagccac cgcagccttg gcagagcaat cgtattggta
     8041 tttaatcccc aacaccgccg ccaccaccgc acatcgcgca tccgccaccg accgttgttt
     8101 ctcgttcaac agcttggccg cttcagccag tgcttgagcc gacatcgccg tccccggtct
     8161 gacttggggc agggttttcg gcatcttctc cgccagctcg tccgactgcc gtttcatgat
     8221 ggctgctcgg atttcggcag ggagggcata ttcaacacca ccacccttac cttgacgcct
     8281 tctcgtttgc caaccatccc tttgcgcttt ttttctcagc cctattactg ttcttggcat
     8341 atttggcaac ccaaaattaa gcaggctttt gagatccata tattccattt caacccactc
     8401 cgagcatctc tttcaattca gctatctttt tgtctcgaca atctgttttc ttgtaatgcg
     8461 gaaaaacttc aactaaatct ttttgaatca ctttcgcgat tgcttccgca attcttttgc
     8521 ttcctcgtcc atttcttatg acctcagaaa cagattggtt agttacccct aaagccgaag
     8581 ccaacattct tgccgatata tttttttctt ctaaggattt atagatttcg ttcgcttgca
     8641 taatgcctcc atgatagaat ccattactta cttaccttac aggctttaat gcctgcctta
     8701 actgttactt ggatgatata cacaaaatat ttggtatacc aaatatattt ggtaatattt
     8761 tgcgatgttt ttatggaacg cattgattta gcattgaatt tagttgaaga gagaagccga
     8821 cttggatact ctcgaaagaa ttttgctgag caaactggat gcagtgcaga aagtttgaga
     8881 ctgtatgaaa gcgggcaggt caacattcct gcggactttt tacttgctgc tgtccaatta
     8941 ggggtggata ttcaatttgt ctttacaggc attcattcgg caaatttaaa tgctgtttca
     9001 gacgacctta ataaaaaatt ggacgacgct attggcaaat caaacgttga gaatcagatt
     9061 aacggcaacg tcagtaacgc tgttatcgcc tcatctggtt cggttgttca tcaaattaat
     9121 acccaaaatc acgtcatcag aacccgtgtc gattcaaaac ccggcaagga acatataacg
     9181 cttgagcaag cttcaaagct gcaacaactt gttaaacaag ttgccgcagc agaagagatt
     9241 gccaaacggt cgccaaaatc aatccgtgca atttgggcta gtctgaatgc tcactgtaaa
     9301 gttccaagtt acaaactaat cgcattgagc gattacgaca aagcagaaac ttatctcaga
     9361 aaatggctgg gtaggttgag caatacagca acatcaaaga acaacgatcc cgactggcga
     9421 aaaaagaaat acgcttatat caaattaaat gtaaaacagc ttgagcttga agattggttg
     9481 aaaagttacc tcgaaaaaaa tttctcagta gaaagcctga ctgaattaag tgatgaagat
     9541 ttgcaaaaaa catatgcagc agtatcgact aaaaaacgga aaaaataggc ttaaacatga
     9601 aactccgcct ttaaattcaa gtttcatgtt tagcttatgg tcttcagatg cttttttaga
     9661 tgtatgatat taaaagattt tttcaaacat ggaactatta tacaagttcc atgttcagtt
     9721 tctagttaaa gccttttata aacattctaa tcaaccacgc cgaaaccgag ccgcgcgacg
     9781 gcctatatgt cttgcgtata ggcaatgacc tctttgtcaa acgtgtgcaa cgtataccgg
     9841 gcaaactgct tgtaacgtct gaaaatccac gttacgcacc gtttgaaata gatttgagta
     9901 atacccaaga cgacatcgcc atcataggcc gtgttgagtg gtatggccgg agtattgatt
     9961 aaatccattt taaaaacctc ttaaaacagt tttaaaaatt ccctaatctc gtcagcttta
    10021 aacagaaaac cgcgcattcc ggcgcggttt tgtgaaaaag ctggcgtaac ttttccggat
    10081 acaaaaaaac gccgaaatcc acgtcttccg aagatttcag cgttttttta ctctatttgt
    10141 tccttgtgca aaaactaaca gtcccccaca ggaaaacgtc gccctgttcc gccacaacgg
    10201 cgaagtttta ttggacggca tcaacatcaa actcaaaagc ggcgattcgc tgctgatacg
    10261 cggcccgagc ggttgcggca aaacctcgct gctgcgcgcg ctggctgggc tttggccgtt
    10321 cggcagcagc ggcaaagtca gccgtccgcc gcatcaagac atcctcttcc tgccgcaacg
    10381 cccgtacacg gcacagggca gcctgcgcga cgcggtttgt tatccggaca tcgacaaaca
    10441 gcatcccgag ttagccgaag ccatgaacac ctgccgcttg ggttatctga ttgacaaatt
    10501 ggacaaaaca gacgactggc agcacaaact ctccccgggc gaactgcaac gcgtcgcctt
    10561 cgtccgcgcc ctgctttcca agcccaaaat cgtcctgctc gacgaagcca ccgccgcttt
    10621 ggacgaaccg accgaggccc tgctctaccg cgcactgaaa caaaaactgc ccgacagcat
    10681 catcatcagc atcggccacc gcagcacgct caacgcgttc cacaatatgc acctcgatgt
    10741 cggcaacgtt gcctgcggtt gaacgatgcc gtctgaagcc gttttcagac ggcatttttc
    10801 aaattgataa agcacgcgaa aacaacgtac aataaacccg tttaccaccc ctcggaatgc
    10861 cgaaccgtga accagcttat tttcgacttt gccgcacacg actatccgag tttcgacaaa
    10921 ttcctcggca cggaaaacgc ggaactggtc tatgtcctcc gacacaaaca cggacagttt
    10981 atctatgtct ggggtgaaga aggtgcgggc aaaagccatc ttttgcaggc gtgggtcgca
    11041 caggcgctcg aagccggcaa aaacgccgcc tatatcgatg ccgcctccat gccgctgacc
    11101 gatgccgcgt tcgaggcgga atacctcgcc gtcgatcaag tcgaaaagct gggcaacgaa
    11161 gaacaagccc tgcttttttc catcttcaac cgcttccgca acagcggcaa aggctttttg
    11221 ctgctcggtt cggaatacac gccccagcag ctcgtcatcc gcgaagattt gcggacgcgt
    11281 atggcgtact gcctcgttta cgaagtcaag cccttaaccg accaagaaaa aatcgacgcg
    11341 ctcgccagta tggcggcggc acgccaagta accgtcgatt ccgaaatttt cgaatacctg
    11401 ctcaaacact ggcggcgcga tatggacagc ctgatgatga tgctcgacac gctggacaac
    11461 tacgccgtca caatgggcaa acgcatcacc ctgccgcttt tgcgccagct tttgaaacaa
    11521 caggaaaccc aatgaaaaac ctcgccatct tcgacctcga caacaccctc atcaacaccg
    11581 attccgacca cgcctggccg caatacctca tcaaaaaagg cttggttgac gctgccgaaa
    11641 ccgaagcgca aaacgaaaaa ttctaccgcg actaccaaaa cggctgcctc gacatcgacg
    11701 cattcctcaa attccacctc gccccgctcg ctcgttacag caaagaagag ctggcggaat
    11761 ttcaccgcga atttatggcg gaatacatca tcccccacat ctcgcctatg cagcgtatgc
    11821 tggtgcagag ccaccaaatg gcaggcgacg aaacccttgt gatttcctca accaacgagt
    11881 tcatcatcac ccccgtctgc caccttttcg gcatcaccaa catcatcggc acacaactcg
    11941 aaaccggttc tgacggccgc tacaccggca attacatcgg cacgcccagc ctcaaagaag
    12001 gcaaaatcac ccgcctgaac caatggcttg ccgaacgcgg cgaaacgctc caaagctacg
    12061 gcaaaaccta tttttacagc gactccaaaa acgacttgcc gctgctgcgc cttgtcagcg
    12121 aacccgtcgc cgtcaacccc gatgccgagc tggaaaaaga agccaaagaa aaaggctggc
    12181 cggttttgaa tttcaaatga cgcaatgccg tctgaagccc gattcggcgt tcagacggca
    12241 ttgaggctga aatccaaaaa actcaaagcc acaggaattt atccggaaaa acaaaaaaca
    12301 caggaattca tcgggaaaaa caacaatctt tccaccgtca ttcccacgaa agtgggaatc
    12361 ttgatccgtc cgcacggaaa cttatatttc gtcatttgca cccgacataa ttcaatactt
    12421 tattttgcaa taaattaacg gatgctgaca aattagattg gattaattac cctattatcc
    12481 atattgggtt atcgggttgc taattgagca gagcgtagca aaccataaag tgagtgtttc
    12541 cacccactct gcatttatag tggattaaat ttaaatcagg acaaggcgac aaagccgcag
    12601 acagtacaga tagtacggca aggcgaggca acgctgtact ggtttaaatt taatccacta
    12661 tactatgaag tggttattaa atatgataat gagacctatt aaatttagta tggtaaatac
    12721 gttattattt attgttatat gtagttcatt ttttgatctg ctcgttcaat tatgtacaat
    12781 tttatttcat agccaaaaaa tatactttat tacattattt ttattattta tttttaattt
    12841 tgttacaaaa tctatctata tggcaattat ttatcctatt ttatattttt ttacgataaa
    12901 aaaatattat ccttactcta ggaaagtgat aattctatta ttattagcat tatctatata
    12961 ttttagtttt atggactttt actttttttc catatattca gataacctta gctatgaaac
    13021 ggagccttta catttataca tccctattat tattaatttt ttctcacttt tagtttctaa
    13081 ttttatttta tcttttatca acaagtaaat gtatatacaa aatacaatcc aaaagatcct
    13141 aagcaaacca ccaatcccac accaccctta ccggttcaaa tccgcacaaa aacccacatc
    13201 ccgtcattcc cacgaaagtg ggaatctagg ac
//
LOCUS       DAWEYF010000041        12736 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.041, whole genome shotgun sequence.
ACCESSION   DAWEYF010000041 DAWEYF010000000
VERSION     DAWEYF010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12736
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.041"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            332..1645
                     /locus_tag="WGN93_000854"
     CDS             332..1645
                     /locus_tag="WGN93_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ0226780.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1863..2038
                     /locus_tag="WGN93_000855"
                     /pseudo
     CDS             1863..2038
                     /locus_tag="WGN93_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2034..3284
                     /locus_tag="WGN93_000856"
     CDS             2034..3284
                     /locus_tag="WGN93_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ0226781.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRIFVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEVSADETEIYTLIKTFADNAVRYTPPEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERARVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGHL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(3319..4812)
                     /gene="rng"
                     /locus_tag="WGN93_000857"
     CDS             complement(3319..4812)
                     /gene="rng"
                     /locus_tag="WGN93_000857"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ0226782.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            5026..5283
                     /gene="grxC"
                     /locus_tag="WGN93_000858"
     CDS             5026..5283
                     /gene="grxC"
                     /locus_tag="WGN93_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ0226783.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5304..5747
                     /gene="secB"
                     /locus_tag="WGN93_000859"
     CDS             5304..5747
                     /gene="secB"
                     /locus_tag="WGN93_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ0226784.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5833..7875
                     /gene="recG"
                     /locus_tag="WGN93_000860"
     CDS             5833..7875
                     /gene="recG"
                     /locus_tag="WGN93_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ0226785.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTATETLEQLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFANLEEDLHLLEQAREIAPLLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(8630..9673)
                     /locus_tag="WGN93_000861"
     CDS             complement(8630..9673)
                     /locus_tag="WGN93_000861"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ0226786.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGGIPLLP"
     gene            complement(9670..9951)
                     /locus_tag="WGN93_000862"
                     /pseudo
     CDS             complement(9670..9951)
                     /locus_tag="WGN93_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10204..11358
                     /locus_tag="WGN93_000863"
     CDS             10204..11358
                     /locus_tag="WGN93_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ0226787.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLESASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDPRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTATQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            11587..11940
                     /locus_tag="WGN93_000864"
     CDS             11587..11940
                     /locus_tag="WGN93_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226788.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRNWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            12001..12627
                     /locus_tag="WGN93_000865"
     CDS             12001..12627
                     /locus_tag="WGN93_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HEZ0226789.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
BASE COUNT         2948 a         3129 c         3588 g         3071 t
ORIGIN      
        1 ccgccttgtc ctgatttttg ttaatccact ataaaatccc acgtgtacgg cacgccccgc
       61 gctccgcaat gataggggcg gtttcgtttg aatcggcgta ccgggatgaa tgcccccgcg
      121 ccgtcccgat accggtttgc cggttgttcc gtatcggttg ccgccgtgaa atgacggacg
      181 gatacaggaa tggcggcagg cgtaaatggg aggaaatgac cgattgactt gtttcaaaat
      241 aaaaaagtag aatacaaggc ttatcccgcg tctgtgggcg gttttgcctg cacgggcggt
      301 tttctgttta aaataaaata aaggagaaat gatgctgacg tttatcggac tgctgattat
      361 cggggtcatc gtatggttgc tgctgacgga aaaagtgtcg cccatcatcg cattaatctt
      421 ggtgccgctg tttggggctt tgctggcggg gtttgatgta tcccaattaa aagaatttta
      481 ttcgggcggc accaaatcgg tgatgcagat tgtgattatg tttatgtttt ccattttgtt
      541 ttttggaatc atgaacgatg tggggctgtt ccgtccgatg ataggcggtt tgattaagct
      601 gactcggggt aatatcgtgg cagtgagtgt ggggacggtc ttggtgtcgg tggtggcgca
      661 gttggacggg gcgggtgcga cgacgttttt attggtggtc cccgcccttt tgccgcttta
      721 caagcgtctg catatgaatc cttacctgct gtttttgctg ctgacttcca gtgcgggatt
      781 gattaacctt ctgccgtggg gcgggccgac tgggcgggtt gcaagcgtgt tgggcgcaga
      841 tgtgggcgaa ttgtataaac ctttgttgac ggtgcaaatt atcggtgtgg tgtttatcct
      901 tgcgctgtcc ctgcttttgg gtgtgcgtga aaaaaggcgg attgtccggg agttgggcgc
      961 gttgcccgcc gtggcggatt tgataaagcc ggtgcctttg tcggaagaag aacaaaaatt
     1021 ggcgcgtccg aaactgtttt ggtggaatgt cctgctgttt ttggcggcga tgagcctgct
     1081 tttttcgggc atcttcccgc cgggttatgt atttatgctg gctgcaacgg cggcgttgct
     1141 tttgaattac cgcagcccgc aggaacagat ggagcggatt tatgcccacg ccggcggcgc
     1201 ggtgatgatg gcgtccatta ttttggcggc aggtacgttt ttggggattt tgaagggtgc
     1261 ggggatgttg gacgcgattt ccaaagacat tgtgcatatc ctgccggacg cgctgctgcc
     1321 ttatctgcat attgccatcg gtgtgttggg cattccgctt gagttggttt tgagtacgga
     1381 cgcttattat ttcggactgt ttccgattgt ggagcagatt acctcgcagg cgggcgtggc
     1441 gcccgaagca gcaggttatg cgatgttgat cggcagtatc gtcggcactt ttgttacgcc
     1501 gctttcgccg gctttgtgga tgggcttggg tttggcgaaa ttgtcgatgg gcaaacacat
     1561 ccgttattcg tttttctggg cgtggggttt gtcgctggcg atattggcca gttcgatagc
     1621 ggcaggaatc gtgcctctgc cgtaaacggc gaagccgtct gaagcccgaa tcgttcctgt
     1681 ggtctgtcgc aggctctgcc tgcccgtgtg ttgcaatcgc gccccaatgc cgtctgaagg
     1741 cagttgccgg cgcggttttt tgtgccgcag ttttgaaaaa taccggcaag cgtaaaggcc
     1801 gctaaattgc ggctaatttt ggggtgttag aataggcacg gtttattttg aagggaaagt
     1861 tgatgcgtgt tttgctggtg gaagacgatg cgatgattgc ggaggcggtg tcggcaagtt
     1921 tgaaagacgg cggctatgcg gtggattggg tcaaaaacgg cgcgcggctg ccgctgccca
     1981 gccttatgac ttgatgctgc tggatttggg tttgctgggg cgggacggtt tggatgtttg
     2041 ttccgctggc aatgcttgca ggtatgtttt cctactacga aaccttccac gaaacggaag
     2101 cgttgcagga cgacctgctc cgtcaggcgg cattgtacgt cgcacccgat tccaaacccg
     2161 aaactttgcc cgagggcgac ggcgatacgc gcattttcgt gcagatgccg cagcaggaag
     2221 accctgttgt cagcctgcct gcgcatctgg cggacggtct gcacacgctt caggcggacg
     2281 gggacgacga ttattaccgc gtctatatcc gcacgaccga acagggacgg attgccgtta
     2341 tgcaggaaaa cgaataccgt gaagatttgg cggcggatgc ggcacggcaa agcgtgttgc
     2401 ccctgctggc ggcactgccg ctgatgatac tgctgaccgt gtggattacg cacaaagcca
     2461 tgcgccccgt ccgcaaattg tcgcaaagtc tcgaacaacg ccgaatcaat gacctgtctg
     2521 ctttgagtgt ggacaatatt cccagtgaaa tcagagggtt cgtaaccgcc atcaacctgc
     2581 ttttgaaacg tgcggatgaa gacatccgcc accgtcagcg gtttgtcgcc gacgcggcac
     2641 acgaattgcg tacgccgatg acagcccttt cccttcaggc ggaacggctc aacaatatgt
     2701 cgctcccacc cgatgcagcg cggcagtctg ccgttttgca gcagagcatc aggcgcaaca
     2761 aacacctgct cgaacagctt ttggcactgg cgcgttcgca gtcggatgaa acccctctga
     2821 cgaaaacgac attcggtctg caaagccgtt tccgccaagt gttgcaggaa ctgatgccgc
     2881 tggctttgga aaaacgtcag gacatcggcg tggcggtcgg aggcgatgtc gaagtgtctg
     2941 ccgacgaaac ggaaatctat acgctgatta aaacctttgc cgacaacgcg gtacgttaca
     3001 cgccgcccga aggcaggata gatttgggtt tcacggacga agggaaatat ctcgccgtgt
     3061 gggtggaaga taacgggaac ggcattcccg aatccgaacg cgcccgcgtc ctcgatccgt
     3121 tttaccgtat tttgggaacg gagcagcagg ggacggggct ggggctgtcg attgccgaca
     3181 cgcttgccaa aaaatacggc ggacatttgg aattgaccga cagccgacgt ttcggacacg
     3241 gtctgttgat acgggcgttg ttggacaagg aaaccctgaa atagacagat gccgtctgaa
     3301 ggcttcagac ggcatttttt acatcagcac aatatcgtat tgttcctgcg tgtaagcggt
     3361 ttcgaccgcc agagaaatcg gtttgccgat gaaatctatc agcattgcca aggattgcga
     3421 ttcttcgtcc aaaaacaaat cgatgacgtt gggggcggcg aggatgcgga aactttcggc
     3481 atcgtaacgg cgcgcttcgc ggacgatttc gcgctggatt tcgtagcaca cggtttgcgg
     3541 cgttttcaga cggcctctgc cttggcagga agggcagggt tcgcagagga cttggtttaa
     3601 gttttcgcgc gagcgtttgc gcgtcagctc gaccagcccc aggctggtaa aaccgtgcag
     3661 ggtaacgcgg gtacggtcga aggcgagggc tttggcaagc tcctgcaaca cggcttcgcg
     3721 gtggctttcc tgcgccatat cgatgaagtc gatgatgatg atgccgccga ggttgcgtag
     3781 cctcaattcg cgggcgatgg tgtggcaggc ttcgaggttg gtgcggaaga tggtttcgtc
     3841 gaagttgcgt gcgccgacga agccgccggt gttcacgtct atcgtggtca tggcttcggt
     3901 ggattcgata atcaggtagc tgccgaagtt gaggttgacg cgcggttgca gggcgcggct
     3961 gatttcctgt tcgacgttgt gggtttcaaa cagcgggcgt tcgcctttga acaattctat
     4021 cctgcccaat gcgccgtgga cgtattgttc ggcaaaacgc gtcatgcgcc cgtggtttac
     4081 ggtggaatcg acgaggattt tttgcgtgtc gcagccgacc atatcgcgca atacgcgcaa
     4141 actcaagggc aaatcctgat aaagcagggt ttccggcggc cggattttcg cctgttcttg
     4201 gatgtgttcc cacactttgg tcaggtagtc gatgtcggac tggagctgtt cgtcggtggc
     4261 gttttcggcg ttggtgcgga tgatgtagcc ccggcaggca ttttccggca ggagcttgtc
     4321 gaggcgttcg cgcaggctgc tgcgttcggc atcgtcttcg atgcgttggg acacgccgat
     4381 gtggtcttct tgcggaagat ggacgaggaa acgccccgcc agcgagattt gggtggaaag
     4441 ccgcgcgcct ttggtgttga tcgggtcttt gatgacctgc accaaaacag actgcccttc
     4501 aaacagcata tgttcgatgc gctgggtttc ttcggggttg cggcgttgtt cgaggacatc
     4561 gacgatgtgt aaaaacgccg cgcgttccaa gccgatgtcg ataaacgcgc tctgcatccc
     4621 gggcagcacg cggcgcacca cgcccagata gatattgccg accaggctgt gttcgctgtt
     4681 gcgctcgatg tgcagctcgc agatattgtt ttcctccaac accgctacgc gcgtttcctg
     4741 cggcgtgatg ttgaccaata tcgtttcggg cgggcgcgcg atgtctttgg ggatggggag
     4801 tcctgacaac atggtttttc ctgaaaatgt aataaaaata tttttgcacc cgttccgccg
     4861 cgcagcgcgg gtgcaaaaat atttttcaca atgcctatca tactttaaaa aagaaacttt
     4921 gacacattcc gcacatgccg tttgaacgtg catctgttcc gcacttgcca aacaggggaa
     4981 atgcccctat attgattatc attgcaaaac tttcggaaac ccaatatgca gaccgttacc
     5041 atgtacacag gtccgttttg tccctactgc gcgatggcga aaaggctgct gcacgcggca
     5101 ggtgtcggac atatcgacga aatccgtgtc gatgcaagcc ccgaagcctt tgccgaaatg
     5161 cagcagcttt cgggacagcg cagcgtgccg cagattttca tcggcgaaac gcacgtcggc
     5221 ggatttaccg acctctaccg cctccagcag gaaggcgggc tggacggact gctgaaccct
     5281 taacccccaa ctaggaaaac aaaatgagcg aagaactgca acccgtattc agcatcgagc
     5341 gactgtatgt caaagacttg tctttggaag tgccgcacgc gccgcaaatc tttttggaac
     5401 agggcgagcc tgaagtggat atgcgcgttt ccaccggcag ccaaaagctg gaagacggct
     5461 actacaacgt ggacgttacc gtaaccgtta ccgccaagct ggataacgag cgcacgatgt
     5521 ttttgaacga agtaacccaa agcggcatct tccgtttgga aaacatcccc gaagaagatg
     5581 tgcagctgct gctgggcgtg gcgtgtccga acatcctctt cccttacgcg cgcgaagccg
     5641 tttccggtac ggtaacacgt gccggcttcc cgcccgtcct gctcgcgccg attaattttg
     5701 aggcgattta ccaacaacag caggaagccg aagccgccgg ggcttgattc ctgcctgccg
     5761 atgccgtctg aatccgtttc agacggtatt tttgttttcg gataaaatag gtgcgttcaa
     5821 aggaatctgc ctatgatgtc gcccgaaacc cagaaacagc tcaaaatcac cgatgtttcc
     5881 gccaagaagc tcgacaaact caacctccat accgcgtggg atttggtgtt gcacctgccg
     5941 ctgcgttacg aggacgagac gcacattatg ccgattaagg acgcgccgat tggcgtgccg
     6001 tgccaggtcg agggcgaggt tatccatcag gaagtaacgt tcaaaccgcg caagcagttg
     6061 attgtccaaa tcgccgacgg ttccggcagc gtcctttttc tgcgcttcat ccacttttac
     6121 gccagccatc agaaacagac ggcggtcggc aaacgcatcc gcgccgtggg cgaaatcaaa
     6181 cacggctttt acggcgacga gatgattcat cccaaaatcc gcgatgccga gggcggcggt
     6241 ttggcggaaa gcctcacgcc ggtttacccg accgtaaacg gtttgaacca gcccactttg
     6301 cgccgtatta ttcagacggc gttggacgtt acgccgctgc acgacacgct gcccgatgcc
     6361 ctgctgtgcc gtctgaagct gccacacctc gccgaaagcc tgcgtctttt gcattcgccg
     6421 ccgccgagtt tcacgattca tcagctttca gacggcacgc tgcctgcatg gcaacggctc
     6481 aaattcgatg aacttttggc gcaacagctt tcgatgcgct tggcgcgaca gaagcgtatc
     6541 ggcggcacgg cggcggcatt gggcggcgac ggcacattga cccaagccct gcgccaagcc
     6601 ctgccgtttg ccctgaccga tgcgcaagaa aaagttgttt ccgaaatctg ccgcgatatg
     6661 gcgcaaacct acccgatgca ccgcctgctg cagggcgatg tcggcagcgg caaaaccatt
     6721 gtcgccgcct tgtccgcgct gaccgccatc gaatccggtg cgcaggtggc tgtaatggcg
     6781 cccactgaaa tccttgccga acaacatttt attaaattta aacaatggct cgaacctttg
     6841 ggcattgaag ttgtccgcct ttttggcagt ttgcgtaaaa aagccaaaga cgaagccaaa
     6901 gccaaactcg ccgacggcag cgtcaaaatc gccgtcggca cgcacgccct gttttcagac
     6961 ggcgtggcgt ttcacaattt gggcttgacc attgtggacg aacagcaccg tttcggcgtt
     7021 gcccaacgcc tcgccctcaa aaacaaaggg cgcgaagtcc atcagctgat gatgtccgcc
     7081 acgcccatcc cgcgcacgct tgcgatgagt tttttcgccg atttggacgt gtccgtcatc
     7141 gacgaattgc cgcccgggcg cacaccgatt aaaacgcgcc tcgtcaacaa cgtccgccgc
     7201 gccgaagtcg aaggcttcgt cctcggcact tgccgaaaag ggcggcaggc gtattgggtc
     7261 tgcccattga ttgaagagag cgaaaccctg caactgcaaa ctgctaccga aaccctagag
     7321 cagcttcaga cggccttacc cgaactcaac atcggcttgg tacacgggcg catgaaagcc
     7381 gccgaaaagg ccgaagtgat ggcgcggttt tcttcggggg ggctgaacgt cttggtcgcc
     7441 accaccgtca tcgaagtcgg cgtagatgtg cccaatgccg ccctgatggt catcgaacac
     7501 gccgagcgca tgggcttggc gcagctgcac caattacgcg gtcgggtagg gcgcggagcg
     7561 gcagaaagcg tgtgcgttct cctgtttgcc gagccattga gcgaactcgc caaagcgcgg
     7621 ttgaaagtca tctacgaaca caccgacggc tttgaaatcg cccgccaaga cctcaacatc
     7681 cgcggccccg gcgaatttct cggtgcgcgt caaagcggcg ttcccatgct gcgttttgcc
     7741 aatcttgaag aagacttaca ccttttggaa caagcgcgcg aaatcgcccc tttgctgatt
     7801 gaacaaaacc ctgaaatcgt cgaagcccat ttggcacgat ggctttccgg cagggaaggt
     7861 tatttgggcg tgtgagcgaa atgtcgccgg aaatattgga aaaaagtgca acggaatctg
     7921 attttgcatt atttttgaca cattttcatg attttaaatc tcgttattcc caagtgggcg
     7981 gaaatccggc aatgggaagc cgcagagact tatcgggaaa acggcaagcc ctccgccgtc
     8041 attcccgcgc aggcgggaat ctagaaatga aaaaccacgg tgttatcgga aatgattgaa
     8101 accggagaaa tgacggaatc gaagcgtgtg gaaatgtgtc ggaaattgct gaagctggat
     8161 aaactagatt cccgcttttg cgggaatgac gggattttag gtttttggtt tgttttcgcg
     8221 gcaatgatgg gattttaggt ttttggtttg ttttcacggc aatgatggga ttttaggttt
     8281 ttggtttgtt ttcacggcaa tgatgggatt ttaaattgca ggtatttacc gggaaaaacg
     8341 gcaagccctc cgccgtcatt cccgcgcagg cgggaatcta gaaatgaaaa accacggtgt
     8401 tatcggcaat gactgaaacc ggagaaatga cgaaattgaa gcgtgcggaa atgtgtcgga
     8461 aatcgctgaa gccggataaa ctagattccc gcttttgcgg gaatgacggg attttaggtt
     8521 tttgttttcg cggaataatg agccaaaagc cgtctgaacc taaaaaaccg ccgctttcag
     8581 atggcatcaa aaaccgcagg cacgatgcct gcggtttgcc gtttgcgctt caggggagca
     8641 gggggatgcc gcccaagccg tgtgtttcct tcagtccgaa catgatgttc atattttgca
     8701 ccgcctgtcc cgccgcgcct ttgacgaggt tgtcgatgac ggaaaggacg acccacacat
     8761 cggattgcgc cgcctgttgg atgctgatgc ggcagaggtt tgcgccgcgc acgctgcggg
     8821 tttcgggtgt cgaaccggcg ggcaggatgt ccacgaacag gctgtcgcgg taatagtcgc
     8881 gcaggatggt ttcggggcag atgccgtctg aaaggtggag gtaaacggtg gcgtgcatac
     8941 cgcgtatcat cggcgcgagg tgcggcgtga acacgaatcc ttcggcgatg ccgtcctgaa
     9001 gcccggcgat ggtctgcctg atttcgggca ggtggcggtg tccagctatg ccgtaggctt
     9061 tgaagttgtc gccgacttcg cacaacagcg aaccgacatt gcctttcctg cccgcgccgg
     9121 acacgccgga tttgcagtcg gcaatcagcg gcataccggg cttcagacgg cattgccgca
     9181 acagcggcac gagcggcagg gatacgcagg tcgggtagca gccggggttg gcgacgaggc
     9241 gcgcctgtgc gacggcttcg cggttgagtt cgctcaatcc gtacacggct tgggaaacga
     9301 ggccgggggc ggcgtgggtc atgccgtacc agtgttccca ggtcggaatg tcccatatgc
     9361 ggaagtcggc ggaaaggtcg atgacgcgca cgccctgttc aatcaggcgc ggcgcgtctt
     9421 tcatggcgat gccgttgggc gtggcgaaga agacgatgtc gcattgttcc aaacctgcct
     9481 cgtcgggcgt ttggaaggcg aggccgtaca cgccgcgcaa actcggaaag taatcggcaa
     9541 ctgcggttcc cgcttcgctg cggctggtta cggcggcgac ttcgacatcg ggatgggcgg
     9601 caagcaggcg cagcagttcc acgccggtgt agcccgtcgc gccgacaatg ccgactttga
     9661 tttttttact catggttttt cctttgtgtg gttggcgggt atgccgtccg aacgctgtcc
     9721 gacggggttt tgattggcgg cggaaggacg gtacacaaag cgtttgaaaa gcgtgtctaa
     9781 tttaatggca tccgcctctg tttttaaaac ctagccctgc cgtccggaat aaacataacc
     9841 gtaggcgcga aagccggcag gatatttcgg tgcctgcccc aaacccaaac cgtatgcggc
     9901 gaaagcggtg gtcgtggaga aggaaagcag gaggaggacg agggttttca taaggttcca
     9961 aaccgaacgg ggcgatgaag cccgattata gcaaaaggtc gtctgaaaac cgttttcaga
    10021 cgacctttta tttaattaca ataaaaatgt taacaacaaa aaacaaaccg cttttttccg
    10081 tttggagaca aatttttaac taaaattgtc aacaattcct tgatgcacac aaaaaaaaac
    10141 tttaatattt gtaaatatat gtaacattat aaattttaaa tattttctga gtaaggggaa
    10201 gtaatgagca tccatctcga cttcggcatt agtcctaaaa cgttccgaca gacttatctg
    10261 tatcaaaagc ccaagctctt taaaggagcg gttcggaatc tcgaatccgc atcttggaaa
    10321 gatatcaacg agatatacca acgagcagac ccaaccgcac cgctgtttca tctgcgtaaa
    10381 aaaggcgcaa tcgttcctaa agaagaatac gtcgaaagtt tcgacgattt gggcaaaact
    10441 cgctaccgtt ttattaaatc cgttatctac gaacatatga agaatggtgc gtcgttagtc
    10501 tataaccata ttaacaacga gccgttttca gaccatatcg cccgtcaagt cgcccgcttt
    10561 gccggcgcac atactattgt tagtggatat cttgcttttg gcagcgacga atcttataaa
    10621 aaccattggg acccccgcga tgtgtatgcc atccagcttt tcggcaagaa acgttggcaa
    10681 cttactgccc ctgatttccc tatgccattg tatatgcaac agactaaaga tactgatatt
    10741 tccattcctg aacatatcga tatggatatt atccttgaag caggtgatgt cctctacatc
    10801 ccacgcggtt ggtggcacag acctatcccg ctcggctgtg aaaccttcca cttcgctgtc
    10861 ggtaccttcc caccaaacgg ctataattac ctcgagtggc taatgaagaa atttcccacc
    10921 atagaaagtc tgcgccacag tttctcagac tgggagcaag ataggacgcg tatcaacgat
    10981 actgccacac aaattgctgc catgattgcc gaccccgtca attatgaagc cttcagtgaa
    11041 gactttctcg gcaaagaacg taccgatacc gcttttcatc tcgaacagtt cgcgaatccc
    11101 aacgctactc cgctttcaga cgacgtcagg ttgagattaa atgccaataa tttggatacg
    11161 ttggaaaagg gatatttgat tgggaatggg atgaagataa gcgtagatga gttggggaaa
    11221 aaagtgttag aacacatcgg taagaatgaa ccgttattgt tgaaaaatct actggttaac
    11281 ttcaatcagg gaaaatatga agaagttagg aagttgattt atcagttgat agagttagat
    11341 tttctggaaa ttttgtgagg gattctatga aaaactggaa gcaatttaca tttttcgtaa
    11401 tattagtaat agcttgttat caagtgctat attttttatc agatatgttt cttctcgact
    11461 acattaacaa atatagttgg aatttgaatt ttattcaggg tactttgaat tttttttcaa
    11521 tatatctgcc atatgttttt gttagccgaa tttttaggaa taccaaccaa gaaaaggagt
    11581 ataaaaatga ttgaacttca acttcatgaa ttgaagctgg tttcaggggg aggtcctgta
    11641 acagacaata tagctggaaa tgtagctaat gctgccacaa ccaaaggagg tcccacatgg
    11701 ggggatttgg ttgcaatacc tgctgccgca gcggcagttt attatctgcc gaaaaatgct
    11761 tacggtgctg ctggtgcaaa tggtgtatac aatgtgactc gtaattgggt aaatgatgcc
    11821 gttaatgcac ctccttataa cggaagacca atctttgaga ttgaacatgg attaactgct
    11881 cccgcaacaa aagcagataa atcaggaaac ggctacactg acggtacaga ttactgctga
    11941 tatttctcat cgtccagaca atctctaggg gtcgtctgaa actttcttaa cttcaatttt
    12001 atgaatagac ccaagcaacc cttcttccgt cccgaagtcg ccgttgcccg ccaaaccagc
    12061 ctgacgggta aagtgattct gacacgaccg ttgtcatttt ccctatggac gacatttgca
    12121 tcgatatctg cgttattgat tatcctgttt ttgatatttg gtaactatac gcgaaagaca
    12181 acagtggagg gacaaatttt acctgcatcg ggcgtaatca gggtgtatgc accggatacg
    12241 gggacaatta cagcgaaatt cgtggaagat ggagaaaagg ttaaggctgg cgacaagcta
    12301 tttgcgcttt cgacctcacg tttcggcgca ggaggtagcg tgcagcagca gttgaaaacg
    12361 gaggcagttt tgaagaaaac gttggcagaa caggaactgg gtcgtctgaa gctgatacac
    12421 gagaatgaaa cgcgcagcct taaagcaact gtcgaacgtt tggaaaacca gaaactccat
    12481 attttgcaac agatagacgg tcagaaaagg cgcattagac ttgcggaaga tcagtggcaa
    12541 aaacggcact gggcagacag gaattgtcgg gattgggcat ggtatcctcc gatttggcga
    12601 agagcaacga acctgtttat ctcgtgaaaa taaaacccga caaaccaacc atcactgcat
    12661 acggtgagga aaaaccgctg caaatcggca tgacgttgga agcagacatc ctacacgaga
    12721 aacggcgatt gtacga
//
LOCUS       DAWEYF010000042        12470 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.042, whole genome shotgun sequence.
ACCESSION   DAWEYF010000042 DAWEYF010000000
VERSION     DAWEYF010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12470
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.042"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..206
                     /locus_tag="WGN93_000866"
     CDS             <1..206
                     /locus_tag="WGN93_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HEZ0226790.1"
                     /translation="PRGAGGEIQLTDGIARLLDHEFVLAHAFEGKRYDCGSKLGYLEA
                     TVAYGLKHPELKDDFKELLKQFV"
     gene            289..1305
                     /gene="galE"
                     /locus_tag="WGN93_000867"
     CDS             289..1305
                     /gene="galE"
                     /locus_tag="WGN93_000867"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ0226791.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVF
                     GDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAF
                     EAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRWVSNHPN
                     GYDD"
     gene            1401..2462
                     /gene="rffG"
                     /locus_tag="WGN93_000868"
     CDS             1401..2462
                     /gene="rffG"
                     /locus_tag="WGN93_000868"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ0226792.1"
                     /translation="MKKILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESL
                     ESLANHPRYAFEQVDICDRAALDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWHDMPSEKKAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLEELVPN
                     KPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVEWYLNN
                     QTWWSRVLDGSYNRERLGS"
     gene            2675..3550
                     /gene="rfbA"
                     /locus_tag="WGN93_000869"
     CDS             2675..3550
                     /gene="rfbA"
                     /locus_tag="WGN93_000869"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ0226793.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            3605..4144
                     /gene="rfbC"
                     /locus_tag="WGN93_000870"
     CDS             3605..4144
                     /gene="rfbC"
                     /locus_tag="WGN93_000870"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ0226794.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            4306..6354
                     /locus_tag="WGN93_000871"
     CDS             4306..6354
                     /locus_tag="WGN93_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ0226795.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     VQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYR
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQY
                     ADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK
                     "
     gene            6491..7750
                     /locus_tag="WGN93_000872"
     CDS             6491..7750
                     /locus_tag="WGN93_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ0226796.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKNTSDSSTPTT"
     gene            8119..9525
                     /locus_tag="WGN93_000873"
     CDS             8119..9525
                     /locus_tag="WGN93_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ0226797.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAIGNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            9743..10957
                     /gene="gltS"
                     /locus_tag="WGN93_000874"
     CDS             9743..10957
                     /gene="gltS"
                     /locus_tag="WGN93_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ0226798.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            11056..12072
                     /locus_tag="WGN93_000875"
     CDS             11056..12072
                     /locus_tag="WGN93_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ0226799.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            12083..12280
                     /locus_tag="WGN93_000876"
     CDS             12083..12280
                     /locus_tag="WGN93_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226800.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAV
                     RLGENGFTEEQMENIANLFGR"
     gene            12298..12447
                     /locus_tag="WGN93_000877"
     CDS             12298..12447
                     /locus_tag="WGN93_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226801.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVAYADVSTRRTIYKAL
                     PYVPS"
BASE COUNT         3190 a         3300 c         2982 g         2998 t
ORIGIN      
        1 tacctcgtgg tgcaggtggt gaaatccagc taactgatgg tattgcccgc ctacttgacc
       61 atgaatttgt cttggcgcat gcgtttgaag gtaagcgtta tgattgtggc agtaagttgg
      121 gctatctgga agccacggta gcttatggct tgaagcatcc cgaattaaaa gatgatttca
      181 aagaattatt gaagcaattt gtataatttt aaggccgtct gaaaaagaaa aggcatcatg
      241 ttttttacac tttcaggcgg ccttttaaac ataaagaagg aaaacgtgat gaacattctc
      301 gttaccggcg gcaccggttt tatcggctcg cacaccgttg tttctttgct gaaaagcggt
      361 catcaagtcg tgattttgga taacctatgc aattccagca tcaatatcct gccacgcttg
      421 aaaacgatta ccggccaaga gattccgttt tatcaaggcg atatccgcga tcgtgagatt
      481 ttgcgccgta tttttgcgga aaaccgcatt gattcggtga ttcattttgc cggcttgaaa
      541 gcggtgggtg aaagtgtggc cgagccgata aaatattatg ataataatgt ttccggcagc
      601 ttggtgttgg cggaagaaat ggcgcgtgcg ggcgtgttta gcattgtgtt cagttcttcg
      661 gcgacggttt atggcgatcc gggcaaagtg ccttataccg aggatatgcc accgggcgac
      721 accaccagcc cttacggcgc atcgaaatcg atggttgagc gcattctcac tgacattcaa
      781 aaagccgatc cgcgctggag catgattttg ttgcgttatt tcaatccgat tggcgcgcat
      841 gaaagcggtt tgattggcga gcagccaaac ggtatcccaa ataatttgtt gccttatatc
      901 tgccaagtgg cggcaggcaa actgccgcaa ttagcggtat tcggtgatga ctaccctacc
      961 cctgatggca cgggtatgcg cgactatatt catgtgatgg atttggcaga aggccatgtc
     1021 gcggctatgc aggcgaaaag caatgtagca ggcacgcatt tgttgaactt aggttccggc
     1081 cgcgcttctt cggtattgga aatcatccgc gcatttgaag cggcttcggg tttaaccatt
     1141 ccatttgaaa tcaaaccgcg ccgcgccggt gatttggcgt gcttctatgc cgacccttct
     1201 tatacgaagg cgcaaatcgg ctggcaaacg cagcgtgatt taacccaaat gatggaagat
     1261 tcatggcgct gggtaagtaa tcatccgaat ggttatgatg attaagtcat gaaattgaga
     1321 ggccgtctga agtttcagac ggcctttgtt tgcgatttat agtaaaattt accttatcat
     1381 tttggcgatt aatattcatc atgaaaaaaa tccttgtcac cggcggtgcc ggttttatcg
     1441 gttcggcggt tgtacgccat atcatcaacg atacgcaaga tgcggtggtg aatgtggata
     1501 agctcacgta tgcgggcaat ttggaatcgc tggaatcttt ggccaatcat ccgcgctatg
     1561 cgtttgagca agtcgatatt tgcgaccgcg cggcactgga tcgtgtgttt gccgaacacc
     1621 agccggatgc ggtgatgcac ttggcagcag aaagccatgt tgaccgcagt attgatggcc
     1681 cagcggcatt tattgaaacc aatattgttg gtacttacac gcttttggaa gcggcgcgcg
     1741 cgtattggca tgatatgccg tctgaaaaaa aagcggcttt ccgtttccat catatttcga
     1801 ctgatgaagt gtatggcgat ttgcacggca cggatgattt gtttaccgaa accacgcctt
     1861 acgccccttc cagtccttat tcggcttcca aagcctccag cgaccatttg gtgcgcgcat
     1921 ggctgcgtac ttacggcctg ccgaccattg tgaccaattg ttctaataac tacggccctt
     1981 atcattttcc tgaaaaactg attccactga tgattctgaa tgcgcttgat ggcaaaccgc
     2041 tgccggtgta tggcgacggt atgcagattc gtgattggct gtttgttgaa gatcatgcgc
     2101 gtgcgctgta tcaagtggtc acagaaggcg aaatcggcga aacttacaac attggtggcc
     2161 acaatgaaaa agccaatatt gaagtggtgc gcaccatttg cgccctgctg gaagaattgg
     2221 tgccgaacaa accgcaaggc gtggcgcgtt atgaagattt gattacctat gtcaaagacc
     2281 gccccggcca tgatgtgcgc tatgcgattg atgccgcaaa aatcggccgt gagttgggtt
     2341 ggcagccgca agaaactttt gaaagcggca tccgcaaaac agtggaatgg tatttaaaca
     2401 atcaaacttg gtggtcgcgc gtgttagacg gcagctacaa tcgtgaacgc ttaggcagtt
     2461 aaatagagac ctttgcaaac tccccatctt tggcacattt cttcgttatg cgctgctcga
     2521 aagcttgcct atctttgtga tatgtctgcg ctttctgcgc tgctataact tcgaactgta
     2581 ctcaaatctg tggctttgca aaggcctcaa ataataaaaa tacgttcaga cggcatgaag
     2641 gccgcctgaa aaactacata aggaaagtaa actgatgaaa ggcattattc tcgcaggcgg
     2701 cagcggtatc cgcctttacc cgattacccg cggcgtatca aagcaattac taccggtgta
     2761 caacaaaccg atgatttatt accccttgtc ggtgttgatg ttggccggaa tccgcgatgt
     2821 gctggtgatt accacccccg aagacaacga tgctttccgc cgcttactgg gtgatggcag
     2881 cgatttcggt attcaaattt cctacgccat ccaacccagc cccgatggtt tggcgcaagc
     2941 ctttttaatt ggtgaagaat ttatcggcga tgattcggtg tgtttggtgt tgggcgacaa
     3001 tattttctat ggccagcatt tcagccaatc cctgaaagaa gccgccgctt ccgtggaaac
     3061 caaaggtgct accgtattcg gctatcaagt gaaagatccc gagcgtttcg gtgtgattga
     3121 gtttgatgag aatttcaaag ccctgtcaat cgaagaaaaa ccgaaacaac ctaaatccga
     3181 ttgggcggta accggcctct atttctacga taatcgcgta gtcgagtttg ccaaacaagt
     3241 gaagccgtct gaacgcggcg aattggaaat taccaccttg aatcaaatgt atttggacga
     3301 tggttcgctc aatgtccaat tgctcggtcg cggtttcgca tggcttgata ccggcacaca
     3361 cgccagcctg ttggaagcag cctcgtttgt cgaaaccatt gaaaacattc aaaacctaca
     3421 agtcgcctgt ttggaagaaa tcgcatggcg taatggctgg ttgagcagcg aagaaatcag
     3481 aaacttggca aagccaatgt gtaaaaatga atatggccgc tatttattgc gcttggttgg
     3541 caaagattaa gaggttgctt ttaccagttt tcaggccgtc tgaaacgctt tttaggaaaa
     3601 catgatgaat atcatcgata cccgcattcc cgatgtcaaa ttgctcgaac ccaaagtctt
     3661 cggtgacgag cgtggttttt ttatggaaac cttccgtgat gaatggttcc gccaaaatgt
     3721 agccgagcgc actttcgtgc aggaaaacca cagcaaatcc acccaaggcg tattacgcgg
     3781 tttacattat caaaccgaaa atacacaagg caaactggtg cgcgtggtat caggcgaagt
     3841 ctttgatgtt gccgtggata tgcgtcgtga tagtcctact ttcggccact gggtcggtga
     3901 ggttttatcg gcagacaaca aacgccaatt atgggtgccg gaagggtttg cccatggatt
     3961 ttatgtgttg agcgatgaag cggaattcgt ctacaaatgc accgactatt acaacccgaa
     4021 tgcggaacat tccctaattt ggaatgatgc cacagtggga atcgactggc ctttattggg
     4081 agaaccaagc ctatcggcca aggatttggc aggcaagatg cttgctgaag cggccacatt
     4141 ttaattttca cttttaggtc atcgtgggta atttgtagca agatgaccta atttttacca
     4201 gctagcctac taactaaatt tctactatat ttaaatagtc agaaaattta cacaaaatct
     4261 gttaataaga tattatattg tcagtaatat tttttcctat ttattgtgat tcctgcctac
     4321 attcctcttc gctctttcgg tatacgtaaa attccgaata ttacgcaatt tctaccggaa
     4381 tattcactta acaaaaccgt attcaacgcc caaaccatca ttggctgggg cttacgcccg
     4441 accacccacc aagcacgtgc ttttgcacaa tcacatggct tgccgtttgt agccttggaa
     4501 gacggttttt tacgctcact gggcttaggc gtggccggtt atccgccctt cgcactggtt
     4561 tacgacgata tcggcatcta ttacgacaca acccgcccat cgcgtttgga gcagttgatt
     4621 ttagccgcaa acatgccgtc tgaaatgctt aaccaagcgc agcaggccat tgatttgatt
     4681 ttgacgcacc gtttgtctaa atataaccat gctctggatt tttcagacgg cctcgtacaa
     4741 gacagcaaaa acattgtttt ggtaattgat caaactttcg gcgatatggc gattcaatat
     4801 ggcggcgcag atgaagccac attccgccaa atgtttcaga cggccttagc cgaaaatcct
     4861 gatgcggaaa tctgggtcaa aacccatccc gatgtattga gcggcaagaa acagggttac
     4921 cttactgatt tggcacagca gccgcgtgtg cgtttattgg ctgaagacat taatccgatt
     4981 tcgctgctgc aagcggtgga caaagtgtat tgcgtgacct cgcaaatggg ttttgaagcc
     5041 ttgttgtgcg gcaagccttt ggtaacgttt ggtttgccgt ggtatgccgg ctggggtgta
     5101 agcgacgacc gccatcctga aatcaaccgc cttgttcaaa cccaacgccg cgccacccgc
     5161 aacttgctgc agctcttcgc cgcagcctat ctgcaataca gccgctacct caaccccaat
     5221 accggcgaag caggcagcct ctttgatgtc atcgactatc tggcgacggt caaacgtaaa
     5281 aacgacaaat tgcgtggcga gttatattgc gtcggtatgt ctttgtggaa acgcgcggtt
     5341 gccaaaccgt tctttaacgt accctcttgc cgtctgaaat ttatctcttc cacccaaaaa
     5401 ctggcaaggg tcaaactgtc cgacgatgca cgcatcctgg cttggggcaa cggcaaagag
     5461 gccatcgtcc gctttgccga acaacaccac atccccctgc tgcgcatgga agacggcttt
     5521 atccgctcgg tcggactcgg ctccaactta gtgccgccgc tgtcgctcgt taccgacgat
     5581 atgagcattt atttcaatgc cgaaaccccg tcccgtcttg aatacatcct acaaaaccaa
     5641 aacttcgacg atcaagactt tcagacggcc ttgaagctgc aaaaaatgct gaccgaaaac
     5701 cacatcagca aatacaacgt cggcagctca gacttcaccg ccccgtcaac cgacaaaacc
     5761 gtgatcctcg ttcccggcca ggttgaagat gatgcgtcta tccgctacgg ttcgccccaa
     5821 atctaccgca atctggattt gctccgtacc gtacgcgaac gaaaccccaa tgcctatatc
     5881 atctacaaac cgcatcccga tgtagtcagc ggtaaccgca tcggccatat ttcccctgaa
     5941 gatgctgcac gatatgccga ccaaaccgcc gaacaagccg acatcctgac ctgtctccaa
     6001 tacgcagacg aaatacatac catgacttcg ctgaccggtt ttgaagcctt gttgcgcggc
     6061 aaaaaagtca gctgctacgg cctgcctttt tacgcaggct gggggcttac ccaagatctg
     6121 ctccccatcc cgcgccgtag ccgcagactt gagctttggc agctgattgc cggcacgctc
     6181 atccactatc ccgactacat ccaccccgaa acccatcagg ccataaatgc agaaaccgca
     6241 gcccaaatcc tgatacgaca aaaaaatatg caaaaaaaca acaacggatt gcatcgcggg
     6301 tgctttgcca aaaaattagg taaaatcaaa caactatatc gatctttcaa ataaatacca
     6361 tcaaagttaa cgatgcgtca taaacttgcc tctattgcgg catcattgcc tttgcatcgt
     6421 taattctctt ggcgtatgct tgaaagttca acctaaaact attacataaa aaacaaaacc
     6481 acattgcaac atgaaacaga ccgtcctcaa aaataacctg caaaacctgc ttgaaagcgc
     6541 agaaaatatc ctgctgcttc aaggccctgt cggcgatttt tttctgcgcc ttgccgactg
     6601 gctgactgca aacggcaaaa ccgtacataa attcaacttt aatgcaggcg acgactattt
     6661 ttatccgccc actcaagcgc ataccgttgt ttttaacgac aactacgatg cctttcctga
     6721 gtttttgcaa gaatacatca ctcaacatca catccaggcc gttgtctgct ttggcgacac
     6781 acgcccttat cacgtcattg caaaacgcat tgcaaacgaa aaccaagcca gtttctgggc
     6841 gtttgaagaa ggctatttcc gcccctacta catcacctta gaaaaagacg gcgtcaacgc
     6901 attttccccg ttgccgcgcc gtgccgactt ttttcttgaa caattcccta agcttgccca
     6961 gcaagaatat aaagcgccaa cgccggtaca cggcggtttt acgcccatgg caaaaaacgc
     7021 tatccgttac tatatcgagt tgttccgcaa tccacgcaaa taccccgact acatccacca
     7081 ccgcgcaccc aatgccggcc attacctcaa accgtggtcg ctctccatcc tcaagcgttt
     7141 gaactactat attgaagaca tccaaatcgc caaacgtgtg gaagcaggca aatacggcaa
     7201 gttttttatt gttcccttac aggtattcaa cgacagccaa gtccgtatcc attgcgactt
     7261 tcccagcgtc cgcagcttcc tgctccatgt tttgagttca tttgccgagc acgcgcctgc
     7321 cgataccaac atcatcatca agcatcatcc tatggaccgc ggctttatcg actactggcg
     7381 cgacattaaa cgctttatca aagaacaccc cgaactcaaa ggccgtgtga tttatgtcca
     7441 tgatgtcccc ctgcccgttt tcctgcgcca cggtctcggc atggttacca tcaacagcac
     7501 cagcggcctg tccggactga ttcacaatat gccagttaag gttctcggcc gtgcctatta
     7561 tgatattccc ggcattactg accaaaatac cttggcagaa ttttggaatc atccgacacc
     7621 gcctgacaaa gagctgttcc atgcctaccg aatgtaccac ctcaacgtga cccaaattaa
     7681 cggcaacttc tacagtcagg tcttttttcc taacaaaaac acatccgact cttccacacc
     7741 aacaacctaa cttggcgaaa gaaaagctca ggccgtctga aaacatttca gacggcctga
     7801 aacaatcaat accttagcta ctgccatgta aataaaacac aaaaatctgc atttatcatt
     7861 aacaataaat tacaaaaaca gtataatgac cgagctgcca tgagcgcata ccgactcaac
     7921 ctgagccctt tgtaacacac aaaatatgga tatatcccta ggcaaaacaa tataacaagc
     7981 caaacatcct aaagataagc cggcaaggca atacactcta taaaactgtg ccgagcaaaa
     8041 tttttacaaa gccctcaacc ggtatcgccg cccatatgcc gcagcatccg tcttccactt
     8101 tatatccgcc cgcaaaccat gaccgccgct cctgatatcc tctaccggca agccgccgcc
     8161 cttttggaac aatccaatac cgcccaagcc ctgcccctgt tgcaacaggc ggcagagcaa
     8221 ggttatgcgg aagctgcttt cgtattgggc aaccatctgc tgcaaaacgg ccaaccggag
     8281 caggcacttt catggttgga agccgccgcg gcccaacgcc atcccaaagc actcttctcc
     8341 ctgctgcaac aacgcgaaca caacggcacc ccgaccggac agcttctcaa cgactatgcc
     8401 tggctgggtg agcaggggca ctcagaagcc caattaatcc tcatgcgtta ccacgcgcaa
     8461 cgcaacgatc cacaatcgct ctactgggcg gaacttgctg ccgcccgata tgccgcacct
     8521 gcgtattacc atctggcacg ccatcatcaa cgccaaggcg acgttgaaac agccatcgaa
     8581 caatacgaaa aagcggcagc actcggcgta actgccgcct gctggcaact tggtcaaatc
     8641 tacttctacg gtacaggtgt cagccccaac cacgcacaag ccgaacacta tctcgaacca
     8701 gccgcacaag ccggccacat cgccgcacaa acgctgctgg ctgaccttct tgccgcccaa
     8761 cgcaaacctg aagccttgga atggtatcgt cgtgccgccg ataaggaaca agcggaagca
     8821 cagtctaagc tggcccaata cgccctgacc ggcgaacttt ccgaacgcga tccgttccaa
     8881 gcggcacgat atgccaaagc cgctgccgag aaaaaccatc ctgaagccct gaaaatcatg
     8941 ggcgacctct accgctacgg tctcggtatc aaagccgaca accatatcgc gcaagattac
     9001 taccaccgtg ccgccgcgct gggttctgcc gccgcagcac aaaaactcat cagcgacgcc
     9061 gcgctgtacc atccgcaaca atacgaacaa atcaaaactg ccgccctgca acaacaacaa
     9121 accgaaacca tctaccgttt ggcggaagca caagcctgcg ccatcggccg tcccgccgac
     9181 tacaatgccg cgcgaaaaaa ttacatggaa gctgccgggt tccaccataa aaacgcagcg
     9241 gcagccttag gccgcatcta ccattacggc ctcggtacgg cgcaagatcc tcgggcggct
     9301 gcacactggt acgccattgc tgccgaacaa aaccaccctt ccgcccaata ccacctcgcc
     9361 tgtttttact atcacgggca aggtgtcggc tgtcatgttc cgaccgcctg ctactggctg
     9421 caggccgcca tcggcaacgg ccacacttcg gccgaatcat taatatccct attagaacaa
     9481 tggcgacgcg aagcacacca tgccatcgga caaaaggccg tctgaaaaga tttacactcg
     9541 cattttttga caatctttaa ctattcccct aatatttgcc agttattttt cacggacacg
     9601 ccattgtttt catttctttc tgaaaacacc ttgtccgcgc atcaatacca tgacactcgg
     9661 cggataacgc caagcgttga aacacactac atccggaaca aaaacggatg ctcggaaaaa
     9721 tatttctagg aggtgaaaca acatggaatg ggaattcaac agttattaca cactgattgc
     9781 cgccacgctc gtgttgctgg ttggtaaatt tctggttcaa aaaatcaaat tcttacgaga
     9841 cttcaatatt cccgagccgg tcgctggcgg tttggttgcc gcgattatcc tgtttgcgct
     9901 gcacgaggcg tacggcgtga gcttcaaatt tgagaaaccg ctgcaaaatg cgtttatgct
     9961 gatttttttc acgtccatcg gcttgagcgc ggatttttcc cgtttgaagg cgggcggttt
    10021 gccgctggtg gtttttaccg cgattgtggg cggatttatc ttggtgcaaa actttgtcgg
    10081 ggtcggactg gctacggctt tgggtttgga cccgctcatc ggtctgatta ccggttcggt
    10141 gtcgctgacg ggcggacacg gtacgtcagg tgcgtgggga cctaattttg aaacgcaata
    10201 cggcttggtc ggcgcaaccg gtttgggtat tgcatcggct actttcgggc tggtgttcgg
    10261 cggcctgatc ggtgggccgg ttgcgcgccg cctgatcaac aaaatgggcc gcaaaccggt
    10321 tgaaaacaaa aaacaggatc aggacgacaa cgcggacgac gtgttcgagc aggcaaaacg
    10381 cacccgcctg attacggcgg aatctgccgt tgaaacgctt gccatgtttg ccgcgtgttt
    10441 ggcgtttgcc gagattatgg acggcttcga caaagaatat ctgttcgacc tgcccaaatt
    10501 cgtgtggtgt ctgtttggcg gcgtggtcat ccgcaacatc ctcaccgccg cattcaaggt
    10561 caatatgttc gaccgcgcca tcgatgtgtt cggcaatgct tcgctttcgc ttttcttggc
    10621 aatggcgttg ctgaatttga aactgtggga gctgaccggt ttggcggggc ctgtaaccgt
    10681 gattcttgcc gtacaaaccg tggtgatggt tttgtacgcg acttttgtta cctatgtctt
    10741 tatggggcgc gactatgatg cggcagtatt ggctgccggc cattgcggtt tcggcttggg
    10801 tgcaacgccg acggcggtgg caaatatgca gtccgtcacg catactttcg gcgcgtcgca
    10861 taaggcgttt ttgattgtgc ctatggtcgg cgcgttcttc gtcgatttga ttaatgccgc
    10921 gattctcacc ggttttgtga atttctttaa aggctgattt tccgcctttc cgacaaagca
    10981 cctgcaaggt ttaccgcctg caggtgcttt tgctatgata gccgctatcg gtctgcaccg
    11041 tttggaagga acatcatgta tcggaaactc attgcgctgc cgtttgccct gctgcttgcc
    11101 gcttgcggca gggaagaacc gcccaaggca ttggaatgcg ccaaccccgc cgtgttgcaa
    11161 ggcatacgcg gcaatattca ggaaacgctc acgcaggaag cgcgttcttt cgcgcgcgaa
    11221 gacggcaggc agtttgtcga tgccgacaaa attatcgccg ccgcctacgg tttggcgttt
    11281 tctttggaac acgcttcgga aacgcaggaa ggcgggcgca cgttctgtat cgccgatttg
    11341 aacattaccg tgccgtctga aacgcttgcc gatgccaagg caaacagccc cctgctgtac
    11401 ggggaaaccg ctttgtcgga tattgtgcgg cagaagacgg gcggcaatgt cgagtttaaa
    11461 gacggcgtat tgacggcagc cgtccgcttc ctgcccgtca aagacggtca gacggcattt
    11521 gtcgacaaca cggtcggtat ggcggcgcaa acgctgtctg tcgcgttgct gccttacggc
    11581 gtgaagagca tcgtgatgat agacggcaag gcggtaaaaa aagaagacgc ggtcaggatt
    11641 ttgagcggaa aagcccgtga agaagaaccg tccaaaccca cgcccgaaga cattttggaa
    11701 cataatgccg ccggagggga tgcagacgta ccccaagccg cagaaggcgc gcccgaaccg
    11761 gaaatcctgc atcctgacga cggcgagcgt gccgataccg ttaccgtatc acggggcgaa
    11821 gtggaagagg cgcgcgtaca aaaccagcgt gcggaatccg aaattaccaa actttgggga
    11881 ggactcgata ccgacgtgca aaaagagttg gtcggcgaac aacgcaagtg ggcgcaggaa
    11941 aaaatcagca actgccgaca agccgccgcg caggcagacc ggcaggaata cgccgaatac
    12001 ctcaagctgc aatgcgacac gcggatgacg cgcgaacgga tacagtatct tcgcggctat
    12061 tccatcgatt aggggcaaac cgatgaatac cgtcccaaaa agcaggattc ccgtcaaacc
    12121 gctgcccgaa aaaaccacag acgaagccaa agtcgaaaaa tggcggcagc tcggtgcgga
    12181 acacggtttg tcgggcgaat gggcagttgc cgtcagattg ggcgaaaacg gttttaccga
    12241 agaacagatg gaaaatatcg ccaacctgtt cggcagataa agagaaaatt gacggaaatg
    12301 ccgtctgaaa ccctgttatc ggtttcagac ggcattttga ccaatacggt acgcaggcgc
    12361 aaaacagccg gcttttcctg tgttgcctat gctgatgttt caacacgcag gacgatatat
    12421 aaagcgttgc cctatgtgcc gtcctgattc ggaaagggtt acgcccctcc
//
LOCUS       DAWEYF010000043        12239 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.043, whole genome shotgun sequence.
ACCESSION   DAWEYF010000043 DAWEYF010000000
VERSION     DAWEYF010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12239
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.043"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="WGN93_000878"
     CDS             complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="WGN93_000878"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ0226802.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNMINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVSADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGINVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTAGYRELLADMENSLKSITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIVHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKEDNPLVNAPHTASDVTGEWAHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3163..3525)
                     /locus_tag="WGN93_000879"
     CDS             complement(3163..3525)
                     /locus_tag="WGN93_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226803.1"
                     /translation="MTDRPNLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAYPLAWLVPAGFMVLGGGFPLSLPLVALLVLTCCILLARCPPL
                     SRLLCYPCPNHPMSKNSA"
     gene            3473..3703
                     /locus_tag="WGN93_000880"
     CDS             3473..3703
                     /locus_tag="WGN93_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ0226804.1"
                     /translation="MISACPGFIHSRFGRSVMPSEPADHLFQKTPYRRNFMRLYGVGF
                     ALQTAYASRSSLVFQSVHDYINNLGADKPLFI"
     gene            complement(3696..4337)
                     /locus_tag="WGN93_000881"
     CDS             complement(3696..4337)
                     /locus_tag="WGN93_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ0226805.1"
                     /translation="MPSEKPMNRRIFLLGAGALLLTACGRKSARTHAKIPEGSSVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVLV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(4327..4878)
                     /locus_tag="WGN93_000882"
     CDS             complement(4327..4878)
                     /locus_tag="WGN93_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ0226806.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFDEADIERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAV"
     gene            complement(4882..5400)
                     /locus_tag="WGN93_000883"
     CDS             complement(4882..5400)
                     /locus_tag="WGN93_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ0226807.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5400..7061)
                     /gene="pqiB"
                     /locus_tag="WGN93_000884"
     CDS             complement(5400..7061)
                     /gene="pqiB"
                     /locus_tag="WGN93_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ0226808.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(7054..8514)
                     /locus_tag="WGN93_000885"
     CDS             complement(7054..8514)
                     /locus_tag="WGN93_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ0226809.1"
                     /translation="MGSAVGGQPLEKIFLPDTNGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGGRADVPRLDRGEAAFCPR
                     CGHKLFRVGRHPFSGPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMVRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            8864..9493
                     /locus_tag="WGN93_000886"
     CDS             8864..9493
                     /locus_tag="WGN93_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ0226810.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            9668..12138
                     /locus_tag="WGN93_000887"
                     /pseudo
     CDS             9668..12138
                     /locus_tag="WGN93_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
BASE COUNT         2946 a         3006 c         3323 g         2964 t
ORIGIN      
        1 gaggcaacgc tgtactggtt tttgttaatc cactatattt gtttgtccgt gtggaaatga
       61 catcaaaggg tgtgaatagg cttttcatct ttgaaatctg tttgcacgat cggatgaata
      121 aaaagtagga tgataaaaaa gctgatgtat ggatactggt ttaactcatt tgttttaaag
      181 ttatagtcga gatacgtgta ttggtgcaac cagtctgccg ttgacgaaaa tgccgtctga
      241 aaatgtttca gacggcattt gtcttcgggg tttcaacggt cagtcttcat aattttccat
      301 cggtgggcag ctgcacacga gattgcggtc gccgtacacg tcgtccacac ggttgacgct
      361 cggccagaat ttgtgttcgc ggacgaatgg caacggaaag acggcttctt cacgggagta
      421 cggatgcgcc cattcgccgg ttacatcgga tgcggtatgc ggagcgttga ccagcggatt
      481 gtcctctttc ggccattcgc cgcgcccgac tttcagcact tcctgtttga tttgtttcag
      541 ggcggcgatg aagcggtcga gttcggcttt gctttcgctc tcggtcggct cgatcatcag
      601 cgtaccggca acggggaagg aaaccgtcgg ggcgtggaag ccgtagtcca tcaggcgttt
      661 ggcgatgtcg gtttcagtga tgccgctttc ggctttgagc ggacgcaaat cgacgataca
      721 ttcatgcgcg acgcggccgt ttttgcctgt atacagaatc ggatagtctt cgctcaggcg
      781 tttggcaacg tagttggcgt tgagcaatgc ccagcgtgtc gcctgttcca tgccttgttt
      841 gcccatcatg gtcaggtaca tccaagtaat cggcagtatg gacgcagaac cgaaggccgc
      901 agcagcaacg gcggtttggt cggcactggc gctgtgggtg tcggtcaaag cgtgtcccgg
      961 tgcgaacgga gccagatggg ctttcaagcc aatcggaccc atgcccggac cgccgccgcc
     1021 gtgagggata cagaaggttt tgtgcaggtt catgtgcaac acgtccgcgc cgacttcggc
     1081 aggctgcatg atgccgattt gggcgttgag gttggcgccg tccatgtaaa cctgtccgcc
     1141 gttttcatgg acgatgcggc agatgtcgcg gatgccttct tcgtacacgc cgtgggtgga
     1201 cggataggta atcatgatgg cggacaaagc gtcgcggtgt tgctcggctt tggctttcaa
     1261 atcgtcgatg ttgacgttgc cgtgttcgtc ggtatcgacg acgacgactt tcaaaccgag
     1321 catggcggcg gtggcggggt tggtgccgtg ggcggatttg ggaatcagac agatgttgcg
     1381 ctgcgcttcg ccttgcgctt cctgatagcg gcggatggca agcataccgc tgtattcgcc
     1441 ctgcgcgccg gagttgggct ggaaggaaat tgcatcaaaa ccggtgatgg atttcaggct
     1501 gttttccata tcggcgagca attcgcggta gccggcggtt tgcgcttcag gagcgtaagg
     1561 atggatgtcg gagaactccg cccaagtaat cggcaacatt tccgcagtcg cgttgagttt
     1621 catggtgcag ctgcccaatg aaatcatgct gcggttcatc gccaagtcgc ggtcttcgag
     1681 ttttttcagg tagcgcagca tttcgtgttc ggtgtggtaa cggttgaaca cgggatgttg
     1741 cagaatgtcg tcttgacgca gcagttcggc gttcagacgg cctttgacat catcggcaaa
     1801 tgcgaacgta tccttgccgg taaacgcgcg gtacaaatca accaaatctt cgcatgccga
     1861 tgtttcgtgg aatgcagccg caacttgagt atcgttaacg cggcgcaggt tatagcccga
     1921 ttccaaagca gcggcaaaca cttggtctgc tttctctttg ttgccgaaat cgacggtaac
     1981 ggtatcgaag aagactttgt gaaccacatt aatgccgtct gaaaccagcg catcggcaaa
     2041 agcagaagcc agcgcgtgaa tgcggttggc gatgcgtttc acgccttcag ggccgtggta
     2101 aacggcgtac atacccgcca agttcgccag caatgcctgc gcggtacaaa tattggatgt
     2161 cgctttttcg cggcggatgt gttgctcgcg ggtggacaac gccatgcgca aggcaggttt
     2221 gcccgatgcg tctttggata cgccgatgat gcggcccggg gcggaacgtt tgaactcgtc
     2281 tttaaacgcg aaataagcag catgcggacc gccgaagccc atcggtacgc cgaagcgttg
     2341 ggtgttgccc aaagcaatat ccgcgcccaa ttcggcaggc gatttcagca aaaccaagct
     2401 cataatgtcg gcggaaacgg ccacgattgt gcctttggct ttcagacggc cgataacgtc
     2461 ctgcaagtct tgcacatcgc cgtctttgcc gacgtattgg aacagcgcgc cgaagtattc
     2521 gccctcgtcg gcttgagcaa aatcgccgac caccaattca aagccgaaat atttggcgcg
     2581 ggttttcatc acgtccaaag tttgcggata cacgcgcgca tccacgaaga aacgctcgga
     2641 tttcactttg cccacgcggt gcgccatcgc catcgcttcg gcggcggcag tcgcttcgtc
     2701 cagcaaagac gcgcctgcca cggggaagcc ggtcaaatcg atacacactt gttggaagtt
     2761 caacaacgct tccaaacgcc cctgggcgat ttccgcctga tacggcgtgt aggcggtgta
     2821 ccaacccgga ttttccaata cgttacgcaa aatcacgttc ggcacgcggg tcgggtaata
     2881 gcctaaaccg atataggatt tgttgatcat gtttttcgac gcaatgcctt tcaatttcgc
     2941 caatgcgtcc gcttcggtca gggcttcggg caaatcgagt tcggacggca tacggatgct
     3001 ttgcggcacg gtattgccga caaaatcgtc catgcttttc tcgccgacag cggcaagcaa
     3061 cgccgcttcg tcgccgaaac tcaaatgccg cgcggcaaat tcgtcggggt tgaacagttc
     3121 ggacagtttc atttctactc cttcgggttt gtagggctgc catcaggcag aatttttaga
     3181 catcggatga ttcgggcaag ggtagcacaa aagacgggat aatggcggac aacgcgccag
     3241 cagaatgcag caggtcagga caagcagcgc cacaagcggc agcgataagg gaaagccgcc
     3301 gcccaaaacc atgaaacctg caggcaccag ccaagccaat ggatacgccg gaagcggaaa
     3361 aacaatattg agcagaacca aaatcacgac aaacagcggc agacccgcca tcaggttggc
     3421 acgcctgtat gttgcgtacg ggtcggatgc ttcttcaggt tcgcaatatt ccatgatttc
     3481 agcctgtccg ggctttatcc acagcaggtt cggacggtcg gtcatgccgt ctgaaccggc
     3541 agaccatctt tttcaaaaaa cgccataccg ccgcaacttc atgcggctgt atggcgtagg
     3601 ttttgcactt cagacggcat atgcgtcccg aagcagtttg gtgttccagt cggttcatga
     3661 ttatataaac aacttgggtg cggataaacc tttgtttatc taaacccctg ttttctcaaa
     3721 aattgattca aatcttcggc aaatttccga tagcctttgc cgttggcgtg gatttggtcg
     3781 gatttcagat tattatcgcc caaaatttcc gcccacgcgc cgccgaacag cggaatgccg
     3841 tattcctcgg acaaatcctc atacagcgga tgatcgctca aatgtccgaa caacgcgccc
     3901 agtgtgatgt gcggcacgcc gacgaggacg gcggggatgt tttccttctg cacggtttcg
     3961 atgattttcg cgatattggc gcgggtctgc tccttgggaa ctttgcgcag aaagtcgttg
     4021 ccgcctatgc cgacaagcac aagcttgggt ttgcgtgcca acagcgcggg caggcgcgac
     4081 agggcttggg cggatgtatc gcccgatacg ccgccgttga caatattcca acccgtcagt
     4141 ttttgcagtt gcgcggggta ggattcgcca gggtttgcgc cgtagccgaa ggtaagcgaa
     4201 tcgcccaagg caagtacgga gcttccttcg ggaattttgg cgtgggttcg ggcggatttt
     4261 ctgccgcagg cggtaagcag caacgcgcct gcgccgagga ggaagattct tctgttcatt
     4321 ggtttttcag acggcatcga gccatttcgg gtggtatttc agggtttcgc ggtaaaccgg
     4381 acagctttcg gcgtgcgcgc ctttgaggta gccggtactc atcagaaatt cgccgacgat
     4441 ttcgccgccg acgaatttga aatgtttttt aaagagtttg acccattcgt ctttgcttcg
     4501 cggatggtgc gcgtcaagcc agttcttgaa cgagccgtat tcttgttgca acgcttggat
     4561 ttgccgtgca ttgaaaatgg cggcatcgat tttcaggcgg ttgcggacga tgcccgcatc
     4621 ggcaagcagc cgctcaatat cggcttcgtc aaatgcggca accgtatcga tgtcgaaccc
     4681 ttcaaatgct gtctgaaacg cctgccgctt cttcagcatc agcgtccagc tcaatcctgc
     4741 ctgattgatt tccaacacca gccgttcaaa caattcattg tcgtcctcaa tcggaaaacc
     4801 gtattgcgtg tcgtggtaat gtttgttcgg gttgtcggtg ttttcgggaa gtgaggcggc
     4861 aaattcgcaa tagttcacgg tttactcgac catctgttgc gccgcctgtt tcagtccctg
     4921 ttcgagtgcg gcggtcatcg cggcgtagcc gtcaccctgc tgttcggttt cgatatggaa
     4981 gggtctgttc gtaccgtcgg gtaggacggc gtagccgctg atgagggttt tgcccgtgta
     5041 gctgccttgg aatgcgtcaa tatagaccgt ccatttttcg gtactgccgc tgcgtgaggc
     5101 aggaacaaag atgcgtgtgc tgtccaaacg gttgaatgca ttgctcaacg ccgcttcgag
     5161 catatcgtcc aaggtgtccg cccaaacgtg gttttgtgcg gtgttgaggc ggtaggggtc
     5221 ggtttgatag accagtccgc cgcgtttgag cggttcggca aggcggactt cgacggcggt
     5281 ttcgccgcct tgcgttgcag ggcggatgta gcggctgtcg ggcaacacga aatattgtgt
     5341 gctttgcaca gtaccgcagg cggcaagcgt cagggcggcg gcgatgggga agaggcgcat
     5401 tatcggcttc ctttcgggat agggtctttg ctgctgctgt tgaaaatcag cgcgttgggt
     5461 ttttctttca aagtgttaat gacgggttga acgtctttta aggttttgtc caaactttgc
     5521 agcgtatttt gtacgtcgcc gtagataggc gattgaggcg atacgccttg cagggttgtg
     5581 cgcaactctt tcagggtttg gttcagttcg ttcggaatgt tttgtgtctg cggtttgccg
     5641 accagtttgt cgatggagct tagggcggca ttggcagatt tgagtgtgga tttgagctcg
     5701 gcaagcgaac cgttcaattc ggcaaccgtc ttatctaaag gcagtttgtc gaacttgtcc
     5761 agcaaatccg ccaatttgac ctgcaaatcg tccaaaccgc cgccctgggt cgcgataacg
     5821 gtatcgcctg cataaacggt atgcggtcgc agcttgggcg aagacgaagg ctgatcgttc
     5881 aactcaatca ttttgctgcc ggtcagcagg ttgttgctgg agatggtggc ggtcaggcct
     5941 ttgtttaagg ccgtctgaaa ttgttgtttc caatgttctt tgctttgctc gtcggcattg
     6001 atttccaaac gggaaggctc gatgcggatg cgtacgggaa tccaaccgtt ttcaaacaga
     6061 tgcaggctgt cgttgcggtc gaaataaggg acatcggaaa ccacgccgac attcagccct
     6121 ttgtactcga cgggcgaacc gacggtcagg ccgcgcacgg attgtttgaa aaacgcggtg
     6181 tagtacagcg agcggtcgtc aggcaggttg gcgacttcgc tgcggctgtc gtaaagcgtg
     6241 aagctgtctt cgcttttgac gtttttactg tttttggttt tcggcgaatc aaatgaaatc
     6301 gcgcccgaca gcagggcagg cagaggggcg gaattgagtt tgatgccgct gcctgtggtt
     6361 tcgatattga tgccgctttc cagccagaaa cggctggcgg aatgaatcag tttgtcgttg
     6421 gggctttgga tgaagatggt gtaatgcacg ctttggtcgg acgggtcgaa atgcgcgctt
     6481 tcgacttgcc cgaccataaa gttttcatac aaaacagggc tgttgacgtt gaggatgcgg
     6541 tcgtttttac caatcaaatt caagcgcagc ccgctttgcc cgatggcggt aacgggcgga
     6601 atgtcctgca cttggaacac gtcttttgcc tcgtcgcttt tgccgggtgt aaaagcgatg
     6661 tacgaacccg aaagcagcgt acccaaaccg gttacgccgc tttggtcgat acgcggcttg
     6721 accacccaaa actgggtatc gctgcggatg aggccggata cgtccgcatt gagttgggcg
     6781 gttacttcca cgcctttttg gtcgtcgcgc agtttgattc gggtaacgcg tccgacatcg
     6841 atgctcaata ccttaatgac cgtattgttg acctcaatgc cttccgcgct gtccatcaag
     6901 agcgtaacca caggccccct gttgcggatt tccttaaccc aaagccagcc gccggcaatc
     6961 agcgcaatca gcgggaccag ccagacggcg gagagcaagg tgttgttttt gcggacgcgt
     7021 gcttgggcgt gtccgtttgg aggagggctg ttgtcagtca tatttttccg tttcattgaa
     7081 agcaatgccg tctgaagcgc gtttgtccca aagcaggcgc gggtcgaaat aataggcgga
     7141 cagcatcgtc agaatcacga ccaggcagaa atagactgcc gcactgcccg gaatgacgcg
     7201 cgcggcataa gtgtggaacg aacacatcaa aataataatc acaaaaatat caatcatcga
     7261 ccagcggccg actgcttcgg tgatgcggta gaggtgcgac aatttctttg cgcccgttgg
     7321 caaagcgaag cgggcggacg caatcaaaac cgacattgcc gcaatcttca gtaccggcac
     7381 caaaatactc gcgctgaaaa taaccgccgc aatcagcctg tcgccctcgt cccacatata
     7441 agcgatgccg ttaaggatgg tattgacctc tgtggcggca ggattggacg aaatcataat
     7501 cggcaggata ttggcaggga aatacaaaat aaccgctgcc gtcagaaacg ccgacgaaat
     7561 actcagactt ttcggccgtc ggcggtacag ttccgcgccg cacaccccgc agggggattc
     7621 ggcactgtcg cggaaataca ggcagcggct gcaacaggtt ttgccttccg atgccgtctg
     7681 aaccgcatta tcccccgtca gccgcccgat ttgaaaatac acccaatgct ggggaaccga
     7741 taccgaagtc cgaatcagca taaccgacag cgcgaacatc agataaaacg ccgacccgaa
     7801 gcgaacctct gccacagacg agagcttgat atacgccacc aaagtggaaa caaaaaacac
     7861 atccaccatc atcgcctgcc tcaagcgcac catcacacgc gttgccaaac gcagcgcagg
     7921 atacgcctgt ttccgtatca gcgcggcata gacatacagg cacagcagca gaaacagaac
     7981 cggcgcgccg aaagtcagca caaacatcac ttcggccaaa aaaccataat cctgaaacac
     8041 catcaggcgt accatttcgg gtagcgaaag gacggatgcc gcacccggta tcccgacctc
     8101 gatatacgtc ataccgtaag caaacgccat caaaatcagc gaagccgccg cataggcggg
     8161 cgggccggaa aaaggatgcc tgcccaccct gaagagtttg tgtccgcaac ggggacagaa
     8221 cgccgcctct cccctgtcca accggggcac atccgcgcgg ccgccgcatt ccggacaatc
     8281 taccgtatgt ggcggcaggg cttcgtcgcg gcagttgccg cgaaggctgt gggggatatt
     8341 ttcggcaaac ggcttcatcg ggaaagtggc aaatataagt ggcggcatta taaaggaaaa
     8401 aaggcgatac acccaatcag gatgcaaaac cggcaggttc ggcagtatga acaaaccatt
     8461 ggtgtccggc aaaaatattt tttcgagcgg ttgtccgccg actgccgaac ccatttgata
     8521 aaatcccgat tctgtaaaga atagtaaaat acctgcttaa aaacatcacg caaatgatat
     8581 tttttccaaa aatatgtgat aataaatttc gtttatgatt ctttattatt tttatagtgg
     8641 attaacaaaa atcaggacaa ggcggcgaag ccgcagacag tacaaatagt acggaaccga
     8701 ctcacttggt gcttcagcac cttagagaat cggtctcttt gagctaaggc gaggcaacgc
     8761 cgtactggtt tttgttaatc cactatataa tccactatat atgcgggcaa gtgcggattt
     8821 tgcccgcccc gcatccttat cccttaccga caaaggaaaa cttatgagtg aaaccgaaaa
     8881 tcaagccctg acgtttgcca aacgtctgaa ggcggatacc acggcggttc acgacagcgt
     8941 ggataatctc gttatgtctg tccaaccgtt tgtcagcaaa gaaaactaca tcaaattttt
     9001 gaaactccaa tccgttttcc acaaggctgt cgaccacatc tataaagatg ccgaattaaa
     9061 caaagccatt cccgagctgg aatacatggc gcgatacgat gccgtaacgc aagaccttgc
     9121 agatttgggt gacaaacctt acgaatacgg caaaccgctg ccgcatgaaa ccggcaacaa
     9181 agcaatcggc tggctttatt gcgccgaagg atccaatttg ggcgcggcat ttttgttcaa
     9241 acacgcccaa aaactcgatt acaacggcga acacggcgcg cgccacctcg caccccatcc
     9301 cgacgggcgc ggcaaacact ggcgcgcctt cgtcgagcat ctgaacgctt tgaacctgac
     9361 tcccgaagcc gaagcggaag ccatccaagg cgcgcgcgaa gcctttgcat tctacaaagt
     9421 cgtgttgcgc gaaaccttcg gcttggcagc cgatgccgaa gcaccggaag gaatgatgcc
     9481 gcacaggcac taaaaaataa tcgaaccaaa taaacaaggt ctcggcatag ctgtttgcag
     9541 ggacctttaa ttacacggcg cggctttgtt tacatggatt actgtcttat taaatattaa
     9601 tgattatcat aaaatctatt attcgctaac cgatggatga acaatccata catcttgagt
     9661 tgataatatg aaaccattac aaatgctccc tatcgccgcg ctggtcggca gtattttcgg
     9721 caatccggtc ttggcagcgg atgaagctgc aattgaaacc acacccgtta aggcagagat
     9781 aaaagcagtg cgcgttaaag gtaagcacaa tgcatctacc actgtggaac gagtaaaggc
     9841 taaaaccatt caagagcaaa tgattcggga tacacgcgat ttggtgcgtt attcatcaga
     9901 tgtcggtgta tccgatgatg gtcgccgtat gaaaggcttt gccatgcgcg gggtggaaga
     9961 caaccgtgtc ggtatcagta tcgacggcgt ggcattgccc agttcggaag aaaattcact
    10021 ttatgcacgt tacggcaact tcaataattc ccgtttaagc atcgataccg aattggttaa
    10081 gggtgtggat attacgaaag gtgcggattc atttgaaagc ggcagcggct ctttgggtgg
    10141 taatgtgaac taccgcacgc ttgatgcacg ggatattgtt ttgccggaac aaaatttcgg
    10201 tgcacttctt cgcagtggtt atgcaagtaa aaacagagag tgggcgaata ccgcaggttt
    10261 cggctatgcg ggcaatgttt ttgatgccgt ggttttgtat tcccgccgac acgggcatga
    10321 aatgaaaagc gggggggatg tcgttgattt tgtagggttt ggtgaattgg ataagcagga
    10381 tcaggcagag cgcggatcgg cacgcattca tccagatccg tccaaacaca ataaccacag
    10441 ttatttggtg aaattaggct ggcaaccggc cgactctcac cgcttcggtg tttctgttaa
    10501 tggacaaaat aacagcaatt acacttatga aaaaacttac tccctgacaa gttattggcg
    10561 ggaggcagac gatgtgcaga aacgcaccaa tattaacctg aaccacgagt ggacacctgc
    10621 atcttccgtc ctttctttgt tacgtacgga tttggactat cagaaaaccc gcaatggggc
    10681 gataaactat aaaggtgata tggccgtacc ggagactggc gcacaggtta tcagtatcac
    10741 aacggcttta tggctgatag agacgagcgg aatatggata ccaaatacaa gcgcattacc
    10801 ttccgtttgg atagccggcc tttctcactg tgggcaggtg aacacagatt atcttttaag
    10861 acttttgcca gtcgtcgcga ctttgaaaat gtaaatgatg atttagattt taattcaaca
    10921 ggcaatataa ctgaccgtaa acattacacc attatacgtc cgatgaagac ggatcaaatc
    10981 ggtttttcat tgcaggataa aatcgctttt gacgacaagt tatctgtaaa tgcaggcgtg
    11041 cgctacgact atgagaaggt aaaaccgcag gctttcaagc cagatacgcc ttgtctgagt
    11101 acctgtgtta atgacggtaa tccgtccgca agaagtttta atacatggaa cggcgtttta
    11161 ggtttggact acctctttaa cgatacttgg cgtgcagctt accaaatcaa tacggggcat
    11221 cgcgtgccga cagcatcgga aatgtatttt acttatacca gcccttacgg taattggatt
    11281 gctaacccat cgttgaaagc agagcgcagt ctaaaccaaa ctctgtcact gcgtggaaag
    11341 aatgacaaag gattgctgga ttttagcctg tatcagaccc gttaccgtaa tttcttattt
    11401 gaggaagaaa aaacgtatca ggtgccgaat gagtattata atgaacatag ttgctattat
    11461 aatcctaaat attgtaaccc tacgcttacc gaaatcggcc aacaaatggt caatattgat
    11521 aaagccaggg tgaggggagt tgaatttaaa ggtgagttga acctacatca agtgatgtct
    11581 gtgccggaag gttttaaagt atccggcgca ttgggttata gtaaaggcaa attgtccggt
    11641 gaacgcggca gtttgttgtc catccagccg ctgaagttgg tgcttggatt cgattatgag
    11701 tctcctgatg agcgttgggg tattttctcc cgtgtcagct atatgggcag gaaaaaagcc
    11761 aaagatgccc aagtaattga acaaaagagc tattgcacaa gctataaact cgatccttgg
    11821 acaggtaagg aaacagatga ttgtgctgtt gccttgcagt atcgtgacga taaaatcgac
    11881 ttccgttggt tgaataaagc ggcaactgtt gtggatgtat tcggctacta caaaccggta
    11941 aaacgtatga ctttacgggc gggcgtttat aatctgttta accggaaata ccatacttgg
    12001 gacagcttgc gcggcatcaa tccgagatcg actattaact ctttaagcgt atcgaatact
    12061 aaatcagcaa atcagggtct ggaacgctac tacgcccccg gccgcaacta tgccgtatcg
    12121 ctggaatgga agttttaatc tggtattatt gaattaatcg ccttgttgaa aattaaagcc
    12181 gtccgaattg tgttcaagaa ttcattcgga cggcttttta ccgtaaatct gtgtgatgg
//
LOCUS       DAWEYF010000044        12202 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.044, whole genome shotgun sequence.
ACCESSION   DAWEYF010000044 DAWEYF010000000
VERSION     DAWEYF010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.044"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            207..944
                     /locus_tag="WGN93_000888"
     CDS             207..944
                     /locus_tag="WGN93_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ0226811.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            947..1633
                     /locus_tag="WGN93_000889"
     CDS             947..1633
                     /locus_tag="WGN93_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ0226812.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1792..2655
                     /locus_tag="WGN93_000890"
     CDS             1792..2655
                     /locus_tag="WGN93_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226813.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEHIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2717..3286)
                     /locus_tag="WGN93_000891"
     CDS             complement(2717..3286)
                     /locus_tag="WGN93_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ0226814.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3444..4304
                     /locus_tag="WGN93_000892"
     CDS             3444..4304
                     /locus_tag="WGN93_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ0226815.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTLETFDHI
                     LKQLGIDYRP"
     gene            4439..4777
                     /locus_tag="WGN93_000893"
     CDS             4439..4777
                     /locus_tag="WGN93_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226816.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRNNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5145..5498
                     /locus_tag="WGN93_000894"
     CDS             5145..5498
                     /locus_tag="WGN93_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ0226817.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5488..6354
                     /gene="atpB"
                     /locus_tag="WGN93_000895"
     CDS             5488..6354
                     /gene="atpB"
                     /locus_tag="WGN93_000895"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ0226818.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6411..6647
                     /gene="atpE"
                     /locus_tag="WGN93_000896"
     CDS             6411..6647
                     /gene="atpE"
                     /locus_tag="WGN93_000896"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ0226819.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6718..7188
                     /locus_tag="WGN93_000897"
     CDS             6718..7188
                     /locus_tag="WGN93_000897"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ0226820.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7193..7726
                     /locus_tag="WGN93_000898"
     CDS             7193..7726
                     /locus_tag="WGN93_000898"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ0226821.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKM
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7737..9284
                     /locus_tag="WGN93_000899"
     CDS             7737..9284
                     /locus_tag="WGN93_000899"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ0226822.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9309..10184
                     /gene="atpG"
                     /locus_tag="WGN93_000900"
     CDS             9309..10184
                     /gene="atpG"
                     /locus_tag="WGN93_000900"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ0226823.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10222..11619
                     /gene="atpD"
                     /locus_tag="WGN93_000901"
     CDS             10222..11619
                     /gene="atpD"
                     /locus_tag="WGN93_000901"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ0226824.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVNNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11630..12052
                     /locus_tag="WGN93_000902"
     CDS             11630..12052
                     /locus_tag="WGN93_000902"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ0226825.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         3004 a         3116 c         3147 g         2935 t
ORIGIN      
        1 ttttgttaat ccactatatt gtccgaaatg gttgcccgct tcctgcctta ttgacaaaaa
       61 aacgctttcc cgataatatc ctacgaaaat taacctgccg atttgacaca gcttgcgggc
      121 ataacagcta aagcgttccg acaatttcag ctttatcttc cgcgcccgtt gtgtccgaca
      181 tcgggctttg ttgtatggga aagacaatga ttattttgga caaggtttcc aagcattacc
      241 aaacgcgcga caagacccgt tttgccgctg tcgagccgac cagcctcgaa atccgcgacg
      301 gtgaaatctt cgggctgatg ggttattcgg gtgcaggcaa atccaccctg ttgcgcctga
      361 ttaacctgtt ggaacgtccc gacagcggca aggtcaacgt ctgcggacaa gagctgaccg
      421 cgctcgatgc cgccgcattg cgtcaggctc ggcagaatat cggcatggtg tttcagcagt
      481 tcaacctgtt gaacaaccgc accgtcgccg gcaacgtcgc cttcccattg gaaatcgccg
      541 gatggccgtc tgaaaaaatc aaagcgcgcg ttgccgaatg tctcgaaatc gtcggactga
      601 ccgaacgcgc cggccactat cccgcccagc tttcaggcgg gcagaaacag cgtgtcggca
      661 tcgcccgcgc actcgcgccc aaaccccaag tcatcctcgc cgacgaaccc acttccgccc
      721 tcgaccccgc caccacgcgc agcgtcttgg aatgtttgga agacatcaac aaacgattca
      781 acgtaaccat cgtcatcgta acccacgaaa tgagcgttat cagacgactg tgcgaccgcg
      841 ccgccctgtt ggataaaggc aaagtcgtcg aaatcgtcga agtacgcggc aaccaaatcc
      901 acgcccgatc cgacatcggg cgcgaactga ttcgggagga ctgaatatgg caggcttaac
      961 atttgaacaa accgtttcca acatcatcgg tatgaaaggc gaaatcgtcc gcgcattggg
     1021 cgaaaccttc gtaatggtcg gtttgtccac cacattcgcc gtcgttttcg gcacgttgct
     1081 gggcgtgttg ctcttcgtaa cttccagccg ccaactgcat tacaacaagc cggtgaactt
     1141 cctgctcgac aacctcgtca acctcatgcg cgccttcccc ttcgtcattt tgatgattgc
     1201 gatgataccc gccacacgcg ccatcgtcgg cagcaccatc ggcccggttg ccgcctcgct
     1261 ggtgttgagc gtgtcgggat tgttttattt tgcccgactg gtggaacaaa acctgcgcga
     1321 agtccccaaa ggcgtaattg aagccgccgc cgcgatgggt gcgccgccgg ttgccatcgt
     1381 ccgcaaagtc ctcttaaacg aagcgcgcgc gggcatggtt tccagcatta ccgtgcttgc
     1441 catcgggctt ttgtcataca gcgcggcggc agggatgata ggcggcggcg gcttgggcga
     1501 cctcgccatc cgctacggct actaccgcta ccaaaccgaa gtcatcgtct tcatcgtcgc
     1561 cctcctcgtg ctgctggtca tcctgattca aagcaccggc aacgcattgg cgcggaaatt
     1621 ggataaacgt taaacccgaa tgccgtctga acgccaaaac ccccaccgct atccgaaaaa
     1681 tgctataaaa tccccctgtt cgcggcaaat gccgtctgaa cgccgaatct ggacggcagg
     1741 actccctgcc cgtcattttt gtttgaaact gccacaacat caggagaaaa tatgaaaacc
     1801 ttcttcaaaa ccctttccgc cgccgcactc gcgctcatcc tcgccgcctg cggcggtcaa
     1861 aaagacagcg cgcccgccgc atccgcttct gccgccgccg acaacggcgc ggagaaaaaa
     1921 gaaatcgtct tcggcacgac cgtcggcgac ttcggcgata tggtcaaaga acacatccaa
     1981 cccgagctgg agaaaaaagg ctacaccgtc aaactggtcg agtttaccga ctatgtgcgc
     2041 ccgaatctgg cattggctga gggcgagttg gacatcaacg tcttccaaca caaaccctat
     2101 cttgacgact tcaaaaaaga acacaatctg gacatcaccg aagtcttcca agtgccgacc
     2161 gcgcctttgg gactgtaccc gggcaagctg aaatcgctgg aagaagtcaa agacggcagc
     2221 accgtatccg cgcccaacga cccgtccaac ttcgcccgcg tcttggtgat gctcgacgaa
     2281 ctgggttgga tcaaactcaa agacggcatc aatccgctga ccgcatccaa agcggacatt
     2341 gccgaaaacc tgaaaaacat caaaatcgtc gagcttgaag ccgcgcaact gccgcgtagc
     2401 cgcgccgacg tggattttgc cgtcgtcaac ggcaactacg ccataagcag cggcatgaag
     2461 ctgaccgaag ccctgttcca agaaccgagc tttgcctatg tcaactggtc tgccgtcaaa
     2521 accgccgaca aagacagcca atggcttaaa gacgtaaccg aggcctataa ctccgacgcg
     2581 ttcaaagcct acgcgcacaa acgcttcgag ggctacaaat cccctgccgc atggaatgaa
     2641 ggcgcagcca aataaggcag tcgtataaaa tgatgccgtc tgaaccgtat ccgtgttcag
     2701 acggcatttt tgtcctttaa tccgccattc cctgccattc cgccgaatcc ggcgtatcga
     2761 ttccgaacag cgacaaagcg tgtgcaacac tgtgcgccac tatgtcgtcc gccgtctgcg
     2821 gtttgcggta catcgcagga acagggggaa acaccacgcc gcccatttcc gttacccgct
     2881 tcatattgtc caaatgggca aggttcagcg gcgtttcgcg caccatcagc accagccgcc
     2941 gcctttcctt caaaaccaca tccgccgcac gcgtcaagag gttgtcgccg aagccgtgcg
     3001 cgaccgaggc aagcgtccgc atcgaacagg gggcgaccag catcccgtcc gttttaaacg
     3061 taccgctggc aatgcacgcc ccgatattgc cgatcggatg cacgaagtcc gccaaggcat
     3121 atacctcatc tctcgcataa gccgtttccg aagcgcgcgc catctccgca cctttcgata
     3181 ccacaaggtg cgtttcgata tcttgcgcgc gtaaaagttc caaagccttc acgccgtatt
     3241 ggaaaccgct cgccccactg atgccgatta tcaaacgccg taccatcatc cgcctttccc
     3301 ataaaaccgc ctgcaacggc aaaccggcta ttatagtgaa aaaacagaaa tccgataaat
     3361 acggatacaa attgtcggca acacccaata tccgataaaa tatccgattt aacatcctat
     3421 ctgaataggc acgggagggc ggtatggcaa aagtaaaagg cggattgggg cgcggtttgg
     3481 attcgctgct cgccaacggc gcagacaaca gcagcggcga ccgattgacc acggttgcgg
     3541 ttaaagatat ccggcccggc cgctatcagg cgcgtgttca aatcgatgac gaagccttgc
     3601 aggagctggc ggattcgatt aaagcacagg gagtgataca gcccgtcatc gtgcgcgaac
     3661 acggactgtc ccgatacgaa ctgattgcgg gggagcggcg ttggcgtgcc gcacagattg
     3721 ccggcctgac cgaaatcccc gccgttatca aaaccatcag cgacgaaacc gcgttggcaa
     3781 tgggtttgat cgaaaacctc cagcgcgaaa acctcaaccc catcgaagaa gcacaaggct
     3841 tgaaacgcct tgccgacgag ttcggactga cccacgaaac catcgcccaa gccgtcggta
     3901 aaagccgaag cgcgatttcc aacagcctgc gccttttaag cctgcccgaa cccgtgcagg
     3961 aaatgcttta ccaacgccgc ctcgaaatgg ggcacgcccg cgcactgctg accctgcccg
     4021 tcgtcgaaca gctcgaattg gcgcaaaagg ccgtcaaaaa cggctggtcg gtgcgcgaag
     4081 tcgaacgccg cagccaagcc gcccttcaaa acaaacgtcc cgagcccaaa aagactgccg
     4141 ccgccgacat cggccgcctg aatgatttgc tgactgaaaa actgggtgtc aacgccgaaa
     4201 tcaaaaccgc caaccataaa aaaggcaaaa tcatcctgca tttcgacacg ctcgaaacct
     4261 tcgaccatat cttgaagcag ttgggcatag attaccgacc ttaattttgc gggatatacc
     4321 gtctgaaata tagagaatag ctttccagat tttaagtggg aaatataatt ctattgacat
     4381 ttttctgctt cacgtaagaa tcgttttcct gttttcattt ttaattttcg aggaaattat
     4441 gaacacacgc atcatcgttt cggctgcgtt cgttgcgttg gcattagcag gttgcggctc
     4501 aatcaataat gtaaccgttt ccgaccagaa acttcaggaa cgtgccgcgt ttgccttggg
     4561 cgtcagccca aatgccgtaa aaatcagcaa ccgcaacaat gaaggcatac gcatcaactt
     4621 taccgcaact gtgggtaagc gcgtgagcca atgctatgtt accagtgtaa tcagcacaat
     4681 cggcgttacc acttccgatg caatttgttt gggaggcgga acgcacaaag gcaaaagtca
     4741 atgcaatgct ttgcttaaag cggcaggccg ttgctaatcc tttattcgga aaaggtcgtc
     4801 tgaaaatatt ttcagacgac cttttattta ttgagcaaat tccccaaact gccgacaatc
     4861 cgaccgataa actgctacaa tttcgcgttg attttttatt atttccacgt aaagcaaaca
     4921 aatcacgtaa gaacattaaa aatgtaaaga aattgcggac aaactcctta atatcctgta
     4981 attatatgta atgtgtgtta gaatgacacc tgtcgccgtt attcaggcgg cgagcgcggc
     5041 ggattgggat acgttgtttc acaaagatta actgtcgctt gacgtaataa ggcttctaaa
     5101 ttatattagc cgcgccccaa atccgaggcg gaaacattcc ctttatgaag cagattatca
     5161 tcctacaatc cgccgtattg tccatatgcg ccgcagttgc ctttgctgta tggggttttg
     5221 ccggattcct ttcggcggtc ggtggcggtt tgtcctacct gcttcccacg tttgttgcag
     5281 ttttactttt aaaacttttc aggggaaacc ccttcctgca aagcaggatg ttcgtcttcg
     5341 gagagatttt aaaagtagtg ctgtcgctgt tgtccatgct cgccgtattt gctgtatggc
     5401 atcaatcgtt ggtgttcgcc ccgtttctga tggggctgct cggtgtcagc catttggttt
     5461 ttttagtatt gttgagagtg aaagattatg gcaggtgaaa ccattaccgc tgccgactac
     5521 atcaagcacc acttgcagag cttgaccagt ttgtcggatg ttactcaggg tcagggactg
     5581 aaaaacattg ctgatttttc gtttattaac cttgatgccg tcttttttgc cgtcctgttg
     5641 ggcgtaatcg gcagcttcct gttgtggcgc ggtgcgaaaa aagcaacggc aggcgttccc
     5701 ggacgtttcc aggctgccgt ggaaatcttg tttgagtttg tggacgatat gtgtaagagc
     5761 atcattcaca acgaaaagtc tagaaaagcc gtcgcgccgt tgggtctgac gctgtttgtc
     5821 tggattttcc tgatgaacgc gatggatatg ctgccggtcg atttgctgcc gatggtatgg
     5881 cagggcatta ccggcaacca tcacgccctg ttgcgcgtcg taccgactgc cgatttgaac
     5941 accactttgg cactcgctgt cggcgtgttg ctgatttgta tctattacaa catcaaaatc
     6001 aaaggattgg gtggctggtt tcacgagttg ttcagcgcgc cgttcggtgc aaaactcgca
     6061 cctgcgaact ttctgttgaa tttggtcgag tttctttcta aaaccgtatc ccacggtatg
     6121 cggttgttcg gcaatatgta tgcgggcgag ttggtattct tgctgatagc cttgcttggc
     6181 ggtgcttggg cggcttccgg cagcgtcgaa gtcatggatc cgattctgtt tgtattccac
     6241 attattgccg gtttggcatg ggcgattttc catattttgg tgattaccct gcaggcgttt
     6301 attttcatgg cgttggcgtt cgtttatatc ggacaggcac atgatgcgca ctgattttcc
     6361 taagtagttt gtttttgtag tttaaccttt gtttctttaa ggagtttaaa atgggtttga
     6421 ttgctatcgc atgtggtttg atcgttgcat tgggtgcatt gggtgcctct atcggtatcg
     6481 caatggtcgg ttctaaatat ttggagtctt ctgcccgtca gcccgaactg atcggtccgc
     6541 tgcaaaccaa actattcctg attgccggtt tgattgatgc cgcattcttg attggtgtcg
     6601 ccattgcact gctgttcgcc ttcgttaacc cgtttgcagg tgcataatca ggacggattc
     6661 gtccgttccg tacaggcgca gcctgtttga ttaaccccag tacgaaggtt aagtaacgtg
     6721 aatatcaatg caacattatt cgctcaaatc atcgtctttt tcggtttggt atggtttacc
     6781 atgaaattcg tgtggccgcc gattgcaaaa gctttggatg agcgtgccgc aaaagtcgcc
     6841 gaaggcttgg ctgccgccga gcgtggtaaa agcgattttg agcaggctga aaaaaaggtt
     6901 gcagaactct tggcagaagg gcgtaatcag gtttccgaaa tggttgccaa cgccgaaaaa
     6961 cgtgccgcca aaattgtcga agaagccaaa gaacaggctt cttccgaggc ggcgcgcatt
     7021 gcagctcagg caaaggccga tgtggagcag gaattgttcc gcgcacgcga atccctgcgc
     7081 gagcaggttg ccgtgttggc tgtcaaaggt gccgaatcta ttttgcgcag cgaagtcgat
     7141 gcttccaaac acgcaaaact gctcgatacc ctgaaacagg agctgtaatc ttatggcaga
     7201 gttcgcaacg attgccagac cttatgcaaa ggcattgttc ggtctggctc aggaaaaaaa
     7261 ccaaattgag tcttggttgg gcggactgga aaaacttgcg gcggttgttc aggaagggaa
     7321 gatggcttca ttgattgacc gtcctgaaac gaatgcttca gaaaaagcag atatcctcat
     7381 cgatttggtc ggtttgaaag acaaggagtt gaaaaacttt gttatcgtct tggccgggca
     7441 gaaacgtttg tcgatattgc cggaagtata tgctcaatat caagacttga ccttatcatt
     7501 caaccatatc aaatctgccg tcatttacag tgcctatccg ttgaccgaca aacaggtcgg
     7561 cgagttggcg caaatgctga ataagcgttt cgacagcgag ctgaaaatct ctgtcgaaat
     7621 cgaaccggag ctgattggcg gcataaaagt tgaagtgggt gatcaggttt tggatttgtc
     7681 tgtacaaggc aaattgagtg ccttgtacac gactatgacg aattaggaga gttttcatgc
     7741 agcttaatcc tgctgaaatt agcgatttga ttaaagccaa gatcgaaaat ctgtctgtaa
     7801 atgccgaagt gcgtactcgt ggtacggtga tttcggtaac tgacggtatc gttcgcatcc
     7861 atggtttgtc agatgcaatg caaggtgaga tgctcgaatt cccgggtaac actttcggct
     7921 tggcgatgaa cctggagcgc gactccgtcg gcgccgtagt gttgggcgag tacgaacata
     7981 ttaaagaagg cgacacggtt acctgtaccg gtcgtatctt ggaagtgccg gtcggacgcg
     8041 aactggtcgg acgcgtcgtt gatgcattgg gtcggcctat cgacggcaaa ggcccgatta
     8101 atacaacttt gaccgcccct atcgaaaaaa tcgcaccggg cgtgattgcg cgcaaatcgg
     8161 ttgaccagcc gatgcaaacc ggtctgaagg cgattgactc tatggttcct gtcggtcgcg
     8221 gtcagcgtga gttgattatt ggcgaccgtc aaaccggtaa aacggccgta gcattggatg
     8281 ccatcgtcaa ccaaaaaggt acgggtgtta tctgtatcta tgtcgctatc ggtcaaaaag
     8341 catcttctat tgccaacgtg gtccgcaaat tggaagagca tggcgcgatg gagcatacca
     8401 tcgtggttgc tgcaactgca tctgaagcgg cggcattgca atatatcgca ccttactccg
     8461 gttgtacgat gggtgaattc ttccgcgatc gtggcgaaga tgccttgatt gtttatgacg
     8521 atttgtccaa acaggctgtg gcttaccgtc aaatttccct gcttttgcgc cgtccgcccg
     8581 gccgcgaagc ctatcccggc gatgtgttct acctgcactc ccgtctgttg gaacgtgcag
     8641 cacgtgtcaa tgaacacgaa gtggagaaat tgaccaacgg cgaagtaaaa ggcaaaaccg
     8701 gttctctgac cgcgttgccg attatcgaaa cccaagcggg cgacgtatct gctttcgttc
     8761 cgactaacgt catttcgatt accgacggtc agattttctt ggaaaccgac ctcttcaacg
     8821 ccggtatccg tcctgcaatc aatgccggta tttccgtatc ccgcgtaggc ggtgctgcac
     8881 aaaccaaagt gattaaaaag ctgggtggcg gtatccgttt ggcgttggcg caatatcgtg
     8941 aattggcggc gttctcgcaa tttgcatccg atttggatga agctacgcgc aaacaattgg
     9001 agcatggcga agtcgtaacc gaactgatga aacagaaaca gttcagtacg ttgaatacgg
     9061 ctgaaatggc tttgaccctt tgggcaatca acaacggttc gtattctgat gttccggttg
     9121 ccaaagctct ggcttttgaa tctgaatttt tgagctttgt ccgtacccaa catccggaag
     9181 ttttggaagc cgtcaatgct tcaggtgcaa tgtccgacga gagcgagaaa acgcttgaag
     9241 cagccatgaa atccttcaaa tcttcttacg cctatcaggc ataaggcttg aagtgaaagg
     9301 agtctgaaat ggcagtagga aaagagattc tcaccaaaat ccgcagtgtt cagaataccc
     9361 aaaagatcac taaagcgatg cagatggtgt caacctctaa aatgcggaag actcaggaac
     9421 ggatgcgttt ggcgcgtccg tatgccgaaa aagtgcgtat ggtgatgagc catcttgcgc
     9481 aaaccaatac cgatcatggt attccgttac tggaatctca tcgggaaatc agacgtgtcg
     9541 gttttatttt gattacgtct gataagggtt tgtgtggcgg tttgaacgcc aacgtgctga
     9601 aaaagttttt ggcacaagtt caagagtatc ggaatcaagg tattgaagag gaaatcgtat
     9661 gccttggcag taaaggtctg atggcgtgtc agagcattgg tctgaatgtg gttgccagtg
     9721 ccgtaaattt gggcgatacc ccaaaaatgg aaatgctgct cggacctttg acagaactct
     9781 tccaacggta tgagaaacat gaaattgaca gaatccatct ggtgtattcg ggttttgtca
     9841 ataccatgcg tcaagaaccg agaatggaag tattgctgcc tatcggtgag aacgtgattg
     9901 gcgattcagc tcccaaatca ccgttcagct gggaataccg ctacgaaccg actgcacttg
     9961 cagtgttgga atatctggtt cgccgctatt tagagtctgt ggtttatcag gcgttgagcg
    10021 acaatatggc atccgaacag gcagcccgca tggttgccat gaaagctgca acagacaatg
    10081 caggcaatgc catcaaagag ttgcgtttgg tatataacaa atcgcgtcaa gctgcgatta
    10141 ccacggaatt gtcagaaatt gtagcaggtg cggcggctgt ctgatgccgt ctgaatcctg
    10201 tacggaaatt aggatacgat aatgagccaa ggcaaaatcg tacaaattat cggtgcggtt
    10261 gttgacgtgg aatttccacg cgacatgatt ccgcgcgttt acgacgcttt gaaattagac
    10321 gaaaacggtc tgactttgga agtccaacag cttttgggcg acggcgtagt ccgtaccatt
    10381 gcgatgggca gctcggacgg tttgaaacgc ggcatgactg tgaacaatac cggtgcgccc
    10441 attactgtgc cggtaggtaa aggtacgttg ggacgcattg tcgatgtatt gggaacgcct
    10501 gttgacgaag caggtccgat cgataccgac aagagccgtg ccatccacca agccgcccct
    10561 aagtttgacg aactgtcttc cacaaccgaa ttgctcgaaa cgggcattaa agtgattgac
    10621 ttgctgtgtc cgtttgccaa aggcggtaaa gtaggtctgt tcggcggtgc cggtgtgggc
    10681 aaaaccgtga acatgatgga attgatcaac aacatcgcca aagcgcacag cggcttgtcc
    10741 gtgttcgcag gcgtgggtga gcgtacccgc gaaggtaacg acttctacca cgagatgaaa
    10801 gattccaacg tattggataa agtggcaatg gtttacggtc agatgaacga acctccgggc
    10861 aaccgtttgc gcgtcgcatt gaccggtttg accatggcgg aatacttccg tgacgaaaaa
    10921 gacgaaaacg gcaaaggccg cgacgtattg ttcttcgtgg acaacatcta ccgttacact
    10981 ctggccggta ccgaagtatc cgcattgttg ggccgtatgc cgtctgcagt gggctaccaa
    11041 ccgacattgg cagaagaaat gggtcgtttg caggagcgta ttacctctac ccaaaccggt
    11101 tctattactt ccatccaagc cgtatatgta cctgcggacg atttgaccga cccgtctccg
    11161 gcaacaacgt tcgcccactt ggacgcaacc gtcgtattga gccgcgatat tgcctctttg
    11221 ggtatttacc cggcagtcga tccgcttgat tccacttcgc gccaattgga tccgatggtc
    11281 ttgggtcaag aacactacga cgtggcgcgc ggcgtacagt ccaccctgca gaaatacaaa
    11341 gaattgcgcg acatcatcgc catcttgggt atggacgaat tgtctgatga agacaaactg
    11401 accgtaatgc gtgcgcgtaa aatccaacgc ttcctgtccc aaccgttcca cgttgccgaa
    11461 gtgtttacag gttctccggg taaatatgtc gccctgcgcg ataccattgc cggcttcaaa
    11521 gccatcttga acggcgaata cgatcatctg cccgagcagg cattctatat ggtcggcagc
    11581 atcgaagaag cggttgagaa agcgaaaacc ttaaactgag gaggtcggca tgagcatcat
    11641 gcaagttgag gtggtcagta gcgagcaaaa catctattcg ggcgaagcca gctttgtagt
    11701 ggttccgacc gttcaaggtg agcttggtat ttacccgcga cacgagccga ttatgagttt
    11761 ggtgcggccg ggggctttgc gtttgaccgt tccgggcgag gataaagagg ttttggttgc
    11821 tgtttccggc ggtgttttgg aagtacagcc tgataaagta actgtcttgg cggatgttgc
    11881 cgtccgcagt gcggagatgg atcaggcacg tgcggaagag gcgaaaaaag ccgcagaagc
    11941 gggcatttcc caagctaaag acgataaggc tttggcggaa gcacataaag cattggctgc
    12001 tgcgattgca cagctcaaaa ctttggacta tatccgttcg cacaagaaat aaacttgttt
    12061 ggtttggaaa agcacgaccg tttggtcgtg ctttttattt tccggattta aattaaagac
    12121 tgtgtttgga tatggcgttg gcaggcatag cctgctttaa ggtattcaat agggcagcct
    12181 gccgcctaac cgaaacatat ag
//
LOCUS       DAWEYF010000045        12189 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.045, whole genome shotgun sequence.
ACCESSION   DAWEYF010000045 DAWEYF010000000
VERSION     DAWEYF010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12189
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.045"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            596..1771
                     /locus_tag="WGN93_000903"
     CDS             596..1771
                     /locus_tag="WGN93_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ0226826.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKYVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATVGR"
     gene            complement(1831..2379)
                     /locus_tag="WGN93_000904"
     CDS             complement(1831..2379)
                     /locus_tag="WGN93_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ0226827.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNTESK"
     gene            complement(2382..3878)
                     /gene="ccoG"
                     /locus_tag="WGN93_000905"
     CDS             complement(2382..3878)
                     /gene="ccoG"
                     /locus_tag="WGN93_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ0226828.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            4406..6385
                     /gene="tkt"
                     /locus_tag="WGN93_000906"
     CDS             4406..6385
                     /gene="tkt"
                     /locus_tag="WGN93_000906"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ0226829.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEAEWNELFAQYQAKYPTEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKALPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAIKAAD
                     HPSCLIFSRQNLKFQARNEQQLNDIKRGGYVISEAQGNAQAVIIATGSEVELALEAQK
                     VLAEQGIAVRVVSMPSTNVFDRQDAAYQTAVLPEGLPRISVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            6526..7914
                     /gene="fumC"
                     /locus_tag="WGN93_000907"
     CDS             6526..7914
                     /gene="fumC"
                     /locus_tag="WGN93_000907"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ0226830.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7979..8902)
                     /locus_tag="WGN93_000908"
     CDS             complement(7979..8902)
                     /locus_tag="WGN93_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ0226831.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKWRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALIVVGGAVTAAVGDRLFKRR"
     gene            9074..9214
                     /locus_tag="WGN93_000909"
     CDS             9074..9214
                     /locus_tag="WGN93_000909"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226832.1"
                     /translation="MPSENSGDVRQASLPQNARTAQSQRSAQRKGRQQAGSDAKKRNP
                     AP"
     gene            complement(9274..9798)
                     /locus_tag="WGN93_000910"
     CDS             complement(9274..9798)
                     /locus_tag="WGN93_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ0226833.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
     gene            complement(9801..11183)
                     /locus_tag="WGN93_000911"
     CDS             complement(9801..11183)
                     /locus_tag="WGN93_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0226834.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQVNQDGLQRALLQLEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            complement(11294..11917)
                     /locus_tag="WGN93_000912"
     CDS             complement(11294..11917)
                     /locus_tag="WGN93_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ0226835.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
BASE COUNT         2987 a         3536 c         3033 g         2633 t
ORIGIN      
        1 ttccaaatcc ccgagattat ccctcgggga ttttttattg tctcggcaac tcgttaccat
       61 atctttacct acccccttca tcagaatctc agacacaatc gaatcatatt caaacctttg
      121 ccgtgcaaac cgatatccca taaccggatg cggtgtccgt ccaacatttt acccgattga
      181 aacgcctgat atatcgcacc ccatcaaagg ggcattgctt ttcttaacaa tcccctttga
      241 cagggctttt ttatgccatc atcaaattta tagtggatta actttaaacc agtacggcgt
      301 tgcctcgcct tagctcaaag agaacgattc tctaaggtgc tggagcacca agtgaatcgg
      361 ctccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaattcac
      421 tataatattt tctctcccga ttgaaacagg cgtaacagaa tatgcccgaa gctccggctg
      481 ctttcttgtt taccgccgcg atatttagag tataatacca aatttgagca atagttctaa
      541 aacagttaga accatttttc atgagcctga ctgattcgta cactcggaga aactgatgca
      601 gaatattttt gaccctttgg ttattcgtgg aaaatccctt acccccatcg tgcaaggcgg
      661 tatgggggtc ggtgtttccg catcgggttt atccagcgcg gtggcacgtg aaaacggtat
      721 cggaacgatt gccagtgtgg atttgcgcca ccttcacgaa gacctactcg ccgaatccca
      781 aatcaatccg agtgaagaga aatatacgtc tttgaactgt accgcattgg acagggaaat
      841 ccaaaaagcc aaaagtgctt cagagggaaa agggctgatt gcggtcaacg tgatgaaggc
      901 ggtcaaagac cacgccgcat atgtccgcca ggcttgcgaa tcaggggcgg atgcggttgt
      961 aatgggtgcc ggtctgcctt tagacctgcc ggaaatgacc gagggctatc ataaatatgt
     1021 cgcgctgctg ccgattctgt ccgaatcgcg cggtattaat atcgttttga aacgttggat
     1081 gaaaaaaggc atattgcccg atgcgattgt agtcgaacat cctgcccacg cggccggaca
     1141 tttgggtgca tcaaccgttg aaggcgtaaa cgatgccaag ttcgacttca aacgcgtgat
     1201 tgaggaaacg tttgaagttt tcaaaagttt agggctggaa agcgaaaaaa tcccgcttat
     1261 tcttgcggga ggcatggcaa attttgaaaa agtcaaaacc gccctaaaga actggggagc
     1321 atccgccgtt caaatcggta cggcttttgc cgttaccgaa gaaggagatg cacaccttaa
     1381 cttcaaaaaa acgctcgccg gtgcggaaac tgaaaaagta gtcgaattta tgtctgttgc
     1441 cggtttgccg gcgcgcggtg tccgcaccaa attcctagac agctacatca agcgtgaaag
     1501 caaacttcag acaaacgcca aagccgaccc gcgccgctgt acccaaggtt taaactgcct
     1561 aaccagttgc ggtctgcgcg acgggctttc caaagccgga caattctgca ttgatatcca
     1621 gcttgccgcc gcattccgtg gagaagtaga taaaggcctg ttcttcagag gtaaagaccc
     1681 gctgcccttc ggcaatgcca tccgcaccgt ccgcgagacg atacaatatc tgctgacggg
     1741 gagcgaacct gttgcaacag taggacgctg atgttaaaac agccgatacc gtagcaaaat
     1801 gccgtctgaa aattttcaga cggcatctct ttatttgctt tcagtattat tgaaaagttt
     1861 gtccatcggg gtcaaatcga ccgcattgcc ttggctggta atccatttgt tctcgacgcg
     1921 ccacacgcct gccgcgtcct ccacgcgcac ataccagtgg ttggtcggcg aaagggtttt
     1981 gaacaccgcc tcatattccg ccctgccgtt ctgcgcgctg ccgacgggct tgagggcgac
     2041 ggtttgatcg tccgccttgc gggtcgggtg catcagcagc aggttcaaag gctgtttgcc
     2101 gtcaaactcg ccgccgacaa acacttttgc cgcattcata tcaggggaaa tgagaacctg
     2161 caccccgata tgccgtctga cggcttcttc atcccgatga agctggatgt cgatatgctt
     2221 gccgtcttta taataatcgt ccgtaaccaa atctgtcgcg tgctgctgcg cgacaaaaaa
     2281 catagcgacg ctggcgatga cgacaaaaat cggccccgcc atcaagatcc acggccagac
     2341 gtgtttgtac caaggtttga ttggagtgtt ttgagacacg gttattctcc gataaaggtt
     2401 gcatcttctt ccaagacgac cggcttgccg tcgggcgcgc cgctttcgcg gtattggaag
     2461 gtaaattcga tagggtggct gcctttgtcc gcgtattccg gaatggtgga cacttggacg
     2521 ggaagggtta ccgtttcgcg cggggcaacc ttgataccgc cttcgggcag cccggtcagg
     2581 gcgatttcgt caaagccttt gacacttgcg gtaatgagct gttctttttc acttttgttg
     2641 atgatacgca ggctgtatgc gttttccagc cagcctttgg cgttttcgcg caccagtacg
     2701 ccacggtctt tcaaaatatc gacctcgacc attttgcgcg tggacaaacc ggccaggaag
     2761 gcaatgataa ctaacgccaa caccgcgccg taacctgcca cgcgcggtct gagcagccgt
     2821 tttttaatgt ctttttcaga atattcgtgt tccagcgcgc tttcggtcgt ataacggatt
     2881 aatccgcgcg gatagcccat tttgtccata atctcatcgc acgcgtcgat acaggcggcg
     2941 cagccgatac attggtattg cagaccgttg cggatgtcga tgccgacggg gcagacttgg
     3001 acgcacatcg cacagttgat gcagtcgccc aaacccgcct cttccttatt gaccgttttc
     3061 ttgcgcgcgc cgcgcggttc gccgcgttcc gcgtcataag aaacaatcag cgtgtccttg
     3121 tcgaacatcg cgctttggaa acgtgcatac ggacacatat gcaggcatac tttttcgcgc
     3181 ataatgtggg cgaagaagaa ggtcataaag ccgtaaaacg ctgtggcaaa catcgcgccg
     3241 ccgcctgctg ctccagtgaa taaatcggga acgaactggc ggatagggac aaaccagcct
     3301 gcaaacgtga tgcccgtcca cgcgcagaca aggaaaatca gcaggtattt ggtggctttg
     3361 atgcggattt tagtgaaatt ccacggcgat ttttccagtt tcagccgttt gtttctatcg
     3421 ccttcgacca ggttgtcgat ccacagcata atttcggtgt aaaccgtttg cgggcaggaa
     3481 tagccgcacc acagtcgccc ggcaatcgtc gtccaccaaa acagcccgaa ggcgcaaatc
     3541 atcagcagca aggcaaggta aatcaaatcg cccaccccca acgacaatcc gaaaatgaag
     3601 aaatgccgtt cggggatatt gaaaacgaca gcctgcctgc cgctccagtt gaaccacgga
     3661 atgacgtaaa acacaaactg cgtcgccaat acggcggcga tacgcagttt ggcgaaccgt
     3721 ccttccgcct ttttgggatg gatgcgttcg ccttcgggat ggatttgaat cacgctggct
     3781 cgcggatcga atgttttttt tgctttcggc gcggcttttg tttgttcgga cgtgccgatt
     3841 ccggatgccg gactgccggc ttggttttcc gtggtcattc tgcattcctt agatttttga
     3901 ttgatggttt gcccgttacc gccgccgttt gcttttcaga cgtcattttt cttgtttttt
     3961 aaggcgttgt gtttcaagtt ttgagaaaat ccgtttttcc caaaatatat ttccgctatt
     4021 gtacaacttt atgcgccgtc tggatgtatg gggcggatac atttcccatc cgcatcaaaa
     4081 cgcctggatt ttaccttacc gcccgaacaa aatccgaata cggttaaaaa aaaagactaa
     4141 aaaaaccgac acccccatat cggcagaacc gacggcgcaa gctcataaac aaacgctatc
     4201 gacaatccgg cacacaatct ataacatttt atttcaaaag gaataatggc aggcttcgcc
     4261 cgcaaatcga aaatccttcc ccaccggtcc cctgccgccg ccttcccccg cgtccgccct
     4321 tttcttgaaa gcataagcga atcgggcgat aatcaacgcc gtctgaccat ccacttatcc
     4381 gaaacaccag caaggaaaat acaaaatgtc tcaactggca aacgcaatcc gcttcctctc
     4441 cgcagatgcc gttcaaaaag caaattccgg ccaccccggc gcgcctatgg gtatggcgga
     4501 aatggcggaa acattgtgga cgaaattcct caatcacaat cccgccaacc ccaaattcta
     4561 caaccgcgac cgcttcgtcc tctccaacgg ccacgcgtct atgctgttgt acagcctgct
     4621 gcacctgacc ggctacaatc tgagcattga agacttgaaa aacttccgcc aactgcacag
     4681 caaaaccccc ggccatcccg aatacggcta taccgacggc gtggaaacca cgaccggccc
     4741 gttggggcaa gggattgcca acgcggtggg catggcatta gccgaaaaaa tccttgccgc
     4801 cgaatttaat aaagatggtt tgaacatcgt cgatcattac acctacgtct tcatgggcga
     4861 cggctgtctg atggaaggcg tatcgcacga agcctgttcg ctcgccggca ctttaggctt
     4921 gggcaaactg attgttttgt atgacgataa caatatttcc attgatggta aagtggacgg
     4981 ctggtttacc gaaaacatcc cgcaacgctt tgaaagctac ggctggcacg tcgttcctaa
     5041 cgtaaacggt catgacaccg ccgccattca agccgccatc gaagccgcac gtgccgaaac
     5101 cggcaaaccg tccatcatct gctgcaaaac cttaatcggc aaaggcagtg ccaacaaaga
     5161 aggcagccac aaaacccacg gcgcaccttt gggcgcggac gaaatcgaag ccacgcgcaa
     5221 acatttgggc tggacttacc ccgcctttga aatcccgcaa gaaatttacg atgcgtggaa
     5281 tgccaaagaa caaggcgcga aactggaagc cgaatggaac gaactcttcg cgcaatatca
     5341 agccaaatat cctaccgaag ccgcagaatt cgtgcgccgt atggataaaa aactgccgga
     5401 aaactttgac gagtacgttc agacggcatt gaaagaagtg tgcgccaaag ccgaaaccat
     5461 cgccacccgc aaagccagcc aaaacagtat cgaaattctc gccaaagcac tgcccgaact
     5521 ggtaggcggt tctgccgacc tgaccccgtc caatctgacc gactggtcaa acagtgtctc
     5581 cgttacccgc gacaaaggcg gcaactacat ccactacggc gtgcgcgagt tcggcatggg
     5641 tgcgattatg aacggtttgg tattgcacgg cggcgtaaaa cccttcggcg cgactttcct
     5701 gatgttcagc gaatacgagc gcaatgccct gcgtatggct gcgttgatga aaatcaaccc
     5761 tgtatttgtg tttacccacg actccatcgg tttgggcgaa gacggcccga cccatcaacc
     5821 gattgagcaa accgccaccc tgcgcctgat tccgaatatg gacgtatggc ggccgtgcga
     5881 caccgccgaa tctctggtcg cttgggcaga agccatcaaa gccgccgatc atccgtcctg
     5941 cctgattttc agccgtcaaa acctgaaatt ccaagcgcgc aacgaacaac aactgaacga
     6001 tatcaaacgc ggcggctacg tcatcagcga agcccaaggc aacgcccaag ccgtcatcat
     6061 tgccaccggt tccgaagtcg agctggcttt ggaagcgcaa aaagtattgg cagaacaagg
     6121 catcgccgtg cgtgtcgttt ccatgccgtc caccaacgta ttcgaccgcc aagacgctgc
     6181 ctatcaaacc gccgtcctgc ccgaaggtct gccgcgcatc tccgtagaag ccggacacgc
     6241 cgacggctgg tacaaatacg tcggactgaa cggcgcagtc gtcggcatca accgcttcgg
     6301 cgaatccgcc cctgccgatt tactcttcaa agcattcggc tttaccgtag acaatgtggt
     6361 tgatacggtg aaatcagtgc tgtaaaccca cacctaaaca aatgccgtct gaacgctttt
     6421 caaacggcat ttttttgccc tcccgccttg atgcttcctc attccgccaa tctccattat
     6481 aatatttgcg aatcactctt attcacattt caaaaggaga aacgtatgaa cacccgcacc
     6541 gaacacgaca cgatgggcaa tgtcgaagtc ccgtccgaag cctattgggg cgcgcagacc
     6601 cagcgcagcc gcaacaattt caaaatcggc ggcgaaaccc tgccgcagcc gctgatttat
     6661 gctttggcgc tggtgaaaaa agccgctgcc gcgaccaatg tttccctcgg caggattaag
     6721 ccggaacagg cggatttgat tacgcaggcg gcggatgatg tgttgaacgg caggcttgac
     6781 ggacagtttc ctttagtggt ttggcagacc ggctccggca cgcagtccaa tatgaacatg
     6841 aacgaagtgc tggcgaaccg cgccaacgaa attgcaggta cgggtttggc ggcttatcag
     6901 cccgtccatc ccaacgacca tgtgaaccac gcgcaatcga ccaacgacgc attcccgacc
     6961 gctatccacg ttgccgccgc gattgaaatc aaccgccacc tcatccccgc cgtaaaagcc
     7021 ctgcgcgaca cgttggacaa aaaagcccaa gctttcgccc ctatcgtcaa aatcggccgc
     7081 acccacttgc aagacgcgac gccgctgact ttgggacagg aattttccgg ctacgtttcc
     7141 cagcttgatc acggtttagg ccgtctgaac gatgcgctta aagacttgta tgaacttgct
     7201 ttgggcggta cggcggtcgg cacgggtttg aacagccatc ccgaatacgc cgaaaaagcc
     7261 gccgccaaac tcgccgaact gtccggcttg ccgtttgtca gcgcgccgaa caaatttgaa
     7321 gccttaggcg gacgcgatgc cgccgttgcc gcttcgggcg cattgaaaac actggcggca
     7381 agcctgaaca aaatcgccaa cgacatccgc tggctggcaa gcggcccgcg ttgcggtttg
     7441 ggcgaaatca aaatccccga aaacgagccg ggttcgtcca tcatgccggg caaagtcaac
     7501 ccgacccaat gcgaagcaat gacgatggtg tgctgccaag tgttcggcaa cgacgttacc
     7561 atcggtatgg cgggcgcgtc gggcaatttc gagctgaacg tctatatgcc cgtcatcgcc
     7621 tacaacctct tgcaatccat ccgcctgttg ggcgacgcgt gcaacagctt caacgaacac
     7681 tgcgccgtcg gcattgaacc cgtaccggaa aaaatcgact atttcctgca ccattccctg
     7741 atgctcgtta ccgcgttaaa ccgcaaaatc ggttacgaaa acgccgccaa agtcgccaaa
     7801 accgcctaca aaaacaacaa atcgttgcgc gaaaccgccg ttgagttggg cttgctgacg
     7861 ggcgaagaat ttgacgaact ggtcgttcct gccgatatgg ttcatccgcg ctaatctttc
     7921 cctcaaataa aatgccgtct gaaacctcgt tcggacggca ttttccgttg cctgcgaact
     7981 agcggcgttt gaacagcctg tcccccaccg ccgccgtaac cgcacccccg accacgatca
     8041 gtgcgccaac ataacccaaa ccgttcatat ccggcgcggc aaaagtatca ggcatcacat
     8101 aatgcccgag caaagaaaat attacggtaa acacggggag caaggttgtt accgcgctga
     8161 ctttggaagc ctcccaatgt ttcaacgcct cgccgaacga gccgtaaccg attaacgtat
     8221 tcaagcagca atacgcaaaa caaacccacg ccaacgtacc gtccaaactt ccgatgtgtg
     8281 ccggttcggc aaacggcagg aacacggcgg cacttgccgc ataaatcaac agcagaatct
     8341 gttgcggccc gaattgcgcc gacagcagct tttgcgccac ggcataacac acccatgcca
     8401 tactgcctgc cgcacacagc aacacgccct tcgcatacgc gcccaaaccc gacaactcgc
     8461 cgaatttatc gttaaaaaac ataagcaaac cggcaagcag caaaaccaag ccgattttct
     8521 gagcggcagt catccggtct ttaaacacca acacaccgac aacaatcatc gtaaacggcg
     8581 aaatctgcca caaaacctgc gtcgtggtcg gcgaaatata atgcagccct tgggcaatca
     8641 gcacaaagtt tgccgaaatg cccgccacgc cgagcagcag cagcctgaat gagcaccaag
     8701 aaaaatcccg ccacttcggc agccgcccgc ccaatgccag caaaacaaac aataccgccg
     8761 ccgccacggt aaaacgcacc cacaccagcg tcggcgcatc gacaaacttc aatacctgcc
     8821 gcacggcaat cggcagcgtt ccccacgtca tcgccgccaa aagtgccaac gcgaagccta
     8881 ggagcggcct ttggttttcc atcctgattt tcctattttt aaacaaccgt attgccggac
     8941 gatgccggtt tgccgcatcg ggcaatgatg gttcaagcgt ttgacgtttg attccaaccc
     9001 tttgatttca aacaaaccgg ctgaagcccg actattgctt cgcgctattt ggaaacaccg
     9061 cctgaatttt aaaatgccgt ctgaaaacag cggggacgtg cggcaggcat cactgcctca
     9121 aaacgcccga acggcgcaat cgcaacgttc cgcccaacgc aaggggcggc aacaagccgg
     9181 ctcggatgca aaaaagagaa accctgcccc gtaaggttta aggtttctcc gtcctttatg
     9241 atttccctct gcgaggatgt ccggccgtaa aattcagaac gggatgtcgt cgtcaatatc
     9301 ctcgaccggg gcggcggcag gcacgggttg gcggcgcggc gcggctggtg cttcttgggg
     9361 atgggacggc gcgtcggagg cgggctgccg gctttgctgt gcggggcgtt ggtaagcctc
     9421 ctgactctga ccgtaacctt cctcgtaagg cgcaccgccg ctgttttcat tgcgcccgcc
     9481 caacattttc atttcgttgg cgacaatatc gtaagcggtg cgttcgatgc cgtctttgcc
     9541 ttggtatttg cggctttgga ttctgccttc cagataaacc agcccgcctt ttttgaggta
     9601 ttgcccggca atttccgcca gtttgcggta catcgtgatg ttgtgccact cagtacgctc
     9661 tacacgttgg ccgttgcggt cgttccaagt ttcgctggtg gcgacgctga aattacacac
     9721 cgcctcgccg ttgggcatat agcgcacttc gggatcgcgt ccgaggcggc cgataaggat
     9781 aactttgttc aatgacattt ttaaactcct gtaatgattt tttcagcggc agcctgatcg
     9841 aaacccttct gcaacacttt gagatagacg gtctgcccgt cgaaactgaa accgatgtct
     9901 tccacgcctt cgagttgcaa cagggcgcgt tgtaagccgt cctgattgac ctgccacacg
     9961 ccgccgacag ggtaactgag gtttttgacg ggcttgggcg caggcgataa aacggcaatc
    10021 accagccaca gcagcatcaa tatgctgcaa aaggcaaaca cgccggaaaa gccgtatttt
    10081 tgaaacagca aaccgcctgc cacgccgccg gcaaacagtc cgagcgactg catcgtgttg
    10141 tacacgccca tcgccgtacc cttcaggtcg gacggcgcga ttttggaaac catagacggc
    10201 aggctcgctt ccaacacatt aaaaccgata aagtaaacaa ccaaataagc ggtaatcaag
    10261 cctaccgagc gcataccgga cagcaaaccg agctgcgccg ccgcgatgca gacgatgccc
    10321 aaaacaaaaa cctgtttgag cttgttgcgc gtctctccga cgataatcag tggaaccatc
    10381 accaccaagc ccgtaatggt cgagggcaga tagactttcc aatgctgtat tttttccaaa
    10441 ccgagctggg tcatcgcgaa aggcagcgcg gtaaacaatg ccatttgcgc ggcgtgcagg
    10501 gcgaaaatgc cgaaatcgag cgtcagcagc ctacggtttt tcaaaacttc gcctatgcgc
    10561 gaaggctgcg cctgcgtatc ttcgtgcagc ttggaaacct ccgggtcggg agtcatccac
    10621 gccaccacgc cgatactggc aacggtcaaa ataccggtca gcagaaacaa gccgcgtacg
    10681 cccaccgcgt cggcaatcac aggggcaacg acgaggctga ccgaaaacgt cagaccgata
    10741 ctcaaaccga tcatcgccat cgcgcgggta cgtacgccgt cgcgcgtcaa atccgccagc
    10801 agcgcggtaa ccgccgcact gaccgctccc gcaccctgta tggcgcgtgc ggcgaccagc
    10861 atgggcagcg tatcggcggc ggcggcaagg aagctgcccg ctgcaaacac aatcagcccg
    10921 acataaatgg ttttcttgcg cccgaacttg tcggaagcga tgcccaaagg cagttgcagc
    10981 agagcctgtg tcagcccgta aatgcccatt gccagcccga ccagcgtttt gttgccttcc
    11041 gcgccgggca gcgaggcggc atacaccgcc aatacgggca gcacgaggaa catacccagc
    11101 atacgcagcg cgtacacgcc ggaaagcgtc gtactggcgc gccattcgtg cggaaacatt
    11161 tggatgcggt tatctcttgc catcatattt tttcagacgg catcaacagt tgcaatgccg
    11221 tctgaacttc cagtgaacag attttcggat tatacaggat tcgccgtatt tcggttgcgg
    11281 cgcgggttca aaatcaacgc cactgccagc ggttgcgcca cgcgcccaaa acggcgttcg
    11341 gatatttatt gctgcccaag ctgccgttaa agcgggcaag cgcgcggacg atgttgcctt
    11401 tttcaagatt ccggtaatgg cgcaggatgg tacagccgta acgcaggttg gtgcggatgt
    11461 cgaacaggtt gtgcgccggt ttgccgatgt agtttttcca aaacggcata acctgcatca
    11521 ggccgcgcgc gccgacaccg ctgattgcat actggcggaa cgcgctttcc acctcaatca
    11581 gccccaacac aatctgcgta tccaaaccgg cccggctgct ttcgtactgg atattgacca
    11641 gcagcctgcg ccgctcctcc tcctcgggga cgaaccttgc caaacgtgcc gacatggcag
    11701 acaaccaacg ttcgccctct ttcggattgt caaacaccag cctcggcgga ttgacgctgc
    11761 cgacagaact cctcatcacg gaagccacat cgtcggcaag cgtttcctca cgttgcgcgc
    11821 cggcgtgcgc cagaggactg agcaacaacg caccggcggc acacaacagg cggcggcgtt
    11881 gcagattaac gggtagggta tcggtcggtt ttttcatagg gaacgggggc gcgtccggac
    11941 gtttcagacg gcattaaata ttcaaacaga caatgattgc ttccaacgcg aaaaaccgcg
    12001 cacaaaatcc aagcgcggca tatcgccctg cccttttcgg gcaaaccttg attttaccgc
    12061 cctcaagaac gcttgtccaa acaggcacag gcaacaccac ccgggcattt tccgttttca
    12121 ccggttatcc gtcgtccgga ttatgcagca gcaccatcag cgcatcacgc ttttcgggcg
    12181 gcagcaggc
//
LOCUS       DAWEYF010000046        12148 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.046, whole genome shotgun sequence.
ACCESSION   DAWEYF010000046 DAWEYF010000000
VERSION     DAWEYF010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12148
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.046"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            141..1538
                     /gene="aspA"
                     /locus_tag="WGN93_000913"
     CDS             141..1538
                     /gene="aspA"
                     /locus_tag="WGN93_000913"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ0226836.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1610..2485)
                     /locus_tag="WGN93_000914"
     CDS             complement(1610..2485)
                     /locus_tag="WGN93_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ0226837.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWAEVKALFGI"
     gene            complement(2487..3209)
                     /locus_tag="WGN93_000915"
     CDS             complement(2487..3209)
                     /locus_tag="WGN93_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ0226838.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQQAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSRHAYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYLLGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNDGRAVAPEKWI"
     gene            complement(3232..3711)
                     /gene="ybaK"
                     /locus_tag="WGN93_000916"
     CDS             complement(3232..3711)
                     /gene="ybaK"
                     /locus_tag="WGN93_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ0226839.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFSRLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3786..4148
                     /locus_tag="WGN93_000917"
     CDS             3786..4148
                     /locus_tag="WGN93_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ0226840.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWCVEIKITAVKRDAATA"
     gene            4183..5046
                     /locus_tag="WGN93_000918"
     CDS             4183..5046
                     /locus_tag="WGN93_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ0226841.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPSLAFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAAEAGILLAADGEEAGIVLDSVKDSESFTALAVIKFSAAQKELTAPNGSIFKA
                     VHPFFKTENAE"
     gene            5144..6103
                     /gene="ttcA"
                     /locus_tag="WGN93_000919"
     CDS             5144..6103
                     /gene="ttcA"
                     /locus_tag="WGN93_000919"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ0226842.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6237..6791)
                     /locus_tag="WGN93_000920"
     CDS             complement(6237..6791)
                     /locus_tag="WGN93_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ0226843.1"
                     /translation="MKPKFKTVLTALFLAASLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTADPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATRGFYQNIPVQPVKIRRVVAE"
     gene            complement(6856..7782)
                     /locus_tag="WGN93_000921"
     CDS             complement(6856..7782)
                     /locus_tag="WGN93_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ0226844.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKTKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCPPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIQWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKFTDGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            complement(7770..8246)
                     /locus_tag="WGN93_000922"
     CDS             complement(7770..8246)
                     /locus_tag="WGN93_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ0226845.1"
                     /translation="MKTNFKQKIIDQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGAVAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECNDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            complement(8317..8772)
                     /locus_tag="WGN93_000923"
     CDS             complement(8317..8772)
                     /locus_tag="WGN93_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ0226846.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKICQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETYRLADAGCRALLEKISK"
     gene            complement(8897..10012)
                     /locus_tag="WGN93_000924"
     CDS             complement(8897..10012)
                     /locus_tag="WGN93_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ0226847.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     VCGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            complement(10126..11223)
                     /locus_tag="WGN93_000925"
     CDS             complement(10126..11223)
                     /locus_tag="WGN93_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ0226848.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            complement(11305..>12148)
                     /locus_tag="WGN93_000926"
     CDS             complement(11305..>12148)
                     /locus_tag="WGN93_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ0226849.1"
                     /translation="AFNDPIYVNGFIEWANRHRLAYIGDADLHASFVSWMAEHTRERI
                     LALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESVAVEVIESLNFRPARG
                     ETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTFDRMKINSQLLLQTIL
                     GRFSVSSDNAGKQFFEDHKTYVPARFTDYAAAFVEHGAEAFVRPANRYNESTPSFGYG
                     HLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEVYVEEILADLADRHFL
                     VSAD"
BASE COUNT         2951 a         3345 c         2973 g         2879 t
ORIGIN      
        1 cccgaaaaca acgtttcccg ttttcagacg gcatacgata tggacaattt catccggccg
       61 gtatagtgtt cgtcctgcgg cggcatcttt ccgatggcgc attttttcaa tattaattat
      121 ccgacttaca aaggtaaaac atgactgtcc gtatcgaaca cgatttattg ggcgaccgcg
      181 agattcccgc cgaagtgtat tggggcatcc acactctgcg cgccattgaa aactttaaaa
      241 tctccacaca aaaaatttcc gacgtgccgc agtttgtccg cagtatggtg atggtgaaaa
      301 aagcaaccgc gcaggcaaac ggcgaattgg gtgcagtaaa acccgaaatc gccgccgcca
      361 ttgaaaaggc ttgcgacgaa gttctgctga acaaccgctg cctcgaccaa ttcccctccg
      421 acgtgtatca gggcggtgcg ggaacttcgg ttaatatgaa caccaacgaa gtcatcgcca
      481 acctcgcatt ggaagccttg ggatacgaaa aaggccgcta cgacatcgtc aatccgatgg
      541 atcacgtcaa cgccagccaa tccaccaacg atgcctaccc taccggcttc cgccttgccg
      601 tgtattacag catcggcgaa ttgctcgaca aactgactgt cctgaaaaac gcctttgccg
      661 ccaaagccga agaatttaaa gacgttttga aaatgggccg cacccagctt caagatgccg
      721 tgccgatgac tgccggccaa gaattccaat ctttccaagt gttgttggaa gaagaaatcc
      781 tcaacctcga ccgcacccgc caactgctgt tggaagtcaa tttgggcgca acggcaatcg
      841 gcacgggcgt gaacacgccc aaaggctacg ccgaactggt ggtcaaaaaa ctctccgaag
      901 tcagcggctt gccttgcaaa ctgaccgaaa acctgattga ggcgacctcc gactgcggcg
      961 catatgtgat ggtacacggc gcattgaagc gcacggcggt caaactctcc aaaatctgca
     1021 acgacttgcg cctgctctct tccggcccgc gtgccggctt gaaagaaatc aacctgcccg
     1081 aattgcaggc cggttcttcc ataatgcccg ccaaagtcaa tcccgtgatt cccgaagtgg
     1141 tcaaccaagt ctgcttcaaa gtcatcggca acgacacgac gattaccttc gccgccgaag
     1201 ccgggcaact gcaattaaac gtgatggagc cggtcatcgc ccaatgtatg tttgaaacca
     1261 tttccctctt gggcaatgcc gcagtcaacc tgtccgacaa atgcgtcaaa ggcattacgg
     1321 tcaaccgcga aatctgcgaa cgttacgttt tcaactccat cggtttggtg acttatctga
     1381 atccgtatat cggacaccac aacggcgatt tggtcggcaa aatctgcgcc caaaccggca
     1441 aaggcgtgcg cgaggttgtc ttggaacgcg ggctgttgag cgaagaagaa ctcaaccgca
     1501 tcctctctcc cgagaacctg atgaaccccc atctgtaacg ttgcagacaa atgccgtctg
     1561 aagcagggat gctgcttcag acggcatttt gttatatcaa tcagccggat tatatgccga
     1621 acagtgcctt gacctccgcc caataaaaca ggcaggcgat ggaacacagt gccaacacga
     1681 ttcccgccgt attgattgtg ttgatttttt ccttaaaaaa cagtgcgccc gaaagcgtcc
     1741 ccaaaacaat cacgccgata ttcataccgg caaaaaccag cgtgggattg tccttcatca
     1801 tttggtgcgc ggtgatgtag gttacgatgt tcatgaagtt caaaccgccc aagagtatgc
     1861 cgccgaccac actctcaacg cgccatctga ccgatttggc aaacaggcag gcaaacatca
     1921 gcacacccgc cagcacaaat gcaaccagca ggttgcccgc aaatgccgtt ccgcttttgg
     1981 caagctgttt gaacaggata tcgataatgc cgtaacctgc ccacacgccc agcagcaatg
     2041 ccgcctgccg ccacgcgctt cctgattttt tgccaccgct gtgtttccaa agcaggcaga
     2101 acagtgcggc aaatgcgagg cacagcccga ttagtctgcc ttcgctgagt ttttcgccaa
     2161 acagcgtcaa ggcggcaaca atcggcaaaa acagcgacaa acgctgcgcc gcgtcggatt
     2221 tgacgatacc ggcggattct acggatttgc ccataatgac aaatacggac ggcagcagca
     2281 cgcctaatgc ggcaaacagc ggccacgtcg gcaaaaatgc gccgatattg ccgacatccg
     2341 gcttcaatac cagcaaagtc agtatgaccg cgaccacata attgacggcg accgcctgcg
     2401 cgatgtcgat ttttttcttc cttgccattt tcagcaaaat ggaaaccgac acgctgaaca
     2461 cgatgctgat taacaggtaa gccatactat atccatttct cgggtgcaac cgccctgccg
     2521 tcgttgaagc ggataaagcc ggcgatgatg cggtagaaat accagacgtt cgttgcaata
     2581 ataatcagca cgccgatacc caaaagggca gtcagcgcgc ccaaaagata aagccaaaat
     2641 gtgcgccaaa aggttttaat caggtattcg gtatgtgcgg catagacaat gctgtccaaa
     2701 ctgttccgtt tcatataggc gagaatcacg ccgactatgg gcatataggc gaaaatcacg
     2761 ccgactatgg gcatgaacag catgattgca cccaaaccga acaggatgta ggcggcgagg
     2821 acatagttgc gcccgcttcc gccgccggac ggttcgtaag catggcgcga acgtgaggcc
     2881 tgccgttcaa acgcctgtct gaacgcctgt tcgcggcgca tctgttcgcg gtaaaactgc
     2941 tccctgcgcg cctgttcgcg gcggaatgcc tcttcctgcc gcccgcgttc ctcatgccgt
     3001 ctgaaggacg cgtcgtattg catccgtttc gacaggtcgg aaagcgtatc gtaagcctgt
     3061 tggatttctt tgaacttttc ttccgcctgc ggattgcccg gattgcggtc gggatggtat
     3121 ttcatcgcca gcttgcggta ggcgcgtttg atttcgtccg ctcccgcctg cggcgacacg
     3181 cccaatacgg catacaaatc tttgtccata ttgttccttt atactttccc gtcaaaccgc
     3241 cgcctgtatt gttttcgggt tcaaaatatt taaatctccg ggacggatgc cgataatgaa
     3301 cccgcgtttt ccgccgttga tatagatggt ttccaaatcc atcaccgact gttcgacgta
     3361 aatatccaac tttgtccgga tgccgaacgg cgttgtgcct ccgaccagat agcccgtcca
     3421 cttgtttgcc tgtgcgggcg tagcgggttc gatgtgtttc gcacccaaat gccgagccag
     3481 attgcgcgtg gaaatctgtt tgtcgccgtg catcaagaca atcagcccct taccgttttc
     3541 atcttgcaaa acaatggttt taatgaccaa gtgttcgtct ttgccgaaca gtcgggaaaa
     3601 ctgcgccgtg ccgccgtgtt cctcataggc ataggtaaaa ggttcaaatt cgatgccgtt
     3661 ttcacgcaaa acgcgcacgg caggtgttat cggataagtg tgtttactca tttttcgtca
     3721 tgcaaaacat ggaaatcggc caagcgcaat gttaccatat atccccttta tcgaaggaaa
     3781 ccgatatgga tatccgatat ttcggcacaa cgccccgcta ttccgaagcc gtcggcgcaa
     3841 acggcttgat tttcctctcc ggcatggttc ccgaaaacgg tgaaacggct gccgaacaga
     3901 ctgccgacgt gcttgcccaa atcgaccgct ggctggcgga atgcggctcg gacaaagcgc
     3961 acgttttgga tgcggtcatc tatctgcgcg atatgggcga ctatgcggaa atgaacggcg
     4021 tgtgggacgc ttgggttgcc gccggcagaa cgcccgcccg cgcctgcgtg gaagctcggc
     4081 tcgcccgtcc ggagtggtgc gtcgaaatca aaataaccgc cgtgaagaga gacgcggcaa
     4141 ctgcataaac agatttcctt tatatttcag agtacgcaaa tgatgaaaac cttactgccc
     4201 tttttcggcg tggtgcgcgt cagcggcgaa gaccgccaaa ccttcctgca cggacagctt
     4261 tccaacgaca tcaaccacct tcagaccggg caggcgtgtt atgcgactta caacacgccc
     4321 aaaggccgcg tcatcgccaa tatgattgtc gtcaaccgag gcggcgattt gctgctgatt
     4381 atggcgcaag acctgcttga agcaacggtc aaacgtttgc ggatgtttgt gttacgcgcc
     4441 aaagccgttt ttgaaatcct tgaagattac gccgtcggcg cggaattaga agcatccgcc
     4501 gaaccgcttg ccgcgcaaga acccagcctc gcctttaccg ccgaatgcgg ttcagacggc
     4561 atctgttccg tcgtcctgcc acatcggggc attttgcaca tcgcccccaa aaacgccttg
     4621 ccgccttatg atgccgccgc cgaaaacgcg tggcggctgc acgaaatccg cagcggttac
     4681 ccgtggatat gcgcggctac caaagaaact gccgttgccc aaatgctcaa ccagcacatc
     4741 atcggcggcg tacacttcaa aaaaggctgc tatcccggtc aggaaatcat tgcccgtgcc
     4801 cagtatcgcg gtcaggtcaa acgcggcttg gcggtattgt cgggaaattc ggcagccgaa
     4861 gcaggcatcc tgctggcggc agacggcgaa gaggccggca tcgtgctcga cagcgttaaa
     4921 gattcggaaa gctttaccgc ccttgccgtg attaaattct ccgccgcaca aaaagaactg
     4981 accgccccaa acggcagtat cttcaaagcg gttcatccct tctttaaaac cgaaaatgca
     5041 gaataatccc tctaatgccg tctgaacctt tttcagacgg cattttaaaa ccgcccctgt
     5101 tttcagttac aatgccgcat ccccaatttt tcaaaccacc gccatgtcca aaaaaaccaa
     5161 acaagaactg gaaaacaaca aactcagcaa acgcctgcgc cacgccgtcg gcgacgcgat
     5221 taacgatttc aacatgatcg agccgggtga caaaatcatg gtctgcctct ccggcggcaa
     5281 agacagctac gccctgttag acatcctgcg ccggcttcaa gccagcgcgc cgattgattt
     5341 cgaactggtc gccgtcaatc tcgaccaaaa gcagccgggc ttccccgaag aagtattgcc
     5401 gacctatctc gaaagcatcg gcgttcccta caaaatcgtt gaagaagaca cctactccac
     5461 cgtcaaacgc gtattagacg aaggcaaaac gacttgttcg ctgtgcagcc gcctgcgccg
     5521 cggcatcctc taccgcactg caaaagaatt gggctgcacc aaaatcgcct tgggacacca
     5581 ccgcgacgac atcctcgcca ccttgttttt aaatatgttt tacggcggca aactcaaagc
     5641 catgccgccc aagctggtga gcgacaacgg cgaacacatc gtcatccgtc cgctggcgta
     5701 tgtaaaagaa aaagacttaa tcaaatacgc cgaattaaaa caattcccca tcatcccgtg
     5761 caacctctgc ggctcgcaac ccaacctgca acgccaagtc atcggcgata tgctgcgcga
     5821 ttgggacaaa cgcttccccg gccgcatcga atcgatgttc tccgccctgc aaaacgtcgt
     5881 cccttcccac cttgccgata ccgaactctt cgactttgtc ggattggaac gcggtcaaac
     5941 cctgaaacac ggcggcgatt tggcgtttga cagcgaaaaa atgcccgaac gtttttcaga
     6001 cggcagcgaa gaagacgaaa gcgaaatcaa aatcgagccg caaaaagccg aacgcaaagt
     6061 catcaacatt ctggcgaaca agccgaaaac ctgcggcgcg taaacctcca ccgtcaaaaa
     6121 tgccgtctga agcccgtttg gcgtttcaga cggcatttta aaatcccgaa gtagacactt
     6181 ttcaacccca aacgcctgct ttttccgttt cagctttctg aaggtttccc gttatattac
     6241 tcggcaacaa cgcggcgaat tttgacgggc tgtacgggta tgttttgata aaagccgcgc
     6301 gtggcggttt tgacgcgggc gattttggaa acggtgttca tgccgctttc gaccctgccg
     6361 aaaacggtat agccgtattg tccgtttttg tagttgagtg aatcattgtc ggccagattg
     6421 ataaagaatt ggctggtggc ggaatccgga tcggccgtcc gcgccatggc gatggtaccg
     6481 gcagtgtttt tcaagccgtt gccggattcg ttggcaacgg ccttatcggt tgccttttgt
     6541 accaagtctt cggtaaatcc gccgccctgg ataacgaaac cgtcgataac gcggtgaaaa
     6601 acggtgtcgt cgtaaaagcc ttttcgagca tagcgcacga aattagcaac ggttttgggg
     6661 gctttggact cgtccaaaac caaacggata ttgcccatgt cggtttccat caaaacatgg
     6721 gttgccgcca tagacggcag ggaagccgcc aaaaacagcg cggttaaaac ggttttgaat
     6781 ttgggtttca tcccgtcctc ctcagacctt cagacggcat tttcatttca tatgccgtct
     6841 gaaagcgcgt gaacactatt ccaatgcgtc tttaagtttt tgttcgatta aatccgcatc
     6901 aaacgatttg gcaatcaatt caaaacggga atcacgccgc caagacactt ggttggcgcc
     6961 ccattgcccg tccacccagt tgagccatac ccatgtaccg agcacttgga acacgccttt
     7021 ggcgcgaaca agaccgtctg tgaatttggg caagtcgttg aagaagttgg tcagcttttc
     7081 gccgtcgaaa tcccgtccgg cggggaatgt gaaaccttgc gactggaatc ccatggtgtt
     7141 gtccggcagg gctttgaggc ggtagcgtga tttttcgatg acgggaatat cgagccattg
     7201 gatgtcgagt tgtgcgtttt ggacttcgac cactttggct ttgggcggga acagttttgc
     7261 cgctttgtcg tgaaattcgg caagctgttc gggggggcat aaatcggttt tgctggcgac
     7321 caatacgtcg caaataccga tttggtcttt atataaggct tgttgcgcgt aatcgggatt
     7381 aatgaattgg cgcggatcga cgacggtaaa gactgcgccg atttccaaaa ggctgtccag
     7441 cggtttggtt ttcagttcat caataacact ggcggcgtgc gccagtccgc ttgcctcaat
     7501 catcaggcgg tcgggcttgg cgtcgcgcag cattttctgt acggttacgc ccatttgcgg
     7561 accggcggtg caacacaaac agccgccggc gatttctgcc acggggatgc cgttgtcgct
     7621 caataccgcg ccgtcaatgc cgatttcgcc gaactcgttg acgatgatga cccatttctc
     7681 gttcgggtct ttctgctcca tcaggctttt aagcgcggtg gttttgcctg ttcccagaaa
     7741 acctgaaatc aggtggactt tggttttttt catttctgac attttttaca gattccagtt
     7801 aaaacaacgt gttcttcttt cagcgcgaag ccgctttcgg caacgcctgc gcgcaatgcc
     7861 gcccactcgt ggctcagggt ttgctcgtcc gccgtgccgc attcggtgca gaccaaaata
     7921 aacgcgctgt ggtgcgcttc ggcttcttcg tggtcgtggc aatggtcgtt gcactcgtgc
     7981 tgcgcgtggc tgcacaaaat atagccgttg accgccgcca ctttgtgcaa aacgccctgc
     8041 tccgcccaaa aatcaagggc gcggtaggcg gtcggcggcg caaccgcgcc ctcgctttgc
     8101 tgctgcatct gcgacaagac gttgtaggct ttaatcacgc cgctttgctg caagacaata
     8161 tctaatacct gctcgcgcaa agcggttacc tgcaagcctt cgctgcgtgc ctgatcgatg
     8221 attttttgct tgaaatttgt tttcataaat tccctgttta tgccgtctga acgaccgata
     8281 cggcaggagg cggttttata tttgtattca attactttat ttggaaatct tttccaacaa
     8341 tgcccgacag cccgcatccg caagcctgta tgtttcttca aaatcgcccg tgtaccacgg
     8401 atcggggaca tggtcgtaac cgctttcggg tatcaggtcg gtcagcttga atattttttc
     8461 cggccgcctg ccgaaggttc tttccaattc ggacaaattc ttgccgtcca tcgcgatgat
     8521 gcagtcaaac gccgccgcat cgctttggca gattttgcgg ctggtaaagc ctgaagcatc
     8581 gataccgtgt tttttcaata tctttgccgt ctcgcggtgc atatcttcgc cgtcgtgcca
     8641 gcccgatgtc cccgcgctgt ccgcttcaag gggaatgccc gcttcggcgg cgcggcggcg
     8701 caaaatgtat tccgccatcg gcgaacggca gatgttgccg aggcagacaa aaaggatttt
     8761 cggttttttc atatcccctc cctgttccgg cgcgatgccg tctgaagcgg aaaccctttc
     8821 agacggcatc ggtcggttaa tcgtaaccgc ataaggcaga accagccaaa acatccatct
     8881 ggaagaaatg gtttggctaa atcttaggca tatttaataa gtgtccaata ttagaagccg
     8941 tatgctccaa atagagactg gcatttttca aactatcttc taaaggttca cttttctcca
     9001 aaatagaaaa ggcagcttgg atattttcaa atggcaggga aggcaaatct tcaacgagac
     9061 tgccacaaat agcgacaaca ggaactccga caggggttct ttttgctaca ccaataggcg
     9121 ctttccctgc taaactttga cgatctagtc ttccttcacc aatgataacc aagtcaacat
     9181 ctgacacttt cttatcaaag tcaatcaagt ccaggcaggt gtcaattcca gatacgatac
     9241 ttgcctgagc aaaggcgcac aaaccaccag cgatgcctcc accagctcct gctcctttaa
     9301 gttttaatgt tgcaggggag actttttcat aaaaatcttg tattgcctga tctacggcct
     9361 caaacatagt agaatccaac cctttttgct tgccaaacgt ataggtcgca ccttggtgtc
     9421 cacataaggg actcacaaca tctgctaaaa tacgaatgtg aacatcttca ggaatttcat
     9481 agcgattttc tgttgaaaca gaagctaggt ttagtaagga ttgaccgcaa acgggtaagg
     9541 tatttccatc ctcatcataa aattgataac ctaaaccagc agcaatccca atacctccat
     9601 cattactggc cgtaccgcca acgccaatat agatttcttt aatttcttga ctaatgaggt
     9661 ggcgaatcaa ttctccaata ccacgagttt ggatttgtaa tggatttcgt ttctctagcg
     9721 ggatttttcc aagaccaacc aaatcagcaa cttcgaatag ggctagttgt tctttttgaa
     9781 aatagcgcat gacttctttt tgtccaaaag gtcctgtcac ttgaagacat ttttcttcta
     9841 ggtcaagaga atgtcggata gcatctacag tgccttctcc cccatcaccg acaggacaga
     9901 ggagacattc cacatctgct atcgattgtt ggaagcctct ttttattgct tcagctacct
     9961 gttgagctgt caagctttcc ttaaacgaat ccggtgcaat tacaatcttc atatttataa
    10021 ttcatccttt cgtttcactc aaggcacaac acagaatgaa aaagtgttgt gctctttatt
    10081 ttgatttatt atataaatga gaaagcctat cactactaca aatcactatg cgctgaaaaa
    10141 cggattgtgc ccttcccgtt tcaatgcttc cgcatagctc gggatgcttt cctgttcgcc
    10201 caagggattg tgcaacaggt aaacgtgttc cacgcggcac tccgccatca ggtcgaggaa
    10261 attttgctgg atgacggcga tgttgtcggt aaaggaaagc tgccacgaaa acacctgcgg
    10321 cacgacttca aacgcgccgt cggtcgcatt aaacccgaat aaaacctgtc cgcccgcctt
    10381 tgccgcagcg accacgccga cgcgcggact ctgcatacgg acggcgcgta tcgcgtttgc
    10441 cgcaaacaca tccatcgcca tacgctggcg cgtgtggctg ccgtctgaaa gcgcgcgtac
    10501 cggagaatcc ggggaaagtg gattggcaaa cagcgtaaca ccttccgatg caagattttc
    10561 ctgccatacc tgcattaagg gcaggcctgc ctgaagaagg ttctgaccca atgccgtctg
    10621 aaccttgccg ctgccgaaac ccagcgcgta aacgacgtgg acggactgcc cttcgggcaa
    10681 cagcaaaggg cgcggggcga aacggcgtaa gtgttgcgcc gccgcttcgg tattttgttt
    10741 ggcacgccac cactcatccg gcgcgaccgc actcaaatcg gacgaatgca caagataagg
    10801 cagccattgt gtctcttgcg tcaacgcgcg caggtgcgga tagttttgca ggcaggcaaa
    10861 caatgcctcc gtcggcagct tcatctcgat tgcccgttct ttcttgcagc cggacaccag
    10921 cacgaccggc agggcgaacc actgcacttc gccttctttc tcgcaatcga gtaccgcgtt
    10981 cacactggaa agcagcgcgg cataagttcc ggcatcgggc gacatcgtca acgcgaggga
    11041 aaggttgata tagtggtttt gctcaagcat ccccctgatt tcggtttgaa gttggccgga
    11101 cgagagtttg cgcgaagcct gggaagaatt atgcgccaac tggtaggcat tgagcagcag
    11161 gtggttctta atcggatttt ggggatacgg gcgcgtatcg ggcaaggtaa atgtctggtt
    11221 catatgtgtc gtgtaccgct tttcgtagtg tgtgtttttc ctgtttgaaa atatatcgga
    11281 cggattgccg tcgggacttg cccgtcaatc cgccgaaacg agaaaatgcc tgtctgccaa
    11341 gtctgccaat atttcttcca catacacttc ggcaggcgga tggaatgtca aaccgtcggg
    11401 cgtggtgctg acgatgttca agttttcggc aaccgtttca atcaatgcct gtttgctcgt
    11461 cggccgcgac aattgccgca taatgtacaa atgcccatat ccgaatgagg gggtgctttc
    11521 gttgtaacgg ttggcaggcc ggacaaacgc ttccgcgccg tgttccacaa aggcggcggc
    11581 ataatctgta aaacgcgccg gcacataggt tttatggtct tcaaaaaatt gtttgcccgc
    11641 attgtctgat gaaacagaaa aacgcccgag aatggtttgc aataaaagct gggaattgat
    11701 tttcatacgg tcgaatgtca aaccgggaaa tcggcgggcg agattttccg caacatcttc
    11761 cgttttaaac ggctctccgg ttttcatcac atcgcgtatg cccgaaagca gggtatcgtt
    11821 ttcatcaaag ttgattgttt cccctcttgc cgggcggaaa ttcaaacttt ctatcacttc
    11881 gacggcaacc gactcgtcac gcctgacagt atccccgact tcctcacggc ataaaagcga
    11941 acggcggaat tggcggtcgg ataaaatatc gctgtaaaat tctttggcaa tataatcgcc
    12001 ccctgccaat gccagaatcc gctcccgcgt atgctccgcc atccaagaaa caaaagacgc
    12061 gtgcaaatcg gcatccccga tatacgccag ccggtggcgg tttgcccatt cgatgaagcc
    12121 gttgacgtaa atcgggtcgt taaacgcc
//
LOCUS       DAWEYF010000047        12125 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.047, whole genome shotgun sequence.
ACCESSION   DAWEYF010000047 DAWEYF010000000
VERSION     DAWEYF010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12125
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.047"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            16..287
                     /locus_tag="WGN93_000927"
                     /pseudo
     CDS             16..287
                     /locus_tag="WGN93_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            327..1361
                     /locus_tag="WGN93_000928"
     CDS             327..1361
                     /locus_tag="WGN93_000928"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ0226850.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            1567..2148
                     /locus_tag="WGN93_000929"
     CDS             1567..2148
                     /locus_tag="WGN93_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ0226851.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            2217..2399
                     /locus_tag="WGN93_000930"
     CDS             2217..2399
                     /locus_tag="WGN93_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ0226852.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            2396..3157
                     /gene="kdsB"
                     /locus_tag="WGN93_000931"
     CDS             2396..3157
                     /gene="kdsB"
                     /locus_tag="WGN93_000931"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ0226853.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            3180..3497
                     /locus_tag="WGN93_000932"
                     /pseudo
     CDS             3180..3497
                     /locus_tag="WGN93_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            3602..3799
                     /locus_tag="WGN93_000933"
     CDS             3602..3799
                     /locus_tag="WGN93_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226854.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDAAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            3956..4048
                     /locus_tag="WGN93_000934"
     tRNA            3956..4048
                     /locus_tag="WGN93_000934"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3990..3992,aa:Ser,seq:gct)
     gene            4351..5136
                     /locus_tag="WGN93_000935"
     CDS             4351..5136
                     /locus_tag="WGN93_000935"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ0226855.1"
                     /translation="MSRIRQAFAALNGEKALIPYITVGDPDIGATLAIMHSMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAKAGVDGMLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            5173..6045
                     /locus_tag="WGN93_000936"
     CDS             5173..6045
                     /locus_tag="WGN93_000936"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ0226856.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRREMKQRISG
                     LITLLCRQDKVSAA"
     gene            complement(6105..6716)
                     /locus_tag="WGN93_000937"
     CDS             complement(6105..6716)
                     /locus_tag="WGN93_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ0226857.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHDK"
     gene            6825..7049
                     /locus_tag="WGN93_000938"
     CDS             6825..7049
                     /locus_tag="WGN93_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ0226858.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            7050..7196
                     /locus_tag="WGN93_000939"
     CDS             7050..7196
                     /locus_tag="WGN93_000939"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226859.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            7412..8446
                     /gene="pyrC"
                     /locus_tag="WGN93_000940"
     CDS             7412..8446
                     /gene="pyrC"
                     /locus_tag="WGN93_000940"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ0226860.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAVLPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQDILFLVHGEVTDPEIDIFDREAAFIERVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(8813..9238)
                     /gene="nusB"
                     /locus_tag="WGN93_000941"
     CDS             complement(8813..9238)
                     /gene="nusB"
                     /locus_tag="WGN93_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ0226861.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAIPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(9316..9792)
                     /locus_tag="WGN93_000942"
     CDS             complement(9316..9792)
                     /locus_tag="WGN93_000942"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ0226862.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRILQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(9840..10163)
                     /locus_tag="WGN93_000943"
     CDS             complement(9840..10163)
                     /locus_tag="WGN93_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ0226863.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            10330..11049
                     /gene="rnc"
                     /locus_tag="WGN93_000944"
     CDS             10330..11049
                     /gene="rnc"
                     /locus_tag="WGN93_000944"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ0226864.1"
                     /translation="MKDDVLKQQAHAAIQKKLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            11096..12019
                     /gene="era"
                     /locus_tag="WGN93_000945"
     CDS             11096..12019
                     /gene="era"
                     /locus_tag="WGN93_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ0226865.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT         2793 a         2911 c         3544 g         2877 t
ORIGIN      
        1 gaaagatact ggaaaatgaa agagatgaaa cctgtccgtt atcatattgg cgatatgccc
       61 gagacttcaa aacaaaccgc ctcccgtcat gacgacaggg cagtgggtgt tgacgatgat
      121 tgttttcatg attcctttgg tcaatttttg tttgggtgtt cggcagaggc aacccgaacc
      181 gcgccaattt ctgtaaagcg cagttgctta tttacctgat tggttcgctt atcggtttgg
      241 tcttcgcgtt gtttataggt gggtctgtat cgggtacgca tgattaatgc cccgggctga
      301 ttttgcttcg aggatttgta tcgaatatgc cgaattgttt caaatttcat accgttatcg
      361 aacggcattg gcaaaaacct tatccggttt tgtcttttct gcttaagccg ctctccgggc
      421 tgtttgccaa aattgcggca aaacggcgga cggatttttt atcgggaaaa cggcaaagcg
      481 aaaagctgcc cgtgcctgtg gtcgtggtcg gcaatattca cgcgggtggg acggggaaaa
      541 cgccgattgt tgccgcgctg gtgtcgggtt tgcaggaaaa gggcgtcaag gtcggcatca
      601 tcagccgggg ctacgggcgc aagagcaagg cggttcatgt attgaatgct gagagccgag
      661 cggaagatgc gggcgatgag cctttgctgc tgttccgcaa aaccggtgcg ccgacggcgg
      721 tgggcagcag ccgtgcagag gcaggcaggg cgttgctggc ggcgcatccc gacatcggac
      781 tgattgtggc ggacgacggt ttgcagcatt acgccctgcg gcgagatgtg gaaatcgcgg
      841 tgtttccggc ggcggatacg gggcgcacgg atttggattt actgcccaac ggcagtttgc
      901 gcgaaccttt gttgcggctg gattcggtgg atgcggtcgt cgtcagcggc ggcaaggcgg
      961 atgcgctgtt taggccgtct gaaaatatgt ttcacagccg tatcgaagcg ggacggattt
     1021 accgtttgaa caatccgtcc gaaatactgg acacaggccg tctgaaaaat caaaccgtcg
     1081 tcgccgtggc aggtattgcc aagccggcgc gttttttcga ttcgttgcgg aatatgggca
     1141 ttaccgtgaa gcgaaccgtc gcgctgcccg accacgccga catttcggcg gcagatttgc
     1201 ccgatgcgga cgcggtcatt attacggaga aagatgcggt caaattttca gacggcattt
     1261 gcaccgataa tgtttgggtg ttgcccgttt gtgcgataat cgaacctgat ttggcggcgt
     1321 ttgtgttgga gcggttggaa gatgtaccga aggccgtctg aaagcacggt ttgggcggag
     1381 tgattacgga tttgaataag aacgcctcgc gccgtcattc ccgcgcaggc gggaatctaa
     1441 gtctcgaatt ttcaggaatg cctaggaggc ttcagaaatc ccaaatctcc ggatttccac
     1501 ttggacagga atgagaaaat cggtcgtatt ttttatctgc attaatcatt cgttaaagta
     1561 ttgaatatta aactgaaaac cttgttattg cccttcgcca cgctggcatt gtgcaccaac
     1621 gcttttgccg ccccgcccag cgacgcgtcg ttggcgcgtt ggctggatac gcagaatttt
     1681 gaccgggata tagaaaaaaa tatgattgag ggctttaatg ccggatttaa accgtatgcg
     1741 gacaaagccc ttgccgaaat gccggaagcg aaaaaagatc aggcggcaga agcctttaac
     1801 cgttatcgtg agaatgtttt gaaagatttg attacgcccg aagtgaaaca ggctgtccgt
     1861 aatactttat tgaagaatgc ccgtgagata tacacgcaag aagaaattga cggcatgatt
     1921 gccttttacg gttcgcctgt cggtcagtcc gtcgttgcca aaaatccgcg cttaatcaag
     1981 aaatcgatga gtgaaatagc agtatcttgg actgcattgt cagggaaaat cgcgcgacat
     2041 catctgcccg cgtttacgga agagttgcgg cgcatcatct gcggcggtaa aaatcccgat
     2101 gcgggctgta aacaagccgg acaggttggg aaaaggcatc agaaataaat gatagccgtc
     2161 tgaaatattg aagagggcat ccgattgatt gaaccatcaa acccgaaagc aaccctatgg
     2221 aaaaaaaatt cttagacatc ctcgtctgcc ccgttaccaa aggcaggctg gaatatcatc
     2281 aggacaaaca ggaattgtgg agccgtcagg cgaagcttgc ctatccgatt aaagacggca
     2341 ttccctatat gctggaaaac gaagcgcgtc cgttgggcga agaggaactc gaagcatgac
     2401 cgaattcgtc gtattgattc cggcgcggct ggattcgtcg cgcctgcccg gaaaagcctt
     2461 ggcggacatc cacggcaaac cgatggtcgt gcgcgttgcc gaacaggcgg caaaaagtaa
     2521 agctgtgcgc gtcgtcgttg ccaccgacca tcccgatatt cagacggcct gtcaggcgca
     2581 cggcgtcgaa gtcgtcatga cttcaaaccg gcacgaaagc ggcacgacgc gccttgccga
     2641 agcctctgcc gcgctgaagc tgccgccgca tctggtggtt gtcaacgtac agggcgacga
     2701 gccgctgatt gcacctgaac tcatcgaccg caccgccgaa gtactcgtcg aaaacaacgt
     2761 ccaaatggcg accgccgccc acgaattgca cgatttcgac gaattgatga atcccaatgc
     2821 cgtcaaagtt gtcctcgaca aaaaccgcaa cgccatctac ttcagccgcg ccccgattcc
     2881 ctatccgcgc gatgcgatgc gtgcaggaaa acgcgaaatg ccgtttgaaa ccgccgtcct
     2941 gcgccatatc ggcatctacg cctaccgcgt cggcttcctg caacgctaca ccgaaatgag
     3001 cgtttcgccg ctggaaacca ttgaatcgct ggagcaactg cgcgtcctgt ggcacggcta
     3061 cccgattgcc gtcgaaaccg ccaaagaagc tcctgccgcc ggcgtagata cgcaggagga
     3121 tttggacagg attcgcgctg tatttcagac tatataaaat agattcaaag ggaaaagata
     3181 tgcagcaaca tattgaaaaa tggcaacact tgagccggga agaacagaaa atccttgctg
     3241 aagtatgggg tctcgtgcaa aacgacgatc aggaggttca ctatgaaatg ctcaaattga
     3301 acgcacccga cgaagccagt ggcgaatttt ggttcagaat ggcagaaaca ctcagcaccc
     3361 tgccgcccaa ccgttccctc gaccttagaa tgaacggcgg caggctggcg accgccgtat
     3421 ccatcctttc cgtcatgatt gaagacaatc ccgacatacc gcagctttgg gcgcaaaaaa
     3481 ttaccgcgct caattatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgtc
     3541 gtactatctg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     3601 tttggcacac ggacacaaag cccgtgccga cggtttggca caacagcccg acaaagcggc
     3661 agaagccaac gaggaggaat acctgaccaa agccctgtcg caaaacctac tgtcaacatt
     3721 ggatgccgcg cttgcacgtt ttcctgaaga cgcgtggttt caggaaatca aacaggatgc
     3781 acaaaagcat tttgcttgag gatgtggcag tcaggaatat ttccattcag gaagaaaaga
     3841 agtgcctgat tgggtataat cagggtaaat cttattttat ttcaaaagat taatatttgc
     3901 tttctgtttt tccttgacgg tatcggaaaa gttgattata gttacagctt ccttaggagt
     3961 aatggctgag aggctgaagg cacttccctg ctaaggaagc atgtggggtc aacctgcatc
     4021 gagggttcga atccctctta ctccgccaag atgagaagac gctgtgtttt acagcgtctt
     4081 tttttacgcg ctttgttgcg gaagtgccga gggctgtctg ccgtgcgccg cctggatttg
     4141 caatgtgccc gcccgtgcaa aatccgattt gaccaacctg aagggcaggt ttcggaagag
     4201 cggggaattt tgataaacaa aaaactgcac ggcataatct ttcccggttt tcattttccg
     4261 tattcgccta tccgtaccgc aaatgctata ctgggaaaaa tttaccgatt gtgttttacg
     4321 gcatatttgc cgataggatg gaagagacaa atgagcagaa tccggcaggc ttttgccgct
     4381 ttaaacggtg aaaaggcatt gattccttat attacggttg gagacccgga tattggggcg
     4441 actttggcaa taatgcacag tatggttgca aacggtgcgg atattttaga gttgggcgtg
     4501 ccgttttccg atccgatggc ggacgggccg gtgattcagc gtgcggcgga gcgggcgttg
     4561 gcaaacggga tttcgctgcg cgatgtcttg gatgtcgtca gaaaattccg tgaaaccgac
     4621 acgcaaacgc cggttgtttt gatgggatat ttgaaccctg tacataagat gggttatcgg
     4681 gagtttgctc aggaagccgc aaaggcgggt gtggacggca tgttgacggt ggattcccct
     4741 gtcgaaacca tcgatccgct ctatcgcgag ctgaaggata acggggtcga ctgtattttc
     4801 ctgattgcgc cgacgacgac ggaagaccgt attaaaacca ttgccgagct ggcaggcgga
     4861 tttgtctatt atgtttcgct caagggcgta acgggcgcgg caagtttgga tacggatgag
     4921 gtttcgcgta aaatagagta tttgcatcag tatatcgata ttcccatcgg tgtcggtttc
     4981 ggcatcagca atgcggaaag cgcgcgcaaa atcggccggg ttgccgacgc ggtcattgtc
     5041 ggcagccgga ttgtgaaaga gattgaaaac aatgcgggca acgaggctgc ggccgtcggt
     5101 gctttggtca aagagttgaa ggatgccgtg cgctgattct gtcacgcatt ctaaatattt
     5161 taggagttgt ccatgagctg gttagataaa atcctgccac ccaaaatcaa aaaccgcagc
     5221 aaagacggtt cttccaatgt tcccgagggt ttgtggcaca aatgtccgtc ttgttcggca
     5281 accgtttatt cgaccgagtt gcagcagaac aatcaggttt gtccgaaatg caaccaccac
     5341 aatccgttgt cggcacgaca acgcctgaat ctgcttttgg atgaggatgg cagagaggag
     5401 gttgccggaa atgtcaaacc gacagatcct ttgaagttta aagacggcaa aaaatatccg
     5461 gatcgtttga gtgcggcacg caagctgacc ggggaagatg atgctttggt ggtaatgaaa
     5521 ggcaagatga acggtctgcc cgttgtggtt gctgcgtttg agttccgctt tatcggcggt
     5581 tcgatgggtt cggttgtggg cgaacgattc gtacaaggta tccgtcgggc ggttgccgac
     5641 aattgtccgt tcgtctgtgt ggcggcttcc ggcggtgcgc gtatgcagga gggtgtgaac
     5701 tcgttgatgc agatgacgaa aaccagtgcc gcgctgcatt tgctgacgga aaaacgcctg
     5761 ccgtttatat cggtattgac cgatccgact atgggcggcg tatccgccag cttcgcattt
     5821 ttgggcgatg tcgtgcttgc cgaacccaat gcattaatcg gctttgccgg tccgcgcgtg
     5881 attgagcaga cggtgcgcga aacgctgccg gaaggcttcc agcgtgccga gtttttgctg
     5941 gaaaaaggcg caatcgacca gattgtcgac cggcgcgaga tgaagcagag aatcagcggt
     6001 ttgattacgc tgttgtgccg tcaggacaaa gtttctgccg cctgatggct gatgaatcga
     6061 ataccgtctg aaaccgatgt ttcagacggt atttttgtgt ctggttattt gtcgtgcggc
     6121 ttcatcgacg gggcatagcg tccggcacgt tctttcaggc gttgtaccaa acctttcgtg
     6181 tcggcgggta caccgccctc gcagaatgcc tgatacagga cggtgcgcag tgcgtcgttg
     6241 cggcttaatg taccgcctat cggtttccat tcggcgtttc ggggctgtat ccagcggcgg
     6301 ttgaccgtgt cgccgtagcc gaacacttta taggaggaag gtttgccgtt gccgaacctg
     6361 atggagaagc gggcgcagaa tatgccttcg gcagtcaggt tgtcgtagcc tttgtcggag
     6421 cggatattga gaatgtagcg gatgctgccg tcgggcgcgg gcataatttg caggctgtcg
     6481 agcaggattt tcggctgttt gccgtaattt tcatccacat aaatgtcaaa ccagccgtcc
     6541 gagtgcgtat cgggcagcgg cggcagtttg gcggtatgtt ctttaaattc gcgggcggcg
     6601 gcttcttcgg gcgtttcgcg gtagcgggtg ttgatcggcg tgtctttttg gttgaagccg
     6661 gcagcaaggg acgtgccggc ggtgagtgcg agcagcagga gggcggtgcg gcgcataagt
     6721 ttctccaaat tgaaaacggc gttattttat gggttggcaa agggggctgc aagcaactgg
     6781 ggtataatct ccccccgatt cccatttttt aaacggtaca aacgatgaac agcgaaactt
     6841 tagacgtaac cggattgaaa tgtcccctgc cgattttgcg ggcgaaaaag gctttggcgc
     6901 aaatgcagca gggcgacgtg ttgaccgttc tggcaaccga cggcggcgca ccgggggatt
     6961 ttgaggcttt ttgccgccaa accggtcatg tgctgttgga tgcttccgaa caggacggcg
     7021 tgttcacgct ggtcgtcaag cacaaataaa tgccgtctga aatgcggatg tcccgcccga
     7081 cggcgttgtt tttgaatatc gtatgtgccg cgtgccgttt caaaaacaaa ccgtccggcg
     7141 tgcagtgtcg gcatttcggg cgtatcgccg ccgatttgtt ccggaatggc tgttaaccgc
     7201 cttgccgtcg gcaaagaagc aaaacccaag cacaatcaaa atctaaaggc tgtgtttgaa
     7261 gattccgttg atgcaaccca atcagtcgga caaaatgcct ttcatccaat ggaaccggtt
     7321 tccgaccgga cggaataacc ggctttcccc cggcaaacgg atggaatcga ccgggtattc
     7381 aaacgcagcc aaaacctaaa aaggaacaac catgcaaacc ctgaccatta tccgccccga
     7441 cgatatgcac ctgcacctgc gcgacggcga cgcgctcaaa gccgttgccc cttataccgc
     7501 ccgccaaatg gggcgcgccg tcattatgcc caacctcaaa ccgcccgtcg tcagtgtagc
     7561 cgacgcgctt gcctacaaag cgcgcattat ggcggtgttg cccgaaggca gcgcgtttga
     7621 gccgctgatg acgctttacc tgaccgacca agccacgccc gagctggtgc gcgaagccaa
     7681 agccgccggc atcgtcgcct tcaaactcta ccccgccggc gcgacgacca attccgattc
     7741 cggcgtaacc gacctattca agctcatccc cgtgttggaa gaaatggcaa aacaggacat
     7801 cctgttcctc gttcacggcg aagtaaccga ccccgaaatc gacattttcg accgcgaagc
     7861 cgcctttatc gagcgcgtga tgaaacccgt tttggcgcaa gtgccgaatc ttaaagtcgt
     7921 gtttgaacac attaccaccg ccgaagccgc ccgcctggtt ttggaagcag gcgacaacgt
     7981 tgccgcctct gtgaccccgc aacacctcct gctcaaccgc aacgacctct tggtcggcgg
     8041 cgtgcgcccc catcatttct gcctgcccgt cctcaagcgc gaaacccacc gtcaggcatt
     8101 ggttgccgcc gttaccggcg agaaggcgca caaattcttc ctcggcacag attccgcgcc
     8161 gcacgccaaa tccgctaaag aaaacgcctg cggttgcgcc ggtatgttca gcgcgatgac
     8221 cgccatcgag ctttacgccg aagtgtttga aaaagcaggc gcgttggaca aactcgaagc
     8281 ctttgcctcg aaaaacggcg caaggtttta cggcattccg gaaaacgccg gcacgatcac
     8341 cctcgtcaaa caaagccaaa ccgtccccgc aagtgttccc tacggcgacg gcgaacttgt
     8401 cccgatgcgc gcgggcggcg aaatcggctg gacggtacag tattgattga acggtcaagc
     8461 aaaatgccgt ctgaaaggtt tttcagacgg catttgtgtt gttgactgat tgatacgtca
     8521 acggcgtttg agtttgttac gtttcggtta tttccgataa attcccacaa ttttcaaatt
     8581 tcgccattcc cacgaaggca ggaatccgga aattcgatgc gaccagagtt tatcaaaaac
     8641 ggcagcaact caaaaaaccg gattcccgcc tgcgcgggaa tgacgagatt gaagtttcag
     8701 aatttatttg aaatacccaa aattcaaaaa accaaattcc cacatgcgtg ggaatgacga
     8761 aacaaagaaa gcagaaataa ggacatagaa ctttctttaa atttgtgatg catcaacggc
     8821 gtttgggctc gtcggggcgg atttgggcag cgagtttgtc gaggatgccg ttgacgaatt
     8881 tgtgcccgtc cgtaccgccg aaggttttgg taacttcgat ggcttcgttg ataatgacgg
     8941 ggtagggcgt ttcgggtatg gcggacagct cgtggcaggc ggtcagcagg acggcgcgtt
     9001 cgatggggtt gaggtctttt tcgtccctgt cgagcagcgg gcggatttgc cggatgtatt
     9061 ctgccgcatt ggtttgcgtg ccgaagaaaa gtttgttgaa caattcttcg tctgccttgg
     9121 caaagtcgga catttcgcgg atgtttttag caatctcggg tgctgcggtg cggttgataa
     9181 gggattggta aacggcttgt acggcaagct cgcgggaacg gcggcgggct gttttcatga
     9241 tttttccttg aaacggttgg gcggcacggt atgccgtctg aaacggaaag ggcgtattgg
     9301 tgtacgccct gtttgttatt cttcgtcttc aaactgttct tcgagcagca ggttgacgag
     9361 gttggcgcat tctacggcga ctttggcggc atccgaggct ttttcttcaa tccgttcgat
     9421 tgcctgcgcg tcgttttcgg tggttaagac ggcattggca atcgggatgt tgtagtcgag
     9481 tgcgacgcgg ctaacccctg ctccggattc gttggaaacc agctcgaaat ggtaggtttc
     9541 accacggatg acgacaccga tggcaatcag tgcgtcaaat ttttcggaag aggcaagatt
     9601 catcagcgcg atggggattt caagcgcgcc gggtacggtg gcgacggtaa tgttttcgtc
     9661 tgccacgccc aattcttgga ggatgcggca gcagactttg agcatttcgc tgccgatttc
     9721 gttggtgaag cgtgcctgta cgatgccgat gcggaggtgt ttgccgtcga ggttgggggc
     9781 gatggtgttc attgggtgtc ctttggtatt cggaggtttc ggaatgccgt ctgaaggttt
     9841 cagtcttgcg gctgccagtc ggcgacggtt tggaatgtgc cgtcttcggc aagctcccat
     9901 gcgctgcctt cgggttggga aagcagtgcg gcggtttcag ggttggtttt ggcgatgtcg
     9961 gcgaggctga cgatgctgaa gttgtccgga tcgtcggtgt attcgtcggt ctcgtcgccg
    10021 ctgaagaaac gccagccgct gtcgttttca aaaacggggg cttcgcggta gaggaagccg
    10081 acgggccggt tttgtttggc gacggtgttg gtggcgatac agcggtcgag tgccgaggaa
    10141 agtgcttgtg caaatgcgtt cattacggga atacgttggg ggaaaactta cggattttac
    10201 cacgattcgt gcgttgtcgg cagacggcgg cggtttggtg gtacaatgtg cgccgtttgc
    10261 agccttaagg tgtttctgta tttttggagt atggaaacgc attcgggctg ttttttgcgg
    10321 aagacggtaa tgaaagacga tgttttgaaa cagcaggcac acgcggcgat acagaagaaa
    10381 ctgggctacg cgttccgcga tatttcgctt ttgcggcagg ctttgacgca caggagccat
    10441 catgcgaagc acaacgagcg gtttgagttt gtcggcgatt cgattttgaa ttatacggtg
    10501 gcgcggatgc tgtttgacgc gtttccgaag ttgaccgagg gcgagttgtc gcggttgcgg
    10561 gcaagtctgg tcaatgaggg cgtgctggcg gaaatggcgg cggaaatgaa tgtcggcgac
    10621 ggtctgtact tgggggcggg cgagttgaag agcggcggct tcagacggcc ttcgatactg
    10681 gcggacgcga tggaggcgat gtttgcggcg gtcagcttcg atgccgattt caacacggcg
    10741 gaaaaggtgg tgcgccattt gtttgccgac cgcgtccggt gtgccgattt ccaaaatcag
    10801 gcaaaagacg gcaaaactgc tttgcaggag gcgttgcagg cacgccgctt tgctttgccg
    10861 aaataccgta tcgaagagca aatcggccat gccaacgaca gtatgtttgt ggtttcctgc
    10921 gatttgggcg aactgggttt cgtgtgccgt gccaaaggga cgagccgcaa ggcggcggaa
    10981 caggaggcgg cgaaagaggc tttgaaatgg ctggaagaga agctgccgct gaagaagaaa
    11041 aagaaatgag gcggcgcgtg aatatgccgt ctgaaatgtg gatatgaaag cgaatatgga
    11101 tattgaaacc ttccttgcag gggaacgcgc cgccggcgga taccgttgcg gcttcgtggc
    11161 gattgtcggt cgtccgaacg tgggcaaatc aacgctgatg aaccatctca tcggtcagaa
    11221 aatcagcatc accagcaaaa aggcgcagac gacgcgcaac cgcgtaacgg ggatttatac
    11281 cgacgatacc gcgcagttcg tgtttgtcga tacgcccggc tttcaaaccg accaccgcaa
    11341 cgcgctcaac gacaggctga atcaaaacgt taccgaggcg cttggcggcg tggatgtggt
    11401 ggttttcgtc gtggaagcga tgcgctttac cgatgccgac cgtgtcgtgt tgaaacaact
    11461 gcccaagcac acgccggtca ttttagtggt caacaaaatc gacaaggaca aggcgaaaga
    11521 ccgttacgcg ctggaggcgt ttgttgccca agtgcgcgcc gaatttgaat ttgcggcggc
    11581 ggaggcggtc agtgcgaaac acggattgcg gattgccaac ctgttggagc tgctcaagcc
    11641 gtatctgccc gaaagcgtgc cgatgtatcc cgaagatatg gttacggaca aatcggcgcg
    11701 ttttttagcg atggaaatcg tgcgtgaaaa attgttccgc tatttgggcg aggaattgcc
    11761 ttatgcgatg aacgtcgaag tggagcagtt tgaagaggaa gacggtttga accgcatcta
    11821 tatcgccgtt ttggtcgata aggaaagcca aaaggcgatt ttaatcggca aaggcgggga
    11881 gcgtttgaag aaaatttcca ccgaagcgcg gttggatatg gaaaaactgt ttgataccaa
    11941 agtatttttg aaggtctggg tcaaagtcaa atccggttgg gcggacgaca tccgcttcct
    12001 gcgcgagctg ggtttgtagt ttttcttgct gaactttacg caaatgccgt ccgaacaggt
    12061 ttcagacggc attttgtttc aatcgggaat atctttgtta aaaacgggtt gatattatct
    12121 gtgca
//
LOCUS       DAWEYF010000048        12077 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.048, whole genome shotgun sequence.
ACCESSION   DAWEYF010000048 DAWEYF010000000
VERSION     DAWEYF010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12077
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.048"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(53..2353)
                     /gene="recQ"
                     /locus_tag="WGN93_000946"
     CDS             complement(53..2353)
                     /gene="recQ"
                     /locus_tag="WGN93_000946"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ0226866.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMCEGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSGTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDNAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLEAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEASEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGSEQTDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QNLNGLHDIYGLGEAKIDRFGHGILKVCQNAADFSHDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKRKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLTVLGQNAV"
     gene            complement(2418..3200)
                     /gene="trpC"
                     /locus_tag="WGN93_000947"
     CDS             complement(2418..3200)
                     /gene="trpC"
                     /locus_tag="WGN93_000947"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ0226867.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVPLEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEREQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRTRGVHTFLIGETFMRADDIEAEVGKLF"
     gene            complement(3251..4207)
                     /locus_tag="WGN93_000948"
     CDS             complement(3251..4207)
                     /locus_tag="WGN93_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ0226868.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPTYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGGSGSHYAVELMLAVRDRGWNGVVVHFRSCGGVA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQASA
                     AISAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRRTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHAGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            complement(4340..5878)
                     /gene="murJ"
                     /locus_tag="WGN93_000949"
     CDS             complement(4340..5878)
                     /gene="murJ"
                     /locus_tag="WGN93_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ0226869.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQVSLVINTIFASYLQSGSVSWMYYADRMMELPS
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFFLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLYAAQIWLPFDWAHAGGMQKAARLFILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            5936..6043
                     /locus_tag="WGN93_000950"
                     /pseudo
     CDS             5936..6043
                     /locus_tag="WGN93_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            6337..7035
                     /locus_tag="WGN93_000951"
     CDS             6337..7035
                     /locus_tag="WGN93_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ0226870.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(7092..8096)
                     /locus_tag="WGN93_000952"
     CDS             complement(7092..8096)
                     /locus_tag="WGN93_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ0226871.1"
                     /translation="MQRQTELKNWLQTIYPERDFDLSFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            8166..10574
                     /locus_tag="WGN93_000953"
     CDS             8166..10574
                     /locus_tag="WGN93_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ0226872.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEHGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPIFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPSVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            10679..11695
                     /locus_tag="WGN93_000954"
     CDS             10679..11695
                     /locus_tag="WGN93_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ0226873.1"
                     /translation="MKIKALMIAAALLAAADVHAAPQKAKTASAKVAKVAKVAKVAAT
                     AQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSR
                     QVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDFADNIIAEKV
                     RQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAE
                     STIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ
                     VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAY
                     VDIR"
BASE COUNT         2800 a         3465 c         3384 g         2428 t
ORIGIN      
        1 aaacaggaat ttttaaatag aggcaatgcc gtctgaaact tggtaacggg cttcagacgg
       61 cattttgtcc caacaccgtc aacaccgccg caccgtaacg tgcggctttt tcttcgccta
      121 cgccatatac ggcggcaagc tccgccaaac cttccggctg tttggcggca atggcgcgca
      181 gggcggcttt gctgagaatg cggtagggtt cggactgttc gtgttttgcc gtttcgccgc
      241 accattggat cagggcgcgc atcaggcggc gtttgcgttt ggcggcttca tcgatgccgt
      301 ctgaaaacgg acggcagacg gcgaggatgt cccgtccgta tttggcggcg cgtacgctgc
      361 ccaagccgtg tacgccttcg aggtcggttt cggtttcagg cgtggcggca agcatatcgg
      421 caaggctttc gtcggagagg acggcatgca gggcgcagtt ttccgccctt gcctgttcat
      481 accgccaggc ttcgagtttt tgacgcagtt gctgttcgcg ttcggtttgc ggacggatga
      541 cggcatcgtg gctaaagtcg gcagcgtttt ggcagacttt gagtatgccg tgtccgaaac
      601 ggtcgatttt ggcttcgccc aagccgtaga tgtcgtgcag cccgttgagg ttttgcggca
      661 ttttttcgac aaggtcgcgc agggttttgt cgccgaaaat catataggcg gggatgcctt
      721 cggcttctgc ctgtttcata cgccaaacgc gcaatgcctg ccacaggcgt tcttcgcgtt
      781 cggtacgcag ccagttgtct ttgagggtgc gggcggcggg cttgtcgcgc ttgagcggac
      841 gcagcatcac ttcggtttcg cctttgagga cttttttggc ggcttcggtc agttgcaatg
      901 cctgatatcg ggtaatgttg acggtgagat agccgaggct gatgcactgg cggatgacgc
      961 tgcgccattc cttgtcggtc tgttcgctgc cgatgccgaa ggtagacagt tgttcgtgcc
     1021 ggttgccgcg tatccaatca tcgcttttac cacgcaaaag gttggtgatg taaccggcgg
     1081 caaaacgttg tccggcgcgg tacacgcagc tgagtaattt ttgtaccaac accgtgccgt
     1141 caaaccgcac aggcggatgc aggcagttgt cgcaatggcc gcagggttcg gatgcttcgc
     1201 cgaaatgttt gagcagcagt acgcggcggc aggcggcggt ttcgcagacg gaaagcatgg
     1261 catcgagttt ttgcatttcg atttgctttt gcacctcgtc gctgttgccc tcggcaatcc
     1321 gttcgcgcag caacacccaa tcgttcaaac cgtaacacag ccaactcacg gctggcagcc
     1381 cgtcccggcc ggcgcgcccc gattcctgat agaaatgttc gacactttgg ggcatatcga
     1441 gatgggcgac aaagcgcacg tcgggtttgt ctatgcccat gccgaacgcc acggtcgcca
     1501 ccacgataat attgtcttca tgcgtaaagc ggcgttggtt ttcctcgcgc acgtccatgc
     1561 tcaaaccggc atgatacgga atcgcctcca agccattttc acacaaaaac tgcgccacat
     1621 cctcgacttt tttgcggctt aggcaataca caatgccgct ttgcccatgc atctgcttgc
     1681 ggatgaaatc cagcaattgt tttttaccat tatttttttc gataacctga taataaatat
     1741 tcgggcggtc aaagctggaa ataaattcgg gcgcattgtc caagtgcaga taatgcttga
     1801 tgtcggcgcg cgtggcggca tcggcggtag cggtcagggc gatgcgcggg acgttcggat
     1861 agcgttcggc aagcatgccg agctgttggt attcggggcg gaaatcgtgt ccccattggc
     1921 tgacgcagtg cgcctcgtca atggcgaaca ggctgacggt ttgttggtcg agaaaacgca
     1981 aaaagcggtc ggtaactagg cgttccggtg cgacataaag cagtttcaga cgaccttggg
     2041 caagcttgtc ggcaatctcg cgcgccccat ctgccgatgt gccgctgttg actgccgccg
     2101 cttcgatgcc ggcggcgtgc aggtttgcca cttggtcgtt catcaacgca atcagcggcg
     2161 atacgacaac cgccacgcct tcgcacatca gcgcgggaat ctggtaacac aaagacttgc
     2221 cgccgcccgt cggcatcagc accgtcaaac tcccgccgcc tgccaaagta ttgatgacag
     2281 cctcctgcct gccgcgaaat tcgggataac caaatacttc gtgcagaatc tgtttggcgg
     2341 tcggtcggtg catgatggtt ccgtgctcgg taagggtgtt ggtcggttgg cggcaatatg
     2401 ccgtctgaaa tcgggattta gaagagtttg cccacttctg cttcaatatc gtcggcacgc
     2461 atgaacgttt cgccgatcag gaaggtgtgc acaccgcgcg tccgcataaa ttccacatcc
     2521 gccttacctg taatgccgct ttcggtaacg acggttttgc cttccagcgc gggcagcagc
     2581 gacagggttt ggtcgaggga gacttcaaaa gtcctcaggt tgcggttgtt tacaccccac
     2641 aacggcgtgg tcaggttgcg gcatttttcc aattcgcttt catcgtgcag ctcgagcagg
     2701 acggtcatgc ccaattcgtg cgccaccgct tcaaagcgtt ccaattgttc ccgttccagt
     2761 gcggcggcaa tcagcaggac ggcatccgcc ccccaggcgc gcgcctgata aacctgatat
     2821 tcgtcgatga tgaagtcttt gcgcagcacg ggcagcgata cggcttcgcg cgcctgtttg
     2881 aggtattcgg gcgaaccttg gaaatagggt tcgtcggtca gtacggacaa acacgccgcc
     2941 ccggcgtttt cataggcgcg ggcaatctcg gcaggtcgga agtccggacg gatcaggcct
     3001 ttgctcgggc ttgccttttt gatttcggca atgacggcgg gcaggtttag gcggtgtttg
     3061 ccgcgtatcg aatcgatgaa gctgcggacg ggcgcggctt ctgcggcaag tgcgcggatg
     3121 tgttcgaggg gaacggcggc tttttgggcg gcaacttcct gtgccttggc ggtaaggatt
     3181 ttattgagga tgtcggtcat attgtgttcc gtattcgtcc ggggaaaggg ggaatattag
     3241 catcaaaccg ttaacgcctg tttgtgcgga agctgtcgaa ataggacagg acggtctgcg
     3301 gcagccattg caggtgcagc ctgccgccgg tgctgccgac aaagccggcg tgtccgccgt
     3361 gtgccggctg gaacagggta acggcttcgg acacttcgtc cggtgtcggc agcgcttcgg
     3421 gcggcaggaa ggggtcgttg gcggcattga gcaggagcag cggtttggca acgtgtttga
     3481 gcagcggttt gcaggaagtt cggcggtagt agtcgtgccg gtcggcaaag ccgtgcagcg
     3541 gtgcggtgaa gcggtcgtca aactcgccca gtgttttgca ccctgcggca aatgccgtct
     3601 gaaaaccgtg gagcgaccgt gctttgggta tcagggtgcg gaggaagtag cgcgtgtaga
     3661 gcagccgtgt gatgccgctg tcgaagcggc tgcctgccgc ctctgcatcg acgggggcgg
     3721 agatggcggc cgaggcttgc ggcagcgcgt tttcgccctg ttcgcccaaa tattttgcca
     3781 gcgcgttgcc gcccagcgat acgccgacgg cgtatatttc acggtaacgc gcggcgagcg
     3841 tgtccaaagt aaaggcgatt tcggcggtat cgcccaagtg gtagaacact ggggcggtgt
     3901 tcgctacgcc gccgcagctg cggaaatgga cgactacgcc gttccaaccc cgatcgcgta
     3961 ccgcaagcat cagttcaacc gcgtaatggc tgccactgcc gccctccaac ccgtgaaaca
     4021 gcacgaccag cggcgcatcg ggcgaaatgc cgtctgaaaa gtcgtaggcg actttggttt
     4081 tacccgtgct gtcgggaagc agctcgcggc ggtatgtggg tgcggggcgt tgcaggaatt
     4141 tggcggcaat cgtgtcggca ttgccgttgc ggaggaaaaa gggcgtgtcc ggcggtgtta
     4201 aaatcataag gtatcggttt tcttgttttc agacggcatt gatgatgcgg cagcccgtcc
     4261 ggctggtgcg gacgcggggg atgcgcgccc gaatataggc gcggaaaaag cgttttccga
     4321 aaaaggatat cggcatcggt cagctttcca cccgtttgaa atggcgcgga cggaagccca
     4381 aagccgccag agatgcgaaa tacagtccgc cgccgacggc aatcaggatg aagagccggg
     4441 cggccttttg cattccaccg gcgtgtgccc agtcgaacgg cagccagatt tgggcggcat
     4501 acaggccgcc tcccatcacg gcgagcgaga gcagcatttt tgctaagaac gctgcccaac
     4561 ccttgccagg ttggtaaata ccgtgtctgc gtaacaggaa gaacaacaat ccggcattga
     4621 tgcacgcgcc cagaccgatg gcaagcgaaa gtccgacgtg tttcagtggg ccgataaagg
     4681 caaggttcat caactgcgtg cagatgagcg tgaagatggc gattttgacg ggcgttttga
     4741 tgttttgccg cgcatagaag ccgggtgcca acactttaat cataatcaaa ccgattaagc
     4801 cgaaagaata ggcaatcagc gcgtgctgcg tcatctgcgc gtcaaacagc gtaaattcgc
     4861 ggtacataaa cagtgtcgcc accagcggga acgacaacac cgccagtccg accgccgccg
     4921 gcagcgtcag cagcatacac aggcgcaaac cccagtcgag cagggcggaa aactgttccg
     4981 tatcttggtt tgccgagtgt ttggacaaag tcggcagcaa aatcgtaccg agtgccgccc
     5041 ccagcacgcc gctgggcagc tccatcatgc ggtcggcgta atacatccat gaaacgctgc
     5101 ccgattgcag ataagacgcg aaaatcgtgt tgatcaccaa agaaacctgc gccacgctca
     5161 cgcccaaaat cgcaggcgcc atctgtttca tcacgcggtt gaccgccgca tctttgaaat
     5221 tcagtttggg caatttcaaa aaacccagtt tcgccaacca agggagctga aagccgagct
     5281 gcaaaatacc gccgacaaaa accgcccaag ccagcgcggt aacgggagga tcgaaatacg
     5341 gcacgaaaaa cagcgcgaat acgataaacg acacgttcag gaacgtgggc gtaaacgccg
     5401 gaatgctgaa tttatgatag gaattgagta ccgagccgac aaaagaggaa agtgaaatca
     5461 ataagatata ggggaacgta atccgcagca aatcgatgga gagctgaaat ttgtcggcat
     5521 ctttggcaaa accgggtgcg gaaacataaa tcacccaagg cgcggcaagt atgcccagcg
     5581 cggtaacgat gaccagcaca aacgacagca tccccgccac atggcggata aaagcctccg
     5641 tcgcctcttt agaacgcgtt tccttatatt ccgccaaaat cggcacaaac gcttgggcaa
     5701 acgccccctc cgcaaacacg cggcgaagca ggttgggcag tttgaacgcg acaaaaaacg
     5761 catccgtcgc catgcccgcg ccgaatgcgc gcgcaatgac cgtatcgcgc acaaatccca
     5821 aaacgcgcga caccatcgtc aggctgccga cttttgccaa agctcccagc atattcatcg
     5881 tatttccttt tcggttgaaa ccccgccctt tagggcggca ggatcagact ttgatagtgg
     5941 attaaattta aatcaggaca aggcgacgaa gccacagaca gtacaaatag tacggcaagg
     6001 cgaggcaacg ctgtactggt ttaaatttaa tccactatat ttgaaagggg tgtaaccctt
     6061 ccgaaccagg gcaacgcata gggcggtgct ttatgtgccg tcctgtgcgt tggaacatca
     6121 ttagttcccc aacagccgta tccgtctggg gcgacggcgc gtattgtacg acagaaaccg
     6181 cttcagacgg catcgggttt gatgccgtcc gaagcggttt ccccaaacga aaacgtcctt
     6241 ttccggcggc aaactgtatc aacacgcgga aatgcaataa aatagccgga ttccgattga
     6301 tttccaacat ctgtttccaa catcacggag agccgtatga aatccagaca cctcgccctc
     6361 ggcgttgccg ccctgttcgc ccttgccgcg tgcgacagca aagtccaaac cagcgtcccc
     6421 gccgacagcg cgcctgccgc ttcggcagcc gccgccccgg cagggctggt cgaagggcaa
     6481 aactataccg tccttgccaa cccgattccc caacagcagg caggcaaagt cgaagtcctt
     6541 gagtttttcg gctatttttg tccgcactgc gcccacctcg aacctgtttt aagcaaacac
     6601 gccaagtctt ttaaagacga tatgtacctg cgtaccgaac acgtcgtctg gcagaaagaa
     6661 atgctgacgc tggcacgcct cgccgccgcc gtcgatatgg ctgccgccga cagcaaagat
     6721 gtggcgaaca gccatatttt cgatgcgatg gtcaaccaaa aaatcaagct gcaaaatccg
     6781 gaagtcctca aaaaatggct gggcgaacaa accgcctttg acggcaaaaa agtccttgcc
     6841 gcctacgagt cccccgaaag ccaggcgcgc gccgacaaaa tgcaggagct gaccgaaacc
     6901 ttccaaatcg acggtacgcc cacggttatc gtcggcggta aatataaagt tgaatttgcc
     6961 gactgggagt ccggtatgaa caccatcgac cttttggcgg acaaagtacg cgaagaacaa
     7021 aaagccgcgc agtaagcccg tttgaaaaat gccgtctgaa acttggtttt cagacggcat
     7081 tttgattggg tttaaaacgt aaagcccgtt tccagttctt catcgccgac cagttcgacc
     7141 aagagcgcgt agagcggggc gagttcggca taacggcgcg atacgcggcg cagatagttt
     7201 aagaaacgcg ggatttcggg acggtatttg tctttgccgt cacggtagta caggcgtgcg
     7261 aagatgcctg caaccttcaa gtgccgctgc acgcccatcc attcgaacca gcggtaaaac
     7321 tcgtcaaacg cttcggggac gggcaagccg gcagcccgcg ccttttccca gtagcggata
     7381 accaagtcca agacaaattc ttcttcccat tcgataaagg catcgcgcaa cagcgacacc
     7441 aaatcgtagg aaatcgggcc gtaaagcgcg tcttggaagt ctaaaacgcc cggtctgccg
     7501 cgcgtcagca tcaggttgcg gacgataaag tcgcggtgca catagacttt gggctgcgcc
     7561 aacaggggcg gcagcagcgt atcgacggtt tgctgccaaa gttggcgttg tttgaatgtt
     7621 aattcgcgcc ccaattcttt tgcgacaaac cattccggga acaggttgat ttcgcgcagc
     7681 atcgtttcac ggtcatattc gggcaaaacc ccttcacggc ttgccttctg caattcgacc
     7741 agctcgccga ttgcctccaa aagcagggct ttgtgcgccg cttcgccctg ctcctgaagc
     7801 atcgcggtca aaaacgtcgt attgcccaag tcgttcaata ccacaaaccc caaatccgtg
     7861 tccgcgtgca atacctgcgg tacattgacc atgtcaaaca gtttctgcac tttcaaataa
     7921 ggtgcgacac tcatcttgtc gggcggtgca tccatgcaga cgacactgct gccgtctgaa
     7981 aacgttgcac ggaaatagcg gcggaaatca gcatccgccg ccgcgaagga cagatcgaag
     8041 tcccgttcgg gatagatggt ctgaagccaa tttttcagtt cggtttgccg ttgcataaca
     8101 gtactaaagc atttcaggtt acaataaacg ctattctaac tggcaaaccg acttgagggg
     8161 cgattttggc tcgtttattt tcactcaaac cactggtgct ggcattgggc ttctgtttcg
     8221 gcacgcattg cgccgccgcc gatgccgttg cggcggagga aacggacaat ccgaccgccg
     8281 gaggaagcgt tcggagcgtg tccgaaccca tacagcctac cagcctgagc ctcggttcga
     8341 cctgcctgtt ttgcagtaac gaaagcggca gccccgagag aaccgaagcc gccgtccgag
     8401 gcagcggcga agcatccatc cccgaagact atacgcgcat tgttgccgac aaggtggaag
     8461 gacagtcgca ggtgcaggtg cgtgccgaag gcaacgtcgt cgtcgaacgc aaccggacga
     8521 ccctcaatac cgattgggcg gattacgacc agtcgggcga caccgttacc gcaggcgacc
     8581 ggttcgccct ccaacaggac ggtacgctga ttcggggcga aaccctgacc tacaatctcg
     8641 agcagcagac cggggaagcg cacaacgtcc gtatggaaac cgaacacggc ggacggcggc
     8701 tgcaaagcgt cagccgcacc gccgaaatgt tgggcgaagg gcattacaaa ctgacggaaa
     8761 cccaattcaa cacctgttcc gccggcgatg ccggctggta tgtcaaggcc gcttccgtcg
     8821 aagccgatcg ggaaaaaggc ataggcgttg ccaaacacgc cgccttcgtg ttcggcggcg
     8881 ttcccatttt ctacacccct tgggcggact tcccgcttga cggcaaccgc aaaagcggcc
     8941 tgcttgttcc ctcactgtcc gccggttcgg acggcgtttc cctttccgtt ccctattatt
     9001 tcaaccttgc ccccaatctc gatgccacgt tcgcgcccag cgtgatcggc gaacgcggcg
     9061 cggtctttga cgggcaggta cgctacctgc ggccggatta tgccggccag tccgacctga
     9121 cctggctgcc gcacgacaag aaaagcggca ggaataaccg ctatcaggcg aaatggcagc
     9181 atcggcacga catttccgac acgcttcagg cgggtgtcga tttcaaccaa gtctccgaca
     9241 gcggctacta ccgcgacttt tacggcaaca aagaaatcgc cggcaacgtc aacctcaacc
     9301 gccgtgtatg gctggattat ggcggcaggg cggcgggcgg cagcctgaat gccggccttt
     9361 cggttctgaa ataccagacg ctggcaaacc aaagcggcta caaagacaaa ccgtatgccc
     9421 tgatgccgcg cctttccgcc gattggcgca aaaacaccgg cagggcgcaa atcggcgtgt
     9481 ccgcacaatt tacccgcttc agccacgaca gccgccaaga cggcagccgc ctcgtcgtct
     9541 atcccgacat caaatgggat ttcagcaaca gctggggtta cgtccgtccc aaactcggac
     9601 tgcacgccac ctattacagc ctcaaccgct tcggcagcca agaagcccga cgcgtcagcc
     9661 gcactctgcc cattgtcaac atcgacagcg gcgcaacttt tgagcggaat acgcggatgt
     9721 tcggcggcgg agtcctgcaa accctcgagc cgcgcctgtt ctacaactat attcctgcca
     9781 aatcccaaaa cgacctgccc aatttcgatt cgtcggaaag cagcttcggc tacgggcagc
     9841 tctttcgcga aaacctctat tacggcaacg acaggattaa caccgcaaac agcctttccg
     9901 ccgccgtgca aagccgtatt ttggacggcg cgacggggga agagcgtttc cgcgccggca
     9961 tcggtcagaa attctatttc aaggatgatg cggtgatgct tgacggcagc gtcggcaaaa
    10021 aaccgcgcaa ccgttccgac tgggtggcat ttgcctccgg cagcatcggc agccgcttca
    10081 tcctcgacag cagcatccac tacaaccaaa acgacaaacg cgccgagaac tacgccgtcg
    10141 gtgcaagcta ccgtcccgca cagggcaaag tgctgaacgc ccgctacaaa tacgggcgca
    10201 acgaaaaaat ctacctgaag tccgacggtt cctattttta cgacaaactc agccagctcg
    10261 acctgtccgc acaatggccg ctgacgcgca acctgtcggc cgtcgtccgt tacaactacg
    10321 gttttgaagc caaaaaaccg atagaggtgc tggcgggtgc ggaatacaaa agcagttgcg
    10381 gctgctgggg cgcgggcgtg tacgcccaac gctacgttac cggcgaaaac acctacaaaa
    10441 acgctgtctt tttctcactt cagttgaaag acctcagcag tgtcggcaga aaccccgcag
    10501 acaggatgga tgtcgccgtt cccggctaca tccccgccca ctctctttcc gccggacgca
    10561 acaaacgacc ctgaccgtcg gaaacccggc aggagcaccg ttcccgcaca agacggcatt
    10621 ccaccgacaa ccccaaaccc gccatcaaag gtaggattca aacgataagg aaagaatgat
    10681 gaaaatcaaa gccctgatga ttgccgccgc attgctggca gcagccgatg tccacgccgc
    10741 accgcaaaag gcaaaaaccg catccgccaa agttgccaaa gttgccaaag ttgccaaagt
    10801 tgccgccacg gcgcaaaaag aagccgcacc cgcacaacag cagggcggta tccgcttttc
    10861 agacggcatt gccgccgttg ccgacaacga agtcatcacg cgccgccggc ttgccgaagc
    10921 cgttgccgaa gccaaagcca acctgcccaa agaggcgcag ataagcgaat ccgagctgtc
    10981 ccgacaggtg ctgatgcagc ttgtcaacca atccctgatt gtacaggcgg gcaaacgccg
    11041 caacattcaa gcaagcgaag cggaaatcga tgccgtcgtc gcaaaaaatt ccgccctcaa
    11101 aaacctcagc cccgcccaac gccgcgattt tgccgacaac atcattgccg aaaaagtccg
    11161 ccagcaggca gtgatgcaga acagccgcgt gagcgaagct gaaatcgatg ccttcctcga
    11221 gcaggcgcaa aaacaaggca tcaccctgcc cgaaggcgca ccgttgcgcc aataccgcgc
    11281 ccaacacatc ctgattaaag ccgacagcga aaacgccgcc gtcggcgcgg aaagcaccat
    11341 ccgcaaaatc tacggagagg cccgcagcgg cacagacttt tccagcctag cgcgccaata
    11401 ttcgcaagac gcgagcgcgg gcaacggcgg agatttgggc tggtttgccg acggcgtgat
    11461 ggttcccgcc tttgaagaag ccgtccacgc gctcaaaccc ggacaggtcg gcgcgcccgt
    11521 ccgcacccaa ttcggctggc atatcatcaa attgaacgaa gtgcgcgatg ccggcacacc
    11581 tcaggaacgt atccgcaatt ccgtgcggca atacatcttc caacaaaaag ccgaacaggc
    11641 aaccgtcaac ctgttgcgtg acctgcattc cggcgcgtat gtcgacatcc gctaaggcgg
    11701 tttgaagcaa aaagccatac cgatcggcaa aaatccgggc ggtatggctt tttggatttc
    11761 gagttacttt tacaccgtca ttcatcattc ccgcgaaagc gggaatctag aaacgaaaag
    11821 taacaggaat ttatcgggaa tggctggagt ttaaaggact ggattcccgc cgtcgcggga
    11881 atgacgggat tttgggttgt ggtaatttat cggaaaaaca aaaaaaccta tgccgtcatt
    11941 cccgagcagg cgggaatccg gttatttaaa actgcagaaa tttatccgaa gcaacaacaa
    12001 tctttccatc gtcattcccg cgtaggcggg aatctagcaa cgaaaagtaa caggaattta
    12061 tcgggaaaac agaaacc
//
LOCUS       DAWEYF010000049        12025 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.049, whole genome shotgun sequence.
ACCESSION   DAWEYF010000049 DAWEYF010000000
VERSION     DAWEYF010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12025
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.049"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            188..622
                     /locus_tag="WGN93_000955"
     CDS             188..622
                     /locus_tag="WGN93_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ0226874.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(671..2014)
                     /locus_tag="WGN93_000956"
     CDS             complement(671..2014)
                     /locus_tag="WGN93_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ0226875.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSRALFDLASDGIPLAGAWLDEADTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFIQLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2019..2672)
                     /locus_tag="WGN93_000957"
     CDS             complement(2019..2672)
                     /locus_tag="WGN93_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ0226876.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2823..3113
                     /gene="gatC"
                     /locus_tag="WGN93_000958"
     CDS             2823..3113
                     /gene="gatC"
                     /locus_tag="WGN93_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ0226877.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3176..4621
                     /gene="gatA"
                     /locus_tag="WGN93_000959"
     CDS             3176..4621
                     /gene="gatA"
                     /locus_tag="WGN93_000959"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ0226878.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4618..5550
                     /locus_tag="WGN93_000960"
     CDS             4618..5550
                     /locus_tag="WGN93_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ0226879.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5593..7023
                     /gene="gatB"
                     /locus_tag="WGN93_000961"
     CDS             5593..7023
                     /gene="gatB"
                     /locus_tag="WGN93_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ0226880.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGEIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7115..8125
                     /locus_tag="WGN93_000962"
     CDS             7115..8125
                     /locus_tag="WGN93_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ0226881.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQGSSRVVHFYWGARHQDDLYALEEAQGLADRLKNACFTPVLSRPRECW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8255..8887)
                     /gene="pdxH"
                     /locus_tag="WGN93_000963"
     CDS             complement(8255..8887)
                     /gene="pdxH"
                     /locus_tag="WGN93_000963"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ0226882.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9109..10158
                     /locus_tag="WGN93_000964"
     CDS             9109..10158
                     /locus_tag="WGN93_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ0226883.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKGETRKTATQAY
                     GQKASDGIKPQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWITNGWITVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIYEQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(10227..11768)
                     /locus_tag="WGN93_000965"
     CDS             complement(10227..11768)
                     /locus_tag="WGN93_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ0226884.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKSGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSVGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMIFVKA
                     LDLFS"
BASE COUNT         3074 a         3663 c         2987 g         2301 t
ORIGIN      
        1 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatattttt gggaatctgt
       61 tttaccccaa tatataaagc accatattaa ggcggagttt cttccccact ttgaaccgaa
      121 cccggaaaag acaccgccca agccaatcct gatgctgccc cggcagccaa ccatcaagga
      181 aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt tcctgcccgt
      241 cccgcccgcc gaagccgccg tctttacttg gaaggacggc ggcggcaaca gctattcgga
      301 tgtgccgaaa cagcttcatc ccgaccagag ccaaatcctc aacctgcgga cgcgccaaac
      361 caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg gcgcggcaca
      421 ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa agaaaagaat
      481 tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa
      541 agcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat acaataacgc
      601 cgtaaacaaa tactgccgtt aatcggctct agcgcaaacc ccatgccgtc tgaaacggca
      661 cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac agcccgaatt
      721 cggacaattc gcgcccgtaa ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc
      781 tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca aaccgccaag
      841 cgcgttcggt atcggcggta taaatgcagg cacctagccc gaacggggaa tcattggcaa
      901 gggcgatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc ccgaatactt
      961 cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg ggataaaacc
     1021 agcctcgccc ttgtgggatt tttccgccgg tcaggcacac cgcgccgttt gaaacggcat
     1081 cttcaacctg cccgtgaacc cggtcccgca aatcttcgcg gtgcagcggt gcaagcgtgg
     1141 tatcgggatg tttcgggtcg cccattttca atttggcgca ttcggcgaga aacagctgaa
     1201 taaagcggtc ggctgcggct tcggttacga tgatgcgctt ggcggcgtta cacgattgcc
     1261 ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg
     1321 gcatcacgat aaaggcgttg ctgccgccga gctccaacac ggttttcttg aggtttgcgc
     1381 ccgcatgtgc cgcaagaatg cgccccgtat gcgtcgaacc ggtaaacgcc atcgcatcgg
     1441 tatcttcgac tgccttgagc gtgtccgcct catccagcca cgcgcctgcc agaggaatac
     1501 cgtctgaagc caaatcgaac aacgcccgac tgacgcgtgc cacgctgggc gcgggcttga
     1561 cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc tgccagacgg
     1621 gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcgaagcgc acctgactca
     1681 aactcgcctg cgtcgcgatg gttttgtggg caagcagttc gggggcaagg cgggcgtaat
     1741 agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcaag cagcgtccga
     1801 cttcctcaca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg tcggcaaatt
     1861 tttgcaggcg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg ccgcgcattt
     1921 tcaaatccgc cagccgccgt tcaaactccg cataatcttg agcggggcgg cggtaaagcg
     1981 tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag ttgcgggaat
     2041 atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat catacccata
     2101 atgcggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt cccggcaacg
     2161 attaaaatgg cataacaaat cgcactgacc accaaaccgg ccgcgataat caacgcgatg
     2221 tcgccgtatg ttttagccgc cgaagcgtaa ataatcacgg tcgaaatacc gcccgggccg
     2281 atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg ggcggggcgc
     2341 gcctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc
     2401 atcatcgaaa tggcgatcag cagcaccaaa atcccgccgc cgacctgaaa cgaaccgacg
     2461 ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc aatcacggca
     2521 aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct gtgcccgttg
     2581 gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa aaaagccaca
     2641 atcagcttgc cgatttccat acccaatccc attatttccc cctccttcaa acccgtgcgg
     2701 caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa ttaaaaattc
     2761 aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca aggatgcttt
     2821 tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga ctgcacctga
     2881 ctgcggaaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact atggtcgaac
     2941 agatgcaaac cattaacaca gacggcatcg aaccgatggc gcacccgcac gaggccgccc
     3001 tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat caggcgggtg
     3061 ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa taatccgaat
     3121 atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa gatttatgac
     3181 ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt ccgccgtcga
     3241 actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca acggctatat
     3301 caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac gtatcgcgca
     3361 gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt tctgccaaac
     3421 cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc cctacaccgc
     3481 caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca ccaatatgga
     3541 tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca aaaacccatg
     3601 gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg ttgccgcgcg
     3661 cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccaac ccgcatcgca
     3721 ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg gtatggtcgc
     3781 ctacgcctcc agcttcgatc aaaccggccc gatggcgcaa actgccgaag actgcgcgat
     3841 tctgttaaac gcgatggcag gtttcgaccc caaagactcc accagcctcg agcgcgaaaa
     3901 agaagactac acccgcgatt tgaaccaacc gctcaaaggt ttgaaaatcg gcctgcccaa
     3961 agaatatttc ggcgaaggca acagcgccga tgttctgacg gcattgcaaa acaccattga
     4021 tttgctgaaa gcccaaggcg cggaattgat tgaagtttcc ctgccgcaaa ccaagctgtc
     4081 catccccgcc tactacgtcc tcgcctccgc agaagccagc accaaccttt cacgttacga
     4141 cggcgtacgt tacggacacc gtgccgccca attcgccgat ttggaagaaa tgtacggcaa
     4201 aacccgcgcc gaaggtttcg gcagcgaagt caaacgccgc atcatgatcg gcacttatgt
     4261 actgtcgcac ggctactacg atgcctacta tctcaaagcc caaaaactgc gccgcctcgt
     4321 tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc cgaccgcacc
     4381 cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact tgagcgatat
     4441 ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg caggcttcag
     4501 cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg aagccaaaat
     4561 cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac gacccgaatg
     4621 aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta tgcgccttta
     4681 tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa agaaatttac
     4741 gccttcgagc agtttgtcaa cgcctcccct atccgtcagg ggctgttcct ccactgcccg
     4801 caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg caaacgccgt
     4861 ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac agacatcctg
     4921 caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga cggcatcagc
     4981 ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt atctttgcgc
     5041 gacgaagcag gcaaccggct gtatatggcg actttcgcct ttgtcggcac acacctgctg
     5101 acagcctccg tacaagggcc tgcgggtgaa gaagccaaag acactgtccg ccgcataacc
     5161 aaacaacttc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca atatttcgcc
     5221 gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt caaactgcgc
     5281 tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga atacggcgca
     5341 agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa agaccttgcc
     5401 gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct ggacaacatg
     5461 gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga cggcatccaa
     5521 acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga tattttagag
     5581 aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt ccaattgaac
     5641 accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc caacgcgcac
     5701 gccggcgtgg tggaatgtgc tttgccgggc gtactgccgg taatgaaccg tgaagtcgtt
     5761 gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa aaacgtgttc
     5821 gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag ccagttggac
     5881 ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt gaaaaccatc
     5941 aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga aggcttgaac
     6001 ggcgcgaccg gtatcgacct gaaccgcgcc ggcacgcctt tattggaagt ggtgtccgaa
     6061 cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca cagcttggta
     6121 acctggctga acatttgcga cggcaatatg gcggaaggtt cgttccgcgt cgatgccaac
     6181 gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat taaaaacctc
     6241 aattccttcc gtttcttgga gcaggcgatt aattacgaag cagaagcgca aatcgagatt
     6301 ttggaagacg gcggcaaagt acagcaggca acgatgctgt ttgatcccga aaaaggcgaa
     6361 acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc cgaccccgat
     6421 ttgctgcccg tcatcatttc agacgctcaa atgcaaaaag ccaaagcaga aatgcccgag
     6481 ctgccgaaag aaatggcagc gcgtttcgtg gcggactacg gcgtgtccga atacgacgcg
     6541 cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc caaagagagc
     6601 ggacaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc actgaacaaa
     6661 gaaggcatgg aacttgccga cagcccgatt accgctccgc gcctcgccgc gctggtaggc
     6721 aaaatcgccg acggcacatt aagcagcaaa ttagcgaaaa aagcctttga agccatgtgg
     6781 gcagaacccg aagccaccat tgccgaaatc atcgaaaaac acggtttgca acagatgacc
     6841 gacaccggcg agattgaagc catggtggac gaagtgctgg caaacaacgc caaagccgtg
     6901 gaacagttta aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca agtgatgaag
     6961 gccagcaaag gcaaagccaa ccccgcgcag gttcaagagc tgattaaagc caaactggcc
     7021 tgataagcaa gatgccgtct gaaacccaga tccgacgttc agacggcatt ttcacagtct
     7081 gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta ccctgcccga
     7141 ccaaaccacc tttgccgccg gcgacggtga aaccgttttg gccgctgccg cccgtcaaaa
     7201 cctcaatctg ccccattcct gcaaaagcgg tgtctgcgga caatgcaaag ccgaactggt
     7261 cagcggcgat attcaaatgg gcggacactc cgaacaggct ttatccgaag cagaaaaagc
     7321 gcaaggcaag attttgatgt gccgcaccac cgcgcaaagc gatatcagca tcaacatccc
     7381 cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg aaagtatggt
     7441 tttcaaacac gatgtcgccc tcctgaaact tgccctgccc aaagccccgc cgtttgcctt
     7501 ctacgccggg caatacattg atttactgct gccgggcaac gtcagccgca gctactccat
     7561 cgccaattcg cccgaccaag aaggcatttt ggaactgcac atccgcagac gtgaaaacgg
     7621 tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag gcattgtccg
     7681 cgttaaaggc ccgctcggtt cgtttacctt gcaggaagac agcggcaagc ccgtcatcct
     7741 gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc ttatccgcca
     7801 aggcagcagc cgcgtcgtcc atttctactg gggcgcgcgt catcaagatg atttgtatgc
     7861 cctcgaagaa gcacaagggt tggcagaccg tctgaaaaac gcctgcttca cccccgtatt
     7921 gtcccgcccc agagagtgct ggcaaggaag aaaaggccac gtacaagaca tcgcggcaca
     7981 agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg ctatgaccga
     8041 acaggcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt ttttctccga
     8101 cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg ctttccgttc
     8161 ggaacacaaa aaacttcccg tccgtatttt ccccgtgaaa aaatgccgtc tgaaacccga
     8221 ttcctgtttt cagacggcat atgttttttc ctgttcaagg tgacagccgc tcgcgtatcc
     8281 agccgccatc cagcaaacgg tattggatgc ggtcgtgcag cctgctcggc ctgccctgcc
     8341 aaaactcaat caaatcggga atcacaatat agccgcccca atgcggcgga cgcggcacgt
     8401 gcaaaggatg tttgagtccg accgccgccg cctttgccac caataccgcc ttgttcggaa
     8461 tcacttcgct ctgcgcgctt gcccacgcac ccaaacggct ctgatacggg cggctctcaa
     8521 aatattcgtc cgacaatttc tccgccagcc tttcaacacg cccttccacg cgcacctgac
     8581 gctccagctc cggccaaaaa aacgtcatcg ccgcaaatgg atgagcatcc agcgaacgcc
     8641 ccttgcggct gtgataattc gtaaagaaaa caaaaccttc agaattaact tccttcagca
     8701 gcaccatacg gctgttgggt ctgccgcgtc cgtcgaccgc cgccacatta accgccgtcg
     8761 gctcgttaac ctgtgcgcgt accgcctcgt ccaaccaccg ctcgaactgc tcgatcggat
     8821 tgtcggcgca atcggcttcc gacaattccc gtttgctgta atcttcccga atattgtgca
     8881 aatccatgtt accgctcctc ttgttatttg aaagattcta cccccgcacg caaaccgatt
     8941 tcaaccgttg cacaaacttt gtccccaaag ccgcagcgac gatttcatcc gcaaaaccgc
     9001 cgcatcaggt acaatatcga accgtccgac tgaggacggc attttatcaa cccgtcctgc
     9061 cgcatacgcc gcagaagaac cgctttatca agcgagttag gaaaaatgat gtccaaacag
     9121 cccaccagca aacgccaatg gcgcgacggc gcagccccgt ctgccaagaa aaccgccaaa
     9181 cctttcaaaa gcaaagcccg tcccaaaggc gaaacgcgca aaaccgccac ccaagcttac
     9241 ggacaaaaag cttcagacgg catcaagccg caaaacgccc ccaaacagcg cgccgccaaa
     9301 gccaaaaaac tcgtcgtccg caatcccaac caaaaaatta tggaacacgc gcgcgatttg
     9361 aaagaacgcc gcagcgacct gtcgcgcatg gaacccgaac gcctgcaaaa agtgcttgcc
     9421 gcgtccggcg tcggctcgcg ccgcgaaatg gaagaatgga ttaccaacgg ctggataacg
     9481 gtcaacggca aaaccgcgca actgggcgac aaagttaccc ccgacgacca cgttaccgtc
     9541 aaaggcagca tcatcaagct caaatgggcg gaccgcctgc cgcgcatcat cctgtattac
     9601 aaacaagaag gcgaaatcgt ttcccgtgac gacccgcaag gccgcgtcag catattcgac
     9661 cgcctgccgc aggccgccag cagccgctgg gtcgccatcg gacgcttgga catcaacacc
     9721 agcggacttc tgattcttac cacctccggc gaactcgtcc aacgtttcgc ccaccccagc
     9781 ttcgaagtcg aacgcgaata cgccgtgcgc gtcttgggcg ggctgaccgg cgaacaaatg
     9841 cgcgtcctca ccgaagaagg cgtgatgctc gaagacggct tggcaaaagt cgaacgcatc
     9901 tacgaacaag gcggcgaagg cgcgaacaaa tggtacaacg tcgtaattaa agaaggccgc
     9961 aaccgcgaag tgcgccgcat attcgaaagc caaggcctca ccgtcagccg cctcgtgcgc
    10021 gtcggcttcg gtcccatcgg actgcccaac cgcctcaaac gcgggcagtt ctacgaactc
    10081 aatcccgccg aagtcgccaa catcatcaaa tgggcggaca tgctgctgcc gggcgaacgc
    10141 cgccgcaaaa aagcctaaac ccgccaaaac acaaaaatgc cgtctgaaac atctactgtt
    10201 tcagacggca ttttgttcgg gcgttttcag gagaaaaggt cgagtgcttt gacaaagatc
    10261 atcaccacgc cgtaggcgag cggtatgacg gccaatgccc aacgccacca gaccgatatg
    10321 ccgccgccgg aaactttttc gcccacaagg taagcgtcgg atatggcggt ttcgtcatcg
    10381 gggttgccgc tgtgtgcggc ggttttgatg tctttttcgt ggtgtttttc gtgtacggat
    10441 ttgacggcga ggttgcacaa caaaccgata atcagcagac ccgccatgat gtacatggtt
    10501 acgctgtatg cctgtgccgc cggtatgccg ctgtcgattt ggctttggcg tatgtaattg
    10561 accagtaccg ggccgatgac ggcggcggtt gaccaggcca gcaggatgcg cccgtgaatc
    10621 gcgccgacct gataggtgcc gaacaggtct ttcaggtagg cgggaatggc ggcaaatccg
    10681 ccgccgtaca tggaaataat cacgcaaaag ccgatgatga acagggcttt gctaccaccc
    10741 tcgccgatgg agggaacggc gaaatacagc agcgaaccga gtacgaagaa aatggtgtag
    10801 gtgtttttgc gtccgatttt gtcggaaacg ctcgaccata aaaagcgtcc gcccatgtta
    10861 aacaggctaa ggaggctgac gaagcctgcc gccgcacctg caccgactgc cgcctgcctg
    10921 cctacggagg tttcggaaaa gagttcctga atcatcacgg atgcctgacc caatacgccg
    10981 atgccggcag ttacgttcag gcacaatacc cagaacaaca gccaaaactg cggcgttttc
    11041 atggcttggg acacgttgac atgattgctg ctgaccagct tgttttgcgt tttcggcgcg
    11101 gtatagcctt caggtttcca gccgtcggca ggtacgcgga tggtaaacgc gccaaacatc
    11161 atcagtgcga ggtaaagcag acccaatacg gcgaaggttt cggcaacccc aaccgaagca
    11221 gcgtttgaaa aggcgttcat cagtgatacg gaaagcggcg aggccagcat tgcgccgccg
    11281 ccgaaaccca taatcgccaa accggtcgcc atacccgact tgtcgggaaa ccatttcatc
    11341 agtgtggaaa ccggcccgat gtagcccaaa cccaagccta cgccgccgat gacgccgttg
    11401 cccaaataga gcaggaagag gttgtgcgta cgcacgccga atgcggatac gaagaagccc
    11461 aggctgaagc agcaggcggc ggcaaatatg gctttgcgcg gccctacccg ttccatccac
    11521 gtaccgaaca gggcggccga cgcgcccagc atcgcgagtg cgatactgaa aatccaacct
    11581 acggtcgtca gcttccaatc tccggccgcc gattcggtta tgccgataag tttggtcagc
    11641 ggcgcgttga atacggaata ggcgtaaatc tgcccgatgg caaggtgcac cgccaatgct
    11701 gcgggcggta cgagccaacg gttgaaaccc ggcttggcaa tgcttgcctc acggtctaaa
    11761 aacttcataa catcctcttt ctgtcagttg aaaaataaaa tttcatttgc tcaatggaaa
    11821 cttattgaaa actataaaaa aatatcggat cggtttttta tccgccccaa gatgccccgt
    11881 ctgaaacatt tcgggtgtac ggaaaggttt ctgttttttc cgacaaattc ctgcggcttt
    11941 tcgcttccgg attcccgctt ttgcgggaat gacgaattaa agattatctt aaggtcaagg
    12001 gactggattc ccgctttcgc gggaa
//
LOCUS       DAWEYF010000050        11993 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.050, whole genome shotgun sequence.
ACCESSION   DAWEYF010000050 DAWEYF010000000
VERSION     DAWEYF010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11993
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.050"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..658
                     /locus_tag="WGN93_000966"
     CDS             <1..658
                     /locus_tag="WGN93_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ0226885.1"
                     /translation="CDLWTNINTTGLEAEGNVELKNGKKPESLIETIIKLATNENDIV
                     LDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERMKKVIEGEQGGISKAVNWQGG
                     GEFVYAELAPFNETAKQQILACENSDGIKMLFEGLCERYFLKYNVSVNEFGQIIQEPE
                     FQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEKKDGE
                     "
     gene            648..3428
                     /locus_tag="WGN93_000967"
     CDS             648..3428
                     /locus_tag="WGN93_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ0226886.1"
                     /translation="MANNKTLFEVIENRKAVYLEDGDDEKCRLPEFVERNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPAHAKFLFTEKILQGDQVIPIRKVETFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQGELDLEKEIND
                     RTSNAEIERKGWEHMVLELLLNKNGNPSENVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYSAFLNWAENIQADNFSFLTTFWASLNDSDNANEQGKTRTEQALKFMQDNK
                     FGFAHLANWVKQNYQKHNIIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFAANKDFRELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQETQ
                     FTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLD
                     IQNRNELQNNLLKDWQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFIGT
                     KEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISARL
                     GDLKSQYDIHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVKDFLHYQIFI
                     EPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTES
                     FPLGAASLEKMK"
     gene            complement(3572..4744)
                     /locus_tag="WGN93_000968"
     CDS             complement(3572..4744)
                     /locus_tag="WGN93_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ0226887.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            5094..5540
                     /gene="iscR"
                     /locus_tag="WGN93_000969"
     CDS             5094..5540
                     /gene="iscR"
                     /locus_tag="WGN93_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ0226888.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            5569..6783
                     /locus_tag="WGN93_000970"
     CDS             5569..6783
                     /locus_tag="WGN93_000970"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ0226889.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            7047..7433
                     /gene="iscU"
                     /locus_tag="WGN93_000971"
     CDS             7047..7433
                     /gene="iscU"
                     /locus_tag="WGN93_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ0226890.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKGDDSVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            7520..7840
                     /gene="iscA"
                     /locus_tag="WGN93_000972"
     CDS             7520..7840
                     /gene="iscA"
                     /locus_tag="WGN93_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ0226891.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(7800..8021)
                     /locus_tag="WGN93_000973"
     CDS             complement(7800..8021)
                     /locus_tag="WGN93_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ0226892.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            8103..8603
                     /gene="hscB"
                     /locus_tag="WGN93_000974"
     CDS             8103..8603
                     /gene="hscB"
                     /locus_tag="WGN93_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ0226893.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            8701..11451
                     /gene="gyrA"
                     /locus_tag="WGN93_000975"
     CDS             8701..11451
                     /gene="gyrA"
                     /locus_tag="WGN93_000975"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ0226894.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            11608..11993
                     /locus_tag="WGN93_000976"
                     /pseudo
     CDS             11608..11993
                     /locus_tag="WGN93_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         3587 a         3044 c         2698 g         2664 t
ORIGIN      
        1 atgcgattta tggacaaata taaatacaac aggactagaa gcagaaggaa atgtagagtt
       61 aaaaaatggt aaaaagccag aaagtttaat tgaaactatt attaaactag caaccaacga
      121 aaacgacatc gtcctagact accatttagg tagtggcaca accgctgccg ttgctcacaa
      181 aatgaaccgc caatatattg gtattgaaca aatggattat attgaaacgc ttgccgttga
      241 acgcatgaaa aaagtgattg aaggcgagca aggtggtatt tccaaagccg tgaattggca
      301 aggtggtggc gagtttgtct atgccgagct tgctccattt aacgaaaccg caaaacaaca
      361 aattttggct tgcgaaaatt cagacggcat caaaatgctg tttgaaggtt tatgcgaacg
      421 ctatttccta aaatacaatg tgagcgtaaa tgagtttggt caaatcattc aagagcctga
      481 atttcaatct ttgccattag acgaacaaaa acaaatggtg cttgaaatgt tggatttaaa
      541 tcaaatgtat gtttcattat ccgaaatgga cgatgaacaa tttgcaggct gcttgaatga
      601 tgatgataaa gccttaagcc gtgcgttcta tcaagcggag aaaaaagatg gcgaataata
      661 aaactttgtt tgaagtgatt gaaaaccgca aagctgtgta tttggaagac ggcgatgatg
      721 aaaaatgcag actgcctgaa tttgtagaac gcaatttaaa atatccgttt tttgaatggc
      781 aaaaatcggc tttagaaaat tttgtgattt ttgaccgcac ttcaaaatta aaggatttcc
      841 ctgacatcaa aaaccgccct acccatttgc tgttcaatat ggcaacaggt gcaggcaaaa
      901 cgatgatgat ggcggcgttg attttgtatt attttgaaaa gggttatcgg cattttttgt
      961 ttttcgttaa tcaaaataac atcgtggata aaacggaaaa taattttatt gacccggcgc
     1021 acgcaaaatt tttatttacc gagaagattt tgcaaggcga ccaagttatt cccattcgca
     1081 aagtagaaac gtttagccca cattcagacg gcattgaaat taaatttacc agtattcaaa
     1141 aactgtataa cgatatccac accgaacggg aaaaccaaac cacattggcg gatttgcaca
     1201 aattgaacct tgtgatgctg ggcgatgaag cacaccattt aaacgcacaa accaaaggca
     1261 aaaaacaagg cgaattagat ttagaaaagg aaattaacga ccgcactagc aatgccgaga
     1321 ttgaacgcaa aggctgggag catatggttt tggaattgtt actcaataaa aatggcaatc
     1381 ctagcgaaaa tgtgctgttg gaatttaccg ccacgctacc tgaaaatgct gacgtgcaac
     1441 aaaaatacgc ggataaaatc atcacaaaat ttggcttaaa agagtttttg caaaaaggtt
     1501 ataccaaaga aatcaatttg gtatccagta cgctgggcaa gaaagagcgg gtgttgcacg
     1561 ctttattgtt tgcttggtat cgccatcaaa tcgcgttgaa atacggcatt gccaatttca
     1621 agcctgtgat gttgtttaga agtaagacga ttgatgaatc aaaagcggat tattcggcgt
     1681 ttttaaattg ggcagaaaat atacaggcgg ataatttttc gtttttaacg acattttggg
     1741 caagcttaaa cgatagcgat aacgccaacg aacaaggtaa aacccgcacc gaacaagccc
     1801 taaaatttat gcaggacaat aaatttgggt ttgcacattt agcaaattgg gtaaaacaaa
     1861 attatcaaaa acacaatatc attattacca actccgaaac caacaaaacc aaaaccgaaa
     1921 aaaccgacag cgaaacggaa aaattgctga ataatttgga agcggctgat aatccgatcc
     1981 gtgccatttt tacggtggat agattaactg aaggttggga cgttctgaat ttgtttgata
     2041 ttgtgcgttt gtatgaaggg caaaatggcg gtggttcaaa taaaaaatca ggcaaaacgg
     2101 ctgccgctac cgtatcggaa aagcagttga ttggtcgtgg cgtgcgttat tttccatttg
     2161 cgtttgaagg taaacagccg aataaacgca aatttgacaa cgacatgcaa cacgaattgc
     2221 gtatcttgga agaattgttt tattacacgc acgatgagca atcccgctat atttcagaac
     2281 tgaaaaatga gttgcgaaaa gacggttatt tgcctgaaaa agacgatgat aaggtattgg
     2341 caacatttaa actcaaatct gaatttgccg ctaataagga ttttagagaa ttgttaattt
     2401 gggcgaataa aaaaatcccc aacccaaacg ccaaaagcaa taatgcagac agcctaaaag
     2461 ccaatccaca aacgctttca ttccaagttc acggtaatca actgttgcag gaaacgcaat
     2521 ttacagccga tgaaaatgat gaaacagccc gacaaatcgg cacacaaaat aattttactc
     2581 aaaccataaa aatgagtgaa atggagcggc acattttcaa taaagcatta catatcaaag
     2641 ggaaaaatag tcaatcttta ttccatttca accgtttgca aagcaagctc gacattcaaa
     2701 atcgcaatga attgcaaaat aacttgttga aagactggca aattgaattt ttaggattag
     2761 ggcaagacaa acaggttcgc ctggacgata aacttgcagg ctgcctgaaa atcttggaaa
     2821 tggttgaaaa acatctgaat gaaagtgata tgccgtttat cggtacaaaa gaatttacac
     2881 ctaaaaaatt atgggaaatt ttcggcacgc caaaacaaaa atgggtcaaa aaagatgatg
     2941 taaaaacgac tattgccacg caaaatgatt ggtatgtgat gaataatttt gccggaacgg
     3001 gtttggaaga agcgttaatt caatttattt cagcgcgttt gggcgatttg aaatctcaat
     3061 atgacattca tttaatccgt aatgaagaag tgtttaaatt gaataacttt gccgatggtg
     3121 aaggatttat gccggacttt attttattgc tgaaagataa acaaaaatct tcttccaatg
     3181 gcgtgaagga ctttttgcat taccaaattt tcattgagcc caaaggtgag catttagtgg
     3241 aaactgatgg atggaaagaa gaatttttag aagccatcac tgtggaatat gggatggata
     3301 agatcctgca aaaagataca ccgcattatc gtttgatcgg tttaccgttt tttactgatc
     3361 atcagaaaaa tggacaattt acggagtcat tccctttagg tgcggcatcg cttgaaaaaa
     3421 tgaagtagtg cattgcaggc aaccccgttt gacaaaactt cctttacaaa agggcgtttt
     3481 gtcagatatt taatcaacac attattaaaa tacagccaaa ttttaatgcc gtccgaaccc
     3541 tgtgttcaga cggcatcgta tttttcagta tctaaaccgt ttccctgccc caatctttgc
     3601 ctctcaaaat cgaagcatcg acatcttgaa tatcgcggtg tcccgtaaac gccatagata
     3661 tatccatttc tttatacagg atttccagcg cacgggttac gccttcttca ccatacgcac
     3721 ccaaaccata cagaaacgcc cgacctatca ttgtaccttt cgcgcccaaa gcccacgcct
     3781 tcaaaatatc ctgaccgctg cggatgccgc tgtccatcca aacttcgatg tcgctgccca
     3841 ctgcgctgac gatgtcgggc aaggctttga tggcagacac ggtatcgtcg agctgtcggc
     3901 cgccgtggtt ggaaacaatc aatgcgtccg cgccgctttt cgctgctttt tccgcgtctt
     3961 cgggttccat aatgcctttg ataatcagct tgccgcccca caaatcttta atgcgcgcca
     4021 catcgtccca gctcaggcgc gggtcgaatt gttcggaagt ccatgaagac agcgaagaca
     4081 aatcgccgac gttcttcgcg tgtccgacga tattgcggaa cgtgcggcgt tccgtgttca
     4141 gcattttcat gcaccattcc ggtttggtcg ccagattgat taaattggcg atggtcggtt
     4201 tcggcggcgc ggacaggccg tttttgatgt ctttgtggcg ttgacccaaa acctgcaaat
     4261 cggcggtcaa taccaatgcc gaacatttgg catccttcgc gcgcttaatc aggttttcca
     4321 taaactcgcg gtcgcgcatc acataaagct gaaaccaaaa tggtgcggaa gtgttctcgg
     4381 caacgtcttc aatcgagcag atagacatcg tggacaacgt aaacggaatg ccgaacttct
     4441 ccgccgcccg cgccgccaag atttcaccgt cggcgtgtgc cataccggta aaacccgtcg
     4501 gcgcaatcgc caccggcatt ttcacatcct gcccgatcat tttggtttcc aggcttcgac
     4561 cttccatatt gaccaatacc ttttgtcgga agcggatatc tttaaaatcc gaagtgtttt
     4621 cgcggtaggt agtttccgtc cacgaacccg aatcgatgta atcgtaaaac atacgcggca
     4681 ttttgcgctt ggcaacgcgg cgcaagtctt cgatgcaggt cattttgctc aaatcacgtt
     4741 tcatcttgtt tttccctgtt tgacagcctg atggaatatg ccgtccgaaa ccgcttgagc
     4801 cttcagacag catttcaggc aatacccaaa taaatcacta agatttagat aatctatatc
     4861 aatatcaaaa ataaatcaaa tcgttttgaa accgcttgcc ggcaaaatac cccgaccacc
     4921 gctcctcaaa aaacataacc aactgattta aaaaaccaaa caaataaagc aaaatcagac
     4981 tataccgcca tttaaacaaa caatcggcaa cagctccccc ttacttgact gaaacactca
     5041 gatattggac aattctcccc actataaaaa agccgacacg ggcaaccacc accatgagac
     5101 tgaccaccaa agggcgtttt gccgttaccg ctatgctgga tttggcgatg aacgcgcaaa
     5161 ccggcgccgt caaactcagt gccatcagcg aacgccaaaa catatccctc tcctatctcg
     5221 agcaattgtt cggcaaactc cgccgcgccg gactggttga aagcctgcgc gggcccggcg
     5281 gcggctacat cctcgccgca ccggcggcac gcatcaacat cgcccaaatc atcgccgccg
     5341 ccgaagaccg gctggacgcg acccaatgcg gcagcaaagc caactgccac cacggcgcgc
     5401 cctgcctgac gcacgatctt tgggagaatt taaacaaaac catcaacgac tacctcggca
     5461 gcgttaccct gcaaagcatc atcgaacaga aaaacaacgg cgacggcagc cgcgtcgtcc
     5521 aatttacaca catccattaa ataacacccg aaaaagaaag agcaaaccat gaccgtcaaa
     5581 acccccgttt acctcgacta cgccgccacc acccccgttg acaaacgcgt tgccgaaaaa
     5641 atgattccct atctgaccga aaccttcggc aacccagcct ccaacagcca cagcttcggc
     5701 tgggaagcag aagaagctgt agaaaaagca cgtgcagaca ttgccgccct gattaacgcc
     5761 gactctaaag aaatcgtttt caccagcggc gcaaccgagt ccaacaacct cgctatcaaa
     5821 ggcgcggcgc acttctacaa atctaaaggt aatcacctca tcactgtaaa aaccgaacac
     5881 aaagccgtac tcgacaccat gcgcgaactc gaacgccaag gttacgaagt aacttatctg
     5941 gacgtacaag aaaacggttt ggttgattta gacgtactga aagccgccat ccgcgaagac
     6001 accatcctcg tttccgtaat gtgggtaaac aacgaaatcg gcgtggttca agatattcct
     6061 gccatcggcg aaatctgccg cgaacgcaaa atcattttcc acgttgacgc agcacaagca
     6121 tgcggcaaag tgcctgtcga tgtcgaagcc gccaaaatcg acctgctctc gatgtccgcg
     6181 cacaaagtgt acggccccaa aggcatcggc gcgctgtacg tccgccgcaa accccgcgtc
     6241 cgcctcgaag cccaaatgca cggcggcggc cacgaacgcg gcttccgcag cggcacattg
     6301 ccgacccacc aaatcgtcgg tatgggcgaa gccttccgca tcgccaaaga agaactcgaa
     6361 caagatatgg cgcactaccg caaactgcgc gacatcttcc tcaaaggcat cgaaggcatc
     6421 gaagaagtct atgtcaacgg cgacctcgaa caccgcgccc cgaacaacct gaacgtcagc
     6481 ttcaacttcg tcgaaggcga aagcctgatt atggcggtga aagaactcgc cgtatccagc
     6541 ggctccgcct gtacttctgc cagtctcgaa cccagctacg tcctgcgcgc gctcggccgc
     6601 aacgatgaac tggcgcactc atccctgcgc atcaccttcg gtcgcatgac caccgaagaa
     6661 gaagtgcaat tcgccgccga actgattaaa tccaaaatcg gcaaactgcg cgaactgtcg
     6721 ccgctgtggg aaatgttcaa agacgggatt gatttgaact cgattgaatg ggcagcgcat
     6781 taaagcgtac caacatgccg tccgaacctt tagacggcat tccaaaaaca aagcaatcaa
     6841 gagaaaatat gaacgaacaa gatttagatt tggacaatct cgacaacctg cttgaagatt
     6901 ttgacggcgt taccgtggaa ggcggcgtcg attcggaaaa cgacgacggc tgcgaaggcg
     6961 gggcgtgcaa aatctaaact tcaggccgtc tgaaaatcgg caaacaaacc acttaaacca
     7021 tcaaaaaaca ttaaggaaac cacatcatgg catacagcga taaagtaatc gaccactatg
     7081 aaaatccgcg caacgtcggc acattcgaca agggagacga ttccgtcggc accggcatgg
     7141 tcggcgcgcc cgcctgcggc gacgtcatgc gcctgcaaat caaagtgaac gacgagggca
     7201 tcatcgaaga tgcgaaattt aaaacttacg gctgcggctc ggccatcgct tcgtccagcc
     7261 tgattaccga gtgggttaaa ggcaaaagcc tggatgacgc gctggcaatc aaaaacagcg
     7321 aaatcgccga ggagttggaa ttgccgccgg taaaaatcca ctgctccatc ttggctgaag
     7381 atgcggtaaa agcggccgtt gccgactacc gcaaacgtca ggaaaacaga taaagccctt
     7441 cagacggcat catcccgcaa tgccgtccga accacccgcc gcttcaggtc cgtccggggc
     7501 ggtacaacaa ggaagaaata tgattaccct taccgagaat gccgcaaaac acatcaatga
     7561 ctatctcgcc aaacgcggca aaggcttggg cgtacgcttg ggtgtgaaaa ccagcggctg
     7621 ctcggggatg gcgtacaacc ttgaatttgt cgacgaagcc gatggcgacg acctgatttt
     7681 cgaaggacac ggcgcgcgca tttatatcga tccgaaaagc ctggtttatc tggatggcac
     7741 gcaagtcgat tacaccaaag aaggtttgca ggaaggtttc aaatttgaaa accccaatgt
     7801 caaagactcc tgcggctgcg gcgaaagctt ccacgtttaa ggcataaaaa cggcgggacc
     7861 gtatcaaaac cgtcccgcca ttttttcgct tcctgcctgt tgtagctgcc tttgcctttc
     7921 cttttccgtt ccaccttgtg ccggaacaaa tcggatttca ctaaggcttt taaagcattg
     7981 tcgcgtattt tgcctttatt gtgctgcact ttgccgccca tattcagtcc tttcgtttaa
     8041 gaagcggcag attataaggc aaaaacagtt ttctgccaaa atcttacatt tatcatccta
     8101 ctatgtccca atatttcacc ctcttccgga ttgaacccgc tttcgatatc gacaccgaaa
     8161 acttggaaca aacctaccgc gccttggccg cccgtttcca tcccgataaa ttcgcttcag
     8221 cttccgcctt tgagcaaaag caggcagtga tgatgtcttc caccatcaac gatgcctacc
     8281 gcaccttgaa aaaccccatc gaccgcgccg cctacctgct gaaaacatcg ggcatcgatg
     8341 ccgacgcgcc ggagcatacc gctttcgccc ccgaattcct tatgcagcaa atggaatggc
     8401 gcgaaacgct gatggaggca cgggcaggca acgaccttga atccttgaaa aatctcgaca
     8461 acgaaatccg cgacgaacaa gaaaaactgt tctgcggtct gaaacagtcg tttgcccgac
     8521 aagattacga cacagccgca caacaagtcc gccaaggcag gtttctcgac aaactccgca
     8581 acgaaatttc ctcggcatta taatccgcac cgtgtttcag acggcgtaac cgccgcaccg
     8641 ttccgcgtca aaatatgcta aaataagcaa caattttttg ccatacgaaa cattgaaacc
     8701 atgaccgacg caaccatccg ccacgaccac aaattcgccc tcgaaaccct gccggtaagc
     8761 cttgaagacg aaatgcgcaa aagctatctc gactacgcca tgagcgtcat tgtcgggcgt
     8821 gcgctgccgg acgttcgcga cggtctcaag ccggtacacc gccgcgtact gtacgcgatg
     8881 cacgaattga aaaacaactg gaatgccgcc tacaaaaaat cggcgcgcat cgtcggcgac
     8941 gtcatcggta aataccaccc ccacggcgat accgccgtat acgacaccat cgtccgtatg
     9001 gcgcaaaatt tcgctatgcg ttatgtgctg atagacggac agggcaactt cggatcggtg
     9061 gacgggcttg ccgccgcagc catgcgctac accgaaatcc gcatggcgaa aatttcccac
     9121 gaaatgctgg cagacattga ggaagaaacc gtcaatttcg gcccgaacta cgacggtagc
     9181 gaacacgagc cgcttgtact gccgacccgt ttccccacac tgctcgtcaa cggctcgtcc
     9241 ggcatcgccg tcggcatggc gaccaatatc ccgccgcaca acctttccga taccgtcaat
     9301 gcctgcctgc gcctgctcga tgcacccgac accgaaatcg acgaactgat cgacattatc
     9361 caagcccccg acttcccgac cggggcaacc atctacggct tgagcggcgt gcgcgaaggc
     9421 tataaaacag gccgcggccg cgtcgttatg cgcggtaaga cccatatcga acccataggc
     9481 agaaacggcg aacgcgaagc catcgttatc gacgaaatcc cctatcaggt caacaaagcc
     9541 aagctggtcg agaaaatcgg cgatttggtt cgggaaaaaa cactggaagg catttccgag
     9601 ctccgcgacg aatccgacaa atccggtatg cgcgtcgtta tcgagctgaa acgcaacgaa
     9661 aatgccgaag tcgtcttaaa ccaactctac aaactgactc cgctgcaaga cagtttcggc
     9721 atcaatatgg tggttttggt cgacggacaa ccgcgcctgt tgaacctgaa acagattctc
     9781 tccgaattcc tgcgccaccg ccgcgaagtc gttacccgac gtacgctttt ccggctgaag
     9841 aaggcacgcc atgaagggca tatcgccgaa ggcaaagccg tcgcactgtc caatatcgat
     9901 gaaatcatca agctcatcaa agaatcgccc aacgcagccg aggccaaaga caaactgctt
     9961 gcgcgccctt ggcgcagcag cctcgttgaa gaaatgctga cgcgttccgg tctggatttg
    10021 gaaatgatgc gtccggaagg attggctgca aacatcggct tgaaagagca aggttattac
    10081 ctgagcgaga ttcaggcaga tgctatttta cgcatgagcc tgcgaaacct gaccggcctc
    10141 gatcaagaag aaattgtcga aagctacaaa aacctgatgg gtaaaatcat cgactttgtg
    10201 gatatcctct ccaaacccga acgcattacc caaatcatcc gcgacgaact ggaagaaatc
    10261 aaaaccaact atggcgacga acgccgcagc gaaatcaacc cgttcggcgg cgacattgcc
    10321 gatgaagacc tgattccgca acgcgaaatg gtcgttaccc tgacacatgg cggctatatc
    10381 aaaacccagc cgaccaccga ctatcaggcg cagcgtcgcg gcgggcgcgg caaacaggcg
    10441 gctgccacca aagacgaaga ctttatcgaa accctgtttg ttgccaacac gcatgattat
    10501 ttgatgtgct ttaccaattt gggcaagtgt cattggatta aggtttacaa actgcccgaa
    10561 ggcggacgca acagccgcgg ccgtccgatt aacaacgtca tccagttgga agaaggcgaa
    10621 aaagtcagcg cgattctggc agtacgcgag ttccccgaag accaatacgt cttcttcgcc
    10681 accgcgcagg gaatggtgaa aaaagtccaa ctttccgcct ttaaaaacgt ccgcgcccaa
    10741 ggcattaaag ccatcgcgct caaagaaggc gactacctcg tcggcgctgc gcaaacaggc
    10801 ggtgcggacg acatcatgct gttctccaac ttaggtaaag ccatccgctt caacgaatac
    10861 tgggaaaaat ccggcaacga cgaagcggaa gatgccgaca tcgaaaccga aatttcagac
    10921 ggcatcgaag atgaaaccgc cgacagcgaa aacgcactgc cgagcggcaa acacggtgtt
    10981 cgcccgtccg gtcgcggcag cggcggtttg cgcggtatgc gcctgcctgc cgacggcaaa
    11041 atcgtcagcc tgattacctt cgcccctgaa accgaagaaa gcggtttgca agttttaacc
    11101 gccaccgcca acggatacgg aaaacgcacc ccgattgccg attacagccg caaaaacaaa
    11161 ggcgggcaag gcaatattgc cattaacacc ggcgagcgaa acggcgattt ggtcgccgca
    11221 accttggtcg gcgaaaccga cgatttgatg ctgattacca gcggcggcgt acttatccgc
    11281 accaaagtcg aacaaatccg cgaaaccggc cgcgccgcag caggcgtgaa actgattaac
    11341 ttggacgaag gcgaaacctt ggtatcgctg gaacgtgttg ccgaagacga atccgaactc
    11401 tccgacgctt ctgtaatttc caatgtaacc gaaccggaag tcgagaactg aaaatcatct
    11461 cccgatgccg tctgaagatt cagacggcat ttattttatc cctcatccgt catccagctt
    11521 ctcacaatat agcggattat agtcaattaa aaacaagggg ctgtcctaga taactaggga
    11581 aattcaaatt aagttagagt tgcccctatg agaaaaagtc gtctaagccg gtataaacaa
    11641 ataaactcat tgaactgttt gtcgcaggtg taactgcaag aacgacagca gagttagtag
    11701 gcgttaataa aagtaccgca gcctattatt ttcatcgttt acgattactt atttatcaaa
    11761 acagtccgca tttggaaatg tttgatggcg aagtagaagc agatgaaagt tattttgctg
    11821 aacgacaaaa ccatattaat ggaattgaga acttttggaa ccgggcaaaa cgtcatttac
    11881 gcaagtttga cggcattccc aaagcgcatt ttgagctgta tttaaagggg tacgaacggc
    11941 gttttaacaa cagtgagata aaagttcaaa tttccatttt aaaacaatta gta
//
LOCUS       DAWEYF010000051        11702 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.051, whole genome shotgun sequence.
ACCESSION   DAWEYF010000051 DAWEYF010000000
VERSION     DAWEYF010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11702
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.051"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(15..218)
                     /locus_tag="WGN93_000977"
     CDS             complement(15..218)
                     /locus_tag="WGN93_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226895.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(196..429)
                     /locus_tag="WGN93_000978"
     CDS             complement(196..429)
                     /locus_tag="WGN93_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ0226896.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            962..4396
                     /gene="dnaE"
                     /locus_tag="WGN93_000979"
     CDS             962..4396
                     /gene="dnaE"
                     /locus_tag="WGN93_000979"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ0226897.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     EAYVGKDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELSLPVVATHPTQFMSSDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPGQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQSNRGRVIEYVREKYGAKAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITSARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMNNADQKAANTNQGGL
                     FDMMEDAIEPVRLVDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLS
                     SHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            4674..7922
                     /gene="cas9"
                     /locus_tag="WGN93_000980"
     CDS             4674..7922
                     /gene="cas9"
                     /locus_tag="WGN93_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEZ0226898.1"
                     /translation="MAAFKPNPINYILGLDIGIASVGWAMVEIDEDENPICLIDLGVR
                     VFERAEVPKTGDSLAMARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGL
                     IKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVADNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELILLFEK
                     QKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAER
                     FIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSPELQDEIGTAFSLFKTD
                     EDITGRLKDRIQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLGRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEDGFKERNLNDTRYVNRFLCQFVA
                     DRMRLTGKGKKRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEG
                     VSVLRVPLTQLKLKDLEKMVNREREPKLYEALKARLEAHKDDPAKAFAEPFYKYDKAG
                     NRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKGDKYYLVPIYSWQVAKG
                     ILPDRAVVQGKDEEDWQLIDDSFNFKFSLHPNDLVEVITKKARMFGYFASCHRGTGNI
                     NIRIHDLDHKIGKNGILEGIGVKTALSFQKYQIDELGKEIRPCRLKKRPPVR"
     gene            7989..8903
                     /gene="cas1"
                     /locus_tag="WGN93_000981"
     CDS             7989..8903
                     /gene="cas1"
                     /locus_tag="WGN93_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEZ0226899.1"
                     /translation="MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAKHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QLWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLTVIHLYEQGRLKTELTLGIKQHLIKILYYQTSIERQHFSTLAAIDKMIS
                     SFQAGVTDKNAKQLKLPEILPLKEYQYE"
     gene            8896..9222
                     /gene="cas2"
                     /locus_tag="WGN93_000982"
     CDS             8896..9222
                     /gene="cas2"
                     /locus_tag="WGN93_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEZ0226900.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     repeat_region   9286..10971
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=9286..9321
                     /rpt_unit_seq="attgtagcactgcgaaatgagaaagggagctacaac"
     gene            11411..11702
                     /locus_tag="WGN93_000983"
                     /pseudo
     CDS             11411..11702
                     /locus_tag="WGN93_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         3335 a         3072 c         2807 g         2488 t
ORIGIN      
        1 aagccgaacc gttttcagac ggcatcgtcc gaccaacccg cttctttcaa tttccgccgt
       61 tgcgcgtcgt agcgggcctt atccgcccaa taaatcgtct gaatacacgc ctcgccgcag
      121 tcgctgccgc agcattccca cgactcgggt cggacgggtt cgtctaaaag cggctcgccc
      181 aaaagggctt cggctttatg cttcagggtc atatccatcg gcgatttcca agcgcgcacc
      241 gtcaaactcg atgacttcgc cgccgcgtat tttggcggtt ttacgggttt cggtttcgcc
      301 gttgcgcgac accaaccctt cggcaatcaa cgccttcgcc tgtccgccgc tttcggcaag
      361 tccggccaat ttcaagaggt cgcacagggc gatgtattcg ttgtcttcga gatagacggt
      421 ggcttccata atgttccctt gcagaaagag gccgttattg tagcacctgc cgccgccgta
      481 cccaaaatta ccgcaaaaca ggcagcacat cccgccccgc ctgttccgta aaaatgccgt
      541 ctgaaacccc atatgccgtc atccgatcaa agaaatcctg tccaacggca gactgcaaat
      601 cctgttcccc gacgaatccg cattgacgct gatgcacatc ctcaaacgcg aactgcccga
      661 tacaccggca atcggcatca aaacgaaatc aaaaacctgt ttgaacgtaa aattaattta
      721 actgcttgcc atccgtccga ataaggtata tagttcctta taactagttt gatagtcctt
      781 tatatctatc aatactcctt gggaagcctc cgccatacgg caggaggcat ttttttgccg
      841 ccgcaaaagc tcaaaaacat ttgcaggtca tgccgtctga atccgaaaca gcattaccta
      901 caccgccatc taaagacaac cctgctacaa tacgcctttt attgtccacg ccgattttgc
      961 catgaccgag ccgacctaca tccccctgcg cctgcatacc gagttttcga ttaccgacgg
     1021 tatggtgcgg attaaaaaac tgattgccaa agcgcaggaa tacggtttgc ctgctttggg
     1081 catcagcgat ttgatgaacg aattcggctt ggtgaaattc tataaagcct gccgcagcgc
     1141 aggaattaag cccatcggcg cggcggacgt gtggataggc aatccgaatg cgcccgacaa
     1201 gccgttccgt gccatgctga ttatccgcaa cgatgcgggc tatctgcgtt tgagcgagct
     1261 tttgacagag gcctatgtcg gcaaagaccg caatatccat catgcggaac tcaaccccga
     1321 atggctggaa aacggcgaca acagcggctt gatttgtttg agcggcgcgc attacggcga
     1381 agtgggcgtg aatctcttga acggcaatga agacgcggcg cgtgcggcgg cgttgaaata
     1441 tgcggcatgg tttcccgatg cgttttattt agagctgcaa cgcctgcccg aacgccccga
     1501 atgggaggct tgcgtttccg gcagcgtgaa gctggcagag gaactgagtt tgccggtggt
     1561 ggcgacccac ccgacgcagt ttatgagcag cgatgatttc aacgcgcacg aggcacgggt
     1621 gtgtattgcg ggcggctggg tgctgacgga caaaaaacgt ccgcgcgatt tcacaccggg
     1681 ccagtttttc attccgccgg aaacgatgct ggagcgtttc gccgatttgc ccgaggcctt
     1741 ggaaaacacg gtagaaattg ccaaacgctg caatctgcac atcacattgg gcaaaaactt
     1801 cctgcccctt ttccccacgc ccgacggttt atcgcgcgat gactatctca tcaaactctc
     1861 aaacaagggt ttgcaggaac gcatggttca gctttatccc gacgaggcgg agcgtgcggc
     1921 aaaaatgccg gaatatcagg aacgtttgga ttttgagctg aacatcatca tccagatgaa
     1981 attccccggc tatttcctta tcgtacaaga ctttatcaac tgggcgaaaa cgcacggctg
     2041 tccggtcggg ccgggacgcg gttcgggcgc gggttcgctg gtggcgtatt cgctgaaaat
     2101 taccgacctc gacccgctga aatacgcgct gctgtttgaa cgtttcttaa accccgaacg
     2161 cgtctccatg cccgactttg acgtggactt ttgccaatcc aaccgggggc gcgtgattga
     2221 gtatgtgcgc gaaaaatacg gcgcgaaggc agtcagccaa attgtcacct tcggcacgat
     2281 gtcgtccaaa gcagtgattc gcgacgtggg gcgcgtactg gaactgccgt ttatgctgtg
     2341 cgacaaactg tccaagctga ttccgttgga agccaacaaa cctctgggtt tggacgacgc
     2401 gatgaaggcg gagccgcaga ttcaggaatt aatcgaagcg gaagaagcgg acgaactgat
     2461 tacgctggcg aaaaagctgg aagacctgac gcgcggtttg ggtatgcacg caggcggcgt
     2521 gttgattgcg ccgggcaaga tttccgatta cagccccgtg tatcaggcgg atgaatccgc
     2581 ctctcccgta tccatgtacg acaagggcga cgtggaagac gtgggtttgg tgaaattcga
     2641 ctttttaggt ctgcgtaacc tgaccattat cgaaatggcg cagaacaaca tcaaaaacac
     2701 caccggcgac atcatcgatg tcggcaaaat tccgctcgac gaccaggccg cctaccaaat
     2761 cttccgcgat gcgaacacca ccgccgtgtt ccagttcgag tcgaccggca tgaaaaaaat
     2821 gctgaaaacg gcgcatacca ccaagtttga agaactgatt gccttcgtat cgctctaccg
     2881 cccaggcccg atggacaaca tccccgactt cgtcgcgcgt atgaaggggc aagaattcca
     2941 atacatccat ccgctgctcg agggcatcct cgcgccgacc tacggcatta tggtgtatca
     3001 ggaacaagtg atgcaggcgg cacagattat cggcggctac tcgctcggcg gcgcggacct
     3061 gctgcgccgc gcgatgggca agaaaaagcc cgaagaaatg gtgaaacacc gcgaaatctt
     3121 cgccgaaggc gcggcaaaac aaggcatttc gcgcgaaaaa tccgacgaaa tcttcaacta
     3181 catggaaaaa ttcgccggct acggtttcaa caaatcccac gctgccgcct acgccctgat
     3241 ttcctaccag accgcatggc ttaaagccca ctatcccgcc gaatttatgg cggcgaccat
     3301 gtcgtccgaa ttggacaaca ccgaccagct caagcatttc tacgacgact gccgcgccaa
     3361 cggcatcgag tttctgccgc ctgacatcaa tgaatccgac taccgcttca cgccgtatcc
     3421 ggacatgaaa atccgctacg cgctcggcgc gattaaaggt acgggcgaag ccgccgtcga
     3481 atccatcacc tccgcgcggc aaagcggcgg caagtttacc ggcctcttgg acttctgcga
     3541 gcgcgtcggc aaagaacaca tgaaccgccg cacccttgaa gccctgatac gcggtggcgc
     3601 gttcgacagc atcgaaccca accgcgccat gctcttggcg aacatcgacc tcgccatgaa
     3661 caacgccgac caaaaagccg ccaacaccaa tcagggcgga cttttcgaca tgatggaaga
     3721 cgccatcgaa ccggtgcggc tcgtcgacgc gccgatgtgg agcgaatcgg aaaaactcgc
     3781 cgaagaaaaa accgtcatcg gcttttacct gtccggccac ccgttcggcc cgtatgccca
     3841 agaagtccgc caaatcgccc cgcagaaact gtcgaaactc aaaccgcaag acagcgtgcg
     3901 cctcgccgga ttcgttaccg ccgtgcgtac gatgatgggc aagcgcggca aaatcgcctt
     3961 cgtcagcctt gaagatttga gcgggcaggt tgaaatcatg gtcggcggtc agacgctgga
     4021 aaactgcgcc gactgcctca aagccgacca agtgctgatt atcgaatcca aagtcagccg
     4081 cgacgactac ggcggcggcg acggactgcg catcatggca aaccaagtca tgaccctgca
     4141 aacggcacgc gaacgctacg cccgcagcct cagcctcgcc ctcgccccgc atcacgacat
     4201 cggcggactg gtacggctgc tctcctccca ccaactgccc gacacgccgc gcatcccgct
     4261 gcaactgtcg tatgccaacg aaaaagcgtc gggcaggctt caagtgccgc cgaaatggac
     4321 ggttacaccg agctccgcat tgttcggcga actggaaaca ttgctcggca gccggtcggt
     4381 gcgcgtcaac tggtaaccca aaatataaat gccgtctgaa gcccaaaatc ggtttcagac
     4441 ggcatttttt aaccgaaata aacgatgccc cttaaagcag aagctttaag gggcagagcg
     4501 ttgcggcaca tcttttcaga cggccttatt gtagcaacgg ttctcatttc gcagtgcgac
     4561 aatatgtttg ggattctagc cgttgtgaga tgataagtca ataatctatt tgtatataaa
     4621 taagacaata agatatatta tcattatttg caacgttgtt tacggagtaa taaatggctg
     4681 ccttcaaacc taatccaatc aactacatcc tcggcctcga tatcggcatc gcatccgtcg
     4741 gctgggcgat ggtagaaatt gacgaagatg aaaacccaat ctgcctgatt gatttgggcg
     4801 tgcgcgtatt tgagcgtgcc gaagtaccga aaacaggcga ctcccttgcc atggcaaggc
     4861 gtttggcgcg cagtgtccgc cgcctgaccc gccgtcgcgc ccatcgcctg cttcgggccc
     4921 gccgcctatt gaaacgcgaa ggcgtattac aagccgctga ttttgacgaa aacggcttga
     4981 tcaaatcctt accgaataca ccatggcaac ttcgcgcagc cgcattagac cgcaaactga
     5041 cgcctttaga gtggtcggca gtcttgttgc atttaatcaa acaccgcggt tatttgtcgc
     5101 aaagaaaaaa cgagggcgaa actgccgata aagagcttgg cgctttgctc aaaggcgtag
     5161 ccgacaatgc ccatgcctta cagacaggcg atttccgcac accggccgaa ttggctttaa
     5221 ataaatttga gaaagaaagc ggccatatcc gcaatcagcg cggcgattat tcgcatacgt
     5281 tcagccgcaa agatttacag gcggagctga ttttactgtt tgaaaaacaa aaagaatttg
     5341 gcaatccgca tgtttcaggc ggccttaaag aaggtattga aaccctactg atgacgcaac
     5401 gccctgccct gtccggcgat gccgttcaaa aaatgttggg gcattgcacc ttcgaaccgg
     5461 cagagccgaa agccgctaaa aacacctaca cagccgaacg tttcatctgg ctgaccaagc
     5521 tgaacaacct gcgtatttta gagcaaggca gcgagcggcc attgaccgat accgaacgcg
     5581 ccacgcttat ggacgagcca tacagaaaat ccaaactgac ttacgcacaa gcccgtaagc
     5641 tgctgggttt agaagatacc gcctttttca aaggcttgcg ctatggtaaa gacaatgccg
     5701 aagcctcaac attgatggaa atgaaggcct accatgccat cagccgtgca ctggaaaaag
     5761 aaggattgaa agacaaaaaa tccccattaa acctttctcc cgaattacaa gacgaaatcg
     5821 gcacggcatt ctccctgttc aaaaccgatg aagacattac aggccgtctg aaagaccgta
     5881 tacagcccga aatcttagaa gcgctgttga aacacatcag cttcgataag ttcgtccaaa
     5941 tttccttgaa agcattgcgc cgaattgtgc ctctaatgga acaaggcaaa cgttacgatg
     6001 aagcctgcgc cgaaatctac ggagaccatt acggcaagaa gaatacggaa gaaaagattt
     6061 atctgccgcc gattcccgcc gacgaaatcc gcaaccccgt cgtcttgcgc gccttatctc
     6121 aagcacgtaa ggtcattaac ggcgtggtac gccgttacgg ctccccagct cgtatccata
     6181 ttgaaactgc aagggaagta ggtaaatcgt ttaaagaccg caaagaaatt gagaaacgcc
     6241 aagaagaaaa ccgcaaagac agggaaaaag ccgccgccaa attccgagag tatttcccca
     6301 attttgtcgg agaacccaaa tccaaagata ttctgaaact gcgcctgtac gagcaacaac
     6361 acggcaaatg cctgtattcg ggcaaagaaa tcaacttagg ccgtctgaac gaaaaaggct
     6421 atgtcgaaat cgaccatgcc ctgccgttct cgcgcacatg ggacgacagt ttcaacaata
     6481 aagtactggt attgggcagc gaaaaccaaa acaaaggcaa tcaaacccct tacgaatact
     6541 tcaacggcaa agacaacagc cgcgaatggc aggaatttaa agcgcgtgtc gaaaccagcc
     6601 gtttcccgcg cagtaaaaaa caacggattc tgctgcaaaa attcgatgaa gacggcttta
     6661 aagaacgcaa tctgaacgac acgcgctacg tcaaccgttt cctgtgtcaa tttgttgccg
     6721 accgtatgcg gctgacaggt aaaggcaaga aacgtgtctt tgcatccaac ggacaaatta
     6781 ccaatctgtt gcgcggcttt tggggattgc gcaaagtgcg tgcggaaaac gaccgccatc
     6841 acgccttgga cgccgtcgtc gttgcctgct cgaccgttgc catgcagcag aaaattaccc
     6901 gttttgtacg ctataaagag atgaacgcgt ttgacggtaa aaccatagac aaagaaacag
     6961 gagaagtgct gcatcaaaaa acacacttcc cacaaccttg ggaatttttc gcacaagaag
     7021 tcatgattcg cgtcttcggc aaaccggacg gcaaacccga attcgaagaa gccgataccc
     7081 cagaaaaact gcgcacgttg cttgccgaaa aattatcatc tcgccccgaa gccgtacacg
     7141 aatacgttac gccactgttt gtttcacgcg cgcccaatcg gaagatgagc gggcaagggc
     7201 atatggagac cgtcaaatcc gccaaacgac tggacgaagg cgtcagcgtg ttgcgcgtac
     7261 cgttaacaca gttaaaactg aaagacttgg aaaaaatggt caatcgggag cgcgaaccta
     7321 agctatacga agcactgaaa gcacggctgg aagcacataa agacgatcct gccaaagcct
     7381 ttgccgagcc gttttacaaa tacgataaag caggcaaccg cacccaacag gtaaaagccg
     7441 tacgcgtaga gcaagtacag aaaaccggcg tatgggtgcg caaccataac ggtattgccg
     7501 acaacgcaac catggtgcgc gtagatgtgt ttgagaaagg cgacaagtat tatctggtac
     7561 cgatttacag ttggcaggta gcgaaaggga ttttgccgga tagggctgtt gtacaaggaa
     7621 aagatgaaga agattggcaa cttattgatg atagtttcaa ctttaaattc tcattacacc
     7681 ctaatgattt agtcgaggtt ataacaaaaa aagctagaat gtttggttac tttgccagct
     7741 gccatcgagg cacaggtaat atcaatatac gcattcatga tcttgatcat aaaattggca
     7801 aaaatggaat actggaaggt atcggcgtca aaaccgccct ttcattccaa aaataccaaa
     7861 ttgacgaact gggcaaagaa atcagaccat gccgtctgaa aaaacgcccg cctgtccgtt
     7921 aaattaatct atccctgttt caggcggcct gaagcaggga ttttttatat aaaaataagg
     7981 ggaaaaacat gacttggcgc agcctgctta ttcaaaacgg cggcaaacta tccttgcaac
     8041 gccggcaact gctgattcaa caaaacggcg agtcccacac cgtaccatta gaggacatcg
     8101 ccgttatcat catcgaaaat cgcgaaaccc tgattaccgc cccgctccta tcagccttag
     8161 ccaagcatgg tgcaaccctg ctgacctgcg acgagcagtt cctgccctgc ggacaatggc
     8221 tgccttatgc ccaatatcac cgccaactta aaatcctcaa actgcaactg aacataagcg
     8281 aacccttaaa aaagcaactc tggcaacata tcgtccgcca aaaaatcctg aaccaagcat
     8341 ttgtcgcaga cgaaacaggc aatgatcttg cagccaaacg gctgcgcact ttggcatctg
     8401 aagtccgttc aggcgataca ggaaaccgtg aagcccaagc tgccgccctc tactttcaag
     8461 ccctctttgg cgaaaaattt acccgtaatg acaacaacgc cgtcaatgcc gcattgaact
     8521 acacctacgc cgtactccgt gccgcagttg cacgcgccct gaccttatac ggttggttac
     8581 ctgcattagg cttgtttcat agaagtgaac tcaatccatt taatctcgcc gatgacttta
     8641 tcgaaccctt acgcccattg gccgacctga ccgtgataca tttgtacgaa caaggccgtc
     8701 tgaaaactga actgacgctc ggcatcaaac aacacctcat caaaatcctc tactatcaaa
     8761 ccagcatcga acggcaacat ttcagcacct tggctgccat cgacaaaatg atttcgtcat
     8821 ttcaagccgg cgtaaccgat aaaaacgcca aacaactgaa actgcctgaa atcctaccat
     8881 tgaaagaata ccaatatgag tgaggccaaa tttatgagga ttatcgtctt cttcgaccta
     8941 ccggttatca cggcggcaaa gcgcaaagcc gccaatcaat tccgccagtt tttattaaaa
     9001 gacggatacc aaatgctgca actttccgta tacagccgta tcgtcaaagg ccgcgattcg
     9061 ttgcaaaaac accacaacag actgtgtgca aaccttccgc aagaaggctc aatccgctgt
     9121 ttggagataa cagaaaagca atatgccgcc atgaaactgc tgttgggcga gctgaaaacc
     9181 caagaaaaaa aggtcaattc agaccaatta ttgttatttt aagcccattt tttcataaca
     9241 aataaaacgg gaaaccctta tgaaataagg atttcccgtc gaagtattgt agcactgcga
     9301 aatgagaaag ggagctacaa cactatcgag ggtacattcc ctatcagtgt tattgtagca
     9361 ctgcgaaatg agaaagggag ctacaacgcc ccgaatgtga ttttacgctt tggaaaaatt
     9421 gtagcactgc gaaatgagaa agggagctac aacctttttg catcttcaat aacctcattt
     9481 acaattgtag cactgcgaaa tgagaaaggg agctacaacg gccggaaagg gtgggcgata
     9541 aatggattta ttgtagcact gcgaaatgag aaagggagct acaaccacct ttaaatttgc
     9601 ctgacacttt gacctattgt agcactgcga aatgagaaag ggagctacaa cccatgaaaa
     9661 cctcatgcat cgatctatga aattgtagca ctgcgaaatg agaaagggag ctacaacgga
     9721 ggcgaccagc gtaccaagta cgcaggcatt gtagcactgc gaaatgagaa agggagctac
     9781 aacattcggg tcgcaacaga aacctttacc aaaattgtag cactgcgaaa tgagaaaggg
     9841 agctacaaca caaaggctta taacttcttc aatgaagaga ttgtagcact gcgaaatgag
     9901 aaagggagct acaacaaatc atcaagtgct ttcatagaca atcgaattgt agcactgcga
     9961 aatgagaaag ggagctacaa ccctgtcagg agatgggcaa accttcagac gattgtagca
    10021 ctgcgaaatg agaaagggag ctacaaccat tttttacggc attttatata catcattatt
    10081 gtagcactgc gaaatgagaa agggagctac aacgtaaagt tagtgcggtt gtatcttcat
    10141 cagattgtag cactgcgaaa tgagaaaggg agctacaacc acatttgatt ggaacggcgg
    10201 agattgtgta ttgtagcact gcgaaatgag aaagggagct acaaccaacg atttggcgga
    10261 tgtatttgag gctgaattgt agcactgcga aatgagaaag ggagctacaa cgatgggaac
    10321 ttagttctta aatctttctc aattgtagca ctgcgaaatg agaaagggag ctacaactgg
    10381 gcgtaatgcc tgttgtcgct ggtagcaatt gtagcactgc gaaatgagaa agggagctac
    10441 aactcgtgca ggattcggtt ttccacctcc caaattgtag cactgcgaaa tgagaaaggg
    10501 agctacaacc agtatatcga gttgcggaat atcagggtga ttgtagcact gcgaaatgag
    10561 aaagggagct acaactcggt caggtcatag acggctttgt tgtcgattgt agcactgcga
    10621 aatgagaaag ggagctacaa ctcaaacctt cgttgtaaag tcggtctgat tattgtagca
    10681 ctgcgaaatg agaaagggag ctacaacagc agaagcagac caaaaaagaa acgcttaatt
    10741 gtagcactgc gaaatgagaa agggagctac aaccgaactg caagaactcc attcacgacc
    10801 cctattgtag cactgcgaaa tgagaaaggg agctacaaca aaccagccga tgccgccttt
    10861 aaaagtgata ttgtagcact gcgaaatgag aatgggagct acaacactca aattcagtct
    10921 gtcaacccgt tccgcattgt agcactgcga aatgagaatg ggcgctacaa ccagccgttg
    10981 cgataagcga acgtgcgtta aagtcattga gacacagtgc aattatggca agaaaggcga
    11041 cagatattgt gtcacagatt tgaaataaga aaaaaccgcc cactcacaga gtaggcggaa
    11101 aacttgcgtt tttttgattg tggtcgggtt agctactgca ttgacttaac agcaaagcaa
    11161 ccgctaaaat gaacttgtgg ttcacttcaa cggacagcag caactttttc ccacgcataa
    11221 ggaatttaag cattttagct tctcctagtg aagttaatca cacaggcgag agccgaacaa
    11281 aaatccccgt tgcagcgggg atttttgctg ttccctgttt gatgattaaa ctaaaatctt
    11341 gcaaaatgag acctttgcaa aattccccaa aatcccctaa attcccacca agacatttag
    11401 gggatttctc atgagcacct tctttcaaca aaccgcccaa gccatgattg ccaaacacat
    11461 cgaccgtttc ccgctattga agttggacca ggtgattgat tgacagccga tcgagcagta
    11521 cctgaaccgt caaaaaaacc gttaccttag agaccaccgc ggccgtcccg cctatcccct
    11581 gttgtccatg ttcaaagccg tcctgctcgg acaatggcac agcctctccg atcccgaact
    11641 cgaacacagc ctcattaccc gcatcgattt caacctgttt tgccgtttcg acgaactgag
    11701 ca
//
LOCUS       DAWEYF010000052        11696 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.052, whole genome shotgun sequence.
ACCESSION   DAWEYF010000052 DAWEYF010000000
VERSION     DAWEYF010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11696
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.052"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(308..730)
                     /locus_tag="WGN93_000984"
     CDS             complement(308..730)
                     /locus_tag="WGN93_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ0226901.1"
                     /translation="MQVTSKWIDGMCFVGTTESGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(848..1519)
                     /locus_tag="WGN93_000985"
     CDS             complement(848..1519)
                     /locus_tag="WGN93_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ0226902.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1535..2161)
                     /locus_tag="WGN93_000986"
     CDS             complement(1535..2161)
                     /locus_tag="WGN93_000986"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ0226903.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AGQGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGVVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2268..3074)
                     /locus_tag="WGN93_000987"
     CDS             complement(2268..3074)
                     /locus_tag="WGN93_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ0226904.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAASEPAAASAAQGDTSSIG
                     STMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMM
                     KFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQP
                     TKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYI
                     PSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3333..3773)
                     /locus_tag="WGN93_000988"
     CDS             complement(3333..3773)
                     /locus_tag="WGN93_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ0226905.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3836..5242)
                     /locus_tag="WGN93_000989"
     CDS             complement(3836..5242)
                     /locus_tag="WGN93_000989"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ0226906.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5412..6527
                     /gene="lptF"
                     /locus_tag="WGN93_000990"
     CDS             5412..6527
                     /gene="lptF"
                     /locus_tag="WGN93_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ0226907.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6524..7594
                     /gene="lptG"
                     /locus_tag="WGN93_000991"
     CDS             6524..7594
                     /gene="lptG"
                     /locus_tag="WGN93_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ0226908.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7904..10489
                     /gene="acnB"
                     /locus_tag="WGN93_000992"
     CDS             7904..10489
                     /gene="acnB"
                     /locus_tag="WGN93_000992"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ0226909.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10631..11626
                     /locus_tag="WGN93_000993"
     CDS             10631..11626
                     /locus_tag="WGN93_000993"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ0226910.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         2685 a         3258 c         3041 g         2712 t
ORIGIN      
        1 aataaattaa tatatggctt aaaataacgg gatgcccgcc ttccgcccgc ccgcagaagc
       61 aggcgggtat cattttaaaa cgcggcattt aaaatttgac cgaaaattgt tgacaatccg
      121 gaatcaagtc tgcacaatac cccgacaagt ccaagtatta taaaggctga ataaagagga
      181 aacagcaggc agatatattc gggaggtgca gtccgaatat atctgctttt ttatgcgcct
      241 ccggattgcc tgccgcacct ttcccttcag acggcatcag ccgtttcccc ataatgccgc
      301 ccgatgccta tttatctgcc ccggcaattt caaaactgtg ggtaatcttt gccgctttgc
      361 ccaacataat cgaagccgaa cagtattttt cggcagacat ctgaacggcg cgctcaatgg
      421 ccgattcttt caaatcatgc ccgaatactt tgaaatggat gtggatttcg gtaaacacgc
      481 gcggcgcatc gtccgcccgt ttcgccgtaa ccgtcgcacg gcagtcagtc actttctgac
      541 gctgtttttc ggcaatcatc accacatcga tgctcgaaca gcccgccacg cccaacagca
      601 gcatttccaa agggctgggc ccgcgcttgg ccgcaccttc tgccgccgaa ccctccataa
      661 cgacgctgtg cccgctttcc gtcgtgccga caaagcacat tccgtctatc cattttgatg
      721 taacctgcat ggtgtcattc ctgaaaatag cgttaaaacc gctttgcata tggcgttatt
      781 gtaaacaatt tcaagcggct tatgcagaaa tatggacaaa acggcgaaaa aacgcctgaa
      841 aaccgattta cggtttggcg gactggccat tgatctgcac cgatttgagt ttcagcgtat
      901 aggttttgcc gtcgtcggta tagccgattt gtgccggaat attgttcagg gacggtgcga
      961 agaaatacat taccgtatcg tcgccgcgcc gcacccgata tttgacgact tcggtttcca
     1021 cgccgcctat gctgtatttt cctgtacccg ccttattcaa accgccgacg gaataaagtt
     1081 ttttgccgtt ggtgattttc agccccgggg ggagtttcgc gtcatttgcc gccaactgcc
     1141 aggcaagcgt gaacaaatcc atagccttgg ggctttgctc ggttttgctc tcgcccgctt
     1201 tgccgtaggt tacgctgccg tcggcgaatt tggcttccgc atacagtttg cccctgcgta
     1261 tgtctctata gtaggtaggg tgcagggtat tgccgacaac cgtaccgccg gactcgaaac
     1321 ggatattgta tagcggcact ttaatcgtcg aaacgatttt gtaagcattg ccgctgcgtt
     1381 caaatgtcat cgtggcggga atgccgtagc tgccggaata gtgcagcacg gcggattggg
     1441 gcagccctgc cgcatacgcg cacggcaggg cggcggacaa aatggcggcg gaaaatatat
     1501 ttttaaaagt cttcatcatt tgctcccgcc cggtttacgc cgtcagaaaa cgggcggcat
     1561 cggcgttttc cgaatttctg acgcggtttc cctcgataat caggcggccg gcggcaaaat
     1621 cggcaacggc tttcggatag agtttatgct cgacagccaa aacccgggcg gcaacatcgt
     1681 ctgccgtatc gccgtcgagt atcggcacaa ccccttgcga tacaatcggg ccgcaatcca
     1741 gttcggcagt aacgaaatgg atggtgcagc cggcaacgcg acaacctgcc tccaaagcgc
     1801 gttcgtgcgt atgaagtccg gtaaacgagg gaaggatgga cgggtgaatg ttcatcagcc
     1861 tgccttcgta atgggcacag aactcagggg tcagaatccg cataaaacct gccaaaacca
     1921 ccaagtcggg ttgatatgcg tcgatttttt ccatcatggc ggtatcgaag gcaagtcgtg
     1981 attcaaagtt tttatgattc aggctgtcgg tcggaatacc ctgaccggcc gcccattgca
     2041 aaccggcagc cgtttcgctg ttgctcaaca cggcggcaat acggacgttg ggaatggcgg
     2101 cattgacgat tgcctgcata ttgctgccgc gtccggaaat caggatgacg atgtttttca
     2161 taatggtgcg cttttgaaag ggatgccatc tgaaccgctg tttggtggtt tcagacggca
     2221 tttgccgtaa aaatgcccga aaacctgttt cgggcatgga ttcggactta atttactttt
     2281 ttgatgtcga cttgagccgg ctgcttggcg ggcgcgtttt cgggtgcgcc gattttgacc
     2341 agtttcacat caaataccaa agtggcgttc gggccgattt tgtcgcccgc accctgttcg
     2401 cggtaggcaa ggttggacgg gatgtagaac gtggcttcgc cgccttcttt cagaagctgt
     2461 acgccttcgg tccaacccgg aatcacttgg ctcaaaggga aggtgaccgg gccgccgttg
     2521 gctttgctgc tgtcgaatac cgtaccgtca atcaggcggc cttcgtattc cacggtaacg
     2581 atgtcgtctt tggtcggctg tttgccttcg ccctgtttgg tgattttgta ttgcaggccg
     2641 gaagcagtgg tcttcacgcc gtctttggcg gcattttctt tcagaaaggc ttcgcctttt
     2701 tctttattgg ccttcgcgtc cgccttgtgt ttttctacgg ctttagcctg ttgttcctga
     2761 aggaatttca tcatgacttc ctgagcctgc tcttcagtca ttttgatttc tttgccgtca
     2821 tacactgcct gcatggcttc ggtaaagact ttcaaatcga tttccgcacc ctgttccttc
     2881 atttgcttca gggagcgtcc gatgtccacg cccatcgcat agcttgcctg ctgcatcgtg
     2941 ctgccgatcg aagaggtgtc gccctgcgcg gcagaagcgg cggcaggttc ggatgcggct
     3001 tcttttttgc cacaggcgga aagtgccaaa gcggcggaaa gggtcagtgc gctgattttg
     3061 aaaatggtgt tcatgatgga tcttcgctgt cgataaggtc ggaaaaacgg gattatagcc
     3121 gagtttgaat gtttcaacac acaggatgac acataaagcg tcaatcgtgt gttgccctgt
     3181 tttggaaggg attgaacctt ccaaaataag ttttgattct accgccccga gggacagatg
     3241 tccaagtggc ggggttcaac cgataaggaa attttaatca aatagaatca agcctgttta
     3301 aattttgtaa atgcggcatt tcagacggca ttttatgcct tgccctccat gccgtgatgt
     3361 tcgatggcaa aaccgcttcg gcggtaggcg gtaaagcgtt cgcgcgcgtc ggcgagatct
     3421 tccaagctgt tgccgacgat ttccaaaacg cgcgcgggca agaccggagc ggtgttccaa
     3481 aaaccgtcgg acaggttcaa aacagtcatg ccttcgggaa ttcggggcgg attgccgccg
     3541 caagcaagca ggacggatgt ttcagacggc atggcttctt ccatttccca aatttcgtgc
     3601 ggaatgaaac tctcggcttc gtattgccaa agcattttgt ccaattcctg aagccgcccg
     3661 aacgaatcgg accacaccag tatcctgccg ccgtcccgaa tcgcacgggc aatcaggcgg
     3721 caggtgaaaa tcggaacttg ggcaacgtgc gtgtaaaagg tggctttcgg catattgttt
     3781 gagcatttgg caggacgatg ccgtctgaaa ggcttcagac ggcattgtgg caaaattaaa
     3841 gattccgcag atagttcagc agcaagggaa cgggacggcc agtcgcacct ttttccgctc
     3901 cggatttcca cgccgtaccc gcgatgtcaa ggtgcgccca cgggtagcct tcggtgaagt
     3961 aagacaggaa tgttgcggcg gtaatcgtgc ccgcgccggg cgtgccgatg tttggaatgt
     4021 cggcaaagtt ggatttgagt tggtctttgt aggtctcaaa gagcggcagt tgccatgctt
     4081 tgtcgtccac gttgtaggaa gcggcaagca ggctgtcgat caaatcctga ttgttgccca
     4141 tcacgccgct gacatcgtgc cccaaggcaa caatacacgc gccggtcagg gtggcgacgt
     4201 cgatgacggc tttgggtttg aactgctcgg cgtaagtgag cgcgtcgcac aaaatcagac
     4261 ggccttcggc atcggtgttc aacacttcga tggtcagacc tttcatactt ttcacgacat
     4321 cgcccggttt gtttgccgcg ccggaaggca tattttcaca agtggcgacg acggcaatca
     4381 ggttaatcgg cagttgcagt ttgacggcgg cgcagaaggt gctgatgacg gttgccgcgc
     4441 cgcacatatc aaacttcatt tcgtccatgt tcaggccggg cttgagggag atgccgccgg
     4501 tgtcgaaggt aatgcctttg ccgaccaata ccacaggcgc ggcttctttg tcggctgcac
     4561 cgaaatagct cagttcgacc aaataggggg cttccgcgct gcctttggcg accgaccaaa
     4621 acgaacccat gttttctttg atgtagtctt tttcgatgat tttggcgtgc gcgcccagtt
     4681 tttcggcttc ggctttggcg gtgcgcgcta aaaattcggg cgtgcattcg ttgggcgcgg
     4741 cgttgcccaa gtcgcggcag aggctttgtc cgtaaacttg cgcttcggcg acgcgcaagg
     4801 cttctttaac gacggcttcg tgtgcgctgt ggaacacggc ggtttcaaat ttggcgggct
     4861 tggcttcttt tttgtagcgg tcgaaacggt aggcggcgtt gccgaacgca atcgcaaacg
     4921 cttcggctac ggcggcggct tgcgcttcat cgaaggcatg gatgtccaca ttgaccgttt
     4981 cctgattttg cgcccatttg gcggcttcgg cggcggcctt gttcaatgcg gcgcggccgg
     5041 tgcttttcag acagcatacg gcaacagcct gcaaaccgtt gcctgtcggg atttttgtgt
     5101 cggcaaaatt ttgaccttct tcaagcgaag acaaaagggc aagggcggtc ggatggttta
     5161 attgcgcctc ttcggtgcag acaaataact gtgcgcctgc ctgctgttcc tgcaagattt
     5221 cggtttttgt gctaaattcc acgtttattc tcctgattga gacggttgtc ggtagttttc
     5281 ggacggcctt tcgctcaaaa gaccgtctga agacggctgg cacgattgta ccccatttga
     5341 agcaccgtct gaaaccttgc gcggacaatc cgcctgcgcc gaaccgctta ccgccccctg
     5401 accgcgattc tatgatttat caaagaaacc tcatcaaaga actctctttt accgccgtcg
     5461 gcattttcgt cgtcctcttg gcggtattgg tctccacgca ggcaatcaac ctgctcggcc
     5521 gtgccgccga cgggcgtgtc gccatcgatg ccgtgttggc attggtcggc ttctgggtca
     5581 tcggtatgac gccgcttttg ctggtgttga ccgcatttat cagtacgttg accgtgttga
     5641 cccgctactg gcgcgacagc gaaatgtcgg tctggctatc ctgcggattg gcattgaaac
     5701 aatggatacg cccggtgatg cagtttgccg tgccgtttgc cgttttggtt gccgtcatgc
     5761 agctttgggt gataccgtgg gcagagctac gcagccgcga atacgctgaa atcctgaagc
     5821 agaagcagga attgtctttg gtggaggcag gcgggttcaa cagtttgggc aagcgcaacg
     5881 gcagggttta ttttgtcgaa accttcgata ccgaatccgg catcatgaaa aacctgttcc
     5941 tgcgcgaaca ggacaaaaac ggcggcgaca acatcatctt cgccaaagaa ggtaacttct
     6001 cgctgaacga caacaaacgc acgctcgaat tgcgccacgg ctaccgttac agcggcacgc
     6061 ccggacgcgc cgactacaat caggtttcct tccaaaaact caacctgatt atcagcacca
     6121 cgccaaaact catcgacccc gtttcccacc gccgtaccat tccgaccgcc caactgattg
     6181 gcagcagcaa cccgcaacat caggcggaat tgatgtggcg catctcgctg accgtcagcg
     6241 tcctcctact ctgcctgctt gccgtgccgc tttcctattt caacccgcgc agcggacata
     6301 cctacaatat cttgattgcc atcggtttgt ttttaattta ccaaaacggg ctgaccctgc
     6361 tttttgaagc cgtggaagac ggcaaaatcc atttttggct cggactgctg cctatgcaca
     6421 tcatcatgtt cgtcatcgca atcgtacttc tgcgcgtccg cagcatgccc agccagccct
     6481 tctggcaggc ggttggcaaa agtctgacat tgaaaggcgg aaaatgaacc tgatttcacg
     6541 ttacatcatc cgtcaaatgg cggttatggc ggtttacgcg ctccttgcct tcctcgcttt
     6601 gtacagcttt tttgaaatcc tgtacgaaac cggcaacctc ggcaaaggca gttacggcat
     6661 atgggaaatg ctgggctaca ccgccctcaa aatgcccgcc cgcgcctacg aactgatgcc
     6721 cctcgccgtc cttatcggcg gactggtctc tctcagccag cttgccgccg gcagcgaact
     6781 gaccgtcatc aaagccagcg gcatgagcac caaaaagctg ctgttgattc tgtcgcagtt
     6841 cggttttatt tttgctattg ccaccgtcgc gctcggcgaa tgggttgcgc ccacactgag
     6901 ccaaaaagcc gaaaacatca aagccgcggc catcaacggc aaaatcagta ccggcaatac
     6961 cggcctttgg ctgaaagaaa aaaacagcat tatcaatgtg cgcgaaatgt tgcccgacca
     7021 taccctgctg ggcattaaaa tctgggcccg caacgataaa aacgaactgg cagaggcagt
     7081 ggaagccgat tccgccgttt tgaacagcga cggcagttgg cagttgaaaa acatccgccg
     7141 cagcacgctt ggcgaagaca aagtcgaggt ctctattgcg gctgaagaaa actggccgat
     7201 ttccgtcaaa cgcaacctga tggacgtatt gctcgtcaaa cccgaccaaa tgtccgtcgg
     7261 cgaactgacc acctacatcc gccacctcca aaacaacagc caaaacaccc gaatctacgc
     7321 catcgcatgg tggcgcaaat tggtttaccc cgccgcagcc tgggtgatgg cgctcgtcgc
     7381 ctttgccttt accccgcaaa ccacccgcca cggcaatatg ggcttaaaac tcttcggcgg
     7441 catctgtctc ggattgctgt tccaccttgc cggacggctc ttcgggttta ccagccaact
     7501 ctacggcatc ccgcccttcc tcgccggcgc actacctacc atagccttcg ccttgctcgc
     7561 cgtttggctg atacgcaaac aggaaaaacg ctaaaccaat gccgtctgac ccccttcgga
     7621 cggcattggt ttttattatc atattcctgt agacagatag ccgttcccta ttatagtgga
     7681 ttaacaaaaa ccagtacggc gttgcctcgc cttgccgtac tattgtactg tctgcggctt
     7741 cgtcgccttg tcctgatttt tgttaatcca ctatacatta cctgtcataa cagttccatt
     7801 tttgttaaaa ctagtctatg atagcggtac aaatattgtt tacaatattt aacgcaaatc
     7861 atttgcaacc cgacaaaaga aaaacagaaa aaggaacaaa gagatgttag aagcctatcg
     7921 taaagccgcc gccgagcgcg ccgccctcgg cattcccgcc ctccctttga acgcgcagca
     7981 aaccgccgat ttggttgagc tgctgaaaag cccgcccgca ggcgaaggcg agttcttggt
     8041 cgaactgctt gcccaccgtg ttccgcccgg tgtggacgat gccgccaaag tcaaagcctc
     8101 attcctggct gccgttgccg aaggcagcgc gtccagcccg ctgatctccc ccgaatatgc
     8161 gaccgaactc ttaggtacga tgctcggcgg ttacaatatc cacgccttaa tcgaactctt
     8221 ggacgacgac aaactcgcgc ccattgccgc caaaggcttg aaacatacgc ttctgatgtt
     8281 cgattccttc cacgacgttc aggaaaaagc cgaaaaaggc aacaaatacg cgcaagaagt
     8341 tttgcaatct tgggcagatg ccgaatggtt cgcctcacgc gccaaagttc ccgaaaaaat
     8401 caccgttacc gttttcaaag ttgacggcga aaccaataca gacgacctct cccccgcgcc
     8461 cgacgcgtgg agtcgtcccg atattccgct gcacgcgctg gcaatgctga aaaacccgcg
     8521 cgacggcatc acgcccgaca aaccgggcga agtcggtccg attaaattgt tggaagaact
     8581 caaagccaaa ggccatccgg ttgcttacgt cggcgacgtg gtcggtactg gttcttcacg
     8641 caaatccgcg accaactccg tcatttggca taccggcgaa gacattccgt tcgtgccgaa
     8701 caaacgcttc ggcggcgtat gtttgggcgg caaaatcgcg ccgattttct tcaataccca
     8761 agaagattcc ggcgcgctgc cgattgaagt cgatgtatct gctctaaaaa tgggcgatgt
     8821 cgtcgatatc ctgccttatg aaggcaaaat cgtgaaaaac ggcgagactg ttgccgagtt
     8881 tgaattgaaa tcacaagtat tgctggacga agtgcaagcc ggcggccgta tcaacctgat
     8941 tatcggccga ggtctgaccg ccaaagcgcg cgaagccctg aaactgcctg cctctactgc
     9001 attccgcctg ccgcaagcgc ctgccgaaag caaagccggt ttcaccttgg cgcaaaaaat
     9061 ggtcggccgc gcctgcggtc tgcccgaagg acaaggcgtg cgcccgggta cttactgcga
     9121 accgcgtatg acgacggtcg gctcgcaaga cacgaccggc ccgatgaccc gcgacgagtt
     9181 gaaagacttg gcttgtttgg gcttctccgc cgatatggtg atgcagtctt tctgccacac
     9241 cgccgcctat ccgaaacctg tcgatgtaaa aacccataaa gaactgcccg cctttatttc
     9301 cacccgtggc ggcgtgtcac tgcgtccggg cgacggcgtc atccactcgt ggctcaaccg
     9361 cctgctgctg cccgataccg tcggcaccgg cggcgacagc catacccgtt tccccatcgg
     9421 tatttccttc cccgccggct ccggcttggt tgcctttgcc gccgcaacgg gcgtaatgcc
     9481 gctcgatatg cccgagtctg tattggtacg cttcagcggc aagctgcaac cgggcgtaac
     9541 cctgcgcgat ttggtgaacg ccatcccgct gtacgcaatt aaacaaggtt tgctgaccgt
     9601 tgccaaagcc ggtaagaaaa acatcttctc tggccgcatc ctcgaaatcg aaggcctgcc
     9661 cgatttgaaa gtggaacaag cctttgaatt gaccgacgca tccgccgaac gctccgccgc
     9721 cggctgtacc gtgaagctca ataaagagcc gattatcgag tacatgaaat ccaacgtcgt
     9781 gttgatgaaa aacatgattg ccaacggcta tcaagacccg cgcactttgg aacgccgcat
     9841 caaagccatg gaaaaatggc tggcaaatcc cgagttgctc gaagcggata aagatgccga
     9901 atacgccgcc gtgattgaaa tcaacatgga cgacatcaaa gagccgatta tcgcctgccc
     9961 gaacgacccg gacgacgtgt gcttcatgtc cgaacgctcc ggcaccaaaa tcgacgaagt
    10021 attcatcggt tcgtgtatga ccaacatcgg ccacttccgc gccgcctcca aacttttgga
    10081 aggcaaggca gacacccccg tccgcctgtg gattgcgccg ccgaccaaaa tggacgcgaa
    10141 acaattgtcc gacgaaggac actacggcgt actcggacgt gccggcgcgc gtatggaaat
    10201 gccgggttgc tccttatgta tgggtaatca ggcgcaagta cgcgaaggtg cgaccgttat
    10261 gtccacctcc acccgcaact tcccgaaccg tttgggtaaa aacacctttg tttacctcgg
    10321 ttcggcggaa ttggcagcga tttgctccaa actgggtaaa atcccgaccg ttgaagaata
    10381 tcaagccaat atcggcatca tcaacgaaca gggcgataaa atctaccgct atatgaactt
    10441 caacgaaatc gacagctaca acgaagtagc cgagaccgtg aacgtttaat ccccgtcatc
    10501 cgtatgaagt aagggattga ccgcaatgcc gtctgaacaa ccttcagacg gcattgcaac
    10561 attccgctaa cccttctttc cgcaaacgct gcaaatacgg cgttcacgcc cccacataaa
    10621 ggaaacgaca gtgaacctga aaaaccgcca ttttctgaaa cttttagact tcacgccgga
    10681 agaaatcacc gcctacctcg accttgccgc cgaattgaaa gccgccaaaa aagcagggcg
    10741 cgagattcag cggatgaaag ggaaaaacat cgccctgatt tttgaaaaaa cctctactcg
    10801 gacgcgctgc gcgtttgaag tcgccgcgcg cgatcaaggc gcgggagtga cttatttaga
    10861 gccgtccgcc agccaaatcg ggcataagga aagcatcaaa gacaccgccc gcgtgttggg
    10921 caggatgtac gatgccatcg aatatcgcgg tttcggtcag gaagttgttg aagaattggc
    10981 gaaatacgcg ggcgtacccg tgttcaacgg gctgaccaac gagttccatc ccacacaaat
    11041 gcttgccgac gcactgacta tgcgcgaaca cagcggcaaa cctttgaacc aaaccgcgtt
    11101 tgcctacgtc ggcgacgcgc gttacaacat gggcaattcc ctgctgattt taggggcaaa
    11161 attggggatg gacgtgcgta tcggcgcacc gcaaagcctg tggccgtctg aaggcattat
    11221 tgccgccgca cacgccgccg ccaaagaaac cggcgcaaaa attaccctga ccgaaaacgc
    11281 gcatgaagcc gtgaagaatg ttgattttat tcataccgat gtgtgggtca gcatgggcga
    11341 gccgaaagaa gtctggcagg aacgcatcga tttgctgaaa gattaccgcg ttacgcccga
    11401 actgatggcg gcatcgggca atccgcaagt caaattcatg cactgcctgc ccgccttcca
    11461 caaccgcgaa accaaagtcg gcgaatggat ttacgaaacc ttcgggctga acggtgtgga
    11521 agttacagaa gaagtattcg aaagccccgc cagcatcgtg ttcgatcagg cggaaaaccg
    11581 tatgcacacg attaaagcgg taatggtcgc ggctttgggc gactgacaga actgtgcctg
    11641 tttaaattca tccgcaacac agataccgtc tgaacacgat gttcagacgg tatcca
//
LOCUS       DAWEYF010000053        11680 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.053, whole genome shotgun sequence.
ACCESSION   DAWEYF010000053 DAWEYF010000000
VERSION     DAWEYF010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11680
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.053"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            125..1117
                     /gene="pheS"
                     /locus_tag="WGN93_000994"
     CDS             125..1117
                     /gene="pheS"
                     /locus_tag="WGN93_000994"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ0226911.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEVKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
     gene            1294..2358
                     /locus_tag="WGN93_000995"
     CDS             1294..2358
                     /locus_tag="WGN93_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ0226912.1"
                     /translation="MIKSFELEKFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFSLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQATWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            2365..2883
                     /locus_tag="WGN93_000996"
     CDS             2365..2883
                     /locus_tag="WGN93_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226913.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVLLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            2919..5282
                     /locus_tag="WGN93_000997"
     CDS             2919..5282
                     /locus_tag="WGN93_000997"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ0226914.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVVAEVKSVEKHPDADRLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     CVFEIARVFSKGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGETRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            5356..5658
                     /locus_tag="WGN93_000998"
     CDS             5356..5658
                     /locus_tag="WGN93_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ0226915.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            5642..5950
                     /locus_tag="WGN93_000999"
     CDS             5642..5950
                     /locus_tag="WGN93_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226916.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLADLDKELC
                     "
     gene            complement(6229..6384)
                     /gene="rpmG"
                     /locus_tag="WGN93_001000"
     CDS             complement(6229..6384)
                     /gene="rpmG"
                     /locus_tag="WGN93_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ0226917.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(6416..6649)
                     /gene="rpmB"
                     /locus_tag="WGN93_001001"
     CDS             complement(6416..6649)
                     /gene="rpmB"
                     /locus_tag="WGN93_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ0226918.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(6899..8425)
                     /gene="farB"
                     /locus_tag="WGN93_001002"
     CDS             complement(6899..8425)
                     /gene="farB"
                     /locus_tag="WGN93_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ0226919.1"
                     /translation="MDYPPLKGAALAWITLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVIFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(8449..9621)
                     /gene="farA"
                     /locus_tag="WGN93_001003"
     CDS             complement(8449..9621)
                     /gene="farA"
                     /locus_tag="WGN93_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ0226920.1"
                     /translation="MATRGDEVKIQNGQEADSAKAKRKRRLTALTLLFALAAVAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     gene            complement(9665..10024)
                     /locus_tag="WGN93_001004"
     CDS             complement(9665..10024)
                     /locus_tag="WGN93_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ0226921.1"
                     /translation="MINLELKAINLYDCAFEDFVPEIKDNFCVGIDLDIGTDDSDAAD
                     IFSVRICSPKWILHNCFQNQRVKWGAGMMIMNEFNHSVIKSEIEKILKECSKETWEKS
                     LTYLLRFFSWEFEDYQC"
     regulatory      10239..10283
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            10288..10761
                     /gene="queF"
                     /locus_tag="WGN93_001005"
     CDS             10288..10761
                     /gene="queF"
                     /locus_tag="WGN93_001005"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ0226922.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFETLARKRLFEHDSQ"
     gene            10836..11522
                     /locus_tag="WGN93_001006"
     CDS             10836..11522
                     /locus_tag="WGN93_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ0226923.1"
                     /translation="MYAFTAAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
BASE COUNT         3118 a         2857 c         2825 g         2880 t
ORIGIN      
        1 agaaaattta tccaatggat tgaccgtgaa gaaaataagg tcgtctgaag agtctgatat
       61 gtcaggctat acaggcggcc tcgttgtttc aggtggcata tcattaattg acagacttga
      121 tattatggaa aatgtaaacc gcatcgttgc agaaggcatt gccgcagtag aagctgcgca
      181 agacttcaac gctctagaac aaatcaaagc ccgttatctt ggcaaaaccg gcgagttgac
      241 cggacttctg aaaactttgg ggcaaatgtc gcctgaagag cgcaaaacca taggtgcgca
      301 tatcaatgaa tgcaaaaacc ggtttcagac ggcttttaat gccaaacgcg atgccctcaa
      361 cgaagtcaag ctgcaagccc gacttgccgc cgaagccctc gatattaccc tgcccggacg
      421 cgctcaggaa ggcggcagcc tgcatcccgt aaccctgacc ttgcaacgtg tggtcgaact
      481 ctttcacgga atgggtttcg aagtggcgga cgggcctgaa atcgaagacg attttcacaa
      541 tttccaagcc ctgaacatcc ctgcaaacca tcctgcccgt gcgatgcagg atacgtttta
      601 cgttgaaaac ggcgatgttt tgcgtacgca cacttccccg attcaaatcc gctatatgct
      661 cgataaaaaa gagccgccca tccgcattat cgcccccggc cgcgtttacc gtgtggacag
      721 cgatgccacg cactcgccta tgttccatca ggcggaaggt ttgtgggtag aagagggcgt
      781 aacttttgcc gatttgaaag cagtgttcac ggattttatc cgtcgcttct ttgaacgcga
      841 tgatttgcaa gtacgtttcc gcccgtcttt cttcccgttc accgaaccgt ctgccgaaat
      901 cgacattatg ggcgaaaacg gcaaatggct ggaagtcggc ggctgcggca tggtgcatcc
      961 caacgtgttg aaaaatgtga atatcgattc tgaaaaatac accggtttcg ctttcggtat
     1021 cggtctcgac cgtttcgcga tgctgcgtta caacgtgaac gatttgcgct tgttttttga
     1081 taacgatttg aattttttga agcagtttgt aaaatgattg tgtaggctgc ctaaaaatga
     1141 aaaaagcagc ctgtgcctac ctcagaaagc taaatcatga aacgctatgt cgctccatta
     1201 tccgcctgct atgcgtttac tatggtgctg tggttgctgt ctttttacaa tgtggcttgt
     1261 acaaatattg ttgatatata ttagggggat tatatgatta aatcatttga gcttgaaaaa
     1321 ttcggaccga ttagcttatt gaaggctgat aatttaggga aaataaattt aattattgca
     1381 gaaaatagca aagggaaaac ttttatttta aaggcattat atagtgtttt aaaaagtcat
     1441 gaggaagctc ataaaggaaa gaatattcgt gatttttctg aggaattgcg agataagcta
     1501 tattggacgt tccaagtaga ggaaattggt gatttagtta caagaggaaa agaaaatcca
     1561 aacgaacggc ctcttaagtt aagtatgact ttagaagata gttcttcagt tttgttttct
     1621 tttggtagaa ctaccaaaaa gctaattaaa ccggagctat acgaactttc tcctagaata
     1681 aacgctaact ctattttttt accacccaaa gaagttctat cactatttga tgtaattaaa
     1741 aaatcagagg aagaaaagag atttggtttt gatgctactt acattgattt ggtaaaagca
     1801 ttggatatta aaccaacaaa agggaggaat taccctgagg cagcggaagc tagaaaggat
     1861 ctagaagcat tgtttggcgg ttatgttagc tacaatgata aaaagaaggc atgggtatat
     1921 gaaaaagata gacaaacttt ctctatcaat tctacagcag agggggtaaa aaagattggg
     1981 atattagaca ctctattagg aaatcggttt ttgagtcctg gatcaatctt atttattgat
     2041 gagccagaag ctaatctaca tccgaaagca attaatcaat ttctagaaat tctgttttcc
     2101 ttatctaaat ccaaattggg aatacagatt tttatgagta cgcattcata ttttgttatc
     2161 aagaagctgt gtttattagc tagaaagcat agtgaaagta ttcctgtttt tatgcctggc
     2221 aaagaaaagg aacaggctac ttgggtgcag gaaaatttac aaaatagcat gccggataat
     2281 gaaattattg gtgagtctat tcgattgttc agagaagaaa taggtgtttt atctccggaa
     2341 acagcatgga ttggttaggt ttttatgagt gaaataataa atctcactga atcaggtata
     2401 acttttaatc tagtaaaaaa taacctgttt tatatagaac catatatccg gaagagaagg
     2461 caagaaggta ttaagacagt agagtttatc tatctgcaag aagataattt gttatttgtt
     2521 gaggcaaaac aaagtattcc aaatcaagaa agatctcctg agcgttttga tgaatatatt
     2581 tcagagattt atcaaaaatg gtgtaatgca ttaaatgttg aaattttggg aatattaggc
     2641 agagaagata tcaaagaaac aattatgcct agtgcttttt caaatttgca atggggtagc
     2701 atagaaatca aattattact ggttatcccg gatgtgctgc ttaattatct tgggcaattg
     2761 aatgaattaa taaagcaaga atttaataag aaagatactt tgcggttgat ttctttatgg
     2821 aacatttctg tagaagtaat taatagggac ttagccattc aaaaaggttt agctagctct
     2881 tgaaaatcta aagttaatta gttaattgag aacataacat gcaattctcc tactcatggc
     2941 tgaaaaccca agccgatacc gaactttcct ccgataagct ggaacatctg ttaaccatgt
     3001 ccggcttgga agtggaagaa gccgagactg ccgcgcctgc gtttgcgggc gtggttgttg
     3061 ccgaagtgaa atccgttgaa aaacatccgg atgcagaccg tttgaacgtt acccaagtcg
     3121 atgcgggtac gggtgggttg gttcagatcg tgtgcggtgc gccgaatgtg aaagcgggca
     3181 tcaaagtgcc gtgttcgctg ccgggtgccg ttttgccggg taatttcaaa atcaagccga
     3241 ccaaaatgcg cggcgtggtg tcggacggga tgttgtgttc caccgacgaa ctcggtctgc
     3301 ccgacgacgg tgtgaacggc ctgcacattc tgcctgaaga tgcgcccgtc ggtaccaata
     3361 tccgcgaata cttggatttg gacgatacgc tgtttacgtt gaaaattacg cctaaccgcg
     3421 ccgactgctt gagcatcaaa ggcattgcgc gcgaagtgtc cgcattgacg gggtgcgcgt
     3481 tcaggcagcc cgaaatccat accgcgccga tcacgggcag tcgaaaacag cccgtgcaga
     3541 ttaacgcgcc tgccgattgc ggccgtttta tcagccgcgt tattgaaaat gtcaatgcga
     3601 aagcggctac tcccgattgg atgaaacaac gtttggagcg cagcggcatc cgcagtattt
     3661 ccgcgctggt ggacatcggc aattatgtga tgctggaaat cggtcagccg atgcacgttt
     3721 ttgatgccga caaactttcc ggcagcctgc acatccgccg cgcgcgcgaa ggggaaacgc
     3781 tggaatgcct gaacgagaaa accgtttccc tgtctgaaaa cacgctggtc gtggcggacg
     3841 aaaaaggcgt gttgagtttg gcgggcttaa tgggcggcgc ggcgagcgcg gtttcagacg
     3901 gcacgcaaaa tatcgtgctg gaagcggctt ggtttgcgcc cgaaatcatc gccggcaaat
     3961 cgcgccaata cggtttcggt tcggattcgt cgttccgctt cgagcgcggc gtggattacc
     4021 gtttgcaggc ggatgccatt gagcgtgcta ccgaattggt gttgcagatt tgcggcggtg
     4081 cggcaggcga aatggtggaa gcgcaaggcg aattgcccga agcgaagcag gtcggattgc
     4141 gtttgggccg tctgaaaacc gtgttgggcg tggacattcc tgccgaacag gtggaaacca
     4201 ttttgcaaca cttgggcctg cagcccgaga aaacggcgga aggcttccgc gttaccgcgc
     4261 cgagcttccg ttttgacatc gaaattgagg ctgatttgat tgaagaaatc ggacgcgttt
     4321 acggctatga aaacatcccc gacgattaca cgtcaggccg tctgaaaatg ctggaactgc
     4381 ccgaaacacg ccgcccgcgt tttgccgttt acaacgaaat ggcggctcgc ggttaccgcg
     4441 aagtggtcag ctatgccttc gttgacgagc agtgggaaca agattttgcc gccaacgccg
     4501 accccatccg cctgcaaaac ccgctggcgg cgcagtatgc cgtgatgcgt tccacgctca
     4561 tcggcggctt ggtggaaatt ctgcaaaaca atctgaaccg caaacaaaac cgcgtgtgcg
     4621 tgtttgaaat cgcccgcgtg ttcagcaaag gttcagacgg ccagtttgtc caaaacgaac
     4681 gcatcggcgg attgtggtac ggcgcggtca tgccggaaca atggggcggg aaaacgcgca
     4741 atgcggattt ttacgacatc aaggcagatg tggaaaatct gttgaaaaac aaagcagtcg
     4801 agttcgttaa aaccggacat cctgccctgc atcccggacg cgccgccaat atcgtttcag
     4861 acggcaaagt catcggcttt gtcggcgaac tgcatccgaa atggctgcaa aaatacgacc
     4921 tgccgcaagc gccgctggta tttgaaatcg atatggcggc cgtgttggaa tgcggggaaa
     4981 cgcgctatcg ggccgtatcg aaattccagc cggtgcgccg cgatttggcg tttgtgatgc
     5041 cggaagctat gagccatgat gatttgctgc ttgtcttgaa aggcgcggca aacaagttgg
     5101 tacaggaaat cagcgtgttt gacgtgtatc gcggcacggg actgcccgaa gggatgaaga
     5161 gcgtggcggt caaagtgatt ttgcaggata tggaaaacac gctgacggat gaggcagtcg
     5221 agccgcttat cggaaaactg attggcgcgg caacggcggc aggggcgcgg cttcgcagtt
     5281 aaaaaataaa tattcgcttg aattttaaat aaaaattggt aataatccac aactgttaca
     5341 acagaaggta atcatatgac tctcactaaa gcagaactgg ccgatatttt ggtagacaaa
     5401 gtcagcaacg tcaccaaaaa cgatgccaaa gaaatcgtcg aactcttttt tgaagaaatc
     5461 cgcagcactt tggcaagcgg cgaagaaatc aaaatttccg gtttcggaaa tttccagttg
     5521 cgcgacaagc cgcaacgccc gggtcgtaat cctaaaaccg gcgaggaagt gccgattacc
     5581 gcccgccgcg tggtaacttt ccatgccagc cagaaactca aaagcatggt ggaacactac
     5641 tatgacaaac aacgttgatt tgaaggttcc cgcaaaacgc tatttcacgc tggacgagtt
     5701 gtgcggactg ttgcaaatca gcccctatgg ttttgcgcaa tggcagcatg atcacggtgt
     5761 ggttgtcggt tacggcggcg aacgctacac ccgtttggat gtggtgaaac tgttgaaatt
     5821 gcagagcacg tttgcaccgt atgcagaagg tgcggaatcg ggttcggacg gcaaccgtcc
     5881 ggttacgctt caggaaatcg gagacggtct gaaagacctg ttggcggatt tggataagga
     5941 attgtgctga tttgaggccg gttgcaggta tgcagccggt tttgttttac acgctaaaaa
     6001 ataattatag tggattaaca aaaatcagga caaggcgacg aagctgcaga cagtacaaat
     6061 agtacggaac cgattcactt ggtgcttcag caccttagag aatcgttctc tatccttggc
     6121 agacggtttg cagcagattc gcatacggca gatgtttcaa gcggaaaaga aacacgataa
     6181 aaataaaaaa gcctccgaac agtcggaggc tttgctttca aactgaaatt atttcagttt
     6241 ggtttctttg tacactacgt gtttgcgggc aaccggatcg aattttttaa tttccagttt
     6301 gccgggcata gtgcgtttgt ttttggtagt ggtgtagaag tgaccagtac ctgcactgga
     6361 ttccagtttg attttatcgc gcattgcagt aatccttaat taaatagtgt ttaaattaag
     6421 cttcgccgcg agcacgcaaa tcagccaata cgacatcaat gcctactttg tcgatggtac
     6481 gcagtgcagc gttggaaacg cgcaggcgaa cccagcggtt ttcactttct acccaaaaac
     6541 gacgtgattg caagttgggc aaaaaacggc gtttggtttt gttgttggcg tgcgatacgt
     6601 tgttgccgga catcgggcgt ttgccggtca ctttgcaaac tcgtgccata atcagtctcc
     6661 aaacttctaa aatagtaaaa cgcgatttat accacgaaaa acagtgttag ttcaagtgtt
     6721 ttaaagaaaa acggctgttt tgcgcggata atccttccga ttgtcgcatc tgtggaacgt
     6781 ttgcaggtgc gaaacagatg gggcgcgatt atagcggatt tcgggaactg ctgcattcaa
     6841 aatgccgtcc gaacatattt ccagtatttt cagacggcat ttcaagtttt caaatccctc
     6901 aatgtccacc gccgccgccg ttgtggaacg gcggttttgc cagccatatg acgggtatca
     6961 tgataatgaa taacaagctg cccgccataa agatttcgtt cgagccgata ataaaaccct
     7021 gctgggtaat ggtattgttg atgatgccta gggtttgaat gtcggaaacg ccgtgctggg
     7081 acaaatgagc ggccgtttcg tgcaatgttg cggaataggg cgtgatgtgt tcggcaaagc
     7141 gtgtatggtg caacgcttcg cgccgttccc acagggtgct gacgacggat acgccgacac
     7201 cgcccatcag cacgcgcaag aaattcgaca ggctgcctgc ggcggcaatc tgtccgccct
     7261 tcatgtgcga cagtgtgatg gtggtcagcg gcaggaagaa catggcaacg cctgccccct
     7321 gccaaaactg cggccagatg acgttgccga tatccatgtc ggcataaaaa tcggtgcgcc
     7381 aatagaaagt aaaggcaaag gtcaggaagc tggcggttac gagcaggcgc atatcgattt
     7441 tattgccgaa cctgccgatt aacggagaca ggaagacggg caggatgccg acgggtgcgg
     7501 cggcaagccc cgcccacgtg gaggtatagc ccaggttggt ctgcaacact aacggcagca
     7561 aggtcagcgt ccccatatac accataaaac ccaatgatgt ggcaattacg ccgacggtaa
     7621 aattccgatc tttaaacagc gataaatcga caatcggata tttttctccc aattcccaaa
     7681 caataaaata cgacaaacac accagtgcga ctacgcccaa ggtaatgatt tctccagagg
     7741 cgaaccagtc gagttcctta cccctgtcca gcatcatctg taacgcgccg ataccgacta
     7801 ccatcaatgt aagcccgaca tagtcggtcg gcattttaac ggtttccgtt tcccgatatt
     7861 tcaaatgttt ccatgtaatc catgccgata tgataccgat agggatatta atgaagaaaa
     7921 tccaacccca atgccagttt ccggaaatcc aaccgccgag tatcggcccg agaacagggg
     7981 cgacaacgac ggtcattgcc cacaatgcca gtgccagcgt ccgttttgcg ggcggatagg
     8041 atgccattaa caggctttgc gacaggggaa tcagcggccc ggcgataaag ccctgcaaga
     8101 tgcggaaaat taccaaagcc tgaaggttgg gcgcgatgcc gcacagccac gatgtgatga
     8161 cgaaaccgac agcggcggcg gtaaacaatt tgacctcgcc gatacgtttt gccaaaaagc
     8221 ccgttaacgg cacggaaacg gcgtttgcca cagcaaaaga agtaatgacc cacgtcccct
     8281 gagtggttgc cgcaccgagg ttgccggcga taacgggaac ggcgacattg gcgatagtcg
     8341 tatctaaaac ttccataaat acggcaagcc ccaaagacag cgtaatccat gccaatgccg
     8401 cacccttaag cggtggataa tccattgtgt cctccgtttc agacggcatc agggcgcgga
     8461 ttgcccgagg atttcatcga ccgtccgatc gacttccgac cagtcggtac tttccatttc
     8521 cggcaatgcc gcacccggcg tttttgaaac aggcgcgcct gcggcggaag tatccacttt
     8581 aaccgtcatc gacaaaccga tacgcaacgg atgcctgtcc acatcttcgc ggttcagcac
     8641 gatacggacg gggacgcgct gcaccacttt aatccagttg cccgttgcgt tttgcgccgg
     8701 aatcagcgaa aacgcgctgc ccgtacctgc cgaaaaacct gccaccctgc cgcgataaac
     8761 aatttgtttg ccgtacaaat cggacaccag ctcggcaggc tgtccgattt tcatatgccg
     8821 caactgcgtc tctttaaaat tggcatccac ccacacatcc gacagcggca ccaccgccat
     8881 cagcggcgcg cctgccgcca cctgctgccc gacctgcacc gaacgcttcg ccacctgacc
     8941 gtccgccggc gcgcggattt gcgtccgctg aaggttcaac cacgcatctt tcaacctgcc
     9001 gattgccgtc tgaaccgccg gctgttcgcg caaagaaacc tgaccgccca aagccgcgcg
     9061 tgccgaagac tcttccgcca aagccgcctt aactgccgcc tgcgcctgag acactgccgc
     9121 acgggcgtgt gccagctctt cggcggacac cgcgcccgat tccgccaaag cagaccggcg
     9181 gcgcaaatca tcctgcgcgc gtgccaaatc cgcacggcgc aaggcaacct gcgcccccgc
     9241 ctgcgaagtg gcggcatttt gccggcggtt ttgccgcacc gcctgaacca gctcgttttt
     9301 tgcccgctcg taagccagca catcattatc gtcgtccaat accgccagca cgtcgccttt
     9361 tttcacggca tccgtatcgt cgtgcaaaac cttccgtacc gtaccgccct tttgcggcgt
     9421 aacctgaacc acgcgtccgg caacataagc gtcttccgtt tcctcttcgt gctgccacca
     9481 taaaaaaaac gccgacccag cggctacggc ggcaagcgcg aacagcagcg tcaatgccgt
     9541 caggcggcgt ttgcgtttgg cttttgcgct atcggcttct tgcccgtttt gaattttcac
     9601 ttcgtctccg cgtgttgcca ttattccaat tccgaatact tctaatacta tgtttttgat
     9661 ttaattagca ctgataatct tcaaattccc acgaaaaaaa acgaagtaaa taagtcaatg
     9721 acttttccca agtttctttt gaacattctt taagaatttt ctcaatttcc gatttaataa
     9781 cagaatgatt aaattcattc ataatcatca tacccgctcc ccatttaacc ctttgatttt
     9841 ggaaacaatt atgcaaaatc catttaggag agcatatgcg aacagaaaat atatctgcag
     9901 catcactatc atcagttcct atgtctaaat caattcccac acaaaaattg tctttgattt
     9961 cgggaacgaa atcttcaaag gcacaatcgt aaagattgat ggctttcaat tctaggttaa
    10021 tcattttata ttcaaaataa ataaaaccaa ttaaagattg gttaggattc tataccctgg
    10081 caataactca atcaagttaa tgatttagaa tgaatattca aataaactgt atcagcccgg
    10141 cctcacagaa ctatttatat ccacacatca ccgagtaaag caattaccca tactaaccga
    10201 agaaaactac acaaataccg ccacttatat tacaatcgcc gctcgtggtt cgaaaacctc
    10261 ccacattaaa aaactaagga aaccctcatg tcccgcaaca acgaagagct gcaaggcatc
    10321 tctcttttgg gcaatcaaaa aacccaatat ccgaccggct acgcgcctga aattctcgaa
    10381 gcattcgaca acaaacatcc cgacaacgac tatttcgtca aattcgtctg tcccgagttc
    10441 accagcctct gccccatgac cgggcagccc gacttcgcca ccatctacat ccgctacatt
    10501 ccgcacatca aaatggtgga aagcaaatcc ctgaaactct acctcttcag cttccgcaac
    10561 cacggcgatt ttcatgaaga ctgcgtcaac atcatcatga aagacctcat tgccctgatg
    10621 gatccgaaat acatcgaagt attcggcgag ttcacaccgc gcggcggcat cgccattcat
    10681 cctttcgcca attacggcaa agcaggcacc gagttcgaaa cattggcgcg taaacgcttg
    10741 ttcgaacacg acagccaata aaccatcctt cccatatttc agacggcatt ccttcgatac
    10801 gatatgccgt ctgaacgcct ttccgaaaga tttttatgta cgcatttact gccgcacagc
    10861 aacagaaggc actcttctgg ctggtgcttt tccatatcct catcatcgcc gccagcaact
    10921 atctggtgca gttccccttc caaattttcg gcatccacac cacttggggt gcgttttcct
    10981 tccccttcat cttcctcgcc accgacctga ccgtccgcat tttcggttcg cacttggcac
    11041 ggcggattat cttttgggtg atgttccccg cccttttgct ttcctacgtc ttttccgttt
    11101 tgttccacaa cggcagttgg acaggcttgg gcgcactatc cgaattcaac acctttgtcg
    11161 gacgcatcgc cttggccagc tttgccgcct acgcgctcgg acaaatcctt gatatttttg
    11221 tattcaacaa attacgccgt ctgaaagcgt ggtggattgc cccaaccgca tcaaccgtca
    11281 tcggcaacgc cttggatacg ttggtatttt tcgccgttgc cttctatgca agcagcgatg
    11341 aatttatggc ggcaaactgg cagggcatcg cttttgtcga ttacctgttc aaactcaccg
    11401 tctgcggtct gtttttcctg cccgcctacg gcgtgattct gaatctgctg acgaaaaaac
    11461 tgacgaccct gcaaaccaaa caggcgcaag accgccccgc gccctcgctg caaaatccgt
    11521 aaaacagccc tgccgggaat cgggacggtt gggttttctt ttatttgcaa acactgtcgg
    11581 aacggataaa tccggattcc tacctacttc gtcattcccg cgaaagtggg aatccggtgc
    11641 gttgggtttc catcatttcc gataaactcc tgccgcgttg
//
LOCUS       DAWEYF010000054        11664 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.054, whole genome shotgun sequence.
ACCESSION   DAWEYF010000054 DAWEYF010000000
VERSION     DAWEYF010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11664
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.054"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(174..866)
                     /locus_tag="WGN93_001007"
     CDS             complement(174..866)
                     /locus_tag="WGN93_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ0226924.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGAPKYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(974..2167)
                     /locus_tag="WGN93_001008"
     CDS             complement(974..2167)
                     /locus_tag="WGN93_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ0226925.1"
                     /translation="MSNQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2296..3033)
                     /gene="pxpA"
                     /locus_tag="WGN93_001009"
     CDS             complement(2296..3033)
                     /gene="pxpA"
                     /locus_tag="WGN93_001009"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ0226926.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGRVKAVNGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3020..3949)
                     /locus_tag="WGN93_001010"
     CDS             complement(3020..3949)
                     /locus_tag="WGN93_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ0226927.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3946..4593)
                     /gene="pxpB"
                     /locus_tag="WGN93_001011"
     CDS             complement(3946..4593)
                     /gene="pxpB"
                     /locus_tag="WGN93_001011"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ0226928.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4777..6984
                     /gene="uvrD"
                     /locus_tag="WGN93_001012"
     CDS             4777..6984
                     /gene="uvrD"
                     /locus_tag="WGN93_001012"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ0226929.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQMPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNATLESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7341..7880
                     /locus_tag="WGN93_001013"
     CDS             7341..7880
                     /locus_tag="WGN93_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ0226930.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8070..8285)
                     /locus_tag="WGN93_001014"
     CDS             complement(8070..8285)
                     /locus_tag="WGN93_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226931.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8293..8496)
                     /locus_tag="WGN93_001015"
     CDS             complement(8293..8496)
                     /locus_tag="WGN93_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226932.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8409..8768)
                     /locus_tag="WGN93_001016"
     CDS             complement(8409..8768)
                     /locus_tag="WGN93_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ0226933.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8821..9198
                     /locus_tag="WGN93_001017"
     CDS             8821..9198
                     /locus_tag="WGN93_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ0226934.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWNRAKRHLRKFNGIPKAHFELYLKECEW
                     RFNNSEIKVQISILKQLVKSSLS"
     gene            9397..10017
                     /locus_tag="WGN93_001018"
     CDS             9397..10017
                     /locus_tag="WGN93_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ0226935.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10040..11491
                     /locus_tag="WGN93_001019"
     CDS             10040..11491
                     /locus_tag="WGN93_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ0226936.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSIAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
BASE COUNT         2874 a         3086 c         2849 g         2855 t
ORIGIN      
        1 ctctttcagt tacagcagct tgatcccttt cccttatcca acgggggaag gctaggatag
       61 ggtggcttgc aaatatacag aacaagggac aagagccacc ctctctccaa ccctctccct
      121 ccgtacggga gggggtggat tctcgcgggc gaagcccacg ctacggttag cctttacccc
      181 agcacaaaca attcccgccc gtgcgccttc agccaacttt tagcattgtc ggtatgcggc
      241 gtcagcgtgt tcaccaaatg ccaaaagcgc ggactgtggt cggggtggcg gaggtggcag
      301 agttcgtgga tgcagacata gtcggcaacg tacttgggcg cgccgatcag ccgccagttg
      361 aggcggatgc cggtgtgcgg gcggcatacg ccccaaaagg ttttggcgtt gctcaggtct
      421 gtggcggtgg gcgtcagtcc tgtttcggct gcgtgttttt caaggcgggg cagcaggtat
      481 tcgcgggcgc gttcgttcaa caggcggcgc aggtggtcga tttgtgcggc ggtttctttt
      541 cggggaagca ggatttcaga cgacgtgata cggatatggc tttggctgtg ggtatccagc
      601 ttggtcttta ttccccgata ccaaatccac tcgggtaagt ttgggtggga aacaggatgc
      661 acgggcgttt tggcaagcgt gttccgcaaa atcgtttcgt ttgccgccag ccagtttgct
      721 aacgcgtggt cttgaaaaaa gggtgggacg ttgatgctga ccgtctgcat attgacgggg
      781 cgcagaatca gatttttctt ggcactgcgt ttgagttcga tttcgatgca caaaccgtcg
      841 gaaagagtat aggtgaagcg tttcatagtt gtgaataggt ttcagaccgg atacatcgtc
      901 tgaaacagga attttccata tcaggcggca aacttcggat aatatacaaa atcaaacatc
      961 tgcgctacaa ggttcagccg aacaagccgc cgatatattt gctgatggta atggcgctga
     1021 gtactgccat caaaccgacc acaatcacgc cggaaacggt gagccacagc gggtgtttgt
     1081 agtcgccgac aattttggtt ttgtaggcgg caatcagaat cagaccgagg gaaatcggta
     1141 aaatcaggcc gtttaatgcg cctacgaaca ccagcacctg cgccggtttg ccgatggtgg
     1201 aaaatacggc ggtggacacg gcgataaagg caataatcca tttgttttta ttgcgttcga
     1261 tagacgggct gagaccggag aagaacgaca ccgaagtata agccgcacca atcaccgaag
     1321 taatcgaagc cgcccaaatc accacgccga aaatcagcag gccgatgtat cccgccgcat
     1381 attcaaacgg tgtggaagca gggttgtcgg gattgagctg tacgccttgg ctgaccacgc
     1441 ccaaaaccgc caaaaacaat acaatccgca taatcgaggc aatcaggatc gcccgcaccg
     1501 agctttggct cacttccggc aacgccgatt tgcctttgat gcctgcgtcc agcagacggt
     1561 gcgcaccggc gaaggtgatg tagccgccga ccgtgccgcc caccagtgta acaatcgcca
     1621 ttgcatcgag tttttccggc ataaaggtat gcacggcggc atctgccagc ggcggattcg
     1681 cctgccatgc cacataaacc gtcagcgcaa tcattacgaa acccatcact tgggcgaatt
     1741 tgtccatcac tttgcctgct tctttaaaca gaaacacacc gatggcaatc acgccgctga
     1801 tcacggcacc ggtttccggc gacagtccgg tcagcaggtt cagacccaag cctgcgccgc
     1861 cgacgttgcc aatattgaac gccaaaccgc ccatcacaat cagcacagcc aagaaatagc
     1921 ctgcgccggg caagacctga ttggcaatat cctgcgcctg tttttcggaa acggcgacaa
     1981 tccgccaaat attgagctgc gccccgatgt cgagcagaat cgagagcaga atcacaaagc
     2041 cgaaacttgc cgccagtgct tgggtgaagg tggcggtttg ggtcagaaag cccgggccga
     2101 tggcggaagt cgccatcagg aatgcagcgc cgattaaggc atttctgcgg tttttttgat
     2161 tagacataat cgcttatcct ctataaaatt ggttgttgct gtgtttgggc gaaacctgcg
     2221 gttttagcta cgcagaaact cgctttgctc gttttggcga aacctgcggt tttcagacgg
     2281 cctatgaact gtttttcaag cagaaacttt gatgcctgcc gccagtagtt cctgccggat
     2341 tttttcggca aacaccacgg cgtgcggccc gtctccgtgc agacagatgc tgtcggcttg
     2401 cacggcaacc aggctgccgt tcactgcttt gacccgcccg tcccgcacca tctgcaatac
     2461 ttgggcgatg gcttcttcgt cgctgtccac ctgcgcatcg gggcggctgc ggggaaccag
     2521 cgtaccgtcg ggcatatagc ggcggtcggc gaatacttcg gaaatcacac ccaagcctgc
     2581 ggcttttccg gcttccaaga gcaggctgcc ggaaagtgcc atcaatttca atttcgggtc
     2641 gaaatccgcc acaattcggg caacggtatc cgccagcgca cggtttttcg ccgcttggtt
     2701 gtacattgcg ccgtgcggtt tgacataagc catttccaaa ccctgatcac ggcacaaggc
     2761 ctgcaatgcg cccaactggt aattcagaca cgcccgcaaa tcggcttcgg acagattcat
     2821 ttcggtacgg ccgaagtttt cccgatcggg atagccgggg tgtgctccga tgcgcacgcc
     2881 gttttgttgg gcatacgcca atgccgcccg aatatcggca atgctgccgg cgtgttgggc
     2941 gcaggcgatg ttggccgaag taatcagctg caacaaggct tcgtcgctgc cgcagccttc
     3001 ggcgagatcg gcgtttaaat caacctgctt catgggtgat tctccgtatt tggttcagat
     3061 aggcttggtt tttgcgccgc agggcggtgg cttctttcaa gccgattatt ttgaatttga
     3121 ctttgctgcc gaagcgcacc tgtgccagcc tgcccaaatc ggcggcggca acggtagcga
     3181 ttttcggata accgccggtg gtttgtgcat cggccagcag gataatcggt ttgccgccgg
     3241 gcggcacctg cacggttcct gcctgaacag cgtgggacag catttccaaa ggttgcgaca
     3301 gggtcagcgg ctgtccgtcg aagcggtagc ccatgcggtt gctatcgctt tgcagcgtcc
     3361 acgtttcccg ttccagattc agacgccctt tttcactgaa agcggcatat tccgacgaag
     3421 gaacaaggtg gacggtatcg gtaaacggta tcggggcaat gccgactttg gacaattcct
     3481 gcgcaccttt gccgatgggg agacaatcac ctttttgcag cattctgccc tgatggccgc
     3541 cgaaaccggc tttcaggtcg gtgcttctcg aacccatcac ttccggcaca tcaaatccgc
     3601 ccgccacgca cacatagccg tacatgccct gcacggcacg caccattttc aaggtctgcc
     3661 ctttgcgggc ggtataacgc caatacgaat agaccggttc gccgtccaat tccgcctgat
     3721 acacggcacc ggtgagacaa aacggcgtat cccgttcaaa caccagcatt atcccgccca
     3781 aagcgatttc gattgcggcc gtgccttcgt cgttgcccaa taaaatatta cccgccgcca
     3841 aagcaaccgt gtccatcgca ccggcatgac cgatgccgta acgccggtgt ccgtagcgtc
     3901 cggtatcctg aatatgcgcc ggtgcctgca ctgccgaaac gtgaatcatg gctcaatcct
     3961 ttctgcaaca aagcggactt ggtcacccgc cgccagcagg gtcggcggat tcaaatcggc
     4021 tcggaacaag ggtaattcgg ttctgccgat aatctgccag ccgccgggcg aagcgaacgg
     4081 atacacaccg gtctgactgc cgccgatacc gaccgaaccg gcaggaacgg acgttctcgg
     4141 cacggcacgg cggggcgtgt gcaatgcttc gggcaagccg cccagataag ggaaaccggg
     4201 ctggaagccc atcataaata cggtataagt ttgcgccgta tggcggcgga cgatttcgga
     4261 aataaccgtc tgatggaaag cagcgacttc cgccaaatcc gggccgtatt cgccgccgta
     4321 gcagacggga atttccacca gtttgccctg atggtctgta acggcggtgt gttcccacac
     4381 atattgcaat tcatcggcaa gcgtcgccaa atcggtatcg aaacgggtga acacggtcag
     4441 attgttcatg ccgaccacca cttcctcaat cctgtcgtgc tgcccgagcg cagcggcaaa
     4501 cgcccacaac ttttgctgtt tgcccagttc ggaaggcgca ttcagtcggc agaccaaagc
     4561 ggattcgctg attggtgtga tctctattct catttgttgt tcattttggt tatgttttaa
     4621 tgaatctata tgcaggggcg gcggtttgtc aatatcttct gtgctgcatc atcaaaccgt
     4681 cgattggaaa agtgctgccc tgccgctgca ctttttcaga cgaccttaaa ccgtttctat
     4741 taaaatagcg cattccactt ttcagacggc atccttatgt ttcccgacca atccgccccc
     4801 aacctgctgc aaggcttgaa tcccgaacaa ctctccgccg taacctggcc gccgcaatcc
     4861 gcccttgtgc tggcgggcgc gggcagcggc aaaacgcgcg tgctgaccac gcgcatcgca
     4921 tggctgttgc aaaccggtca ggcaagcgtg cacagcatta tggcggtaac gtttaccaac
     4981 aaagccgcca aagaaatgca aacccgactc ggcgcgatga ttcccatcaa cgtccgcgcc
     5041 atgtggctcg gcacgttcca cggtctctgc caccgctttt tgcgcctgca ccaccgcgac
     5101 gccggtctgc cgtcttcctt tcaaatcctc gacggcggcg accagctttc cctcatcaaa
     5161 cgcctgctca aaagcctcaa catcgccgaa gaaatcatcg cgccgcgttc gctgcaaggc
     5221 tttatcaacg cgcaaaaaga atccggcttg cgcgcttccg tcttgagcgc gcccgacccg
     5281 cacacaagcc gcatgatcga atgctacgcc gaatacgaca aaatctgcca acgcgaaggc
     5341 gtggtcgatt ttgccgaact catgctccgc agctacgaaa tgctgcaaag caacgaaatc
     5401 ctgcgccaac actaccaaaa ccgcttcaat cacattctgg tcgacgaatt ccaagacacc
     5461 aacaaactgc aatacgcctg gctcaaactc atggcgggcg gcaacgcggc ggtatttgcc
     5521 gtcggcgacg acgaccaaag catctaccgt ttccgtggcg caaacgttgg caatatgacc
     5581 gcgctgatgg aagaattcca catcgacgcg cccgtcaaac tcgaacaaaa ctaccgctcc
     5641 gtcggcaaca tccttgccgc cgccaatgcc gttatcgaaa acaacgacga acgactcggc
     5701 aaaaacctgc gcaccgacgc cgaagcaggc gacaaaattc gctactactc cgcctttacc
     5761 gacctcgaag aagcccggtt catcgtggac gaaaccaaag ccctcgaacg cgaaggctgg
     5821 gatttggacg aaatcgccgt cctctaccgt agcaacgccc aatcccgcgt tatcgaacaa
     5881 agcctgttcc gcagcggcat cccctacaaa atctacggcg gcttgcgctt ttacgaacgc
     5941 caagaaatca aacacgccct cgcctacctg cgcctcgccg tcaatcccga cgacgacaac
     6001 gccctcttgc gtgtcatcaa cttcccaccg cgcggcatcg gtgcacgtac cgtcgaaaat
     6061 cttcagacgg cctcaaacga acaaggcatc accctctggc aagccgcctg caacgccggc
     6121 gcgaaagccg ccaaagtcgt cgccttcgtc cgcctgattg aagccctgcg caaccaagtc
     6181 ggacaaatgc ccctgtccga aatcatcgtc ggcatcctca aagacagtgg cttgaccgaa
     6241 cactaccgca cccaaaaagg cgacaaccaa gaccgcctcg acaaccttga cgaactcgtc
     6301 aacgccgcca tcgagttcaa accagaagac agcaactttg aaaccctgcc tgaaaacatt
     6361 tcagacgatc ccgccttccc catcctcgct ttcttgagca acgccaccct cgaatccggc
     6421 gaaaatcaag caggtgcagg cgaaaaagcc gtccaactca tgaccgtcca cgccgccaaa
     6481 ggcttggaat ttaacgccgt cttcctcacc ggcatggaag aaggccgctt ccccagcgaa
     6541 atgagtctcg ccgaacgcgg cggcctcgaa gaagaacgcc gcctcatgta cgtcgccatc
     6601 acccgcgccc gcaaacgcct ctacatcacc atggcgcaac aacgcatgct gcacggacaa
     6661 acccaattcg gcatcgtctc ccgcttcgtc gaagagatcc cacccgaagt attgcactac
     6721 ctgtccgtca aaaagaccgc ctacgacagc tacggcagcc cgcgccaaac cgccgcatcc
     6781 aaagacaaaa tcatcgacga ctacaaacag ccccaaacct acgcaggctt ccgtatcgga
     6841 caaaacgtcc gccacgccaa attcggcacc ggcgtgatta tcgatgccgc agataaaggc
     6901 gaatccgccc gactgaccat caacttcggc aaacagggcg tgaaagagtt ggataccaag
     6961 tttgcgaaat tggaagcgat gtaaatttga aatgcaggct ggatactcgt atccgacaaa
     7021 aatatttgac gcgtctatcg tttccgaaaa accgctgttg gaaaatgtcg gattcgagaa
     7081 tccgacctat ggcaaaaaac tgtagcaagg acaaggcaaa aggccgtctg aatccggtaa
     7141 caacaaattt tgccgaaacc tccgccgtca ttcccgcgca ggcgggaatc cagacctttc
     7201 ggcacgggaa cttatcggat aaaaggtttc tttagattcc acgttctaga ttcccgcctg
     7261 cgcgggaatg acggacggta aaagccgggt atagatacct aacccttgtt tatagctgaa
     7321 aatcaataag gaagaacatt atgtcccaag tttttaaaga ttttgatttg tcctccgtat
     7381 gggaatccga cagttgggca gatgaaaact acaaagaagc cccgtttacc cctgaaattt
     7441 tggctgccgt agaaagtgaa ctgggctata aattgccgca aagttttatt gaattgatgg
     7501 cggtacaaaa cggcggaata tttgtcaaaa actgttttcc gaccacacag agaaattcgt
     7561 gggcgaaaga tcatgtgcaa atttgcgagg tatcgggcat cggctttgaa aaagaaggga
     7621 gtttgtgcgg cgaaacaggg caaaaacttt ggatggaaga atgggaatat ccgcccatcg
     7681 gcgtgtattt tgccaacgac ccgtcaggcg gtcatgccat gtttgccttg gactatcggg
     7741 agtgtggaaa agacggcgag ccgaaagtgg tgtttgtcga gcaagaatcg gattttgaaa
     7801 tcgtcgaact tgcccccgat tttgaaacct ttatccgcag cttgcggcat gaagatgagt
     7861 ttattgacga ggaaatataa aacggcggtt gaaaaaccgg aatcatcaag ggaaaacggg
     7921 cgaaataacg gataatcgct tgaatccgta aggaaaacgg tttggtggaa cgcgccatcc
     7981 aagacctttg caaagaaaaa ctgtctccga cagcattgac attattaaca gaacttatca
     8041 agtttggagc tatctcaaat ataattcggt tatccttttg tatccattaa atcatatgct
     8101 tcaattaatt gttgttctag ctcttgtacc aattttgaat tgcgaattcc tgacacaatc
     8161 tcaaattctt ctgcatctat gcaaacacct gcataaattt caataacaag ggaacgcaat
     8221 aattgaagct cttctcttgt taaagaaata ataatgtcat cacctgtgta attgattata
     8281 ttcataataa ttttattttt gtttgtcaaa gtaagttttg cctaaggttg gtctaaatgc
     8341 agttccacca tcttttgaat ttgggtctct gattacaatt gctccagact tatcatccca
     8401 aattgctctt atgtgtttgg attgtaatct tcgaattccc aagaaaaaaa tcgtaataag
     8461 tttgaaagtg tcaaatccca agtttctttt gagcaatatt ctaatatttt atcaatttca
     8521 cttttaataa tcttatgatc aaactgttct aatattaatg cattagacca aaaaaaacct
     8581 tctttattac aatgatggga aatccattta ggagaacaaa tgcaaagtga aaaaatagat
     8641 gagccttgtt ctccttcgat tccgatatcc aaatctatcc atctatggaa attatctgga
     8701 atttcggggg taaatttttc aaaatcaata tcatataaat ttatgctttt taaatccaat
     8761 ttaatcatta gggctgtcct agataaatag ggaaattcaa attaagttag aattatccct
     8821 atgagaaaaa gtcgtctaag ccggtataaa caaaataaac tcattgagct atttgtcgca
     8881 ggtgtaactg caagaacagc aacagagcct gacagcattg tttatacgga ttgttatcgt
     8941 agctatgatg tattagatgt gagcgaattt agccatttcc gtatcaatca cagcacacat
     9001 tttgctgaac gacaaaacca tatcaatgga attgagaatt tttggaaccg ggcaaaacgt
     9061 catttacgca agtttaacgg cattcccaaa gcgcattttg agctgtattt aaaggagtgc
     9121 gaatggcgtt ttaacaacag tgagataaaa gttcaaattt ccattttaaa acaattagta
     9181 aaatcgagtt tatcttagtt gtccaggaca gccccattat ttttataaca ccgtgaagcc
     9241 gcacagcagt ttgaacagtg atacgccgtt tgcgggctta cgagtttatt ttcccggcct
     9301 gcagtttgag caatacggtg atttcctacg gttaatacaa atgtttacac attgatacat
     9361 ttcatttata gttccgccta tttgaaaata gaaaatatga attcgaccgc aagtaaaacc
     9421 ctgaaaggat tgtcgctggt gtttttcgcc tctggattct gcgccctgat ttaccaggtc
     9481 agctggcaga ggcttctatt cagtcacata ggtatcgatt tgagttcgat tactgtcatt
     9541 atttctgtat ttatggtcgg cttgggtgta ggtgcgtatt tcggtggacg cattgctgac
     9601 cgttttcctt caagtatcat ccccctgttt tgcatcgctg aagtatccat cggtctgttc
     9661 ggtttggtaa gcaggggtct gatttccggc ttggggcatc ttttagttga ggctgatttg
     9721 cccatcatcg ctgctgccaa tttcctctta ttgctgcttc ctacctttat gatgggcgcg
     9781 accttgccct tgctgacctg tttttttaac cggaaaatac ataatgttgg cgagtctatc
     9841 ggtaccttat attttttcaa cactttgggt gcggcactcg gatcgcttgc cgccgccgaa
     9901 tttttctacg tcttttttac cctctcccaa accattgcgc tgacagcctg ctttaacctt
     9961 ctgattgctg cttcagtatg gctgcgttac agaaaggatg gatatagtga acactaaacc
    10021 gaatactagt ttgatttata tgctttcttt ccttagcggc ttattgagct tgggtataga
    10081 agtcttgtgg gtaaggatgt tttcgttcgc agcacagtcc gtgcctcagg cattttcatt
    10141 tactcttgcc tgttttctga ccggtatcgc cgtcggcgcg tattttggca aacggatttg
    10201 ccgcagccgc tttgttgata ttccctttat cgggcagtgc ttcttgtggg cgggtattgc
    10261 cgactttttg attttgggtg ctgcgtggtt gttgacgggt ttttccggct tcgtccacca
    10321 cgccggtatc ttcattaccc tgtctgccgt cgtcagaggg ttgattttcc cgctcgtaca
    10381 ccatgtgggt acggatggca acaaatccgg acgacaggtt tccaatgttt atttcgccaa
    10441 cgttgccggc agtgcattgg gtccggtcct tatcggcttt gtgatacttg atttcttgtc
    10501 cacccaacag atttacctgc tcatctgttt gatttctgct gctgtccctt tgttttgtac
    10561 actgttccaa aaaagtctcc gactgaatgc agtgtcgata gcagtttccc taatgttcgg
    10621 catcctcatg ttcctactgc cggattctgt ctttcaaaat attgctgacc gtccggatag
    10681 gctgattgaa aacaaacacg gcattgttgc ggtttaccat agagatggtg ataaggttgt
    10741 ttatggggcg aatgtatacg acggcgcata caataccgat gtattcaata gtgtcaacgg
    10801 catcgaacgt gcctatctgc taccctccct gaagtctggc atacgccgca ttttcgtcgt
    10861 tggattgagt acaggttcgt gggcgcgcgt cttgtctgcc attccggaaa tgcagtcgat
    10921 gattgttgcg gaaatcaatc cggcataccg tagccttatc gcggacgagc cgcaaatcgc
    10981 cccgcttttg caggacaaac gtgttgaaat tgtattggat gacggtagga aatggctgcg
    11041 tcgccatcct gatgaaaaat tcgacctgat tttgatgaat acgacttggt actggcgtgc
    11101 ctattccacc aacctgttga gtgcggaatt tttaaaacag gtgcaaagcc accttacccc
    11161 ggatggtatt gtaatgttta ataccacgca cagcccgcat gcttttgcta ccgccgtaca
    11221 cagtattccc tatgcatacc gctatgggca tatggtagtc ggctcggcaa ccccggtagt
    11281 tttccctaat aaagaactgc tcaagcaacg tctctcccgg ttgatttggc cggaaagcgg
    11341 caggcacgta tttgacagca gcaccgtgga tgctgcagca caaaaggttg tctctcgtat
    11401 gctgattcag atgacggaac cttcggctgg ggcggaagtc attaccgacg ataatatgat
    11461 tgtagaatac aaatacggca gagggattta accgtcttaa agggtttcag gcaacgcagg
    11521 ttttaggtaa cgtcctgcta gttcaaaaaa accgcatcac agcagtcggg acaaaatggt
    11581 ttaaacattt tgtcccgaat tcttattcct atatatagtg gattaacaaa aatcaggaca
    11641 aggcgacgaa gccgcagaca gtac
//
LOCUS       DAWEYF010000055        11556 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.055, whole genome shotgun sequence.
ACCESSION   DAWEYF010000055 DAWEYF010000000
VERSION     DAWEYF010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11556
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.055"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(259..374)
                     /locus_tag="WGN93_001020"
                     /pseudo
     CDS             complement(259..374)
                     /locus_tag="WGN93_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            590..1891
                     /gene="bioA"
                     /locus_tag="WGN93_001021"
     CDS             590..1891
                     /gene="bioA"
                     /locus_tag="WGN93_001021"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ0226937.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPKSRFDDEWDGADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLHDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMAHFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGLLTELADKTVHILKEHNK"
     gene            1888..2535
                     /gene="bioD"
                     /locus_tag="WGN93_001022"
     CDS             1888..2535
                     /gene="bioD"
                     /locus_tag="WGN93_001022"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ0226938.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGVLAKQLLQQGKSVITQKLVQTGC
                     QNIADDIAVHRKIMGIPMQEADKQGLTMPEIFSYPASPHLAARLDGRDLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLVFNHIHDSRDAHIAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2550..2732
                     /locus_tag="WGN93_001023"
     CDS             2550..2732
                     /locus_tag="WGN93_001023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226939.1"
                     /translation="MEHLYDEYGNTTPNRRTTNKKDETISSKVTVAAIPVAAPFAIAD
                     IVDQDFIQAIMKITGH"
     gene            2756..3142
                     /locus_tag="WGN93_001024"
     CDS             2756..3142
                     /locus_tag="WGN93_001024"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226940.1"
                     /translation="MKCYIKVVIIVFIMVMTTSCNPCFFATSSCDYSFRKNYPINSDD
                     EYYVKNNTSKETRIADLRYCISYACPEVYQKYQLPDENGDYREIIRRKYKDDYKKGYK
                     NADDVMTCYGKIGECMKNNKGYSTKW"
     gene            3136..3579
                     /locus_tag="WGN93_001025"
     CDS             3136..3579
                     /locus_tag="WGN93_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226941.1"
                     /translation="MVMFRLLSTALVLLIMQGCYYTTIDNEKCFVAPQSVHCPVSSDI
                     ENVIRKNPNKSINQVRSDIKYCANMYFSNIRELNIPQDFDNYIFMLKEKGIPRNDKEL
                     AYNAVRNMHIICLSSLGGYDYYQKTAEFQKIDYKKEMEKLLNENH"
     gene            4037..4513
                     /locus_tag="WGN93_001026"
     CDS             4037..4513
                     /locus_tag="WGN93_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ0226942.1"
                     /translation="MGYGFEEWLPDLPAPVSDGISLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            4543..5433
                     /gene="ubiA"
                     /locus_tag="WGN93_001027"
     CDS             4543..5433
                     /gene="ubiA"
                     /locus_tag="WGN93_001027"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ0226943.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVLPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGATWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            5618..6067
                     /gene="ptsN"
                     /locus_tag="WGN93_001028"
     CDS             5618..6067
                     /gene="ptsN"
                     /locus_tag="WGN93_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ0226944.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            6069..7031
                     /locus_tag="WGN93_001029"
     CDS             6069..7031
                     /locus_tag="WGN93_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ0226945.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            7012..7866
                     /gene="rapZ"
                     /locus_tag="WGN93_001030"
     CDS             7012..7866
                     /gene="rapZ"
                     /locus_tag="WGN93_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ0226946.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIAYLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPKLRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            7947..8888
                     /gene="ylqF"
                     /locus_tag="WGN93_001031"
     CDS             7947..8888
                     /gene="ylqF"
                     /locus_tag="WGN93_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ0226947.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGSVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            8989..9591
                     /locus_tag="WGN93_001032"
     CDS             8989..9591
                     /locus_tag="WGN93_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ0226948.1"
                     /translation="MTDKISPDALIEAALLTQTEPLNEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVIQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPTTVPSDTLPN"
     gene            9775..11448
                     /gene="recN"
                     /locus_tag="WGN93_001033"
     CDS             9775..11448
                     /gene="recN"
                     /locus_tag="WGN93_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ0226949.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPTLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         3008 a         2726 c         2987 g         2835 t
ORIGIN      
        1 ggctgtaacc ttcaatcgga atttgttgcc tgcgggatat gcggtatgaa tgtttgggat
       61 atatggggca ggatggtgga aatctatcat aagtataaga agccgtgcct ggttttggcg
      121 gtggattttg tgatgggtat ggtattcata gagccgaatg aggagccgtg catcggcaga
      181 tgctatgcgc caatgtcgga gtcccctgat tttgccaacg ctgttgctat gatctgtatc
      241 gtatggattg ccgttttata gtggattaaa tttaaaccag tacggcgtta cctcgccttg
      301 ccgtactatt tgtactgtct gcggcttcgt ctccttgtcc tgatttttgt taatccacta
      361 tatctatgac tgattgaagc gttgggcgga ggctgtgtga aacggtattg ggcgttgggt
      421 cgtctgattc caatcaggct tgaggaatgc gaaacggtgt gcgcttatgc tgaggacgat
      481 ttgtttcgcg gttttgcgcc cgaaacggat ggaaaggtgt gggaagcggt ctgtcggagt
      541 agaatacgcg tttgcgtttg aatacagtaa gaagaaaaga gagaaactta tgccgtctga
      601 acatcaacac acatcatcat tgcttgattt cgaccgtacc catctgcttc atccctatac
      661 ttccatgacc gatccgctgc ccgtttatcc tgtcaaacgt gcagaagggg tgtttatcga
      721 attggcggac ggcacgcggt tgattgacgg gatgtcgtct tggtggtgtg cgatacacgg
      781 ctacaatcat cctgttttga atcaagcggt tgagacgcag atgaaacaga tgtcgcatgt
      841 gatgttcggc ggtttgacgc acgaaccggc agtggagctg ggcaaattat tggttgggat
      901 tttgccgcag ggactggacc gtatttttta tgcggattcg ggttcggttt cggtagaagt
      961 cgcgctgaag atggcggtgc aataccagca ggcgcggggt ttgaccgcga agcagaatat
     1021 tgcgacggta cggcgcgggt atcacggcga tacttggaac gcgatgtccg tctgcgatcc
     1081 ggaaacgggg atgcaccata ttttcggcag cgcgttgccg cagcgttatt ttgtcgataa
     1141 tccgaaaagc cgtttcgacg atgaatggga cggggcggat ttgcagcctg tccgcgcctt
     1201 gtttgaagtg catcatgcgg atattgccgc ctttatttta gagccggtcg tgcagggcgc
     1261 gggcggcatg tatttttatc atccgcagta tcttcgcgga ttgcacgatt tgtgcgacga
     1321 gtttgatatc gttttgattt ttgatgaaat cgccaccgga ttcgggcgca cgggcaagat
     1381 gtttgcctgc gaacacgcgg aggtcgtgcc ggatattatg tgcatcggca agggtttgag
     1441 cggcggctat atgacgctgg cggcggcaat cacttcgcaa aaagttaccg aaacgatttc
     1501 gcgcggcgag gcgggcgtgt ttatgcacgg accgacattt atggcaaacc cactggcgtg
     1561 tgccgttgcc tgcgcttcgg tcaaactgct tttgtctcaa gactggcagg caaatatccg
     1621 ccgcattgaa agcatcttaa aaggccgtct gaaagccgcg tgggacattc gcggcgtgaa
     1681 agacgtacgc gttttgggtg ccatcggcgt gatcgagctg gataaaggcg tagatatggc
     1741 gcattttcaa gcggattgcg tggcgcaggg tatttgggtg cgccccttcg gcaggctggt
     1801 gtacctcatg ccgccttaca ttatttcaga cggcctcttg accgaacttg ccgataaaac
     1861 tgtacacatt ttgaaggaac acaacaaatg aaaggcgttt acttcgtcag cggcattgat
     1921 acggacatcg gcaaaaccgt cgccaccggc gtattggcaa aacaattgtt gcagcaaggc
     1981 aaaagtgtga ttacgcaaaa gctcgtgcaa accggttgcc aaaatatcgc cgacgacatc
     2041 gccgtccacc gcaaaatcat gggcataccc atgcaggaag ccgacaaaca agggttgacc
     2101 atgcccgaaa tcttcagcta tcccgcctcg ccccaccttg ccgcccgtct ggatggcagg
     2161 gatttggact tggacaaaat ccgtaccgcc acacaagaat tggcggcgca gtacgaagtc
     2221 gttttggtcg aaggcgcggg cggattgatg gttccgctga cggaaaacct gttaaccatt
     2281 gattatatcc gtcagcaagg ctatcccgtc atcctcgtta ccagcggacg gctcggcagc
     2341 atcaaccaca ccctgctcag tttcgccgcg ctcaaacaat acggcattcg cttgcacagc
     2401 ctcgtgttca accacatcca cgacagccgc gacgcacaca tcgcccaaga cagcctgagc
     2461 tacttgaaat gccgtctgaa agccgatttt tccgaagcgg aatggatgga gttggcaaaa
     2521 acagacgcgg tataaagatt gggaaaaata tggaacacct atatgatgaa tatggaaata
     2581 caacgccaaa tagaagaaca acaaataaaa aagatgaaac tatttcaagt aaagtaactg
     2641 ttgcagcgat accagtagcc gctccatttg ctattgctga tatagtcgat caggatttta
     2701 tccaagcgat tatgaaaatt actggtcatt gattatctat atattggtgg ttgttatgaa
     2761 atgctatatt aaagttgtca ttattgtttt tataatggta atgacaactt cttgtaatcc
     2821 ttgctttttt gcaacttctt cttgtgatta ttcttttaga aaaaactatc ctataaatag
     2881 cgacgatgaa tattatgtta agaataatac gagcaaagaa acaagaattg cggatttacg
     2941 ctattgtatt tcttatgcat gtccagaagt ttatcaaaaa tatcaactac cagatgaaaa
     3001 tggagattat agggagatta ttcgtagaaa atataaagat gattataaaa agggctataa
     3061 gaatgcagat gatgtcatga catgctacgg aaagattgga gaatgcatga aaaataataa
     3121 aggatattca acaaaatggt aatgttccgc ttattatcaa cagcccttgt attgttgata
     3181 atgcagggct gttattacac aactattgat aatgaaaaat gctttgttgc cccacaaagc
     3241 gttcattgtc ctgtaagttc tgatattgaa aatgttatta gaaaaaatcc taataaaagc
     3301 ataaatcaag ttaggagtga tattaaatat tgtgctaata tgtatttttc caatatacgg
     3361 gaattaaata ttccgcaaga ttttgataat tacattttca tgcttaaaga aaaaggtatt
     3421 ccaagaaatg ataaggaatt ggcttataat gcagttagaa atatgcacat tatttgtttg
     3481 agttctttgg gtggttatga ttattatcaa aaaaccgcag aatttcagaa aatagattat
     3541 aaaaaagaaa tggagaaatt gttaaatgaa aaccattaaa tttgctattg ccgatatagt
     3601 tgatagcgac tttatccaag tgattatgaa attaagcggg cattgattta tgattacgcg
     3661 ttgttttaaa gttgtcatta attgttttta taatggtaat gacaacttct tgtaatcctt
     3721 gattttttgc aacttcgtct tgtaattatc cttttgatga tatgacgata agagcaaaca
     3781 acgatattga atattttgtt aaaaataata cgactaacga acaacgaatt gatgatttca
     3841 gaagttgcct ttccgttgct tgtcctgaaa tatataaatt atatcaatta cctgatgaaa
     3901 agggtaatta tcaatatatt ataaaaaaat attatgataa taaatacaat gataatgcag
     3961 tcaaatcgac aaattgtatt ggggataatg caagatgtat gcttaataat aaaggatatt
     4021 caacaaaatg gtaataatgg gttacggctt tgaggaatgg ctgcccgacc tgcccgcccc
     4081 tgtttcagac ggcatcagcc tgccgatgag ccggttattg aaagcccggt cgctgaccgc
     4141 cgcattgcgc gccttgccgc atacattttc ggtggaactg ctgaaactgg gcgaattgga
     4201 gacggaatgc ggagggaggc tggtgcgcga agttttgttg aagctggacg gtatccctgt
     4261 tgtcgcggca aggagcgagt gccggatagg ttcggcgttt tggcaaaaca ttttggactg
     4321 cggcacgcgt cctttgggcg agcgtctgtt tcaagccgat ttggaagggg cgcgttcggc
     4381 gtttgagttt gccgtttccg gcgaaggatg cggacggtac tttgccgcgc ggcgttctcg
     4441 gttttcccgt cacggcgagg aaatgctgct gaccgagtat tttctgcccg aactgaaacg
     4501 ctttatcgga taaaataccg ttttttcaag ctgtgcggca atatgaatcc taaatcccct
     4561 ttatttttac gactgtccga tcgtttggat gtgtacctgc gcctgatgcg ggcggacaag
     4621 cccattggga cgctgctttt gctgtggccg acctactggg cattgtggct ggcttcagac
     4681 ggcattcccg atttggcggt attggcggcg tttacaatcg gcacgttttt aatgcggagt
     4741 gccggttgcg tcatcaacga ttttgccgac cgcgattttg acggtgctgt cgagcgcacc
     4801 aaaaaccgtc cgttcgcaca gggtcgggtc ggaaaaaaag aagcgctgct gctgacggca
     4861 tttttgtgcc tgcttgccgc attgtgcctg attccgctga atcatctgac atggctgatg
     4921 agcctgcccg cgctgtttct tgcgctgact tacccgttta ccaaacgctt ttttccgatt
     4981 ccccaactct atctcgggct tgccttttcc ttcggtatcc cgatggcgtt tgccgccgtt
     5041 gccggaaacg tgctgcctca agcgtggata ctctttgccg ccaatgtgtt atggactctg
     5101 gcgtatgaca cggtttatgc aatggcggac aaagaagacg atttgaaaat cggcatcaaa
     5161 acctccgccg tcacgttcgg gcgttacgac atcgccgccg ttatgctgtg tcacggaggc
     5221 tttaccctgc tgatggcagt attgggtgcg gttatcggtg cgacatgggc atattggacg
     5281 gcaatcccca tcgtcctgct gctgcaatac cgccaatatg ccgccatcaa aagccgcgtc
     5341 cggcaaatct gttttgaaac gtttttggca aacaacagaa ttggttgggt gtggtttacc
     5401 gccatttttg cccatacgtt tttcgcgaaa taaggcaggg caatgccgtc tgaagagccg
     5461 taaactgctt tggacggcat ttctatctgt gccgaaaagc gttaaaatat gtttttaaaa
     5521 cgctgtgtta tgtcagcccg tgccgtatgc gggattgaga tttgccccgg cagtcggtac
     5581 aatctttctg ttttgcgatg tctgaaaaga gaagcttatg agccttatcg gcgaaatttt
     5641 gcctttgtcc catattgttt tggatatgga ggtgggcagt aaaaaaaggc tgtttgagga
     5701 agcgggcctg cttttggaac gcgaatcctc attgtcccat gctgatgttt tcgaatgtct
     5761 ttttgcccgt gaaaaactcg gttcgaccgg tttggggcag ggcgttgcca tcccgcacgg
     5821 ccgtcatgcc ggcgtgaagc aggcgacggg cgcgttcatc cgcacgcgcg aacccgtcgg
     5881 atttgacgca ccggacggca aaccggtttc cctggttttt atcttgctgg ttccggaaaa
     5941 tgcgacggga gagcatttgg aagtattgtc caaactggcc ggcaagtttt cccaaaaaag
     6001 catcagagaa tcgctgatga ccgtttcttc tgcggaagaa gcccgcgcca tcctgactga
     6061 agaataatat gcccagtatc tctgtccgcc ggctgtttga cgacaaccaa tacaaactgc
     6121 aacttgcctg ggccgccggc aattcgggtg cggacaaccg tatcggcgta gaggcggaca
     6181 agcccgtcct cgccttggtc ggacacctga atttcatcca ccccaaccaa atccaagtgg
     6241 tcggtttggc ggagtcggaa tatctgaacc gtctcgaatc gggggaaacg ggttatcagt
     6301 tcggagacct gttcgacatt tctatgtctt tggtcattgt ggcaaacggc ttgccggttt
     6361 ccccgggtct gcgcgactat tgccataaaa acgatattcc actgctgact tccaaactcg
     6421 aaagccccta tctgatggat gtgttgcgga tttacctgca acgcaccctg gcggcatcgt
     6481 ccgtcaaaca cggcgtattt ctcgatgtgt ttgaaatcgg cgtgctgatt accgggcatt
     6541 ccggcctggg taagagcgaa ttggcattgg aactgatttc gcgcggccac agcctgattg
     6601 ccgacgatgc ggtcgagctg ttccgcatcg gcccggaaac gctggaaggg cgttgttcgc
     6661 ctatgctgcg cgattttttg gaagtgcgcg gcttggggat actcaatatc cgccatattt
     6721 tcggcgaaac ttccatccgc cccaaaaaaa tcctgcaact cattatcaat ttagtcgagg
     6781 cggacgacga gtatatgaag cagctcgacc gtttgagtat ccgtaccgaa accgaatcca
     6841 tcctcaacgt caacgtccgt tcggtaacgc tgcctgtcgc ggtcggacgc aaccttgccg
     6901 tattggttga agcggcggtg cgcaattata ttcttcagtt gcgcggtaag gacagtacgc
     6961 gcgaattttt ggaacgccat cagacacaac ttaaagaaaa cgaacagaat catgaaaatc
     7021 gtcctgatta gcgggttgtc cggttcgggc aaatccgtcg cactgcgcca aatggaagat
     7081 tcgggttatt tctgcgtgga caatttgcct ttggaaatgt tgcccgcgct ggtgtcgtat
     7141 catatcgagc gtgcggacga aactgaattg gcggtcagcg tcgatgtgcg ttccggcatc
     7201 gacatcggac aggcgcggga acagattgcc tatctgcgcg gactggggca cagggttgaa
     7261 gttttgtttg tcgaggcgga agaaagcgtg ttggtccgcc ggttttccga aaccaggcga
     7321 ggccaccctc tgagtaatca ggatatgacc ttgttggaaa gcttaaagaa agaacgggaa
     7381 tggctgttcc cgcttaaaga aatcgcctat tgtatcgaca cttccaagat gaatgcccaa
     7441 cagctccgcc atgcagtccg gcagtggctg aaggtcgaac gtaccgggct gctggtgatt
     7501 ttggagtcct tcgggttcaa atacggcgtg ccgaacaacg ccgattttat gttcgatatg
     7561 cgcagcctgc ccaacccgta ttacgatccc aagttgaggc cttacaccgg tatggacaag
     7621 cccgtttggg attatttgga cggacagccg cttgtgcagg aaatggttga cgacatcgaa
     7681 aggtttgtta cgcattggtt accgcgtttg gaggatgaaa gcaggagcta cgttaccgtc
     7741 gccatcggtt gcacgggagg acagcaccgt tcggtctata ttgtcgaaaa actcgcccga
     7801 aggttgaaag ggcgttatga attgctgata cggcacagac aggcgcaaaa cctgtcagac
     7861 cgctaattcc gtcaaaccat tatgccgtct gaaaccccgt cctccgtttc agacggcatt
     7921 tcaaatattg aaaagaaaga acagacatgg caatccaatg gtttcccggc catatgaaca
     7981 aggcgaaaaa agccatcgcc gagcgtgcaa aaagcgttga tatggtgatt gaaatgctgg
     8041 acgcgcgtat gcccgcctcc agcgaaaacc ccctgcttgc ccagctttcc aaaggcaaac
     8101 ccaaacttaa aatcctaaac aaacaagatc ttgccgaccc cgaacgcaca aaggtctggc
     8161 ttgaccacta caacagccgc cccgacacgc gcgccatcgc cctcgattcc tccgaaaccg
     8221 gcgcacacgg caaaatcacc caagcctgcc gcgcgatgat tccccaccgg caaggcatag
     8281 acaaacccct gcgcgttttg atttgcggca ttcccaacgt cggcaaatcc accctcatca
     8341 acggcatgat aggcaaaaaa tccgccaaaa ccggcaacga acccggcatc accaaagccg
     8401 aacaacgcct tttccttgcc gacgacttct ggctgtacga cacccccgga atgctgtggc
     8461 cgaaaatcat tgtcgaagaa agcggctaca acctcgccgc cggcggttca gtcggacgca
     8521 acgcattgga cgaagaagaa gtcgccctcg aacttttaga ctacctccgc cgccactacc
     8581 tccctatgtt gcaagaacgc taccaagccg acaaagaccc cagcagccac tgggacgaaa
     8641 acgtttggct cgaatggata gccaaaaaac gcggcgcagt cctcagcggc ggacggatca
     8701 actaccaaaa agccgccgaa aacatcctca ccgacttccg tgaaggcaaa atcggcagaa
     8761 tcaccctcga aacgccgaac caatgggaaa cttggctcaa aaaagcccgt cagaaagaag
     8821 ccgaactcaa agccatacgc gaagccagaa aagcagagcg taaagggcag aagccttcgg
     8881 aagcataaag aatgccgtct gaaaaatatt tttcaggcag cttctctcta ctacaaccga
     8941 tttcagacgg catatccaaa cccatgccgt ttcagcacgg atacccgtat gaccgacaaa
     9001 atttctcccg acgcgctgat tgaagccgca ctgctgaccc aaaccgaacc gctgaacgaa
     9061 aaatctatgc gcgaattgtg tgtgccgccg ttgtcgcaag acaaactgat tgatgtgttg
     9121 gcgcagttga aaacgcgttg gcaggatagg gcgttgcaac tggtgcatac gcaagagggc
     9181 tggcgttttc agattgttca gacggcattc gagcggctgg gcagcctgca agaacagcgt
     9241 gcgccgcgct actcccgcgc cgtgatggaa acactggcga ttatcgccta ccagcagccc
     9301 gtaacgcgcg gcgacatcga aggcatacgc ggtgtggcgg tgtctcagaa cgtgatccag
     9361 accttgcagg atcgggggtg gattgaagtc atcggacatc gggacacatt gggaaaaccc
     9421 gcattgtggg caacaacggc aacgtttctc agcgatttgc gcttggacgg tctagaagaa
     9481 cttcctccgc tgaccgaact gggcgaactg gttttgcccg atttaatgga aatgccgcct
     9541 acggatgaag aagagccgac aaccgtacca tccgataccc tgcccaactg aaattccaaa
     9601 tgccgtctga aacgcacatt gcttcagacg gcattgcaac aaataagcag ataaaaacaa
     9661 gcactaagaa aaattaagga aaaacttatt tttaatttaa aaaatcttag ttataattcg
     9721 tatatctaaa gttgatattg cttttgtcgg tagaattgct aaggaatcct cacgatgctt
     9781 ctaacacttt ctttgcgtga ttttgtcatt gttgaaaatc tgaatctgga ttttcaaagc
     9841 ggctttaccg tattgaccgg agaaactggc gcgggcaagt ccattacttt ggatgcgatt
     9901 ggtctgctgt tgggcgataa agccgattac agccaagtcc gcagcggcgc aaaagaagcg
     9961 cagttgtcgg cattgttcga tatttcccat ttgcctactt taaaagcaga attgtatgaa
    10021 caggggcttt taaacgacgg agaagaagaa ctcagtatcc gccgcattat cgatgccaaa
    10081 ggcaaaagcc gcagctttat caacaatcag gccgctacct tggcgcaact caaagccgtc
    10141 ggcagccagc ttatcgacat ccacgggcaa aacgcccatc attcgcttaa tcaggaagcc
    10201 gcccagcgcg aattgttgga cgcatttgcg ggcagcaggg cgcaggcgga aaccgtcagg
    10261 cagctttatc aaaactgggc aaactcaaaa aaagcattgc aggaagcgca ggaacaggca
    10321 gaaaacattg cactcgaaca agagcgtctg gaatggcagt ttaacgaatt gaatcagttg
    10381 gacattaaac aaggcgaatg ggaagccctc agccaaagcc acgacagcct tgcccattct
    10441 gccgagctgt tgcaggctgc cgaagaagtc ggaagcaaga ttgacggcga caacggcatc
    10501 caacgccata tctatcaatg tcaaaaacta ttggccaatc tgcaaaacat cgagccgcgc
    10561 tttgccgaga gcctgaatat gttggcaagc atcgaggccg aattgggcga aatcagtgcc
    10621 aatatgcgcg atgtggcagg acgcagcgac atcaacccca atgaattggc ggcacaggaa
    10681 cagcgtatgg gcgaactgat ggggatggcg cggaaatacc ggatcgagcc tgaagagttg
    10741 cctgccaagt tggcagaaat cgaagaacgc ctgcaaagcc tgcaagctgc cgccgatttg
    10801 gacgcgctcg agcataatgt tgcccacaat tttgccgaat atcaggaagc tgcccacatc
    10861 ctttctgcca tgcgccatca ggcggcagag cgtttgagcg gcgaaacgac cgagcatatg
    10921 caacaccttg ccatgaaagg tgcacgtttc gacatcgtcc tgttgccctc gtcgccgacg
    10981 gcacacggtt tggagcaggt tcaatttcaa gttgccgcca acaaaggcaa tccgccccgt
    11041 ccgctgaata aagttgcctc cggcggcgaa ttggcgcgta tcagccttgc cttacaggtt
    11101 gttgccagcc aatataccca agttcccacc ctgatttttg atgaggtcga taccggtatt
    11161 ggagggggag tggctgaaat ggtcggcaag gcattacgtg cgttgggcag aaaacatcag
    11221 gtgcttgccg ttacccatct tccgcaagtc gcatcctgcg gcgaaaacca ctggcgggtg
    11281 cgcaagcaca gcgagggaga gcaaaccgtc agcgaaatca gtatattgga tgaaatccaa
    11341 cgggtcgaag aggttgcccg tatgttgggc ggagaagtca ttaccgatac gacgcggcag
    11401 catgcggcag aattgctgca acttgcgtcg aaaaatagtt tattttaaaa tcaatcagtt
    11461 aaaaaataac taaaaataaa agtctaaaac aatagacaga actcagataa atccgtatta
    11521 tcacgctttc ttaatcactt gaacaagtga ttgtgc
//
LOCUS       DAWEYF010000056        11553 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.056, whole genome shotgun sequence.
ACCESSION   DAWEYF010000056 DAWEYF010000000
VERSION     DAWEYF010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11553
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.056"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..622)
                     /locus_tag="WGN93_001034"
     CDS             complement(<1..622)
                     /locus_tag="WGN93_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEZ0226950.1"
                     /translation="MSFSIALPLVYLFIGILIGKTPFRKIKGTFSVILSRWIIPFVIV
                     YNITTYRDGMQYVMLWMIISMGLIILIGKRVDKDPVWNLCLCYLNIGWLGLPIVATLF
                     GDEAAQVLISAYVGSSLFGNSVGVGLLLNNSNFISGLKKTLKSPPVVALVIGMFGIPL
                     GHFVADYFGEVYFFSKIAMGILGMVILGIWLAEIKLNLNDLKKSIKP"
     gene            complement(917..1222)
                     /gene="nuoK"
                     /locus_tag="WGN93_001035"
     CDS             complement(917..1222)
                     /gene="nuoK"
                     /locus_tag="WGN93_001035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ0226951.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLNKLKG"
     gene            complement(1219..1890)
                     /locus_tag="WGN93_001036"
     CDS             complement(1219..1890)
                     /locus_tag="WGN93_001036"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ0226952.1"
                     /translation="MTFSAILFYILATIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTINPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            complement(1902..2381)
                     /gene="nuoI"
                     /locus_tag="WGN93_001037"
     CDS             complement(1902..2381)
                     /gene="nuoI"
                     /locus_tag="WGN93_001037"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ0226953.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            complement(2462..3538)
                     /gene="nuoH"
                     /locus_tag="WGN93_001038"
     CDS             complement(2462..3538)
                     /gene="nuoH"
                     /locus_tag="WGN93_001038"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ0226954.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            complement(3541..5802)
                     /locus_tag="WGN93_001039"
     CDS             complement(3541..5802)
                     /locus_tag="WGN93_001039"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ0226955.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIIQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVHSAIKCIAKDGNQNQVGVWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGIKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLASSKEELFMPLLSQEAVHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLNVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQIAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            complement(6090..6527)
                     /locus_tag="WGN93_001040"
     CDS             complement(6090..6527)
                     /locus_tag="WGN93_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226956.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            complement(6527..7828)
                     /gene="nuoF"
                     /locus_tag="WGN93_001041"
     CDS             complement(6527..7828)
                     /gene="nuoF"
                     /locus_tag="WGN93_001041"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ0226957.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALAQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            complement(8218..8691)
                     /gene="nuoE"
                     /locus_tag="WGN93_001042"
     CDS             complement(8218..8691)
                     /gene="nuoE"
                     /locus_tag="WGN93_001042"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ0226958.1"
                     /translation="MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVAEYIGISPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQR
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            complement(8691..9947)
                     /gene="nuoD"
                     /locus_tag="WGN93_001043"
     CDS             complement(8691..9947)
                     /gene="nuoD"
                     /locus_tag="WGN93_001043"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ0226959.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKKQPYEVYGKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     YHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(9937..10530)
                     /locus_tag="WGN93_001044"
     CDS             complement(9937..10530)
                     /locus_tag="WGN93_001044"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ0226960.1"
                     /translation="MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRHILTDYGFVGHPFRKDFPISGY
                     VEMRYDEAQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(10543..11025)
                     /locus_tag="WGN93_001045"
     CDS             complement(10543..11025)
                     /locus_tag="WGN93_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ0226961.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(11016..11372)
                     /locus_tag="WGN93_001046"
     CDS             complement(11016..11372)
                     /locus_tag="WGN93_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ0226962.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
BASE COUNT         2899 a         3015 c         2816 g         2823 t
ORIGIN      
        1 acggtttaat acttttcttc aaatcattca aatttagttt tatctcagcc agccaaatac
       61 cgagtatcac catccccaat attcccattg ctattttcga gaaaaaataa acttccccaa
      121 aataatctgc tacaaaatgc cctagcggaa taccgaacat tcctattacc aatgcaacaa
      181 cgggagggga ttttaaagtc tttttcaatc cggatatgaa attactatta ttcaataaca
      241 acccgacccc gaccgaattt ccgaataaag aacttcccac gtatgccgaa ataagcactt
      301 gcgccgcctc atctccaaac aaggttgcaa ctatgggaag ccccaaccat ccgatgttca
      361 aatagcacaa acacaaattc caaacaggat ctttatcaac tcttttcccg attaggataa
      421 tcaaccccat cgaaataatc atccataaca taacatactg cataccatca cgatatgtcg
      481 ttatgttata gacaataaca aaagggataa tccatctgct caatattaca gaaaaagtgc
      541 ctttaatttt tctaaaaggg gttttcccaa tcaaaatgcc aataaacaga tataccaatg
      601 gaagagcaat tgaaaatgac ataatcactc tccactttct gaaattctaa aattttcaaa
      661 aacccattgt tttacccaat tacccgccat acagcccaat ggctgccaat gagcccttga
      721 aattgtaaac attctctttc actcatacta atccacaatt tatgcatata tgggcgtgtg
      781 gagaccaaag tgccttgata tggcaaacaa gagtttttac ctgtaactgt ttgattaagc
      841 taactcctgc tgcacctaat ccaacagcag caatatcaaa cattatctat ctcctttttt
      901 ctttaaaaat tccaaatcaa cctttaagtt tgttcaaatc ggcaacgttg attgtttgtc
      961 ggttgcggta caccaatacc ataatcgcca aaccgatggc agattcggca gcggcaacgg
     1021 tcagtacgaa gaatacgaaa atctgtccgg cggtatcgcc caaatgttgc gagaaggcga
     1081 taaagttgaa gttcaccgcc aaaagcatca gctcgatgga catcagcaag accagcacgt
     1141 ttttgcggtt cataaagatg cccatcgcgc tgataccgaa caggagcgcg cccaatacca
     1201 gataatgcgt caaggtaatc atgctttgcc ctccccttcc ggcttgagac cgtctgaaac
     1261 ttcgctttct tcggcagatt cgacttgcgg tttgaccgct tccattttca ccagacgcat
     1321 acggccttgg tcggcgcgta ctttaacctg gtcggcagga tccatgcgtt tcggattgat
     1381 ggttttacgg tgaaccagcg caatcgccgc caccataccc aacaacagca ataccgccgc
     1441 caattcaaac ggcaacagat agtcggtata aatacggctg cccaaatcgc ggatattgtt
     1501 gtaatcggca ggaatgtctt tcatcagacc aaatgcggca aggtcggttt tcgggttgac
     1561 cagaatcagg atcagcgcaa ccgccaacaa tgtgccgacc acaccggcaa caggcgcgtg
     1621 ccgccagaaa ccggcacgca tttcttcaat gtcgatgttc aacatcatca cgacgaacag
     1681 gaacaacacc atcacggcgc cgacgtaaac caccaccagc gtcacgccca aaaactcagc
     1741 ctgcatcagc atccaaagca tcgcgctcac gcagaaggtc agcaccagat gcaaagcggc
     1801 gtggacaggg tttttagcgg taacggtacg cagcgcgccg tataagacga tggtggcaag
     1861 gatatagaac agaatcgcgg aaaaagtcat tcgtctgctc cttaacggta cggcgcgtca
     1921 gcggctttgc gtttggcgat ttcggcttcg tatttgtcgc cgattgccaa gaggatcggc
     1981 ttggtcatgt gcaagtcgcc ttttttctcg ccgtggtatt caaaaatatg cgtttccaca
     2041 atcgcatcgg ttgggcaggc ctcttcgcag aagccgcaga agatgcactt ggtcaggtcg
     2101 atgtcgtaac gcttggtgcg gcgggtgccg tcttcgcgtt cttccgattc gatattgatc
     2161 gccattgccg gacacaccgc ctcgcacaac ttacacgcaa tgcagcgttc ctcaccgttc
     2221 ggataccgcc gctgcgcgtg caggccgcgg aaacgcacgg attgcggcgt tttctcttcg
     2281 ggaaaataaa tcgtgtcttt gcgggcgaaa aagtttttga gcgttacgcc catacctttt
     2341 accaattcgc caagcagaaa ggtttttact aagttagcca tattatgttc cctcaaaaca
     2401 gggatttcgt taggtattca aaatcgcttt gttcagacgg cctcaagatg ccgtctgaaa
     2461 cttatttcca caaattcagc ggtgaaatca tccacacgcc caaaaccacg atgtaggcga
     2521 agccgatcgg aatcagcact ttccagccca aacgcatgat ttggtcgtaa cggtagcgcg
     2581 ggaaggttgc acggatccac aggtaccagt acagaaccgc cgccattttc acgaacatcc
     2641 agaatgcgga aggcgtaccg ataaagcccc agctttgcgg gaacggagac aaccagccac
     2701 cgaggaacat caacgatgtc agcgcggcaa tcagaatcat gaaaatgtat tcggcaagga
     2761 agaacagcgc gaacgcgaag ccggaatatt cgacgtggtg accggcaacg atttcagact
     2821 caccctctgc cacgtcaaac ggcgcacggt tggtttcggc aacggcggaa atcagataaa
     2881 cgatgaagat ggggaagagc ggcagccagt tccacgagaa taccgaaccg ccggcaatac
     2941 ctttggcttg cgcggcaacg atgtcggaga agttcatact gcccgatacc atcacgacgc
     3001 acaccagcgc ggcactcatg gcgatttcgt aagaaatgct ttgcgcggag gcacgcattg
     3061 cgcccaggaa cgaatatttg gagttggaag cccagcccgc gatgatcacg ccgtaaaccg
     3121 acagcgaggt aatcatcagg atgtacaaaa ggccgatatt gatattggtc agcacccatt
     3181 cttcgttgaa cggaatcact gcccatgccg caaaagacgg ggcgagcgac ataatcgggc
     3241 cgatgtagaa cagggctttg tttgacaact tcggacgggt tacttcttta aacaagagtt
     3301 tgaacacgtc ggcaaacggc tgaatcagac cccacgggcc ggttacgttc gggccgacac
     3361 gaagctgcat aaagccgatg actttacgtt cgaaatacgt caggtaggca acggtcagaa
     3421 tcagcggaat caggataatc acaattttga cgatgacgga taccaccaag cctacggtaa
     3481 tacccaaatc gcccagaccg agcgttgcgg caaagaggtt ttggaaccat tcttgcatga
     3541 tcaagctccc gccagttcaa tagtgtccat caacgcaccc agcgcggcat tttcggtatg
     3601 cagcggcaga tgcaccacgt tttcaggcaa accggcatcg gctttgacgg caaccgatac
     3661 gcttgcgccg ttttgtttgg cgacagcaat ttgtccgtct tgcaggccca agcgtgccaa
     3721 agtgttcgga tttacacgcg cggcaggcac ggcggcatgg ctggtttctt gcaacggtgc
     3781 ggaacggcgc acgatagaat cagtgtgata aataccgacg ccgccgacac ggacaaggcg
     3841 gtctgaggcc gtctgaacgc cctcccctgt ccatgtgcta cggttgtcca gtttggacgg
     3901 caggctttct gcatccagcg cgtctttcag aatcgcagcg gtatcgtgat attcaaaacc
     3961 tttcaggtca aacagattgc ccaatacgcg caatactttc cacatcggac gcgaatcgcc
     4021 gaagccttgt accacgccgt ggaaagattg cagacggcct tccatattga tgaagctgcc
     4081 tgaggtttcg gtaaacggtg caatcggcaa caacacgtcg cacacgtcca gcagcgtttc
     4141 gctgacaaac ggcgtaaacg ccatcacgct ttttgcctgt ttcaacgcgg ctacggcttt
     4201 tgcaccgtca accgtatcaa tttccggctc gacgttgagc aacaagactg cctgtttcgg
     4261 cgcgtttgcc atttcggcaa cgctctcgcc ggagtttaca ttcaagacat ccgcaccaac
     4321 actgttggcg gcttgcggca aaatacccag cactgcgccg gtcgcgtccg ccagctcttg
     4381 cgcggcggca taaatggcgg cgtaatcagg atggttttgc acttccgcgc ccaaaatcac
     4441 cgctgctttt tcagcgtttt tcaggctggc ggtaacggcg tgttccgcat cggcagacag
     4501 gtttttcaga cgacctgccc actcgtcggg atgtacggct tcttgagaca gaagcggcat
     4561 aaacaattct tctttactgc ttgccaatac gctcaaagcc atgcggtctt tagcggcgcg
     4621 gcgcaggcgg gcggtcagaa gcggctgttc tttgcgcagg ttcgcaccga ctaccaatac
     4681 ggcatcgttg tccgccagcg attcaatgct ttgtcccaac cattgcgcac ctttaatgcc
     4741 gtctgaaaga cgtttgtctt gttggcgcag acgggtggca aagtttttaa cacccaagcc
     4801 gtcggcaagc tttttggcca aatacagctc ttcaaccgta ttcatcggat tggcccaaac
     4861 gccgacttga ttttggttgc cgtctttggc gatacattta attgcgctgt ggacatattc
     4921 caacgcggtt ttccaatcca cgtccatcca ctcgccgccc tgtttgattt tcgggttttt
     4981 caaacggctt tcgtgataca ggccttcata ggcaaaacgg tcgcggtcag acagccaaca
     5041 ttcgttaatc gcttcgtttt ccagcggcaa cacgcggcgg acggtatggt ctttggtttg
     5101 tataatcagg ttgctgccca aagcgtcatg ggcggaaacg gatttgcggc ggttcaattc
     5161 ccaagtacgc gcgttgaagc ggaacggttt gctggtcaat gcgccgacag gacacaaatc
     5221 gatgacgttg cccgacagct cggtttccac cgttttgccg ataaagggca tgatttcgga
     5281 gtgttcgccg cgattcacca tcgcaatttc ctgcaaaccg gcgatttctt cagtgaaacg
     5341 aacgcagcgg gtgcagtgga tacagcggct catttcctcg gcggaaacca aaggccccat
     5401 gtctttgccg acgacggaac gtttttcttc ggtgtagcgg ctggtggttt ttccgtagcc
     5461 caccgccaaa tcctgcaact ggcattcccc gccttggtcg caggtcggac aatcaagcgg
     5521 atggttgatg agcaggaact ccatcacgcc ttcctgcgcc tctcgggctt ttgccgaatg
     5581 cgtacgcaca atcatgccgt ctgtaaccgg cgtggcacag gcaggcaggg gttttggggc
     5641 tttttctacg ttcaccagac acatacggca gttggcggcg atggaaagtt ttttgtggta
     5701 acagaaatgc ggaatataag taccgagctt gtgcgcggct tcaatcaccg tcgcgccctg
     5761 ctccacagat acttgtttgc cgtcgatttc gatttgtaac atggttcgtt cctagttacg
     5821 ggtatttgat aaataatctt atggaggtcg tctgaaaaat gggtttcaga cggccttttg
     5881 agtttcattg acaatcaata ctgtttaaaa cgtttactgc caccttgccg tcattcccgc
     5941 gtaggcggga atccattttt tgaatttcgg caactgcttt tcaaatatcg gtttctttag
     6001 attccactat ggattcccgc ctacgcggga atgacggcaa agttaaattt ttagcatttt
     6061 gcttttaacc aatataaaac caactaaaac tataacttat ttattatatt tttaaatgac
     6121 ttaaataact ctttaacagc acgctcattg tcttcatctg taggctcaaa cttttcacac
     6181 caattaatta tatttacatc gccatgcaat aactctgcat aacatcctac tgcatcgcaa
     6241 ctaccacccc gtgtccttga cgtgccaaaa ataaaatcac aattatgcga ataaagtttg
     6301 tataaatttc tcctaacctc gtattcatta tcaccagatg aataaaaacc aattctctga
     6361 ccttcatgat caaatactgc aacaaaatct aagccgtttc catgtctttc aaaaaagact
     6421 agaaatttag aaaatttccg acaaatctga ttaaaaagcg tattgagtgt cgtactctta
     6481 cctttgttgg ctgcaccgta tagaataaaa attttagctt ccaccattac caccctcccc
     6541 acttatgctc tttcatcggt ccgccgtgtt cgatgtaatg cacaaactca tcacggaaat
     6601 gcttggtaaa gctgcggaca gggaagacgg cggcatcggc gagggcgcag atggtgcggc
     6661 ctgccatttg gttgccgaca gaatccagca aatccaaatc ttccatttta cctttgcctt
     6721 ccacgatacg gtggacgatg cggtagagcc agcccgtacc ttctcggcaa ggcgtacatt
     6781 ggccgcaaga ctcgtcgtag tagaagtagc tcaggcgctc aagggctttc accatgcaca
     6841 cgtcttcgtc catgacgata atcgcgccag aacccagcat cgagcctgct ttggaaatcg
     6901 agtcgtagtc catatttgtc tgcatcatga tgtcggcagg caatacgggc gcggacgaac
     6961 cgccaggaat aacggccttg agttttttgc cgccgcgcat accgcctgcc attttcaaaa
     7021 cttcggcaaa cggcgtgccc aacggcactt catagttgcc cggacgctcg acatgaccgg
     7081 aaatacagaa taatttggta ccgcctgcat tcggaatacc tttatcggca aatgcctgtc
     7141 cgccatcacg gataatgaag gggacggaag agaacgtttc ggtattgttg atggtggtcg
     7201 gcttgccgta caggccgaac gaagcaggga acggcggttt gaagcgcggc tggccttttt
     7261 tgccttccaa cgattcgagc aatgcagttt cttcgccgca aatatatgcg ccgtagccgt
     7321 ggtgggcgaa aagttcgaat tcaaaatccg aacccaaaat atttttaccc aaaaaacctg
     7381 cggcacgcgc ctgcgccaaa gcggcttcaa aacgttggta gccttcgaag atttcgccgt
     7441 ggatgtagtt gtagccggct ttcgcaccca tcgcgtaacc ggcaataatc atgccttcaa
     7501 tcaaggcatg ggggttgaac ataatgatgt cgcggtcttt aaatgtaccc ggctcgcctt
     7561 cgtcggtatt gcaaaccaca tatttttcgc ccgggaagga acggggcata aagctccatt
     7621 tcagaccggt cgggaagccc gcaccgccgc gaccgcgcaa accggaggtt ttgacttcgt
     7681 caatcacatc ggtttgcgag atgttttcgg acaggatttt acgcagggcg gtataaccgc
     7741 cacgtttgac gtattcgtcc aatgtccagc aatcgggatt ggcggtatcc acttggtcaa
     7801 aaatcacgcc tgattggtaa atagccattt ttggtgtgcc tgtttgtttt cgtatcggtt
     7861 gcggccgctg tttcagacga ccttaagatg tctttgtgta ccggcttgta acgtcgtctg
     7921 aaataaaatc tagtttatca aatcgatatt ttcagacgac ctttaatcgt ttttgttgga
     7981 tctcgaccac ttgcttgtct gtcgtcattc ccgcgcaggc gggaatccat cctcaatggt
     8041 aagcaatgtc ttattaaatt cagaaaccga atcttaccgg tggattcccg cctgcgcggg
     8101 aatgacggca tttcggtatt tcagtagggc ggattcttaa atccgacatt ttgccttttt
     8161 acccactctg tcggctacaa gtatccgacc tacgtttaaa tcgtcgtttc agacgaccta
     8221 ctccaactcc gccagtttct tctcaatcgc ttcttcggtc ataaagctgc acatgctgtg
     8281 gttgttgacc agcataacgg gagcgtcgcc gcacgcgccc atgcattcgc cttcgacaag
     8341 agtaaatttg ccgtcgggcg tggtttcgcc gtagccgata ccgagtcttt gtttgaggta
     8401 ttcgccggta gccataccgc cgcgcagggc gcagggcagg ttggtacaaa cggtcaattt
     8461 gtatttgccg acaggctcaa ggtcgtacat attgtagaag gtagcgactt cgtaggcttg
     8521 tgcaggcgag atgccgatgt attcggcaac aaaagcgatg gtttcgggag cgagccagcc
     8581 tttttcggtc tgggcaatac gcaatgcacc cataatggcg gagcggcgtt ggtcggcagg
     8641 gtatttcgcc aactctatgt cgatttgttt taaggattct gcggataaca ttatcggtca
     8701 acctccccga atacgatgtc ctgcgtaccg atgatggcaa cgacatcggc gagcatgtgg
     8761 ccttttgcca tttcgtccat gccttgcagg tgggcgaagc cgggtgcgcg gattttcagg
     8821 cggtagggtt tgtttgcgcc gtctgaaatg atgtaaacgc cgaactcgcc tttcgggtgt
     8881 tcgacagcgg tgtaggtctc gccctcggga acgtgcatcc cctcggtaaa gagtttgaaa
     8941 tggtaaatca ggtcttccat acctgttttc atttcggtac gtttgggcgg agcaaatttg
     9001 tggtttgtgg taatgaccgg acccggatta acacgcaacc actcggaaca ttgtttgatg
     9061 atgcgtacgg attgacgcat ttcttccata cggcagaggt agcggtcgta gcagtcgccg
     9121 ttgacaccga cggggatgtc gaaatccatt ttgccgtaca cttcgtaagg ctgtttctta
     9181 cgcacgtccc attccacgcc cgaaccgcgc aacatcacgc cggtaaagcc tttttgcatg
     9241 gcgcgttcgg gggagacgac gccgatgccg acggtacgct gtttccaaat acggttgtcg
     9301 gtcaggaggg tttcgagtgt gtcgatattt ttcgggaaac gttcgcagaa ggcatcgata
     9361 aagtcgagca tcgtgccttc gcgggattcg ttgagctgct tcaatacttt ggcattgcgg
     9421 aatttgctgc cctcgtattt aggcatgaag tcgggcaggt cgcggtaaac gccgccggga
     9481 cggaagtagg cggcgtgcat acgcgcgccg gaaacggctt cgtacaagtc catcagctct
     9541 tcacggtcgc ggaaggcgta aagaatggcg gtcatcgcgc cgatgtcgaa ggcatgcgaa
     9601 ccgatgccca tcaagtgatt gaggatgcgc gttacttcgg caaacatcac gcggatgtat
     9661 tgggcgcgga taggcacatc gataccggca agtttttcta ccgccaagca atacgcctgc
     9721 tcgttgacca tcatggaaac gtagtccagc ctgtccatat aaggcagggc ttgcaggtag
     9781 gttttggttt ccgccagttt ctctgtgcct cggtgcagga ggccgatatg cgggtcggca
     9841 cggacgattt gttcgccgtc cagctccaaa atcatacgca atacgccgtg cgccgcaggg
     9901 tgttgcgggc cgaagttgat ggtgtagttt cttaatttat tggccaccgt agttctcctc
     9961 acggacgata cgcggcgtga tctcgcgcgg ctcaatggta acaggttggt aaatcacgcg
    10021 tttttgcgct tcgtcgtaac gcatttccac atagccggaa atcgggaagt ctttgcggaa
    10081 cggatgtccg acgaagccgt aatcggtcag gatgtggcgc aggtcgggat ggttgttgaa
    10141 catgatgccg tacatatcaa aggcttcgcg ttcgtaccaa tccgcgctgt tgtaaatatc
    10201 gactacggat tcgactacgg ggaagtcgtc gtctgaaacc cagacgcgta cgcggatgcg
    10261 ttgattgttt ttaacggaaa gcaactgact gacgacggca aagcgtttgc cctgccatac
    10321 ttcgtttttg taagtgctgt aatcgacacc gcacaagtcg accagaagct cgaaatgcaa
    10381 ctcttcatgg tcgcgcaatg cggtcatgac tgaaatatag tgttcgggca gacactcgac
    10441 ggtaatctca cccaaagcgg aaatgacttt gcctgcctga ttgcccaaaa cgcggctgac
    10501 ggtttcgtat aagttttgaa tgcttgccat atcgtcctct ccttactcgt cacgcgcgat
    10561 ggtggaagtg cgcttgattt tttgttggag ctgaatcaga ccgtaaatca gggcttccgc
    10621 agtcggcgga caacccggca cataaacgtc taccggcacg acgcggtcgg caccgcgcac
    10681 aacggaataa gaatagtgat aataaccgcc gccgttggca cacgagccca tagacaatac
    10741 ccagcgtggc tcggcgagct ggtcgtatac gcggcgcagg gcgggcgcca ttttgttggt
    10801 cagcgtaccc gccacaatca tcaggtcggc ctgacgtggg gacggacgga aaatgatacc
    10861 gaaacggtca aggtcataac gcgccatacc cgcatgcatc atttccacgg cgcagcaggc
    10921 caagccgaaa gtaaccggcc acaacgaacc ggtacgcata tagttcaaca ccgtatccgc
    10981 gctggtggtg atgaaacctt ttttcaaaac gccttctatt cccattccag cgcacctttt
    11041 ttccattcgt aaacaaagcc taccgtcaga acgacgataa acaccaacat agaccagaag
    11101 ccgtacgcgc ccaaatcttt gaacacaact gcccacggca acatgaacgc gacctccaaa
    11161 tcaaacagga tgaagaggat ggcgacgagg taatagcgca cgtcaaactt catcctcgca
    11221 ttttcaaagg cttcgaaacc gcattcgtaa ggcgcgtctt tttcggcata gtggcgtttc
    11281 gggcctaaaa tcgtgccgag caggataaac agtacgccgg ccgcgaggcc gacgaggata
    11341 aagacaaaga cgggaaagta agcggacaac atggttacac ccaaatccgt taacaaaatt
    11401 tctacaataa tttcgtattt tagcgaattt caaaaaccat taaaaggtaa atatcggcaa
    11461 aacgcccaaa aaaacccaat aaatacaatc atgttatgat aacgattctt atttgatttt
    11521 ataaggtcat ataaattttt acaccgtaat tcg
//
LOCUS       DAWEYF010000057        11516 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.057, whole genome shotgun sequence.
ACCESSION   DAWEYF010000057 DAWEYF010000000
VERSION     DAWEYF010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11516
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.057"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            122..544
                     /locus_tag="WGN93_001047"
     CDS             122..544
                     /locus_tag="WGN93_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226963.1"
                     /translation="MKKTFLSAVLLLSAATQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGWGRGRWATMKFQNGEFMYTVDAGFDSV
                     THAVGSGVLVERRGKEIARFDCTSKTAQANFDDDDFAW"
     gene            562..1323
                     /locus_tag="WGN93_001048"
     CDS             562..1323
                     /locus_tag="WGN93_001048"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ0226964.1"
                     /translation="METVKPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTV
                     IAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEMAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            1338..2672
                     /locus_tag="WGN93_001049"
     CDS             1338..2672
                     /locus_tag="WGN93_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ0226965.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLEIAVSGLPLILDGVLKPSVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAETAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTTAENQEAEQATSEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            2669..3886
                     /locus_tag="WGN93_001050"
     CDS             2669..3886
                     /locus_tag="WGN93_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ0226966.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            3961..5025
                     /locus_tag="WGN93_001051"
     CDS             3961..5025
                     /locus_tag="WGN93_001051"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ0226967.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     MQHEADIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            5211..6590
                     /gene="radA"
                     /locus_tag="WGN93_001052"
     CDS             5211..6590
                     /gene="radA"
                     /locus_tag="WGN93_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ0226968.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSAVTAAEVPRNPTGMSELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(6866..7345)
                     /locus_tag="WGN93_001053"
     CDS             complement(6866..7345)
                     /locus_tag="WGN93_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ0226969.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPSTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTIGE"
     gene            complement(7477..7836)
                     /locus_tag="WGN93_001054"
     CDS             complement(7477..7836)
                     /locus_tag="WGN93_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ0226970.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(7875..11489)
                     /gene="recB"
                     /locus_tag="WGN93_001055"
     CDS             complement(7875..11489)
                     /gene="recB"
                     /locus_tag="WGN93_001055"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ0226971.1"
                     /translation="MSASIQAFDPLTVPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRGRLDDVLQVLESKGIAKLGDDTLSDGIAAYCAE
                     HHEGDTFLPELLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVEMTEEDGDRLLIPAQDFWRERVSNDPVLAALALKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTICRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLGDQISLAENNSNDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRRAYACEKDGITMLKRNWQRVTDNAPADTDFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEMWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICIIDYKSNHLGADASAYTQQAMDEAVTHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGTDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         2487 a         3045 c         3429 g         2555 t
ORIGIN      
        1 gtgccgccct atgtgttgcc ctaatttgga aggggttaca cccttttcaa ataaaatctg
       61 atgctgctgc cacgaaggac ggatgtccaa gtggcggggt tttaaccatt aaggaaatac
      121 gatgaaaaaa acgttccttt ctgccgtatt gcttctgtca gctgcgaccc aaaccgtgtg
      181 ggcagatacg gtgttttcct gtaaaacgga caacaacaaa tatatagaag ttcaaaaaat
      241 taaccgcaat ctttacgaat attcgttcgg cagtgcggca aaaaaagaaa ttgccatacg
      301 caacagcaaa gctgatctgt tggggcgttc cgacaggtgg caaggctggg gcagaggccg
      361 ttgggcgacg atgaaattcc aaaacggcga atttatgtac accgtagatg caggcttcga
      421 ttccgtgacc catgcagtag gcagcggtgt ccttgtggag cgtaggggca aggaaatcgc
      481 acggttcgac tgtacgtcga aaaccgcgca ggcgaatttc gacgatgacg attttgcctg
      541 gtaatcgggg cggataaggc gatggaaaca gtgaaaccca tcatgctgat tgtccgaccg
      601 tcgggcaggg cgaaggacga tgtggaaacc tgccgtcgtg ccggatggca ggcggaagtg
      661 ttgagcccga ttgaaatcga agcagatgct gccggactgg aacttttgtc cgaacaatat
      721 gcccgtgcgg atgccgtgtt ttgggtcagt ccgaccgccg ttgaaaccgc cgtcccgtac
      781 cttaaccttt cagacggcat aaaggcgcag attgccgtag ggcagggcag ccgccgcgca
      841 ttggaacgct gtttggtcag aacggtcatc gcgcctgatg acggcaacga cagcgaggcg
      901 gttttgcgcc tgccggtttg gaacagtctg cccgaaggtg cgcgcgtatt gtttgtgcgc
      961 ggacacggcg ggcgggattt tctgatgaat gccttgcagg agaaaggttt tcggacggag
     1021 atggcagaag tctatttcag acggcataaa cctttgaact ttcaaaattt ccaaaccgaa
     1081 aatattgccg ccgcctatat tacgtcgacc gagctggtgc gcttgctgtt cgggcagctt
     1141 ccgccgcaat tttcccgatt cttcaaatcc ttgctatact ttacccatca tccgcgcatt
     1201 gcggaggcat tgaagcgcga aggcgtgtgt tcggtcgaaa ccgtccctac gctggaagcc
     1261 gcgctttccc attcttccat ttccgtttca gacggcatgg tctttcccgg aacctcaaat
     1321 taataaggag caaaacggtg ggcgaacctg aaaacaaatc atccgaaccc gtacgcgaga
     1381 tacaggcatc aaaagaaatg ccgtctgaaa cctcttcccc acgcaaagaa aacgaaacag
     1441 aagtacacat tcctgccgct ccttttatcg tcaaacagtc cggcagcaac gctttggcag
     1501 tctgcgccct ggtattggcg gcattgggtt tgggtacaag tggttttttg tttgtccaag
     1561 gacagaatgt cttgaaaaac caagagctgg cattcaacca aaaaatcgac aaagccgctt
     1621 tgggcgagtc ggaaaacgcc gccctgctca aagacaacct caaccggcaa gccgccatac
     1681 aatcagagct cgaccgtttg gacggaaacg tcaaagcaaa cggcgaacaa atcttggaaa
     1741 tgcaaaaatc ctatcgcgag ttgaccaaag gacgcgccga ttggctggtg gacgaaaccg
     1801 agaccatact caatctggcg gcgcaacagc tggtgttgac tggcaatatc caaacggcag
     1861 tcggcgtatt ggagcatatc gacagccgcc tgtcccgttt caatcaggca gagcttctgc
     1921 cgatcaagca ggcggtcagc agcgacttgg cggaactgaa aaaccgtccc tatgtcgata
     1981 tttccggcac ggcattgcgc ctcgacaggc tggaaatcgc cgtatccgga ctgccgctga
     2041 ttttggacgg cgtattgaaa ccgagcgtac aggcacgcaa cgaagccgtt tccgcttcat
     2101 ggtggcagaa cgtatgggaa aaatccctcg gcacattgaa ggggctggtc gaaatccgcc
     2161 gtttggaaaa caacgatgcc atgctgattt ctcccgaaca ggcctatttt gtgcgtgaaa
     2221 acctgcgtct ccgccttttg gatgcgcgga ctgcattaat gcagcgcaac agcgaagtct
     2281 atcagggcga tttgaacaat gccgaaaccg ccgtcagaca gtattttgat gccaaatccc
     2341 ccgccacgca gtcgtggttg aaggaattgg cggaattgaa ggcgttggat gtgcgcatga
     2401 cggcggatga cggtttgaaa aacagcctaa atgccgtccg cgcctatcgc gacggtacgc
     2461 gcatgacgac ggcggaaaat caagaagcgg aacaggcgac ttccgaaccg gcaaacgaaa
     2521 acacagcttc cgaaccggct gccgcatcgg atgtgaagac catagaagca ccgtccctgc
     2581 cttcggaacg caaaccggaa cagcctgcaa aaaaacagcc cgtaccggaa aaggcagggc
     2641 gttcgccgtc cgctaaagga gaacgcgcat gaaaacggta gtctggattg tcgtcctgtt
     2701 tgccgccgcc gtcggactgg cactggcttc gggcatttac accggcgacg tgtatatcgt
     2761 actcggacag accatgctca gaatcaacct gcacgccttt gtgttaggtt cgctgattgc
     2821 cgtcgtggtg tggtatttcc tgttcaaatt cattatcggc gtattcaata tccccgaaaa
     2881 gatgcagcgt ttcggttcgg cgcgtaaagg ccgcaaggcc gcgcttgcct tgaacaaggc
     2941 gggtttggcg tattttgaag ggcgttttga aaaggcggaa ctagaagcct cacgcgtgtt
     3001 ggtcaacaaa gaggccggag acaaccggac tttggcattg atgttgggcg cacatgccgc
     3061 cgggcagatg gaaaacatcg agctgcgcga ccgttatctt gcggaaatcg ccaaactgcc
     3121 ggaaaagcag cagctttccc gttatctttt gttggcggaa tcggcgttga accggcgcga
     3181 ttacgaagcg gcggaagcca atcttcatgc ggcggcgaag atgaatgcca accttacgcg
     3241 cctcgtgcgt ctgcaacttc gttacgcttt cgacaggggc gacgcgttgc aggttctggc
     3301 aaaaaccgaa aaactttcca aggcgggcgc gttgggcaaa tcggaaatgg aacggtatca
     3361 aaattgggca taccgccgcc agctggcgga tgctgccgat gccgccgctt tgaaaacctg
     3421 cctgaagcgg attcccgaca gcctcaaaaa cggggaattg agcgtatcgg ttgcggaaaa
     3481 gtacgaacgt ttgggactgt atgccgatgc ggtcaaatgg gtcaaacagc attatccgca
     3541 caaccgccgc cccgagcttt tggaagcctt tgtcgaaagc gtgcgctttt tgggcgaacg
     3601 cgaacagcag aaagccatcg attttgccga tgcttggctg aaagaacagc ccgataacgc
     3661 gcttctgctg atgtatctcg gtcggctcgc ctacggccgc aaactttggg gcaaggcaaa
     3721 aggctacctt gaagcgagca ttgcattaaa gccgagtatt tccgcgcgtt tggttctggc
     3781 aaaggttttt gacgaaaccg gagaaccgca gaaggcggag gcgcagcgca acttggtttt
     3841 ggcaagcgtt gccgaggaaa accgaccttc cgccgaaacc cattgaaacc ttcagacggc
     3901 atcgttgaaa tgccgtctga aaaccatttc acttgacaaa cagactgaca gaaaacccgt
     3961 atgactcttt taaaaaacga taccttcctc cgcgccctgc tcaaacagcc cgtcgaatac
     4021 acgccgattt ggatgatgcg ccaggcgggg cgttatctgc ccgaatacaa agccacacgc
     4081 gcgaaagcgg gcagcttcct cgatttgtgc aaaaacaccg aattggcgac cgaagttacc
     4141 atccaacctt tggaacgctt cgatttggac gcggcgattt tgttttccga catcctgacc
     4201 gtccccgacg caatgggctt gggactgtat tttgccgaag gcgaaggccc gaaattcaaa
     4261 cgcgccatgc aacacgaggc cgacatcgcc aagctgcacg ttcccgatat ggaaaaactg
     4321 caatacgttt tcgacgcggt aacttccatc cgtaaagcat tggacggccg cgtaccgctt
     4381 atcggctttt ccggcagccc gttcacactc gcctgttata tggtcgaagg cggcggcagc
     4441 aaagaattcc gcaccatcaa aaccatgatg tactcgcgcc ccgatttgct gcacaaaatc
     4501 ctcgatacca acgcccaagc cgttaccgcc tacctcaacg cccaaatcga cgcgggcgcg
     4561 caggcggtgc aaattttcga cacttggggc ggcgtgttga gcgacgcggc gtttaaagaa
     4621 ttcagcctca aatacatccg ccagatcgtc gccggactca aacgcgaaag cgaaggccgc
     4681 cgcgtgcctg ttatcgtatt tgccaaaggc ggcgggctgt ggctggaaag tatggcccaa
     4741 atcggcgcag acgcattggg cttggactgg acgtgtaaca tcggcgaagc acgccgccgc
     4801 gtcggcaagc aagtcgccct gcaaggcaac ttcgacccgt tcgccctctt cggtacgccg
     4861 gaatccatcc gcaccgaggt cgcacgtatc ctagccgact acggacacgg cagcggccat
     4921 gtcttcaacc tcggacacgg catcaaccaa cacgccgacc ccgaacacgc caaaatctta
     4981 gtcgataccg tacacgagct gtctcggcag tatcacggcg ggtaagccgg caggaaaccg
     5041 cccgatatgc cgtctgaagc cgagagatgg ccggttaggg taaaaataag gcaatgcggc
     5101 aatatccgcc gtgtacggat agtacatgac ggcggcgttg tcgtattggc gcaatcccaa
     5161 ccgtccctat gttcagacgg catttttgtt ttcagatgca gggaaaaccg atggcaaaaa
     5221 cgcttaaaac cctttaccaa tgcaccgaat gcggcggcac ttcgccgaaa tggcaaggca
     5281 aatgcccgca ttgcggcgag tggaacacgc ttcaagaaag cttagccgcg cccgagccga
     5341 aaaacgcccg cttccaatct tgggcggcgg atacctcgac cgtccaatcc ctctccgccg
     5401 ttaccgctgc cgaagtgccg cgcaacccga ccggcatgag cgaactcgac cgcgtattgg
     5461 gcggcggttt ggtcgatggc gcggtcatcc tactcggcgg cgatcccggc atcggcaaat
     5521 ccacgctgtt gttgcaaacc atcgccaaaa tggcgcaaag ccgcaaagtg ctgtacgttt
     5581 ccggcgagga atccgcccaa caagtcgccc tgcgcgcgca gcgtttggaa ctgcccaccg
     5641 aaggcgtgaa cctgcttgcc gaaatccgca tggaagccat tcagacggcc ttgaaacagc
     5701 atcagcccga agtcgtggtt atcgattcca tccaaaccat gtattccgac caaatcactt
     5761 ccgcccccgg ctccgtgtcg caggtgcgcg agtgtgcagc ccaactgacg cgcatggcga
     5821 aacagatggg catcgccatg atactggtcg gacacgtgac caaagacggc gcgattgccg
     5881 gcccgcgcgt gctggaacac atggttgata ccgtgctgta tttcgagggc gaccaacatt
     5941 ccaactaccg catgatacgc gccatcaaaa accgcttcgg cgcggcaaac gaactgggcg
     6001 tgttcgcgat gacggaaaac ggtttgaaag gtgtgtccaa cccgtccgcc atcttcctcg
     6061 ccagctaccg cgacgatacg cccggctcgt gcgttttggt tacacaggaa ggcagccgcc
     6121 cgcttttggt cgaaattcag gcattggtcg atgacgcgca cggcttcacg cccaaacgcc
     6181 tcaccgtcgg actggaacaa aaccgtcttg cgatgctgct tgccgtgtta aaccgacacg
     6241 gcggcatcgc ctgtttcgat caggatgtgt tcctcaacgc cgtcggcggc gtgaaaatcg
     6301 gcgaaccggc ggcggatttg gcggtcatcc tcgcgatgct ttccagcttc cgcaaccgcc
     6361 ctatgcctga aaaaaccgtg gttttcggcg aaatcggctt aagcggcgaa gtccgccccg
     6421 tcgcacgcgg gcaagagcgg ctcaaagaag cggaaaaact cggcttcaaa cgcgccatcg
     6481 ttcccaaagc caatatgccg cgcaacgcca aagagtttcc gaacctgaaa atctacggcg
     6541 tttcgagttt gcaggaagcc atcgatattt gccgtgacag cagggaataa acggaaatgc
     6601 cgtctgaaat caggtttcag acggcatttg gtttgtggcg gattgaaaca agaaggcata
     6661 ccggcgacag ataagatttg tggcaaagtt gcctgtgatg tggcaaaaac acacacgccc
     6721 gtcatccccg cgagggcggg aatccggaat cgtccgtttc ggcaatgatt gaaaatcacg
     6781 gcaatccaac cgcttggatt cccgacttcg cgggaatgag gggcgtgtgc gtttgatttc
     6841 catccgccat atgtcggcaa cgggcttatt cgcctatggt tttttgtatc agtttttcgg
     6901 cgtttgccaa agtgtttgcc acttcgtcga aaccgatgcg gctgccggcg atgagggcgc
     6961 gcgtatcggt ataggcggcg cgtactttgc cgtccgtttc ggtaacgagg acgcgcaggg
     7021 gcagttgcag ggcgaaggcg gggtctttga ccatcagcgg cgtaccggct ttgggcgtgc
     7081 cgaagacgat gacttttgcc ggctgcatcg ttaagccgtt tcggcgggcg gcttcctgat
     7141 ggtcgatgac ggcaaaaatg tccatccctt tgctttttat ggcggtttca aggcggctga
     7201 cggtttcgtc aaaactgtat tttgaggtga gggtatgcgt ggtcatagcg gtttcgtttt
     7261 gggtggacgg ttcgctggca ggatgtgccg aagcggttga aatgcagagt gcggatgcgg
     7321 caatcagggg gagtatgtgt ttcatcgtat ttcctttttc cttttcggtt tgtttatcag
     7381 gcttcggacg gggcggcacg cgccgcgccc gatgttgcgc cgcgtgccgg aacgccgtat
     7441 gccgtctgaa agcctgtcct ttcagacggc attgcgtcat ttcatccctt ttttgagcag
     7501 gtcttcataa ccgccgtgat tggcaacatt tgtataacct gcttttttca gctcttgaag
     7561 ggcggcttcg gcacgccgtc cgctgcggca gtagaggttg acgggcgtgt ctttgtcggg
     7621 cgcggcttcg tgtatgcggc ggacgatttg gtcgacgggg atgttgaccg cgttgtgcaa
     7681 atgcccttcg ctaaattcct gttcggaacg gacatcgatc caaacggccg gatgttgcgc
     7741 ggtttgggcg gcggatacgg gtttttgcgg ggctgcctgc gcggcaaagg ctgctgaggc
     7801 aatgagtgcg gcggtaatca ggtgtttgat attcataggg ttctcctgcg gttgtcgttt
     7861 taagggacgg gaagttattt tatctgttcc aaagcggcgg catctatgtc ccaacgccaa
     7921 acgccgccgc ctttgccgtc tgtgccgcgc aaaaacaggt agcggacgga aacggcggcg
     7981 ggcggttgtc cgcgcagttt gaagtagcgt gcggcggcaa cggcgtaaat cagcgcctga
     8041 aggtaatagt ggtggtgcgt gacggcttcg tccatcgcct gttgcgtgta ggcggatgcg
     8101 tccgcgccga gatggtttga tttgtagtcg atgatgcaga tattgccgtc ggggtcttgg
     8161 cagaccatat cgataaagcc gtttaaaaag ccgttgacgg tgtggaagtc gagcgtttcg
     8221 gcggcggcac ggcagacttc gggcagcctg atgtcgtcgc gggcaaacca gtcgcgcagc
     8281 cgtttgaggc cgaagtcttc ggtatggagg gtaaagccca tttcgggaca gcggcactcg
     8341 ggcggaatgt cggacaggca gtatgccccc gtcagcggcg ttttacggca ggcttccgcc
     8401 atttcggcaa cggcgggcag ccacatttct tcaaacccgt atttcttcag cttgtcggca
     8461 atgagggttt cctgtccggc ggctgcttgt ccgaatttga aatcttcaag aatttcgtgc
     8521 aggcacagcc ccgcctgcgt gcctttcgga aaatcgtgta tcgatatgcc gtctgaagcc
     8581 gtcggcgttt cagacggcat cgccggcacc gaggtttcgg cggcatccaa ggacgggcag
     8641 gcatcttctt cgccgccgtc gggcgtttgg gtatggcggc ttaaagcggt aaagctggtg
     8701 tggcggacaa atcggaatct gcgttcggga atgctgtttg cggcaaattc ggcggtttga
     8761 ccggcgttgc cgcgataggc ggcagggggc ggcgcatctt ctgtgaaggc gaaatccgtg
     8821 tcggccgggg cgttgtccgt cacgcgctgc cagttgcgtt tgagcatcgt tatgccgtct
     8881 ttttcacacg cataggcacg gcggacggtt tcacggctgt cttgcggcaa gccttcaatc
     8941 aggtaggcga gggggttgtc ggcggtatcg gaagaatagg cggcgtagat gttgagctgt
     9001 tcctcggcac gcgtcagcgc gacataaagc aggcgcaggc gttccgccat ttcttcgtcg
     9061 gcgtattgct tctgttcgtc ttccgacagt tgcgcctttg ccaacagttc ggttcggttg
     9121 gcgctttggt ggaggatttg ccagtcggac ggcccggtat cttgcgcgtc ccacgcaaac
     9181 gggcagtaca ccagcggata ctgcaaacct ttcgaggcgt gcatggtaac gattttgacc
     9241 aaatcttcgt cgctttccag acggatggcg cggttgtcgt tgctgttgtt ttcggcaagg
     9301 ctgatttggt cgcccagcca cttgtgcaaa gcggcggggt tgcggttttg ggcgtcttcg
     9361 gcggcaagca gttcgagcag ttggaaataa ttggtcaggc tgcgcccgtt gttccggctt
     9421 aagaggcgcg tttcgatgcc gtgtgtttgg gaaaattgct gcatggcggc gaaaatgccg
     9481 tattgattcc agttgtcgag cgcggttcgg gcagattccg cccaatgcaa aatctcgctt
     9541 tcgttttggt tgaagtcgtg caattgctgc gcgtcataac cgaatatgcc gcttgtcagg
     9601 acaaagcgca gcgttccggc gcggcgcggt tcgagccaga agccgatgag tgcggaaagg
     9661 gcggcggctt cgggcgaggc gaacacggat tcgcgcgaaa gcaggacgct ttgcacctgc
     9721 cgttttttca gggcggcgga aaccatcacc gcctcgttgt gcgtgcgtac cagcacggca
     9781 atatcgcccg actgcaacgg gcagcctttg aaattcagac ggcctccggc ggcttcgttg
     9841 agcgcgtggg cgatttcgtc ggcgcaatag tcggcggcac gtcggcgcaa aacgtctttg
     9901 ttggcttttt cattgtcgtt ttcgtgcagc caacgaacct gtacggcagg acgtttgggc
     9961 gacaatctgc tttcggcacg cgccgcaccg acttccgaat agccgatgtt ttccaaaacg
    10021 aacgggcgtt ctttgaggcg gaacagcgcg cctatgctgc cgataagcgc ggcgtggctg
    10081 cggtagttgg tggcgagcgt gtagcggtgc cgcgcgtctt ccgccgcctg aaggtaggcg
    10141 taaatgtccg ctccgcgaaa gctgtaaatc gcctgtttgg gatcgccgac gaggaacagc
    10201 ggtcggtttt gggcgatgaa gattttttgg aagatttcgt attgcagcgg gtcggtgtct
    10261 tggaactcgt cgatcagcgc ggtttcccag ttttcggcaa cggcgcgggc gagggtttcg
    10321 gcgtgcggat tgtcggtcag cgcggtgtgg acatcgagca gcaggtcgtc gaaaccgcgt
    10381 tcgcggcgcg attttttcat ctcggcaagg ctgcggttga ggtattcgat taaatccagt
    10441 tgcagccgga tcattgttgc ttcttccgct tcttcgagtg cgttcaaatc gcgcccgaag
    10501 tctgccagtt tctgcaattc ggcaaatact gccgcatcgg gcgttttgcc ttttttcagt
    10561 ccggcttcga gtttgtcgga tgcaagtttc aagagtctgt cgtgtgtgtc tttgtccaga
    10621 aagggcagtt gtccggcggc ggatttttgt gccagttctt taaaaaggtt gccgaagctg
    10681 tttttgcggt aactgttgcc gttgaggtcg ggatgaatgc gccaaaagcc ggcttccagt
    10741 tctggcagca ggcggcagat ggtttgccat gaggtttcgg cgttgcgctg cgcctgtttc
    10801 aaatccgcct gcggacggcg gaaattcagg tacgggcggg aaagatagcg cgaaatttgg
    10861 gcaaggacgg tttgcggcac agctttgcgt ttaagcgcca atgcggcaag caccggatca
    10921 ttgctgacgc gttcccgcca aaaatcttgc gccgggataa gcaggcggtc gccgtcttct
    10981 tcggtcattt cgacatcgaa cggtgcttgg cacaggaagg cgtagtcgcg caggatgcgc
    11041 tggcagaagc cgtggatggt atagatggcg gcgttgtcga attgcccgat ggcggccttg
    11101 aggcggacaa tcagacgcgt ccggccctct ttttgcaaag cctgttttaa gagttcgggc
    11161 aggaaggtgt cgccttcgtg gtgttcggcg cagtaggcgg caatgccgtc tgaaagcgtg
    11221 tcgtctccaa gtttggcaat tcctttgctt tctaaaactt gtaacacatc gtccaaacgc
    11281 ccgcgcaggc gtgttttcag ctcggcggtg gcggctttgg tgaaggttac gaccaatacg
    11341 cgttcgacgt ttttttgttc taatacgatc aggcgtgtaa acagggcggc aatgccgtag
    11401 gttttgccgg tgccggcaga ggcctcaatc aggttggtgc cggaaatggg gacggttagc
    11461 gggtcgaatg cttggatgct tgcagacata gtgcgcgctc ggaaaacggt tggacg
//
LOCUS       DAWEYF010000058        11491 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.058, whole genome shotgun sequence.
ACCESSION   DAWEYF010000058 DAWEYF010000000
VERSION     DAWEYF010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.058"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            271..1107
                     /locus_tag="WGN93_001056"
     CDS             271..1107
                     /locus_tag="WGN93_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ0226972.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFDERDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGLAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RY"
     gene            complement(1159..2451)
                     /locus_tag="WGN93_001057"
     CDS             complement(1159..2451)
                     /locus_tag="WGN93_001057"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ0226973.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(2507..4414)
                     /gene="pglD"
                     /locus_tag="WGN93_001058"
     CDS             complement(2507..4414)
                     /gene="pglD"
                     /locus_tag="WGN93_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ0226974.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYRAVTRFVSFRILSTALAGSIVSAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEV
                     VKQMREYSAAFVDDDPKLWHTVICGLAVYRPDDISALIERYGVEKILLAIPSATQEQR
                     RRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSADI
                     EGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLNT
                     EILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLECA
                     LAATASGVRTFVLISTDKAVRPTNTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGNV
                     LGSSGSVVPLFEKQIAEGGPITLTHQDITRYFMTIPEAAQLVIQAGAMGTGGDVFVLD
                     MGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRKT
                     GHPRIMTANETMLPWRELSALLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDLL
                     WVRETHRKNAV"
     gene            complement(4462..5637)
                     /locus_tag="WGN93_001059"
     CDS             complement(4462..5637)
                     /locus_tag="WGN93_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ0226975.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEF
                     AAFAGTRYAVALANGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAALTPTTKAVIVVHLAGMPAEMDGIMALAKEHNLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVSELNARKVPCYQGSCSEV
                     YLEKSFDDTPWRPKERLKNAVELGDTSLMFLVHPTLTDDEIAFCKEHIEAVLAEATR"
     gene            complement(5715..6956)
                     /locus_tag="WGN93_001060"
     CDS             complement(5715..6956)
                     /locus_tag="WGN93_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NeuD/PglB/VioB family sugar acetyltransferase"
                     /protein_id="HEZ0226976.1"
                     /translation="MSKFFKRLFDIVASASGLIFLSPVFLILIYLIRKNLGSPVFFFQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDGERLTPFGKKLRAASLDELPELWNILK
                     GEMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNAASWDERFACDIWYI
                     DHFSLCLDIKILLLTVKKVLIKEGISAQGEATMPTFTGKRKLAVVGAGGHGKVVAELA
                     AALGTYGEIVFLDDRAQGSVNGFSVIGTTLLLENSLSPEQYDIAVAVGNNHIRRQIAE
                     KAAALGFALPVLIHPDATVSPSATVGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHD
                     CLLDAFVHISPGAHLSGNTRIGEESWIGTGACSRQQIRIGSRATIGAGAVVVRDVSDG
                     MTVTGNPAKPLAGKNTETLRS"
     gene            complement(7124..8541)
                     /locus_tag="WGN93_001061"
                     /pseudo
     CDS             complement(7124..8541)
                     /locus_tag="WGN93_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
     gene            complement(8736..9845)
                     /gene="ribD"
                     /locus_tag="WGN93_001062"
     CDS             complement(8736..9845)
                     /gene="ribD"
                     /locus_tag="WGN93_001062"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ0226977.1"
                     /translation="MFSDTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQG
                     FHVKAGEPHAEVHALHQAGEMAQGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYRKHAHVRILMPSETAGGK
                     IDLNSLMRLLADEGIGELIVEAGSELTSAFLAEDLADEIVLYRSPKILGSGKDLFSLP
                     ENRAALSAPPLWMPVSTEILGHDIKTVFRKNGNAF"
     gene            complement(9878..10342)
                     /gene="nrdR"
                     /locus_tag="WGN93_001063"
     CDS             complement(9878..10342)
                     /gene="nrdR"
                     /locus_tag="WGN93_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ0226978.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPSCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            complement(10371..11213)
                     /locus_tag="WGN93_001064"
     CDS             complement(10371..11213)
                     /locus_tag="WGN93_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ0226979.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
BASE COUNT         2349 a         2947 c         3652 g         2543 t
ORIGIN      
        1 cacgttttca gacagtcttt tatagtagat taaaattgaa aacggtcata tcgccattcc
       61 ctcgaaagca ggaatccgga agtttgaaat agcggttaac cttaaacatt tccaataaat
      121 caaagtctgg attcccgcct gcgcgggaat gaccgcatag cggcttttcc tttgcatttg
      181 ccatacacct gttttttgaa atcaccgccg ccacaccgcc cgacaatatt gaaacaccct
      241 gcccaccatt taccacgcac ataacgcctt atgatagacc tgcactgcca ttccaccgtt
      301 tccgacggta tgctctcccc cgccgaagtc gtccgcctcg cgcatcaaaa cggctgcacg
      361 ctgctggcgt tgaccgacca cgaccacacc ggcggcatcg ccgaagcgcg tgccgaagcc
      421 gacaggctcg atttgcgcct gattaacggc gtggaaatct ccgtcacttg gcgcggacgc
      481 accatacacg ttgtcggttt ggatttcgac gaacgggacg aaaacctgca aaacctgttg
      541 gcgcaagtgc ggcaaggccg tctgaaacgc ctcgaagcca tcgccgccaa gcttgaaaag
      601 aaaggcatcg gcggcgcata cgacggcgcg ctcgcgctgg cggcaaacaa agaaatggtc
      661 agccgcacac acgtcgccga gttcctcatt cgggtgggac acgtcaaaaa caagcagcag
      721 gcgttcacca aatacttggg cgacggcaaa tcctgcgccg tccgccacga atgggcgacg
      781 ctggaagact gcgtctccgc cgtcaacggc gcgggcgggt tggcggtcat cgcccatccg
      841 atgcgttatg atttgtccgc caccgccaag cgcaatctgt ttgaagaatt taaaaacctc
      901 ggcggcgcag gcatcgaagt ccacagcggc aactgctgca aaaacgaccg cctcaactac
      961 gcgcttttgg cagaacgctt cggtatgctc gccagcgcgg gcagcgactt ccaccgttta
     1021 aacgacttta gcggcggcat tctcggcgcg tgtcccgaac tgccggaaaa ctgcaggccg
     1081 gtgtgggcgc atttttcccg atattgaatg cagataaaaa tgccgtctga aaacctttca
     1141 gacggcattt tttgcggttt aaacgttgtc gtacagtttt cggacggttt tgccgatggc
     1201 ggcgatgcct ttttccagcg tttgagcgtc ctgcgcgatg ctcatgcgga tgcactcgcc
     1261 cgcgtgcggg taatcccgcg tgtcgatgcc gacgaagaaa tgctcgcccg gaataatcag
     1321 cgtaccttcg gctttgagca tttcgtacag ggtttgcgaa gaaacgggca ggttttcaaa
     1381 ccagagccac aggaaaatcg cgccttcggg tttgtggatt ttcatcgggt acgcgcccag
     1441 ctcgcgcttg agcagcgaga cggcggtttg cgcctgattg cggtaaaacg gccggatgac
     1501 ttggtcggca agccgtttca tctcgccgct ttccagcagc ggggcggcga tggccgcgcc
     1561 gaagcgcgtg ggggcaaggt tcacaatcgc gttcaggctg ctgacggctt tgacgacttc
     1621 gggcgcggcg acgatgatgc cggtgcgaac gcccggcagg ccgactttgg aaaggctgaa
     1681 gcagaggatg atgttttcgt gccaattcag cgttacgtcg ctgtaaatga tgttggggaa
     1741 cggcattccg taggcgttgt cgataatcag cggaatcccg tgttcacgcg ccaaagcgtc
     1801 caaacgtgcc atttcgccgt cggtcaacac attgccggtc gggttggtcg ggcgcgaaca
     1861 gcaaatcgcg ccgattttgc ccgctttgag ttcgggcagg ttttccagtg cgtcaaagtc
     1921 cacgcggtat ttgaagaagc ctgcttcgcc ttcgtgttcg acgttttcga ttttgggctt
     1981 gacagaaacg aagtgctgcc cttcgatatg tacgtcggca tagccgatgt attcgggcgc
     2041 gagcggcaac aaaatggctt tttctgcgga tgtgccgtct gaaagcttga atttgccgcc
     2101 gaagaggttg aataaataga aaaacgcgtt ttgcgaaccg ttggtcagcg cgatattgtc
     2161 ggcggtcagg ttccagccgt attcgcggtt gaggaaggcg gtcaacgcgt caatcagcgc
     2221 ggcatcgcct tgggggttgg agtagttgcc gatgttttcg acggcgtgtt ctgccgccag
     2281 tttggagaat atgtcggcaa acgcccgatc gatttccgga atgcgcgccg ggttgccgcc
     2341 gccgagcatg ttgacgggct tgtcgctttt gagcgcgtcg ccgaggtcgt ccatcagttg
     2401 gaggatgccg ctgtgttgcg tgaatttttc gccgaatgcc gaaaactgca tgtcaaactc
     2461 cgtgtgtgta aggtaggttg gtttgtacgt tatgccgtct gaaggttcag acggcatttt
     2521 ttctgtgtgt ttctcgtacc caaagcaggt cgcagatacc gtcgctcggg gcaaagccgg
     2581 tcggggcgtt gatgagcagg gtgcggattg cctgctggtc gtaacggtcg caggccgcac
     2641 ggatgcggtc gagcagggcg gagagctcgc gccacggcag catggtctcg ttggcggtca
     2701 tgatgcgcgg atggccggtt ttgcggacgt tgtcgccgat gagcagctct tcgtagagtt
     2761 tttcgccggg acgcagtccg gtaatgagga tttcgatgtc gccgtcgggt tgttcgggtg
     2821 ttttgggttt gaggccgctt aaggtaatca tttggcgggc aaggtcgatg attttgacgg
     2881 attcgcccat atcgaggacg aatacgtcgc cgcccgtacc catcgcgccg gcttggataa
     2941 ccagttgcgc cgcttcggga atggtcatga agtagcgggt aatgtcttgg tgggtcaggg
     3001 taatcgggcc gccttctgca atctgttttt caaacagcgg gacaacggag ccggacgaac
     3061 ctaaaacatt gccgaaacgc accatgctga agcgggtttt ttgtccgggt tcggcggcga
     3121 gcgcttgaag gcagagttcc gccatgcgtt tgccggcacc catggtgttg gtggggcgga
     3181 cggctttgtc ggtggagatg aggacgaaag ttcttacgcc cgatgccgtg gcggcaagcg
     3241 cgcactcgag tgtgccgaag atgttgttgc gtatgccttc gacggtgttg aattcgacca
     3301 tggggacgtg tttgtaggcg gcggcgtgat agacggtcgc aacggaaaag gcggtcatga
     3361 cgtgttcgag cagggtgcgg ttttgcaccg aaccgagaaa gggcaggatt tcggtgttga
     3421 ggcgtttttg gatgcaggtt tcgcgcaatt ctttttcgat ggcgtacagg gcgaattcgg
     3481 ataactcgaa cagcagcagc ttttcggggc ggcggcggat aatctggcgg cagagttccg
     3541 aaccgatgga gccgcccgcg ccggttacca tgacggtttt gccttcgatg tcggcactca
     3601 tgaggcggtt gtcgggcgcg acggaatcac gcccgagcag gtcggacacg gagatttttt
     3661 tgagcgtgcc gatgctgatt ttcccgtcca tcaggtcttt cattccggga atggtcaaca
     3721 cttcgcaggg ataggcttcc agtttgttga tgattcggcg gcgttgttcc tgagtcgcgc
     3781 tgggaatggc aagcaggatt ttttccacgc cgtagcgttc gatgagggcg gagatgtcgt
     3841 cggggcggta aacggcaagg ccgcagatga cggtgtgcca cagtttgggg tcgtcgtcca
     3901 caaaggcggc ggaatattcg cgcatttgtt tgacgacctc gagaagctgt ctgcccgaac
     3961 gccccgcgcc gtaaataatg acggggatca tctgtttttt ggggtgttcg gacaacagtc
     4021 cgcgcaaaac catacgcgag ccggtcacgg aaacaaacag cagtaagaaa tagacaatcg
     4081 gcagggcgag gcgcagcctt tcttcaaaaa tcaatgtgtt gaggaagaac aggacggcgg
     4141 aaacaatgct gcctgccagc gcggtggaga ggatgcggaa gctgacgaag cgtgtaacgg
     4201 cgcggtaaag ccccattcgg ataaataatg tgatggtcag caaggcagtc agcaaaaaag
     4261 actgccagtt ggcaaaatcg aaccattcgt ccgagtagtc ggcctttagg ctttgggtga
     4321 accaaaaggc aatgaaaatc atcagaaaat cgtgtatgag gaaacagatt ttcttgatgt
     4381 tgcgcggcag ggcgatcagg gtttccagag tcatgttgtc ggcggcgtgt atttttcaga
     4441 cggcatatgc cgtctgaatg gttatcgtgt ggcttctgcc aatacggctt cgatgtgttc
     4501 tttgcagaac gcgatttcgt cgtcggtcag cgtcgggtgc accaagaaca tcaggctggt
     4561 gtcgcccagt tcgacagcat ttttcaaacg ctctttcggc cgccaaggcg tgtcgtcgaa
     4621 agatttttcc aaatagactt cggagcagct gccttgatag caggggactt tgcgcgcgtt
     4681 cagttcgctg acgatgcggt cgcgcgtcca gccgtctttg aggtgttcgg gtttgacgaa
     4741 agcgtagaac ttatattgcg cgtgtccgat gtagtcggcg acttcaacca agcggatact
     4801 tttgaatttg cctaggcttt ccgccagctt ggcggcgtgc gcttgacggc aggcagtcca
     4861 ttcgggcagg cgtttgagct ggatgcgccc gattgccgcc tgcatttcca tcatacgcca
     4921 gtttgtgccg aaactttcgt gcagccagcg gaaaccgggc gcgtgttcgc ggtggtacac
     4981 ggcatcgtag cttttgccgt ggtctttgta cgaccacatt ttttcccaca gggttttgtc
     5041 gttggtcgta accatgccgc cttcgccgcc cgtggtcatg attttgtctt ggcagaacga
     5101 ccatgcgccg acgtgtccga tgctgccgac ggatttgcct ttgtatttcg cgccgtgcgc
     5161 ttgggcgcag tcttcgatga cccaaagatt atgttctttt gccaaagcca taatgccgtc
     5221 catttcggcg ggcataccgg cgaggtggac gacgatgacg gctttggtag tcggtgtcag
     5281 cgcggctttg acggtttccg cgctgatgtt ttggctgttc aaatccacat cggcaaacac
     5341 cggatttgcg cccgcgttca caatgcagga cgcggaagcg aggaaggtgc gcgaggtaac
     5401 aatcacatcg tcgcccgcgc ctatgcccat tgctttgagc gcgacatcga gtgccagcgt
     5461 gccgttggca agggcgacgg cgtaccgcgt gccggcaaag gcggcaaatt ctttttcaaa
     5521 ttcgcggcat tcgttgcccg tccagtagtt gactttgttg gacagcagga ctttggaaac
     5581 ggcatcggct tcttcttggg tgaagcaggg ccacggggaa aggaaagtgt tcagcatgat
     5641 ggtttgtccg tcggttttca gacggcattt cctcatttct gccgtctgtt gcttaggctg
     5701 tttattttaa tcgtttacga ccgcagggtc tcggtatttt tgcctgccaa tggctttgcc
     5761 ggattgcccg tgacggtcat gccgtctgaa acgtcgcgca cgacgactgc gcccgctcca
     5821 atggttgcgc ggctgccgat acggatctgc tggcggctgc acgcgcctgt gcctatccag
     5881 ctttcttcgc cgatacgcgt gttgcccgac aggtgcgcgc ccgggctgat gtggacgaaa
     5941 gcatcaagca ggcagtcgtg atcgacggtg gcggcggtgt tcacaatcac gccgtctttc
     6001 aatacgctgc cagcctgtac gacggctttc gccataacga cgctgccttg tccgactgtt
     6061 gcagaaggcg agacggtcgc gtcgggatga atcagaacgg gtagggcgaa gccgagcgcg
     6121 gcggcttttt cggcgatttg gcggcggatg tggttgttgc cgacggcgac ggcgatgtcg
     6181 tattgttcgg gcgataaact gttttcaagt agcagtgtcg tgccgatgac ggaaaagccg
     6241 ttgacgctgc cttgggcgcg gtcgtccaga aaaacgattt cgccgtatgt gccgagtgcg
     6301 gcggcaagct cggcaacgac tttgccgtgt ccgcccgcgc cgacgacggc aagtttgcgt
     6361 tttcctgtga aagtgggcat ggtagcttcg ccctgtgctg aaatcccttc cttgattaat
     6421 acttttttga ctgtcagcag taggattttg atgtcgaggc acaggctgaa gtggtcgata
     6481 taccagatgt cgcatgcgaa gcgttcgtcc catgaggcgg cgttgcgccc gttgacctgc
     6541 gcccagccgg taatgcccgg tttcatttcg tggcggcggt tttggaagtt gtcgtacagc
     6601 ggcagatatt gcatcagcag cgggcgcggg ccgaccaggc tcatctcgcc ttttaagata
     6661 ttccataatt caggcagttc gtccaaactg gcggcacgca gttttttgcc gaacggtgtc
     6721 aggcgttctc cgtcgggcag cggaatgccg tctgaatcaa gcgcgtcgcg catggaacgg
     6781 aatttgacca ttttaaaagg ttttccgtcc tttccggggc gttcctgaaa gaagaagacg
     6841 ggcgaaccta gattcttgcg gatgaggtat atcaaaatca aaaatactgg cgagaggaaa
     6901 atcagtcccg aggcggaggc aacaatgtca aacaggcgtt tgaagaattt actcatgggc
     6961 taatctttca atcaggttga cgattttccg ataggaaatg tcgcgcctga agcggcggac
     7021 gatttcgtcg gactgaacgg ggtcgttttt gcacgccatt tggcaatcga tgatatcgtg
     7081 cccgtgccgc ccaagcctgc catagatgtg gtcaaaacga ttttcataat gggaaacctt
     7141 gttttttcaa ataatgaaac agtttgtgca aatctttccg gtggcgcagg atgcagcctg
     7201 ccagatatgc cgcccatatg ccggcaaaca gggggtagtt tgccggcgtg ccgaagcagg
     7261 tgtaggccgc cgaggaggcc aggcagaaca atgtgtgcag ataaagcggc aggcgtttga
     7321 gcggctgcca caggcggcag gagctttcgg tcttgaaggc aaaaaacagc cagaatgagg
     7381 cggcacaggc aaccgccgcg ccgcgcgcgc cgccggacgg tacggcaagc cccagcagca
     7441 gcaggtttgc cgccagcgcg cccaaggtgg cgagcgcgat cgggcgtgtt tttcggacga
     7501 cgttcaaacc gatgccgctg atttctacca gcgtgcaaaa cagcggcggc agcatacacg
     7561 atacgacgat aaaccggacg gcggcgtagt tttccggcag caggagggag gcgaggggcg
     7621 agaaaatgcc ggtcaggcag acggcggcgg caagcagggc ggaggcagat tctgccgttg
     7681 ccgagaggcg ggcggggtgt ttgcttcgat tgcgcggaaa atatacggtg tccagaccgt
     7741 tgaaaagatg ctttggaaca ataatgccgc cccgccgaac gaaataccca tcgaataaac
     7801 gccgagctgt tctaggccgg catatttttt caggaacaaa cggtcggcgg atgccagccc
     7861 ccaataggcg atgctgctta gtgcgatcgg tatgccgtag cgcaggccgc gatgcaggac
     7921 ggcggatgaa aacggtgcgc gccggacggc cttcagacgg catcggtttt gaaacagcaa
     7981 aaaggcggcg gcggcaaggt ttgccagcgc gtaaacggcg gtcaggacgg cggtgttcgc
     8041 cggaaagtgc agcagcccga ccgtcagcgg cagcagcagc aggatggcga gcttggacac
     8101 gagttgcgcg gacgaaaagg caagggcgcg cccttccata cgcaaaacca gtaagagaaa
     8161 gcggatgggc aggaagctca gttcaaacag caccagcccg atgccggcgg cggcatcgtc
     8221 gagcgaaaac aggatttcag acggcaggga cgggcgggaa agcagcaggg cggctatcgc
     8281 ggcggcagac agcagcggcg gcaggaacag ggttttgaac aaggtgtctt tgtcggcggc
     8341 ggcatagtat tcgcggacgt atgcctgatc cagcccgagg cacaataccg acacagtcag
     8401 tcccgccgcc gtctgcatca gcacgatgcg cccgatgtcg tcggcgggga aataccacga
     8461 cagcagcggc aggatgatga cggctaaaac cgcgctgccg atcgagcctg ccgcgtagcc
     8521 gaggatttct tttgtgtcca tttttgatgt ccgggcggcg gcgggatgct gcctgtgtcg
     8581 tctgaagcct ttcttgatcg gaatttgacg gctttcagac cgtcgcggct gccggcgggg
     8641 tgcggcagtc cgggtcgcgc ttttccgggc gggcggcggt ctgaacgggg ccgtttttta
     8701 tcggcgttat tatatagtga aacggcgcaa accttttaaa aggcgttacc gttttttcgg
     8761 aacacggttt tgatgtcgtg tccgaggatt tcggtggaaa cgggcatcca caagggcggt
     8821 gcggaaaggg cggcgcggtt ttcgggcagg gaaaacaggt ctttgccgct gccgaggatt
     8881 ttgggcgaac ggtacagcac gatttcgtct gccaaatctt ctgccaaaaa tgcagatgtg
     8941 agttcggagc ctgcttcgac tatgagttcc cctatgcctt cgtcggcaag caggcgcatc
     9001 aggctgttca aatcgatttt gccgcctgcc gtttcagacg gcatcaggat gcggacgtgg
     9061 gcgtgtttgc gataggggcg gagtttgtct tcatcgcgtt ccaaggtggc gatgtaggtt
     9121 ggagattgtc cgtcggtcag aaggtggctg tccaagggca ggcgcaggcg gctgtctaaa
     9181 acgatgcgtg cgggttggcg caaagttgga aaagcgcgga cgttgagccg gggattgtcc
     9241 gccaacaccg tgccgatgcc ggtcagcacc gcgcagcttt cggcacgcaa aacctgtacg
     9301 tcggcacgcg cgtcttcgcc ggtaatccaa aagctgctgc cgtctgaaag ggcggttttg
     9361 ccgtccagcg aaacggcgca tttgaggcgg acaaaggggc ggcggcgttc gatgcgcgac
     9421 aggaagcctc ggttgagttc ccttgcctga tgttcgagta aaccgcattc cgtcttgatg
     9481 cctgctgctt cgagcagggc aagccctttg cctgcaacca gcgggttggg gtcgcgcatg
     9541 gcggcaacga cgcgggacac gcccgcccgc accagtgctt cggcgcaggg cggtgtgcgt
     9601 ccgtaatggc tgcatggttc gagggtaaca aaggcggtcg cgccttgagc catttcgccc
     9661 gcctgatgca gggcgtggac ttcggcgtgc ggttcgcccg ctttgacgtg gaagccctgc
     9721 ccgacaactt ggctgccgtg tgcgataacg cagccgacgc gcggattggg cgaagtggaa
     9781 aaacgcccca aagcggcaag tcggagggcg gtttccatca tggatatatc tgtgtccgaa
     9841 aacatgggga taccgtatca gtatgggttg gggagaatca ggctttgcgg tctgttttga
     9901 cggcttgcgc cagccacgag gcaaagtctg ccggattgtc gaagcgtttg tgcagggcgg
     9961 cgaaacggac ggcggcttcc gtatcttgtc ggagcagttc ttttagcacc atgtcggcaa
    10021 gtgcggcaga ggggatgtcg cgctgacccg aagtgtagag cctgtgttcc gtcaggcgga
    10081 cggtttcgtc gatctgttcg ggtgtcaggg cggattttcg ggcggcggcg gtcaggtcgt
    10141 tgcggaggcg ttgtgcatta aagggcgagc gttttttgtc cggaccgatg acggcgggca
    10201 ttttgagttc ggcggtttcg agcgtgccga agcgtttgcc gcagctgggg cagtggcggc
    10261 ggcggcgcac ggcgttgcgt tcttccatca ggcgcgaatc ggcgacgcgg gtgtcggggt
    10321 gggcgcaaaa cgggcatttc atagcgtttc ttcctgatgc cgtctgaacg tcaaaccgat
    10381 acgccggcgg cgcgggcgat ttccagacct tcttcggcac tcatatagac ggggttttcg
    10441 ggacggtcgt gtcggacgat gttgccttcg cggaacatga ccagttcgtc cacggcaagt
    10501 tgggaccatg attcgtcgcg ggtcagcggc agggtggcga taacggcgac gcggtcggag
    10561 ggcgtggtta cttcggcaaa atcgaccatc acgtcgtcgt cgagcaggcg cgccttgccg
    10621 aacggggctt ggcggacgat gtagtgcagc agtgtgctgg cgtgggcaaa cagggcaatg
    10681 ccgtctgaaa gcataaagtt aaacagcccg aacttgcgga tttcgtgcgt cagccccgca
    10741 atcgcgtcaa acagcgtgtc gtcgtcggga cgggcggcaa agcgggtgcg caggcggttg
    10801 aggatgtggc agaacgcgcg ttcggaatcg gttgtgccga cggggtggaa aaattcgccc
    10861 tgttcgggaa aaaaatcaat caaatgtccg ttgtgggcaa acagccagta gccgccccac
    10921 atttcgcgca taaagggatg ggtgttcgcc agcgaggttt gtccttgtga tgctttgcgg
    10981 atatgggcga cgacgttttc cgatttaatc tggtaggcgc gcacgaggtc ggcgacgggc
    11041 gaattggcac tgggtttgtc gtcatggaac aggcgcacgc ctttgccttc gaaaaagccg
    11101 ataccgaaac cgtcggcgtg atggtcggta atgccgccgc gccggcggaa gccttcaaag
    11161 gaaaacataa tatcggtcgg cgtattgcag ttcatgccca gcagttgaca catggtttgt
    11221 ccaaatgatt cagatggtcg caagtattcg gattataccc cgaactgaaa atgccgtctg
    11281 aaatacggct tgttccccat tattccctcg aaaacagaaa acaaagacgg aaacttaaga
    11341 ttccgtcatt cccgcgcagg cgggaatcta gaatttcaat gtctcaagaa tttatcggaa
    11401 aaaaccaaaa cccttccgtc gtcattccca cgaaagtggg aatctagaaa tgaaaagcaa
    11461 cgggaattta tcggaaacga ccgaaaccga a
//
LOCUS       DAWEYF010000059        11302 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.059, whole genome shotgun sequence.
ACCESSION   DAWEYF010000059 DAWEYF010000000
VERSION     DAWEYF010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11302
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.059"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            57..338
                     /locus_tag="WGN93_001065"
     CDS             57..338
                     /locus_tag="WGN93_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ0226980.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(365..1585)
                     /locus_tag="WGN93_001066"
     CDS             complement(365..1585)
                     /locus_tag="WGN93_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ0226981.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSMMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKRQ"
     gene            complement(1600..2025)
                     /locus_tag="WGN93_001067"
     CDS             complement(1600..2025)
                     /locus_tag="WGN93_001067"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226982.1"
                     /translation="MPSEHAAYADLMASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSAGGIAGAAVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            2130..2789
                     /gene="queC"
                     /locus_tag="WGN93_001068"
     CDS             2130..2789
                     /gene="queC"
                     /locus_tag="WGN93_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ0226983.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            2817..3335
                     /locus_tag="WGN93_001069"
     CDS             2817..3335
                     /locus_tag="WGN93_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ0226984.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTKMPSEHTPHLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            3342..3764
                     /gene="queD"
                     /locus_tag="WGN93_001070"
     CDS             3342..3764
                     /gene="queD"
                     /locus_tag="WGN93_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ0226985.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDPVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGG"
     gene            4033..4404
                     /locus_tag="WGN93_001071"
     CDS             4033..4404
                     /locus_tag="WGN93_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ0226986.1"
                     /translation="MKLLFILLVLFVAVEHFYIAWLEMTQIPSEKAAETFKLPYEFME
                     QKRVQTLFSNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            4401..5039
                     /locus_tag="WGN93_001072"
     CDS             4401..5039
                     /locus_tag="WGN93_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ0226987.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGIPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVVAFCENMERK
                     IRARHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(5374..5450)
                     /locus_tag="WGN93_001073"
     tRNA            complement(5374..5450)
                     /locus_tag="WGN93_001073"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5414..5416),aa:Pro,seq:cgg)
     gene            complement(5675..6760)
                     /gene="nagZ"
                     /locus_tag="WGN93_001074"
     CDS             complement(5675..6760)
                     /gene="nagZ"
                     /locus_tag="WGN93_001074"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ0226988.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAVGGIILFRRNFQ
                     NIAQLKELTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGLKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVIQTAD
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            complement(6817..8337)
                     /locus_tag="WGN93_001075"
     CDS             complement(6817..8337)
                     /locus_tag="WGN93_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ0226989.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAIITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            complement(8537..10036)
                     /locus_tag="WGN93_001076"
     CDS             complement(8537..10036)
                     /locus_tag="WGN93_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ0226990.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEASFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            complement(10174..10803)
                     /gene="nth"
                     /locus_tag="WGN93_001077"
     CDS             complement(10174..10803)
                     /gene="nth"
                     /locus_tag="WGN93_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ0226991.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPIADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            complement(10849..11262)
                     /locus_tag="WGN93_001078"
     CDS             complement(10849..11262)
                     /locus_tag="WGN93_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ0226992.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
BASE COUNT         2650 a         3028 c         3152 g         2472 t
ORIGIN      
        1 gttttttcga tacggaaccg gatagaggaa aaatcgaaca ttgcgcctgc cttgctatga
       61 ttcacgaaga aatctccgcc atgcctatgg gctatgaaac cttgatcggc gatatgggca
      121 gcgcactgtc aggcggacaa aaacaacgca tcgtattggc gcgggcctta tattgcgaac
      181 cgaaaatcct atttttagat gcagcgacca gccatttgga tattgccaat gaaaaagcag
      241 tcaatgcaaa cttgaatggc ttgtctatca taaaaattat ggcggcacac agaaaggaaa
      301 cggtggaatc agcagatagg aaaatgtctt taggataaaa atacagtttc aaaaatactc
      361 aagactactg ccgttttttc gcctgagcgt caaactctgc cagcgtcatg ttcaaagtct
      421 gcaaacacgg tgtcattacc gcatcgacag cttggttcac atgatccctt tccacaggca
      481 acggacggta aacgaagagc ttgaagagtt cgttcaactc aatcgaatcc gcccccgttt
      541 tcaacaccca accctgtctg ccggaataga tgtagccgtg ccgcgccagc ttttccaaaa
      601 gctcgcccaa ctcgtcgtag cccatattga tatgccgtct gaactcctga acaggcaagg
      661 ctttgccttc tttttgcgcc gcatccagaa gcagcaggat tttcaacacg tcgtcaaacc
      721 gtccgcgcga gtcgaagccc ctgcggaacg cttctccctg ccagtaggag agtgaagaag
      781 tcagcaccgc gccgcccaag accagcgtcc acaacaggtt cagccacaac agaaaaaacg
      841 gcacggcggc aaacgcgccg taaatcgagc ggtagccgtc gaaattgccc atataccaag
      901 tgaagaggga gcgcgcggtt tccagacaaa acgctgttgc caaagccccg acaaacgcct
      961 gccgcgcggg aacgaagcgg tttggcacga agcggtacag cccccacagc aaaagcgtca
     1021 tgaaggtcag cgtcgccgcc gttcgcaacg cgcccgacca ctgcggcgca cctgaggcaa
     1081 gcgcggcatc ctgtaccgag ccgaccataa aggaaatgcc cacgcccaaa gacagcggcc
     1141 cgaacgtcag taaagcccaa tagacgagaa actgcatcat ccacggacgc tgggaattga
     1201 cccgccagat gcggttgaac gtattgtcta tcgtccgaat cagcatcagc gaggtaacga
     1261 ccagcatcat gctgccgatt gccgtcagcc ggttcgcctg ctcgcggaac gcattgatat
     1321 agtcgaacac catgtccgcg ccctgcggca caatggtttg gttgacgaag gagacgaacg
     1381 aatccgacca gcggtcgaac acggggaaaa tcgaagcgac cgccaccatc acggtcagca
     1441 cggggacgag tgccagcagc gtcgtaaacg tcatgcttgc cgccgcctgc ggtacgcgtt
     1501 cttcatcaaa gcggcggacg acgaaccatg caaacgcaca gattttattg tctgccaaac
     1561 cttgcaaacg ttgtaaaaag gtcataattt cttgcccggt cagtaagttg ggcattgatg
     1621 cccgatgtta tagccaattt tgccgtcagg aacaaatgcc tgaactgcgg ctgtttcaga
     1681 cggcatcgga acaactgtta tgccgtctga agaccgaacc attttaacgg aatccgccca
     1741 tgaacccaaa tccccctcaa aatcctcgtc ctctactatt tccaaaacgg cagcacccgc
     1801 aatcccgccc gccgaatcgc tcgcggcatc gacagcgttg aaggttgcga agccgtattg
     1861 cgcaccgtcc ccaaagtctc cgccgtctgc gaagccgtca aaaaagatat tcccgacagc
     1921 ggctcccgtc ctgaccgccg aagaaaacaa tatcgccttc gcacaaagca aacgcttggc
     1981 ggaactcgcc atcaagtcgg cataagccgc gtgttcagac ggcatggcgt tcagatgccg
     2041 tctgaacgcg tttgcctgta taatccgcgt ctttactgtc caacttcgcg gttcgcaaac
     2101 ctcccgcgtt accaaaacta ggattcgata tgtcaaacca aaaagccttg gtcatctttt
     2161 cgggcggtca ggattcgacc acctgcctga ttcaggcaat ccaaatctac gggcgcgaaa
     2221 acgtccaagc cattactttc caatacgggc aacgccatgc cgtcgagctg gaacgtgccc
     2281 gctggattgc gcaggatttg ggcgtcaaac aaaccgtact cgacttgagc ctgatgcggc
     2341 agattacgca caatgccctg atggacgaca ccgccgccat cgaaactgcc gaaaacggcg
     2401 ttccgaatac ctttgtagac ggccgcaacg cgcttttcct gctttacgcc gcgatttacg
     2461 ccaaagggca ggggatacgg cacatcatcg cgggcgtgtg cgaaaccgac ttctccggct
     2521 atcccgactg ccgcgacgtg tttgtcaaat cgatgaacgt tacccttaat ttggcgatgg
     2581 actatgattt tcaaatccac acgccgctga tgtatctgac caaggcgcaa acgtgggcgt
     2641 tggcggacga aatgggcgtg ctggactata tccgcgagca aacccacacc tgctataacg
     2701 gcatcgtcgg cggctgccgc gaatgcccga gctgtatctt gcgcgaacgc gggctggcgg
     2761 aatatctgga aagtaaaaag gccgtctgaa cacgcgcaaa ccataaggaa tacgatatgc
     2821 ccaagctcca tatgttttac ctcggcggca atgccggcag gtcgaatatc gaagtgcacg
     2881 acatccaatt tgccgtgtgc gacgactacc gtgaagccgt ccccgcactc aaagccgcgt
     2941 ggttcggcga tgcggacaaa atccacatcg acggctggca ggttgtcgaa tgggcggacg
     3001 gttacgacat cgccgtatcc gaaacgccca aaacgaaaat gccgtctgaa cacactccgc
     3061 acctgtattt tgccaatgtc ggcggttatc gcgcagggca gctcgccgaa gcgcacgctt
     3121 ttgggctgtt cgccgccgcc acgcctgccg aagccaaaca aaaagccctg caaaccctgt
     3181 tgaccgacag ctatgttcag caacataaag acaacttaaa agacgtggac aacctgcttg
     3241 cgctcgaccg catcggcaat ttccatatcc gcctgacccc gaatccgcac ggcaaacccg
     3301 ccgaaatcgg ctttcaaggc tatttgccca tttgagaacc catgaaaatc accaaaatct
     3361 tcaccttcga ctcctcgcat atgctcgacg ggcatgacgg caaatgccaa aacctgcacg
     3421 ggcataccta caaactcgaa atcaccgttt cagacgaccc cgtcagaggc gggccgaaag
     3481 acggtatggt gatggacttt accgacttga aagccattgt caaacaacac attaccgacc
     3541 ccttcgacca cgccttcatc taccacggcg gcaacgggcg cgaatctcaa atcgccgcac
     3601 tcttggaagg ctggaacatg aaaaccctgc gcctgccctg ccgcaccact gccgaaaata
     3661 tggcggtcga aatgtacgac cgtctgaaaa acgcggggct gaacgtgtgc cgcgtcaaat
     3721 tgtgggaaac gccgacatcg tgtgcggagt atgaaggggg gtaggggata gtttgaacgt
     3781 atcgatatag tgaatttgaa taaaacttgc cctaagccgt cattcccgcg caggcgggaa
     3841 tccagacctt ggtttttcag gaatatttaa aaattgcagc aattccaact ctctggattc
     3901 ccgcctgcgc ggaaaggacg gtttagagcg tccttatttg aatttaccgt aaaacggttt
     3961 tttctcctgt acggattccc cgttttttca gacgaccttc catatcaaat acacccatta
     4021 aaaggaatac ccatgaaact cctcttcatc ctcctagtcc tcttcgtcgc cgtcgaacat
     4081 ttctacatcg cctggcttga aatgacacag attcccagcg aaaaagcggc ggaaacgttc
     4141 aagctgcctt atgaatttat ggaacaaaag cgcgtgcaga ccctgttcag taaccaaggg
     4201 ctgtacaacg gctttctcgg catcgggctg gtgtggtcgc ggtttgccgc gccggataac
     4261 gcggtgtacg gcgcgacggt actgtttctc ggcttcgtcc tgattgccgc cgcgtggggc
     4321 gcgttctctt ccggcaacaa aggcatactc gtcaaacaag gtttgcccgc atttttggca
     4381 gcggcggcgg tgttggcggt atgaaaaaaa tcaatgttgc ccccgaaaat ccccaatacc
     4441 gcatcgtcga aatctttgaa agcctgcaag gcgaaggctg gaacacgggc atacccgccg
     4501 ttttcgtccg cttgggcaaa tgcaacctcg cctgcggctg gtgtgatacc gattatttga
     4561 cattcggcat gatgagcctg tccgacatct taggctgtct gaaaacctat gccgcccgca
     4621 acatcatcat caccggcggc gaaccgacca tccagccgca tctcgatatg ctgctggaca
     4681 tgctcaaggc ggaaggttat ttcctctgta tcgaaaccaa cggactcaat cccgcgccgc
     4741 cgcaaatcga ctatgtcgcc accagcccca aagcctgcta tgccgccaaa tacgaaaaaa
     4801 gctgtatcga aacagccgac gaagtgcgca tcgtggcaga cggcgatgtc gttgcgttct
     4861 gcgaaaatat ggaacgcaaa atccgtgcgc gccattacta cctttcgccc tgtgagcaag
     4921 acggtgcgat gaacatctac gacaccatcc gccaaatcgg tattttaaac agtcgccccg
     4981 acgcatccgt gcattggcag ttgagcgtgc agacgcacaa atgggcggga atagagtagt
     5041 ttaagcagtg taactcaaag ggacggcgta cggttttacc gatgtttgac atacggggaa
     5101 agtgtgccgc ttctgcgtgg aaatgccggc atttccaccg cccaatcagg acggagcctt
     5161 actgaataag atgctgccgt tgggtacaag cccggcttcc taaattccga tggtcttttg
     5221 aaccttgccg atactctgtg ccagtgcgcg caaatggcag ggttagggaa aacgaaatgc
     5281 cgtctgaaac agcattctgt ttcagacggc atttttctgt tgacgccaaa aggcaaaacc
     5341 gctccggcaa tagatgccga ggcggtttgg atttggtcgg aatgagagga ttcgaacctc
     5401 cgaccccttc gtcccgaacg aagtgcgcta ccgggctgcg ctacattccg aattaagtaa
     5461 ggcgtgatta tagcgcaaaa aatacggcat gcctataccg ttttgccttt ttgccgcgtg
     5521 tcgggcggat tgaaagggct gtgtttgaat acagtgttga taagcatcct tatctccaag
     5581 taattcaata agataacttt ctacctgacc gaaaaaatca ttgcctttcc ctgacaaacg
     5641 gttgaaatcg gcagattgtt gaaacgcagc cgatttaaaa ggcctctccg acttttacgc
     5701 cgcccgccgt gtcttgcggc gaggcaagac cggcaacaaa ggcttgcgcc gcttggaaat
     5761 ccgccgtctg tataacggct tgcgcggcgg cactgccgag cgtgttggcc atatattgcc
     5821 aacgttgcgc caaagcggga ttgtcaggaa tgcggaaatc ttcgcgcagt tcgtccacaa
     5881 ggtcgggacg gttgcagacg aggacgatgt cgcaacctgc ctcaaaggaa atgcgggcgc
     5941 gttctttgag gccgccgaca ccgcacgcgc cctccatagt caaatcgtcc gagaaaatca
     6001 cgcctttgaa tccgatatcg cggcgcaaaa tttgtttgag ccagatttcg gaaaaccctg
     6061 cgggctttgt gtccacttgt ggataaacga cgtgggcggg cataaccgcc gccatacctt
     6121 cgcggctcat aatgtggaag ggggcgaggt cggcggcttc gagttcggac aggctgcgcc
     6181 tgtcttccgg caagaccaga tggctgtctc cttcgacaaa tccgtgtccg ggaaaatgtt
     6241 tgccgcagga tttcataccg ccttttgcca aacctttttg aagggcgagg gcgaggtggg
     6301 cgaccgcttc gggattgtgg tggaaactgc ggttgccgat gacggggcag tttccccagt
     6361 ccaaatctaa gactggcgtg aaggacaaat cgatgccgca ggcggaaagc tcggttgcca
     6421 acacccggcc gacttgtccg gcggcggttt cggcggcgga cgcgccgtct ttgtcccaaa
     6481 tttgccctaa aacgttcatt gcgggcaggc gggtgaagcc ttcgatgaaa cgttgcaccc
     6541 tgccgccttc gtgatcgacg gcgataatga gttcgggtgt gcgcagggct ttgatttcgg
     6601 cggtgagttc tttgagctgt gcgatatttt ggaagttgcg gcggaagagg atgatgccgc
     6661 ctacggcggg atcgagcagg cgttgctttt cctcttcggt caggcggaag gcggcaatgt
     6721 ctgccatgac ggggccgcgc ggaatatggg gaacagtcat ttcggtttgc tccaaaaagc
     6781 ttcagacggc atatgccgtc tgaacaggga aaggggtcag gcgttggcgc gttttttatc
     6841 tttcaacaga aaaatcagca ccgccaatac aatgcctgtc gtgccaaagc ccaacagcgc
     6901 ggattttgtc agacccaatg cgaggtagcc cgatgcggcg gcggcggcaa cggttaaggc
     6961 gtaaggcagt tgcgaggtaa cgtggtcgat gtggttgcag cgcgctccgg tggacgacag
     7021 gatggtcgtg tcggaaatgg gcgagcagtg gtcgccgcat accgcccccg ccattactgc
     7081 ggacatacac gggataatca gcgcgggttc gactttgacc gccatggcgg cggcaatcgg
     7141 cagcataatg ccgaacgtcc cccagcttgt gcctgtggca aacgccatca cgctggcgag
     7201 caggaagagg atgacgggca ggaagccggg atggatgttg cccgcaacca gtgtggagag
     7261 gtaatcgccg gtgtgcattt cgccgacaac cgtactgatg agccaagcga ggattaaaat
     7321 ggcgattgcg ccgaacatag atttcgcacc ctgccaaacg gctttgggat agtcggcggt
     7381 tttaatcgtg ccgagcgtgc agagaacgac ggcaaggacg ccgcaagtgc cgccgaatac
     7441 cagcgaagtg tttacgtccg tgttttcaaa tgcccccaaa atgctgaagg tttcgcttgc
     7501 ctgcgcgccg gtgtagatca tggcggaaac cgttgaggcg attaaggcca aaacgggaat
     7561 aatcagtgcg taaacacgac ctttggtagc gtctgaaacg gcagtttcat cgtgggcttc
     7621 gttcaacgcg gcttgttcga aacgtgccat cgagccgatg tcgaaggaaa accatgcgac
     7681 gacgaacacc ataatcaggg caaacagtgc gtaatagttc atcaggctca tggcgacaaa
     7741 cgtccccatc ggcgtgtatt cggtgatttt gtaggtaacg agcagtccgg caagcgtggc
     7801 gataatcgac gcgccccagc ttgaaacggg catcagcacg cacataggcg cggcagtgga
     7861 gtcgaggatg taggcgagtt tggcgcggga aactttaaac ttgtcggtaa cggggcgggc
     7921 aatcgcaccg acggcgagac tgtggaaata gtcgtcgata aaggttacga acacgaggca
     7981 ggcggtcagc attttcgcgc cgcgccggtt tttaatgtgc cgttttgccc agtcggcaaa
     8041 cgcctgattg ctgccggagt aggtcagcag ggaagtaaaa atacccaaaa gtatcaggaa
     8101 aaccaagatt tttggtttgc ccagcgacca atcgccgtct gaccaagcca agccgacgac
     8161 catgtctttc aggtgtgtca gaccgtcgac ggggttgccg ccgaccaaaa aggcaacgcc
     8221 gaccagaata ccgatgccta aagacagcag tacgcggcgg gtaatgatgg caagtgccag
     8281 tgccaaaaag ggtggcacaa ccgagaaaaa tgaatgtgaa tagtcgatca gctgcatggt
     8341 tatgggggtg ttaagcgtcc ggatggggcg gtttctgtcc gcaacggttc ggattttgtt
     8401 ggcaaaatgg gcgaaagtat tttctgttcc ggaaaatact tatttgaaat caattaactg
     8461 attttttaaa atgcccgtta atcggtattg acgggcattt tatcatttaa aaaatatttt
     8521 ggttaaatta tgtgggttat tgcaggttta atgcgataaa cagcgtgttg ccacggcgca
     8581 tgaccagcag ggggacgttt ttgcctgcct tgtccatagc tttgcggaaa ctggcttcgt
     8641 cattgacggg gacttgcccg acggcgagga tttcgtcgcc gcgcctcaag cctgcgcgtt
     8701 ctgccgcgtc ggaaacccgt acgacgacga ggtgtccgcc gctgctgtcg gtatgtgtct
     8761 gaagggtaat gcctgcggat tcgaccgaga acgtaccgga ttgctgttcg gtgtaggggg
     8821 cttcatctgt tttggatgat gcgccgatat gctcggcggc gttgcccagc ttgactttga
     8881 ttgtgatttc ttcgcctttg cgccatacgc cgaggctgac ttcttttccc ggcgtaatgg
     8941 cgccgaccat aacgggaagg tcgccggaag aacgtatttc tccgccgtcg aggctgagga
     9001 cgatgtcgcc cgcctgcagg ccggcacgtt ctgcggggct gccgggcagg attttggcaa
     9061 tcagtgcgcc gccggctttg tccaaaccga acgattgtgc caaaccgtag gatacttctt
     9121 gaataatcac gcccagttgt ccgcgttgga ctttgccggt gtttttcagc tgttcggcga
     9181 cattcatggc aacgtcaatc gggatggcga aggaaatgcc catgaatccg ccgctgcggc
     9241 tgtatatttg cgagttgatg ccgacgacct gtccttttaa gttgaacagc gggccgccgg
     9301 agttgcccgg attgatggca acgtcggttt ggatgaaagg tgtgtagctt tcgttgggca
     9361 ggcttctgcc tttggcggac acgatgccgg cggtcacgct gttgtcgaag ccgaagggcg
     9421 cgccgatggc ggcgacccat tcgcccggtt tcaaatcttt gggattgccg attttgacga
     9481 cgggcagctc ttccgttgca tcgattttca gaagggcgac atcggattgg acatccgagc
     9541 cgatgagctt ggcggtatat tcgcgcttgt cgttgagcag gactttgata ctgcccatgc
     9601 cggtaacgac gtgcgtattg gtcagaatat agccgtcttt gctgatgatg aagcccgaac
     9661 cgaagttcaa tccgccgtca tctgcttctt cttgggggat ttcgggcatg ttcgggacga
     9721 ggcgtttgaa aaattcgtag aacgggtcgc tgtcggcaag cgggtcggaa tcggtttcgg
     9781 cattgccgct gccgttttgg gtgcgcgggg cgggggctgc ctgaatattg acgactgccg
     9841 ggccttcgct ttgaaccagt tggacaaagt cgggcagcag catactgacg ctgccgtcgt
     9901 ctttggtgtg ttcgatgcgt tctacgaagg atgcttcttt tttgtccgca ccgaaaaagc
     9961 tgccggcttt gtcgcagcct gccagcgagg cggcacacag tgctgccaaa gcgaggtatt
    10021 ggtatttttt gaacacgttt tgtcctttgt cggatgccgg taccggcttt aatgccgtct
    10081 gaagcgcatt ttgtcggctt cagacggcat aggttgaaat tctacaacgt ccgtccgaat
    10141 tttcaagcgt ttcattttga agggcggcgg cggtcaggct ttggcgggat attcgcacaa
    10201 atcgttgatg atgcaggttt ggcattgcgg tttgagcgcc ttgcaggtgt agcgtccgtg
    10261 caaaatcagc cagtggtgcg cgtccatcag aaattctttg gggatgaagc gcatcagttt
    10321 gtcttcgact tcgcgcacgt ctttccccgg cgcgattttg gttcggttgg acactcggaa
    10381 aatatgcgta tcgactgcca taacgggatg tccgaacgcc gtgttcaata ccacgtttgc
    10441 cgttttgcgc cccacgcccg gcaaggattc caaagcctcg cggtcttccg gcacttcgcc
    10501 cttgtatttt tccagcagga tgcggcaggt ctgcataatg tgtttggatt tggttttata
    10561 caacccgatg gttttcgtgt attccatcac gccgtccaaa cccaaatcca gcatcgcttg
    10621 cggcgtatcg gcaatcggaa acagcttcgc cgtcgccttg tttacgccga catcggtcgc
    10681 ctgcgccgaa agcagaacgg cgattaaaag ctcgaaaggg gagttgaaat tcagctcggt
    10741 ggtcggatgg gggttggcgg cgcggaagcg ttcgaaaatt tcttggcgga tgtgtctgtt
    10801 catttttttg tgcagtcggt ttgtgcggtc ggcattataa cgcacggttc aggcggcgta
    10861 atattgcatt ccccacagaa tgaaggcgta acgcgccgtt ttgccgataa ccagcatcag
    10921 cccgcttgtc cacggattca accgcagcca gccggcggca agcggcagtg cgtcgccgac
    10981 gacgggcagc caggcaaacg gaagcagcca aataccgaaa cgccgcatca gattcagtgt
    11041 tttttcagac ggcatttttc gggaaggcag caaacgtccc atccaatagg aaaccatact
    11101 gcccaatccg ttggcaaggc cggcgcacag caacgcgccg tatgcgtgtt cgggaaagcg
    11161 gcggacgaac agggcaaagg cggcttcgga tgtgccgggc aggagggtgg cggaagtgaa
    11221 ggcggaaaag gcgagggcgg cgtaggtgta ggagggtatc attgcaaaca gtctcaaaca
    11281 ggtaacaatc ggcgacggat tg
//
LOCUS       DAWEYF010000060        10981 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.060, whole genome shotgun sequence.
ACCESSION   DAWEYF010000060 DAWEYF010000000
VERSION     DAWEYF010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10981
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.060"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(14..604)
                     /locus_tag="WGN93_001079"
     CDS             complement(14..604)
                     /locus_tag="WGN93_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ0226993.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
     gene            complement(665..1246)
                     /locus_tag="WGN93_001080"
     CDS             complement(665..1246)
                     /locus_tag="WGN93_001080"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ0226994.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAELYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            1324..1557
                     /locus_tag="WGN93_001081"
     CDS             1324..1557
                     /locus_tag="WGN93_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0226995.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFT
                     ITVRRRNHLMRQQEQAESEQQRAQRQKDSGTKP"
     gene            1730..2458
                     /gene="rpsB"
                     /locus_tag="WGN93_001082"
     CDS             1730..2458
                     /gene="rpsB"
                     /locus_tag="WGN93_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ0226996.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            2587..3441
                     /locus_tag="WGN93_001083"
     CDS             2587..3441
                     /locus_tag="WGN93_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ0226997.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPATVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            3658..4377
                     /locus_tag="WGN93_001084"
     CDS             3658..4377
                     /locus_tag="WGN93_001084"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ0226998.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            4561..5523
                     /gene="mafA"
                     /locus_tag="WGN93_001085"
     CDS             4561..5523
                     /gene="mafA"
                     /locus_tag="WGN93_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ0226999.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIQPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            5563..7008
                     /gene="mafB"
                     /locus_tag="WGN93_001086"
     CDS             5563..7008
                     /gene="mafB"
                     /locus_tag="WGN93_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ0227000.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     SGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYHIKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WANRMDDVRGIVQGAANPFLTGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAAATALQDSAFAVKDSINSARQWADAHPNITATAQTALSVAEAAGTVWRGKKV
                     ELNPTKWDWVKNNGYKKPAVRLMQTVDGEMAGGNKPPKPSTQQHSTHSDNNIGLPAPY
                     VKPDTSISPTGTIYVDSKGNAIPTPIGGYITGSPDARFIQVRDSNGNLTGARIDDAHH
                     ANTHQDPRALTGHAHVPGVTNDDGTPWLPIK"
     gene            6974..7357
                     /locus_tag="WGN93_001087"
     CDS             6974..7357
                     /locus_tag="WGN93_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227001.1"
                     /translation="MMTEPHGYPSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYYWLGFDELPQSEKIKFLNYLNILSIHKEIQDKTVNRVYTDCFDIDKLHSLGRI
                     TTNECINGIKKIYQKNKLEFDNILK"
     gene            7574..8290
                     /locus_tag="WGN93_001088"
                     /pseudo
     CDS             7574..8290
                     /locus_tag="WGN93_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            8295..8654
                     /locus_tag="WGN93_001089"
     CDS             8295..8654
                     /locus_tag="WGN93_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ0227002.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            8730..8942
                     /locus_tag="WGN93_001090"
     CDS             8730..8942
                     /locus_tag="WGN93_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227003.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            9039..9884
                     /gene="mafB"
                     /locus_tag="WGN93_001091"
                     /pseudo
     CDS             9039..9884
                     /gene="mafB"
                     /locus_tag="WGN93_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            9894..10100
                     /locus_tag="WGN93_001092"
     CDS             9894..10100
                     /locus_tag="WGN93_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227004.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            10232..10483
                     /locus_tag="WGN93_001093"
     CDS             10232..10483
                     /locus_tag="WGN93_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227005.1"
                     /translation="MDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            10480..10851
                     /locus_tag="WGN93_001094"
     CDS             10480..10851
                     /locus_tag="WGN93_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ0227006.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
BASE COUNT         3382 a         2516 c         2392 g         2691 t
ORIGIN      
        1 tgaaaatact gcctcacacc tgcacgccat accctgccaa cctgccggtc aggatttccc
       61 tgtttttgca ccaatcttcc ctcagcatac tgtacacgac cgtatcgcgc acactgccgt
      121 ctttacggag catatgcata cgcagcacgc cgtctttttc cgcacccagc cgttcgatgg
      181 cacgttgcga ggcaaggttc agaatatccg tgcgccatcc cacgcaacgg caagccaaaa
      241 catcaaatgc gtaatccaac agcatgattt tgcaacaggt gtttatccgt gtccgccgtg
      301 ccgatgccgc ataccatgtg aatccaatat ccaaacgcgg aatctgcggt tcaaaatgat
      361 aatacgccgt tgtcccgacc accctgcccg cctcttcatc gacaaccgca aacgccaaac
      421 gcgttgccaa tgctgtcccg atatagtctg ccaccctatc cggatggggc gcggacgtta
      481 ctcccagctt ccaaacttcc ccatcgcaaa ccgcctcgcg caaacccgtt tcatgatgca
      541 catccaacgg ttcgagccgt acgccaccca acgacaagac cggcagtatt atcttttccg
      601 acatcctttt ctcccaatat tccaccttca gacggcattt ccgttcaaaa tgccgtctga
      661 acggctaaaa acacaatatc cccgcctccg acacaaaacc gtccagcggc aggtcgtgcg
      721 cctcgaccga cagtctgtcc accaactggc aggcaaagcc cacgcccacg gtttttgcct
      781 gcaaacggta tttcatcgct gcaagcgtcg catcgtaata gccgcctgcc tgccccaaac
      841 ggtagccttc gcggtctatg ccgacaagcg gaacgagcaa taccgacaaa ccgtgcacgc
      901 ggattttgcg ccctgcaaac tgcggcacgt tcaacctcgc cctgccccgt atgcgctccc
      961 gttccattcc gctttcagga tacggcgtaa accacatccg ccgcgaacgc ggttcgatat
     1021 aaggcaggta gagttccgca ccgcgttttt gcgccgcgcg gacaaagccg tccaaacgca
     1081 attccttgcc catcggccaa tacacgccga ttttccgccc ttttttaata taacgtttga
     1141 gcaggtggtt gatttttacc gttgccgccg cccgcacgtc ccgccccatt tgcgaacgcc
     1201 gcccgcgcaa ttcgcggcgc agggcgcgtt tttcctcatt cctcatttca gacggccttt
     1261 caggattgcg gtagaatgtt gcgattataa cgattttgtt aacattcaaa caggacgcac
     1321 acaatgtggc acatcgtcgc catcggctat ctttttgttg ccgttatgta ttccgccgcg
     1381 cagccgagta ttgcgcgcgc cttgatttat ttggtttttt gggcggtgct gcccaccgtg
     1441 ttcacggttt tcaccattac cgtccgccgc cgcaaccacc tgatgaggca gcaggaacag
     1501 gcggaatccg aacagcagcg cgcacaacgg caaaaagaca gcggcacaaa accctgaatc
     1561 ccttttcaga cggcatctta tccgctataa tccgtcagtt ttccatttcg gaaacacact
     1621 attttttaaa acttatgccc actttcgccg aagggtgctt gacaataggc gtgacctatc
     1681 aagttctatg cgattgaatg tgtgctctta accctttcaa ggaaataaaa tgtctcaaat
     1741 tactatgcgt cagatgattg aagccggtgt tcacttcggc caccaaaccc gtttctggaa
     1801 cccgaaaatg gcacaataca ttttcggtgc gcgcaacaaa atccatatcg taaacttgga
     1861 aaaaaccctg ccgatgttcc aagacgcgca agaagccgta cgccgtttgg ttgccaacaa
     1921 aggtacagta ttgttcgtag gtaccaaacg ccaagcccgc gacatcatcc gcgaagaagc
     1981 gacccgtgcc ggtatgcctt tcgttgatta ccgctggttg ggcggtatgc tgaccaacta
     2041 caaaaccgtt aagcaatcca tcaaacgcct ggaagaaaaa accgcagcct tggaaaatgc
     2101 tgccgaaagc ggtttcagca aaaaagaaat tctggaaatg caacgcgatg ttgaaaaact
     2161 ggaacgttct ttgggcggta tcaaaaacat gaaaggcctg cctgacgcga ttttcgttat
     2221 cgataccggc taccaaaaag gtactctggt tgaagctgaa aaattgggca tccctgttat
     2281 cgccgtagtc gataccaaca acagccccga cggcgtgaaa tacgttatcc ccggcaacga
     2341 cgactccgcc aaagccatcc gcctgtactg ccgcggcatc gctgacgcag ttttggaagg
     2401 caaaaaccaa gcgctgcaag aaaccgtagc cgctgcccaa gaagccgctg ccgagtaatc
     2461 cggcaaaccg aagaggggcg ttatgcccct tttctcaaat atgccgtctg aacgtccgtt
     2521 cgcggcacac gattcccgaa tgcggaaaat cctttccgta tttcccaaaa atctaggaga
     2581 ttcaaaatgg cagaaattac tgcaaaaatg gttgccgatc tgcgcgccgc taccggcctg
     2641 ggcatgatgg aatgcaaaaa agccttggtt gaagccgaag gcaacttcga caaagccgaa
     2701 gaaatcctgc gtatcaaatc cggtgcgaaa gccggtaaac tggccggccg taccgctgcc
     2761 gaaggcgtat tggcttacgc gatcaacggc aatgtcggcg cattggtcga agtaaactgc
     2821 gaaaccgact tcgtcgcgaa agacgccggc ttcgtagaat ttgccaactt cgttgctaaa
     2881 actgctgccg agaaaaaacc ggctaccgtt gaagaactga gcgaactggt tgaagcagaa
     2941 cgcaaagcca tcatcgctaa attgggcgag aacatgtctg tccgtcgctt ccaagtgatc
     3001 gacactgcca accaactggt tgcctacatc cacggcgcat tggcgaccga aggcgtattg
     3061 gttgagtaca aaggctctga agacgtagca cgcaaaatcg gtatgcacat tgttgccgct
     3121 aaaccacaat gcgtaagcga agccgaagta gatgccgaaa ccgttgaaaa agaacgccac
     3181 atctacaccg aacaagccat cgcttccggc aaacctgccg acatcgccgc taaaatggtt
     3241 gaaggccgta tccgcaaatt cttggctgaa atcactctga acggccaagc attcgtgatg
     3301 aaccccgatc aaactgttgc ccaattcgcc aaagaaaacg gcactgaagt ggtcagcttc
     3361 gtccgctaca aagtaggcga tggcatcgaa aaagccgttg tcgactacgc agccgaagta
     3421 gccgcagccg ccaaagtgta aggcacttat gaaaaagaaa gcacctggat tccaaacgaa
     3481 tcagggtgct tttttttgag aaaaccgttt gcggtaccta ttttaagacg accgaatatt
     3541 cagaccgtct taaaacaaaa caataataaa ccgacacacc ctatcattaa tattccgacc
     3601 gttggaaatt cagacggccc aactccgacc gacgacattc aagaaagcaa ggtatccatg
     3661 acacagcaaa tcaaatacaa acgcgtatta ctgaaactct ccggcgaatc cctgatgggt
     3721 tccgatccgt tcggcatcaa tcacgatacc atcgttcaaa ctgtcggcga aattgccgaa
     3781 gtcgttaaaa tgggcgtgca agtcggtatt gttgtcggcg gcggcaatat tttccggggc
     3841 gtatccgccc aagcaggcag catggatcgc gccaccgccg actacatggg catgatggcg
     3901 accgtgatga acgcgttggc actcaaagac gcatttgaaa ctttaggcat caaagcgcgc
     3961 gtacaatccg cactgtctat gcagcaaatc gctgaaacct acgcccgccc caaagccatc
     4021 caatatttgg aagaaggcaa agtcgtgatt tttgccgccg gtaccggtaa cccgttcttc
     4081 acgaccgaca ctgccgccgc attgcgcggt gcggaaatga actgcgacgt gatgctcaaa
     4141 gccaccaacg ttgacggcgt gtacaccgca gaccccaaaa aagactcatc cgccacgcgc
     4201 tacgaaacca ttacttttga cgaagccttg ttgaaaaacc tcaaagtgat ggatgccacc
     4261 gctttcgccc tctgccgcga acgcaagctc aatattgtcg tattcggcat tgctaaagaa
     4321 ggctcgctca aacgtgtagt aaccggtgaa aacgaaggta cgctggttca ctgctgattg
     4381 accatagtgt cggcagatat agtcgcatat gggcttcaga cagccattta ttatatggag
     4441 attatagtgg attaaattta aaccagtacg gcgttgcctc gccttgccgt actggtttaa
     4501 atttaatcca ctatatttac aattttgata caatttgttt ttcatcaaag gagaaaatct
     4561 atgcaagcac ggctgctgat acctattctt ttttcagttt ttattttatc cgcctgcggg
     4621 acactgacag gtattccatc gcatggcgga ggtaaacgct ttgcggtcga acaagaactt
     4681 gtggccgctt ctgccagagc tgccgttaaa gacatggatt tacaggcatt acacggacga
     4741 aaagttgcat tgtacattgc aactatgggc gaccaaggtt caggcagttt gacagggggt
     4801 cgctactcca ttgatgcact gattcgtggc gaatacataa acagccctgc cgtccgtacc
     4861 gattacacct atccacgtta cgaaaccacc gctgaaacaa catcaggcgg tttgacaggt
     4921 ttaaccactt ctttatctac acttaatgcc cctgcactct ctcgcaccca atcagacggt
     4981 agcggaagta aaagcagtct gggcttaaat attggcggga tgggggatta tcgaaatgaa
     5041 accttgacga ctaacccgcg cgacactgcc tttctttccc acttggtaca gaccgtattt
     5101 ttcctgcgcg gcatagacgt tgtttctcct gccaatgccg atacggatgt gtttattaac
     5161 atcgacgtat tcggaacgat acgcaacaga accgaaatgc acctatacaa tgccgaaaca
     5221 ctgaaagccc aaacaaaact ggaatatttc gcagtagaca gaaccaataa aaaattgctc
     5281 atcaaaccaa aaaccaatgc gtttgaagct gcctataaag aaaattacgc attgtggatg
     5341 ggaccgtata aagtaagcaa aggaattaaa ccgacagaag gattaatggt cgatttctcc
     5401 gatatccaac catacggcaa tcatacgggt aactccgccc catccgtaga gactgataac
     5461 agtcatgagg ggtatggata cagcgatgaa gtagtgcgac aacatagaca agggcaacct
     5521 tgattcacac gaccataacc gcttgctacc aaggaaaaca aaatgaattt gcctattcaa
     5581 aaattcatga tgctgtttgc agcagcaata tcgttgctgc aaatccccat tagtcatgcg
     5641 aacggtttgg atgcccgttt gcgcgatgat atgcaggcaa aacactacga accgagtggc
     5701 aaataccatc tgttcggcga tggtcgcggc agtgttaaaa atcgggttta cgccgtccaa
     5761 acatttgatg caactgcggt cggccccata ctgcctatta cacacgaacg gacaggattt
     5821 gaaggtgtta tcggttatga aacccatttt tcagggcacg gacatgaagt acacagtccg
     5881 ttcgatcatc atgattcaaa aagcacttct gatttcagcg gcggtgtaga cggcggtttt
     5941 actgtttacc aacttcatcg aacagggtcg gaaattcatc cggaggatgg atatgacgga
     6001 ccgcaaggca gcgattatcc gccccccgga ggagcaaggg atatatacag ttaccatatc
     6061 aaaggaactt caacaaaaac aaagactaat attgtccctc aagccccatt ttcagaccgt
     6121 tggctaaaag aaaatgccgg tgccgcctct ggttttttca gccgtgcgga tgaagcagga
     6181 aaactgatat gggaaagcga ccccaataaa aattggtggg ctaaccgtat ggatgatgtt
     6241 cgcggcatcg tccaaggtgc agccaatcct tttctaacgg gttttcaggg attgggagtt
     6301 ggggcaatta cagacagtgc ggtaaacccg gtaacctatg cggcagcacg gaaaacttta
     6361 cagggtattc acaatttagg aaatttaagt ccggaagcac aacttgcggc cgcaaccgca
     6421 ttacaagaca gtgcttttgc ggtaaaagac agtatcaact ctgccagaca atgggctgat
     6481 gcccatccga acattacagc tactgcccaa actgcccttt ccgtagcaga ggctgcaggt
     6541 acggtttgga gaggtaaaaa agtagaactt aacccgacca aatgggattg ggttaaaaat
     6601 aacggctata aaaaacctgc tgttcgcctt atgcagactg tagacgggga gatggctggg
     6661 ggaaataagc caccgaaacc aagtacgcag caacactcta cacactctga taacaatata
     6721 ggcttacctg ccccatatgt taaacctgat acatctattt ctccgacagg aacaatttat
     6781 gtagacagca aaggaaatgc aataccaaca ccaataggcg gttatataac aggttcgcct
     6841 gatgctcgtt ttatccaagt ccgagatagt aatggaaact tgactggagc cagaatagat
     6901 gatgctcatc atgcaaatac ccatcaagac ccacgcgcac ttacaggaca cgcacatgta
     6961 ccaggagtta caaatgatga cggaacccca tggttaccca tcaaataatt tacctgttaa
     7021 aatcataaat gatattattt atgcaaccca gttagttgaa gatttggttt taggaaaaat
     7081 aaaaattgtt gattttttaa aatcatataa caatttttat tattggcttg gttttgatga
     7141 gttacctcaa tctgagaaaa taaaatttct aaactatctc aatatattaa gtattcataa
     7201 ggaaatacaa gataaaactg tgaatagggt ttataccgat tgttttgata ttgataaatt
     7261 acattcgctt ggtagaatta caactaatga atgtattaat ggtataaaaa aaatctatca
     7321 aaaaaacaaa ttagaatttg acaatatact caaataacta gcctatgttt tgtaaaataa
     7381 aaatattctt gctgagtgta gagccagaga taaaaagatt tgatagtagt ttgcagttgt
     7441 agaattatat aaacaagaaa atagtcagca gccgtaggtc agattctcga atccgacatt
     7501 ttccaacagc ggcatttcgg aaacgataga tgcgtcaaat atttttgtcg gatacaaata
     7561 tccgacctac atctctgcgc agcagactct acaaggtatt aatgatttag gaaatttaag
     7621 tccggaagca caacttgccg ccgtgagcct attacaggac agtgcttttg cggtaaaaga
     7681 cagtatcaac tctgccagac aatgggctga tgcccatccg aatataactg caacagccca
     7741 aactgccctt gccatagcag aggccgcagg tacggtttgg ggcggtaaaa aagtagaact
     7801 taacccgact aaatgggatt gggttaaaaa taccgattat aaaacacctg ctgcccgacc
     7861 tatgcagact ttagatgggg aaatggccgg tgggaataaa ccgcctaaat ctataacgtc
     7921 tggaggaaaa gccaatgctg caacttatcc tcaattagtt aatcaattaa ctgggcaaaa
     7981 cttaaaaaac attgcggctc aagatccaag attgagtcta gctcttcata agagtgaaaa
     8041 aaattttcca ataggaactg caacttatga agaggcagat aggctaggta aaatttgggt
     8101 tggtgagggt gcaagacaaa ctagtggagg cggatggtta agtatagatg gcactcgaca
     8161 atatcggcca ccaacagaaa aaaattcaca atttgcaact acaggtattc aagcaaattt
     8221 tgaaacttat actattgatt caaatggaaa aaggaataaa attaaaaatg gacatttaaa
     8281 tattaggtaa ttatatgaga ttaaaattaa aaaattatga ttgttctgac tttgatttgg
     8341 aagatttccc acaagacaag ttagaaaatt tttgtatact tttgacatta tcaataggtt
     8401 ttgatgaaag taatggtgct gattattttt atgtttatat atatagcact gaatggttac
     8461 tttcaaatat acatagaccg atgtcattaa aaaactcaat tgttacaaac cgttttaata
     8521 ttgaacacat attaaaattg ataaatgata tattggaaat atgtaattca acgtctgaag
     8581 ataagtctat atcaaatttg gcaaaatatt ttgactggga atttgacgat tataatctaa
     8641 atatccaaga ctaaagatgg tggacagcat ttagaccaaa aacaggcaaa cggtattttg
     8701 atgacgaatt aaaataaaag gaattattca tgaaattaat taattttgaa gagagttcag
     8761 ttaaaattag tctcgataaa gatgagttgt atattattca agcaattgta ggagaaattt
     8821 attcaggcgt atgcgtggat tgtagagatt ttgagataat tcatggtgtt gaaaaaataa
     8881 agttctttct ttggataaag aacttaaaaa aatatatgat acttgggata aatgttagct
     8941 aggtaaggtg ggcacttgtt gcccaccttt tgccgtatat taaaaatcct tttcaggctg
     9001 cctgaaactg ggtgggcatc aatgccaatc ctaactgtgc tgatgaagca ggaaaactga
     9061 tatgggaaaa cgaccccaat aaaaattggt gggctaaccg tatggatgat attcgcggca
     9121 tcgtccaagg tgcggttaat ccttttttaa tgggttttca aggagtaggg attggggcaa
     9181 ttacagacag tgcggtaagc cctgtcacag atacagccgc tcagcagact ctacaaggta
     9241 ttaatgattt aggaaaatta agtccggaag cacaacttgc tgccgcgagc ctattacagg
     9301 acagtgcctt tgcggtaaaa gacggcatta attccgccag acaatgggct gatgcccatc
     9361 cgaatataac agcaacagcc caaactgccc ttgccgtagc agaggccgca actacggttt
     9421 ggggcggtaa aaaagtagaa cttaacccga ccaaatggga ttgggttaaa aataccggct
     9481 ataaaacacc tgctgttcgc accatgcata ctttggatgg ggaaatggcc ggtgggaata
     9541 gaccgcctaa atctataacg tccaacagca aagcagatgc ttccacacaa ccgtctttac
     9601 aagcgcaact aattggagaa caaattagta gtgggcatgc ttataacaag catgtcataa
     9661 gacaacaaga atttacggat ttaaatatca attcaccagc agattttgct cggcatattg
     9721 aaaatattgt tagccatcca acaaatatga aagagttacc tcgcggtaga actgcgtatt
     9781 gggatgataa aacagggaca atagttatcc gagataaaaa ttctgacgat ggaggtacag
     9841 catttagacc aacatcaggt aaaaaatatt atgatgattt ataggaaaaa gccatgaata
     9901 tactatccat aaataatcaa aactcaacta tttcactaac tcaagatgaa gtttttgttt
     9961 tacgagctat cttgaatgag atatatgcgg gcgtatgtgt agattcaaga gaatttgaaa
    10021 atgtatctgg tgttagaaaa catgaagtag ataatttaca acaacagttt gctggaattt
    10081 ataaaaaaat gacaacttaa caacccaaat ttttgtcaga gcctagtgca aattacaact
    10141 atgattctat tgtagccgaa atgaaagaaa aaaatcatgg gttggcgaca gggttgatgt
    10201 tgttaatatg cctgatggag cacctactag tatggataac acgcgtatta tggcagcacg
    10261 tgaagcagga gtaaaagtgg aagcgaatgt tcataatttt aatgaccgat tatcatcaaa
    10321 agagagaatc aggtttaagc atgatggtat tgagcctcaa acttggggag aagctatcca
    10381 gctacgaatt agaaagcaag aaacacaaaa aggagttcca gaagggtgga gcaaaagatt
    10441 tcctaacgga agtatttatg atgtaaaggt acttaggaaa tgataaaaca aaatagtttt
    10501 gttccgtatc ctgaagcaat gcttcctaaa ggatttaaat atccgcaaag ttatttaaaa
    10561 ttagctcaat ccactcatgc cattaactac gatgaacaat attcttttcc ttggtggttt
    10621 gaaaatgcag aaagcaatat atcagaagta attgacattt attttgaaat aactggcatt
    10681 ccaaacctat taccttttgc tagaaaccaa gagtgggctg cctgttttga tatttcagat
    10741 aaatcaggta atcctaaaat tatagtagtt aatttagata atacaaaata ttacgagact
    10801 tttgaaaatt ttgatacttg gctaaaagaa gctgaaaatg atggttggta gcagccgtag
    10861 gtcggattct cgaatccgac attttccaac agcggcattt cggaaacgat agatgcgtca
    10921 aatatttttg tcggatacaa atatccgacc tacatctctg cgcagcaaac tttacaagat
    10981 a
//
LOCUS       DAWEYF010000061        10905 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.061, whole genome shotgun sequence.
ACCESSION   DAWEYF010000061 DAWEYF010000000
VERSION     DAWEYF010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.061"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(1..251)
                     /locus_tag="WGN93_001095"
                     /pseudo
     CDS             complement(1..251)
                     /locus_tag="WGN93_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(484..2541)
                     /gene="ppk1"
                     /locus_tag="WGN93_001096"
     CDS             complement(484..2541)
                     /gene="ppk1"
                     /locus_tag="WGN93_001096"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ0227007.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGAQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(2710..3153)
                     /locus_tag="WGN93_001097"
     CDS             complement(2710..3153)
                     /locus_tag="WGN93_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ0227008.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAINAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(3160..3675)
                     /locus_tag="WGN93_001098"
     CDS             complement(3160..3675)
                     /locus_tag="WGN93_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ0227009.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            3945..6575
                     /locus_tag="WGN93_001099"
     CDS             3945..6575
                     /locus_tag="WGN93_001099"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ0227010.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYSLPKKQVIAVGDNAFDANQWQEWYGDKENGV
                     LVNSGDLDGMNFQTAFDAIAAKLQSQDAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVSVPADQLPVVLPENVVPDGMGSPLAKMPEFYETTCPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAEAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            6810..7622
                     /locus_tag="WGN93_001100"
     CDS             6810..7622
                     /locus_tag="WGN93_001100"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HEZ0227011.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEQYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKEGFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            7615..8424
                     /locus_tag="WGN93_001101"
     CDS             7615..8424
                     /locus_tag="WGN93_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ0227012.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFADPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            8421..8975
                     /locus_tag="WGN93_001102"
     CDS             8421..8975
                     /locus_tag="WGN93_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227013.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRTLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYSINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            9627..9881
                     /locus_tag="WGN93_001103"
     CDS             9627..9881
                     /locus_tag="WGN93_001103"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227014.1"
                     /translation="MPRGRGCFGFHARLRRALLSGYAVCTAAVSAWFDAVGHLCGYAL
                     IFSSAVLPVLAGIFSSASIVNLLILPFAKSATQWLRYPCF"
     gene            complement(9850..10161)
                     /locus_tag="WGN93_001104"
     CDS             complement(9850..10161)
                     /locus_tag="WGN93_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ0227015.1"
                     /translation="MKYKSEIFAAIHETMQGLHDIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(10158..10526)
                     /locus_tag="WGN93_001105"
     CDS             complement(10158..10526)
                     /locus_tag="WGN93_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ0227016.1"
                     /translation="MRIFKNQWIVKFAKKHKISDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLIFFRYGERAFFMTAFAKNDRENITDKELAELKKAAAIILA
                     MTETDIEQAKSNGTFTEIQP"
BASE COUNT         2632 a         2767 c         2827 g         2679 t
ORIGIN      
        1 cgaccacgtc tgcctttacg ccgtccgccg aaatcgcttt cgtccggctc gacagggccc
       61 tcaaaaacct catcggcagc caaggccaaa tgatggttga taaccgtgcg gattttacgg
      121 tagaacagtg ctgccgaatt gggatggata cccaaaatat cggcggcaga acgggcggta
      181 acttcgagta caaaaaaacg gagcagttct ttctgtactt ttttctttca tttgcagtgc
      241 gttatcttca tatttcgagg gtaacatatc tgctaatcta gtacagcccc taaaatttaa
      301 tccactataa tgccgtctgg aatgcggcgg attggggttg ggagcgtata ggggaagtgc
      361 ttatgcggaa atggcgaagg tgtgtttttg actccggtcc gccctgttta gattgctgta
      421 aaaccatgcc gtctgaaacg gaaaggtttc agacggcatg gtttttgatt ggggcggtgc
      481 gggtcagcct ccgagcagtg tccacaaatc gttttgcagg tcggcttcgg attcgccctc
      541 ggcaggtgcg gcgcggatat agccgccgtc gggctgcatc agccacgcgt gcgtattgtc
      601 tgccaatgcc atttccaaac cttcgcggat gacgcgtttt ttgagttcgg gcgcggtaat
      661 cggcgcggcg gtttcgatgc ggcggaagaa gttgcgcccc atccaatccg cgctggagat
      721 aaaggtatcg tccgcgccgt tgttgtggaa gcaatacacg cgcgcgtgtt cgagctgcct
      781 gccgatgatg gagcggacgc ggatgttttc ggacaagcct tttacacccg ggcgcaaggt
      841 gcacataccg cgcacaatca aatcgatttg tacgcctgcc gcgcttgccc gatacagggc
      901 ttcgatgacg gtcggttcga tgagcgaatt catcttggcg gtaatccgcg ccggtttgcc
      961 ggcttttgcg tgttcggttt cgcgtgcgat gcggtcgata accattttgt gcagggtaaa
     1021 cgggctttgg tagagtttgt tcagccgccc gggtttgccc aagcctgtga tttccataaa
     1081 caatgtgttc acatcggcgg tgatttgttc gtcggcggta atgatgccga agtcggtgta
     1141 gatgcgcgat gtgccttggt ggtagttacc cgtgccgagg tgggcgtaac gcttgagtac
     1201 gccgtcttcg cggcggatga ccagtgccat cttggcgtgg actttgtagc cgaacacgcc
     1261 gtacacgacg tgcgcgcccg cctcttcgag ctgcttcgcc cagttgacgt tgttggcttc
     1321 gtcaaaacgc gccatcagtt cgacgacgac ggttacttgt ttgccggcga gtgccgcctt
     1381 catcagggcg cggacgagtt cggaacgcgt gccggtgcgg taaatcgtca ttttgacggc
     1441 aagcacgtcg gggtcggcgg cagcttcgcg catcatttcg acaacggggt cgaacgattg
     1501 gtaggggtgg tgcagcagga tgggcgattg gcgcaccaaa tcgaatatgg acgcggtttt
     1561 gcccaaggct ttcagtctgc ccggcgtgtg tgtgggaaat ttcaaatcgg ggcggttgac
     1621 taggtcgggg acggcgttga ggcgcacgag gttgaccggg cctttgacct gatagagttc
     1681 ggcggcggtc agtttgaatt gcgcgagcag aaagtcgcgg atgtaggcgg gacaggtgtc
     1741 ggcgacttcg agccgcacgc cgtcgccgta ttcgcggtcg tgcagttcgt tttggatggc
     1801 ggcgcggagg ttttgcaggt cttcttcgtc aacggtcaag tcgctgtcgc gcgtcaggcg
     1861 gaactggtgg cagcctttga cgttcatgcc cgggaagagt ttgccgacgt gggcgtgcag
     1921 gatggaggag aggaagacga agccgtgtcc gccgccacac agttcggacg gcaggggaac
     1981 aacgcgcggc aggatgcgcg gtgcctgcac aatcgccatc cccgaaggcc tgccgaacgc
     2041 gtccgtgccg tcgagttcga cggcgaagtt gagcgatttg ttcagcggtc gcgggaaggg
     2101 gtgggacggg tcgagtccga tgggggtcag gatcggcagc agttcgcggt cgaaatagtc
     2161 ttcgatccat tttttctgcg cgcccgtcca gttgcggcgg cggtaaaaat ggatgctttc
     2221 ccgcgccaac tcgggctgaa ggacgttgtt gaacaggtcg tactggtgcc gtatcaggga
     2281 gcgcgccgct tcggtaacgt cggcgatggt ttcagacggc attttgccgt tgtccagcct
     2341 gcgccggggg tgcagcttgt tttcacgctt gagccacgcc atgcggactt cgaaaaactc
     2401 gtcaagattg gacgacacga tgcacaggaa gcgcaggcgt tccaaaaggg ggacgttttt
     2461 gtcttccgcc tgtgccaaca cgcggcggtt gaatgccagc aggcttagtt cgcggcagag
     2521 gatgcggttt tgttcgggca taaggttctc ccaaagatgg ttgttgttcg gtcggagcgg
     2581 gcaggcaatg ccgtctgaag gcttggcggc atctgcgccg gtttcagacg gcatgacgtg
     2641 gcggacagcc tgtttcaggc atcggggcaa tgtgaaaaca gataccggcg cgtgcggtat
     2701 ccgtctgttt caaatcactt ccaacacaaa ataatgacgc agtttttcgt acaccgcatc
     2761 gctgacgttg atgcagccgt tggtcataat cctgtcggac acggacgggg aggcgatgcg
     2821 ttcgttccgc ctttccgacg gtatctgatt ccaaacgcgg tgcagggcga aaagaaaatc
     2881 accctcctgc ttgaaaccga tgacttcgcc gccgtatcca ggcttgtcgg tactgttcag
     2941 cgtcagcccg aacgtcccct tgggcgtggc aacaccgatg aggacggggt ggcactgacg
     3001 gtcgtcagcg aaacagagtt ccgctttgga tgtatcgacg atgacttttt tcttttggat
     3061 ataggcattg atcgcatccg gttgcccctg tgcatatacg ggggcaacca ttgacaggcc
     3121 gcataatatc cctaaaaaca ggcggaacgg catgtcggat tattggcgga tacgtttcgg
     3181 ttttgccggc acgatttcgc ggatgatgac ttgcggctcg gctttgggtg cgggcggcgg
     3241 acaggcggca tctttcggga agacggggtt ccagtagaag ctgcgggcaa atttgtcttt
     3301 atcgaaaatc actttgtatt ggcaggtagt aacatcttct acgccggaag tgttttcagg
     3361 gtcgatacct acgcccgggg tatggaagtg gaacaggtaa tcccattcgc gcacgccgta
     3421 cataccttcg tcgtaatgcg ggcggcccag gattttgtag atgtcgtctt tggtcaggcc
     3481 ggggcgcatc tgatccagtt cgtcataagt cgggaatgtg ccgcgcttgt tgtcgagcgt
     3541 tacggaatag ggtttcggga aaaccggatt gtcggtcgtg ccgtcggctt tgacgttgct
     3601 tttggttgcg caggcagaca gaacgcccgc cgccaatact gccaagcccg gtttgacgat
     3661 ttgtttgatt ttcatatgca gaatcctctt ttacccgatg cccgtctgcc ttttgttcgg
     3721 aagagccgca tcaggagagt tttaaacatt tgattttggt ttgtaatatt agcataaaaa
     3781 acgtgcgtat caataaacgc ggtgtatttg tacggcatac ggaataatgc gcgtgcgaat
     3841 ttacgcatcc tgccggcaat ctgccgattc gccgcttccg gcaacctgtt ataattgatg
     3901 ccgactttat ttttccaacg tttttaagcg aaaacagaat gactatgcaa gaacaatatc
     3961 aacccgccgc catcgagcct gcggcgcaga aaaaatggga cgacgcccgt attttcaacg
     4021 tctccgaaga cgcttccaaa cccaaatatt attgcctctc catgttcccc tatcccagcg
     4081 gcaagctgca catggggcat gtgcgcaact acaccatcgg cgatgtattg agccgcttca
     4141 aacttttaaa cggcttcaac gtcatgcagc ctatgggttg ggacgcgttc ggcatgccgg
     4201 cggaaaacgc ggcgatgaaa aacaacgtcg cccctgccgc ttggacgtac gataacatcg
     4261 aatacatgaa aacccagctc aaaagcctgg gttttgcgat tgactgggcg cgcgaaaccg
     4321 caacctgcaa acccgaatac taccgctggg aacaatggct gtttaccaag ctgtttgaaa
     4381 aaggcatcgt ttatcgcaaa aacggcacgg taaactggga cccggtcgac caaaccgtcc
     4441 ttgccaacga gcaagttatc gacggacgcg gttggcgttc gggcgcgttg atcgaaaaac
     4501 gcgaaatccc gatgtattac ttcaaaatca ccgattacgc cgaagagctg ctcaacgact
     4561 tggacaagct ggaacactgg cctgaacaag tcaaaaccat gcagcgcaac tggatcggca
     4621 aatctcgcgg catgaccgtg cgcttcgccg tttcagacga cagcaaacaa ggcttggaag
     4681 gcgattacgc gaaattcctg caagtttata ccacccgccc cgacacgctg atgggcgcga
     4741 cttatgttgc cgttgccgcc gagcatccgc tggcaaccgc agccgccgcc gacaaacccg
     4801 aattgcaggc atttatcgcc gaatgcaaag ccggttcggt tgccgaagcc gatatggcga
     4861 cgatggagaa aaaaggcgtg ccgaccggtc gctacgtcgt caacccgctc aacggcgata
     4921 agctggaagt gtggattgcc aactatgtat tgtggggcta cggcgacggc gcggtaatgg
     4981 cggttccggc gcacgacgaa cgcgatttcg agttcgccgc caaatacagc ctgccgaaaa
     5041 aacaggtcat tgccgtcggc gacaacgcat ttgacgcaaa ccaatggcaa gagtggtacg
     5101 gcgacaaaga aaacggcgta ttggtcaata gcggcgactt ggacggtatg aattttcaga
     5161 cggcattcga cgccatcgcc gccaagctgc aaagccaaga cgcgggcgaa ccgaaaaccc
     5221 aataccgcct gcgcgactgg ggtatttccc gtcaacgcta ctggggctgc ccgattccca
     5281 tcgtccattg cgaaaaatgc ggcgacgtat ccgtccccgc cgaccaactg cccgtcgtcc
     5341 tgcctgaaaa cgtcgtaccc gacggcatgg gttcgccgct ggcaaaaatg cccgagtttt
     5401 acgaaactac ctgcccatgc tgcggcggcg cggcgaaacg cgaaaccgac accatggaca
     5461 ccttcatgga atcgagctgg tatttcttcc gctatatgtc gcccaagttt tcagacggca
     5521 tggtatcggc tgaagccgca aaatactggg gcgcggtcga ccaatacatc ggcggcatcg
     5581 aacacgcgat tttgcacctc ttgtacgcgc gtttcttcac caaactgatg cgcgacgaag
     5641 gtctagtcaa tgttgacgaa ccgtttgaac gcctgctgac gcaaggcatg gtcgtttgcg
     5701 aaacctacta ccgcgaaaac gacaaaggcg gcaaagattg gatcaacccc gccgatgtcg
     5761 agctgacgtt cgacgacaaa ggccgccccg tttccgccgt cctcaaagcc gacggactgc
     5821 ccgtcgtcat cagcggcacg gaaaaaatgt ccaagtccaa aaacaacggc gtcgatccgc
     5881 aagagctgat taacgcctac ggcgcggaca ccgcccgcct gttcatgatg ttcgccgcac
     5941 cgcccgaaca gtccctcgaa tggagcgaca gcggcgtcga aggcgcgcac cgcttcctgc
     6001 gtcgcttgtg gcgtaccgtt tacgaatacc tgaaacaagg cgaagcagtc aaagcatttg
     6061 caggcagcca agacggtttg tctaaagaac tcaaagacct gcgccacaaa ctgcacgcga
     6121 ccactgccaa agtcagcgac gactacggcc gccgccagca gttcaacacc gccatcgccg
     6181 ccgtgatgga attgctcaac caatacgaca aaaccgacac cggcggcgaa caaggacgcg
     6241 ccgtcgccca agaagtattg gaaaccgccg tacgcctgtt gtggcccatc gtgccgcaca
     6301 tctgcgaaac cctgtggagc gaattgaacg gcgcgaaact gtgggaagca ggctggccga
     6361 cagtcgacga agccgccttg gtcaaatccg aaatcgaagt catggttcaa gtcaacggca
     6421 aactgcgcgg aaaaatcacc gtcgccgccg acgcatccaa agccgacctc gaagccgccg
     6481 cactcgccac cgagggcgca gtgaaattca tggaaggcaa gcccgccaag aaaatcatcg
     6541 tcgtgccggg cagactggtg aacatcgtcg tctaaccgct tttaaggttt atccacacgg
     6601 ataaaggccg tctgaaactt ggaaacaggg tttcagacgg cctttttaag gcagatggag
     6661 ttgataagtc caataacata ttggaatgga aaggttctat tggatttaga ctcactctac
     6721 acacgccccc aaatataaat ccattgtatt cctcacgatg ttttggcaca attccaagcc
     6781 aatcaaccac gcttgtactc ggcatcctaa tggcttcaaa accttttcta aaatgggcag
     6841 gcggcaaaca taaacttgtc ccctttatcg aacacaatct acctactccc acacgaaaac
     6901 gcctgattga acccttttgc ggttctgccg ctttgtctct tgcattggat ttcgaacaat
     6961 atctgctcaa tgatattaac gctgacttaa tcggcttatt ccgtatccta aaagaagaaa
     7021 aatccggatt catcgactac gcccgctctt tctttatttc cgaaaacaat agcgattcaa
     7081 gattctatga attgcgggaa caattcaact tcagcaaaaa tctgcacgaa cgctcggcac
     7141 tatttattta tttgaaccgt catgctttta acggtttatg ccgttacaac agcaaagggg
     7201 tattcaatgt gccgttcgga cgctacaaat cgccgtactt tccccaacaa gaaatggaag
     7261 gtttcattca gaaatctgac agagttgaat taatgtgcgg agattttcaa atgattctat
     7321 ctcagacaga caataccgat acggtttatt gcgatccccc ttacgcgcct ttaagcccaa
     7381 ccgcttcatt taccacttat gccaaagaag gtttcaattt agacaatcaa atccgtcttg
     7441 cccagtcagc ccaacaaatt gcgcccgatt cccaaggcgt tttgatttca aatcatgata
     7501 ctgaattcac aagggatatt tattcttttg ctattctgaa aacaattgaa gtacaacgca
     7561 atattgccgc aaaaggcagc agccgtaaaa aagtcggaga attattggca atttatgatt
     7621 gattttgaca aaccggctga agaagacgcc atttatcaaa gtcgtttgaa aaaaatcgtt
     7681 tcagacgacc ttgtcctcta caacgaaaat tcccttaacg tcatgcggaa gatattggaa
     7741 aaatatccaa acggctgttt tgatatgatt ttcgcagacc cgccttactt tctttccaat
     7801 gacggcttca gttgtcaaaa cggacaaatg gtttccgtca ataagggcaa ctgggataaa
     7861 tccaaaggaa tggcggcaga tttggaattc tacgaagaat ggctccgact gtgttacgcc
     7921 ttattaaaac caaacggcac aatttgggtt tgcggcacat tccataatat ttatttaatc
     7981 ggctacctga tgcaaactat cggataccat attttgaaca atattacttg ggaaaaaccc
     8041 aatcctcccc ctaatttgtc ctgccgtttt tttacccatt cgacagaaac aatcttatgg
     8101 gcaaagaaaa ataaaaaagc caaacacacg tttcattatg aaatgatgaa agcacaaaat
     8161 gatggcaaac agatgaaatg tgtttggaca tttcctcctc caaacaaagc cgaaaaaaca
     8221 ttcggcaaac atccgacaca aaaaccactc cccttgcttg aacgctgcat actctcagct
     8281 tcaaacatcg gagatttaat ttttgaccct ttcatgggca gcggcacaac aggcgttgcc
     8341 gccttaaaac atggtcggaa attttgtggt tgcgaactgg aagaagattt ttttgaatta
     8401 gcaaaaaaaa ggttagaaaa atgattattg gcggaatcgg tggtgcaagg acacaaacag
     8461 gactcagatt cgaagaacgt acagacttac gaacgttgtt tgaagaaatt cccgggtacg
     8521 acttaagaaa aacatatgat aatgcgggtt atgaagtttg gttcaatgga gaattgaagg
     8581 cttattgttt taaaaaatat gagttttacc gatttttgaa aagaccggga tacagtatta
     8641 attggaaaga ccatctgtct aaaagattac tacccgacaa tggcttattt atcatcatcc
     8701 gtgatacctt atttattatt gagatcaaat tccaacaaac tcccggttca gtagatgaga
     8761 aattacaaac ttgcgatttt aagagaaaac aatatacaaa attggttcac tctttaggtt
     8821 ggcgggttga atatgtctat gttttgaatg attggtttac aaagccggaa tataaagatg
     8881 ttttagatta tattatcagt gttaactgcc attaccaatt taacacgatt cccttaaggt
     8941 ggtttggact gcctgatggt gaaacaaatg aataaatacc atatttaaaa cacagccgtt
     9001 caaggtcgtc tgaatatcat ttcagacgac ctttcaccaa tccccgccgt tttccatctt
     9061 tctgctattg tgataaagta gcccgacctt ttgttcaaaa tacgcggatt ccgcgacact
     9121 gaatgcagca tctgtcaaag attatttgaa aacggtcgag ttagacaagt ctgccgacaa
     9181 tgtcgatacc acatccaaaa ctatccgcag ggtttaggcg gtattccaga gtacggtgtc
     9241 ttatgctgat gctgtaaaca atgcccgtat agaaaatcta aaacggttgt tgccgaccgt
     9301 tatgccggtt tatgagcaaa gtgtcagaaa taaggggcgc gttaatatag tggattaaat
     9361 ttaaatcagg acaaggcgac gaagccgcag acagtacaga tagtacggca aggcgaggca
     9421 acgctgtact ggtttttgtt aatccactat aaaaaacgtc ggcgttaagg gaaggggatc
     9481 gagaatttga gccgttgttt caaaatgccg tctgaaatcg tttgagattc agacggcatt
     9541 taaacagttc tgcgcccgcc cgttttgcct tcaagcccgc gccgcttaaa tccaatcccc
     9601 cctgcaacgg gcgcaaaaaa atctccgtgc ctcgcggtcg gggatgtttc gggtttcacg
     9661 cccgtctgcg ccgtgccttg ctgtcgggct atgccgtctg caccgccgcc gtttcggctt
     9721 ggtttgatgc ggtcgggcat ttatgcggct acgccctgat attcagttcg gcggtcttgc
     9781 ctgttttggc aggcatattc agcagcgcgt ctattgtgaa cttgctgatt ttgccgtttg
     9841 ccaagtcggc tacgcaatgg cttcgatacc cttgtttttg acgatggtca gcagcttcaa
     9901 cgccgcgccg ctgggctttt taacgccccg ctcccaagcc gaaacgtgat tttttcccac
     9961 gttgagatag atggcgaaag cggcttgcga tagtgcctcc ttctccctga ttgccttgat
    10021 gtccccgccg ctcaacggtt tgatttcggt caggcaggac ttgtcaaagc cgcgcatagt
    10081 ctttttgtcg attgcgccga tgtcgtgcag cccctgcatg gtttcatgta ttgctgcgaa
    10141 aatctcactt ttgtatttca tggctgtatc tccgtaaaag tgccgtttga tttggcttgc
    10201 tctatgtcgg tttctgtcat tgccaagatg atggcggcgg ctttctttaa ttctgcaagt
    10261 tctttgtccg tgatgttttc gcggtcgttc ttggcaaagg cggtcatgaa aaacgcccgt
    10321 tctccatacc tgaaaaatat caggctgcga taaccgccgc ttctgccttg tccttgcctt
    10381 gctatgcgct gcttaataac gccaccgcca aggtctgcgt ctatcagccc gttatccgcc
    10441 cgctctaccg cctccagcag ctcggaatca ctgattttat gtttcttggc aaatttcact
    10501 atccattggt ttttgaatat ccgcattgtg tagccgttga ttagtgatac ttggaattat
    10561 accagagaca gacaacacgg caagctgcct tttttatgcc ccgcaatttc tccgtttatg
    10621 ccgcctgaaa cactggcggc taacctgatt attttttaat caatcgcttt taatggctca
    10681 aattgcgttt ttagcgcgtt tcgctgtctt cctatgtccc ccatatataa ccaagcggtt
    10741 taaccgccat tcctgctcaa aataggcgcg gttccgtgcg ttttggcttt tcattccgtt
    10801 acgctcccac tgccaagacg gtgaaaaacc ggaaaacccc aaaagttgtt accgattcgt
    10861 taccatttgt taccgcattt gttaccaatt ttttatcttt ttctt
//
LOCUS       DAWEYF010000062        10671 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.062, whole genome shotgun sequence.
ACCESSION   DAWEYF010000062 DAWEYF010000000
VERSION     DAWEYF010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10671
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.062"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(14..1216)
                     /gene="trpB"
                     /locus_tag="WGN93_001106"
     CDS             complement(14..1216)
                     /gene="trpB"
                     /locus_tag="WGN93_001106"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ0227017.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVESGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTAAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPQMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(1299..1988)
                     /locus_tag="WGN93_001107"
     CDS             complement(1299..1988)
                     /locus_tag="WGN93_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ0227018.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            2185..2964
                     /gene="rsmA"
                     /locus_tag="WGN93_001108"
     CDS             2185..2964
                     /gene="rsmA"
                     /locus_tag="WGN93_001108"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ0227019.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVIEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNNIEGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGRADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKVV"
     gene            3137..3865
                     /locus_tag="WGN93_001109"
     CDS             3137..3865
                     /locus_tag="WGN93_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227020.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENIALAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            3938..4297
                     /locus_tag="WGN93_001110"
     CDS             3938..4297
                     /locus_tag="WGN93_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227021.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMSLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            4302..4748
                     /locus_tag="WGN93_001111"
     CDS             4302..4748
                     /locus_tag="WGN93_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ0227022.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAAALSGSSMVTPYALF
                     LQWDTGGKTVRHCITHDMADPESYRKLKVWVLWRQPKKTAETDTSD"
     gene            4779..6053
                     /gene="folC"
                     /locus_tag="WGN93_001112"
     CDS             4779..6053
                     /gene="folC"
                     /locus_tag="WGN93_001112"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ0227023.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVSEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPKSLLSHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDDPARNRNALPFPALRGTYQLSNAACALTVLECLNAKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALHRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            6066..7091
                     /gene="ftsN"
                     /locus_tag="WGN93_001113"
     CDS             6066..7091
                     /gene="ftsN"
                     /locus_tag="WGN93_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ0227024.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLESSAKPKQEEAAEKPQQAETAKTAPKQAKQRAAEKVPATADS
                     TDTVAVEKPKRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSD
                     SAVKEAKKADKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGY
                     AEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGI
                     AGQVTNE"
     gene            7084..7581
                     /locus_tag="WGN93_001114"
     CDS             7084..7581
                     /locus_tag="WGN93_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ0227025.1"
                     /translation="MNNLPVADLLVSAIIAACIVISTMRGVIAEAGSMAAWVVSFFFA
                     KLFAASFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLIMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLKHADNRDG
                     ALEDD"
     gene            7790..9334
                     /gene="purF"
                     /locus_tag="WGN93_001115"
     CDS             7790..9334
                     /gene="purF"
                     /locus_tag="WGN93_001115"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ0227026.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLVGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLVLGSQTDNEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTIITRQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDDIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRVEHSISIS
                     DAGDEE"
     gene            9434..9925
                     /gene="greB"
                     /locus_tag="WGN93_001116"
     CDS             9434..9925
                     /gene="greB"
                     /locus_tag="WGN93_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ0227027.1"
                     /translation="MSTETKNYITPAGWQALKDELYRLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            9984..10610
                     /locus_tag="WGN93_001117"
     CDS             9984..10610
                     /locus_tag="WGN93_001117"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ0227028.1"
                     /translation="MRKIRTKICGITTLEDAAAAAAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         2664 a         3094 c         2762 g         2151 t
ORIGIN      
        1 cagacggacg aggttacagt ttaatccctt tgagcttcgc cacggtattg atgtctttgt
       61 cgccacgacc tgagaggttg accaaaatca cttggtcttt gcccatttgc ggcgcgtttt
      121 tcaccgccca agcaacggca tggctggatt cgagagcagg aataatgccc tcgaagcggc
      181 agagcaagtc aaaggcttcg agtgcttcgt cgtctttggc ggcggtgtat tcgacgcgct
      241 tgatgtcgtg cagatggctg tgttccgggc cgatgccggg gtaatccaag cctgcggaaa
      301 cagagtgcgt acccaaaacc tggccgtttt cgtcctgcat cagatagctg cggaaaccgt
      361 gcaatacgcc aatcggtgcg cccgaagtaa tcggcgcggc gtgatcgggg gtgttcacgc
      421 ccaaaccgcc ggcctccacg ccgacgaggc gcacgttttc ttcgccgata tacgggtgga
      481 acaaaccgat ggcgttcgat ccgccgccca cgcaggcaac ggcaacgtcg ggctgtctgc
      541 cgatggcttc caacatttgt tctttggctt cattgccgat cacgcattgg aaatcgcgca
      601 ccatttcggg atacggcgcg gggccagcgg cggtaccgat gatgtagaac gtgtcgtcca
      661 cgcgggcgac ccattcgcgc atggcttcgt tcatcgcgtc tttcagcgtg cggctgccgc
      721 tttctacacc gaccacgttc gcacccaata atttcatacg gaacacgttg ggcatttggc
      781 gttggatgtc gtccgcgccc atatacacgt cgcaagtcat accgaagcgt gcggcaacgg
      841 tggcactcgc cacgccgtgc tgacccgcgc cggtttcggc gatgacgcgt tttttaccca
      901 tgcgttttgc caacagtgcc tgaccgatgg tgttgttgac tttgtgcgcg ccggtgtggt
      961 tcaagtcttc gcgcttcaac cagatttgcg cgccacccag atgttcggac aaccgcgcgg
     1021 cgtggtaaac ggggctgggc ctgccgacgt agtgtttcaa atcgcggtgg aattcttccc
     1081 aaaacgacgg gtcgtttttc gctgccttat aggcatccgc cagctcttgc aaagcgggaa
     1141 tcagggtctc ggacacgaac agcccgccgt gttcgccgaa aaagcccttc tcgtcgggcg
     1201 cgtggtagtt cttcatcgga ttcttccttg tgcttcaggt tttcagacgg catttccgtt
     1261 ttttcaaaca tgccgtctga acgggaaatt gtcggcaatt ataactgttt ttcacacaag
     1321 cccgccattt caaaaaacgc ccgatacgcc gccgcttttt tcgccaaact caaaggatag
     1381 gcgcgcgaag tcgaaggcag gcgcgtcagc gtcaaatccc gtccggcaaa cggaaacggc
     1441 acggtttcgc ccgttttcgg cattttgata ccgccaccct gaatatcgag caggatttcc
     1501 gtcgccttgc cgcctgtcgt acaaatatgg cggcactcgg gtatttttgc caacaccgcc
     1561 gccaaatcga cggtttcaac tacctttaaa aacttgtcgg acgcattgcc gtgctgacgt
     1621 accgccttca acacggtcgg acaggacgca attccccgtt cgcgcaaaaa cgccttgatt
     1681 ttctcggcat caaacgcttt ttcagacaac ctttggaaat gcgccgcatc attaaaaaac
     1741 accagcccgt aaacgcgcca catatcgttt tggaaattcg gataatgaaa ctgcatcgcg
     1801 cgtttgtctt ccttgggcgg aaacgtcccc atcatcatga ccgcagcctt cggcggcaac
     1861 acggaatcga agggatgggt ttcgatttca agcagatttt cagacacgtt caatcctcca
     1921 acaggcaaaa cggcagacag ccggtttttg caccaaaccg ccaaacacgg caagccttca
     1981 aacagcatta tcacgccctg ccgttttcgg ttacaatgcc gacatcaaac ggatactgta
     2041 aacacattta tgtttcaaca cacaggacga cacttaaagc accgccctat gtgccatcct
     2101 gatttggaag gggttacgcc cctcccaaat agagtctgat tctaccgccc taaagggcgg
     2161 ggtttcaacc gaaaaggaaa cacgatgaaa gaacacaaag cccgcaagcg tttcgggcag
     2221 aattttttgc aggacacgcg gattatcagc gatattgtca acgccgtgcg cccgcaggcg
     2281 gatgatgtcg tgattgaaat cggcccgggt ttggcggcga ttaccgaacc tttggcgaaa
     2341 aaactgaacc gcctgcacgt tatcgaaatc gaccgcgaca tcgtatgccg tctgaaaacg
     2401 ctgccgtttg cggataaact cgtcattcat gaaggcgacg tgttgcagtt tgatttcaac
     2461 aacattgaag gcaaaaagaa aatcgtcggc aacctgccgt acaacatttc cacgccgctt
     2521 ttgttcaagc tggcggaggt ggcggacgat gtcgtcgata tgcactttat gctgcaaaaa
     2581 gaagtggtcg agcgcatggt tgccgcgccg aaaagcaacg actacgggcg tttgggcgtg
     2641 atgctgcaat atttcttcga tatggaaatg ctgattgacg tgccgcccga atcgttcgac
     2701 cctgcgccga aagtggattc cgccgtcgtc cgtatgattc cggtgaaaca ccgcatcggc
     2761 agggcggacg atttcgagca ttttgccaaa ctcgtgaaac tcgccttcca ccaacgccgc
     2821 aaaaccatac gcaacaatct gaaagagctt gcaggcgacg atgatttgca ggcagtcggc
     2881 atcaatccgc aagaccgcgc cgaacatatc gcgccagaga aatacgtggc gttgagcaat
     2941 tatctggcgg gcaaggtcgt ctgaaaaggg agtaagccga tgacgaaata cctgctttta
     3001 cccctgatac tgccgcttgc agcctgcctg accaatccga acgaccgttt ttttgacggc
     3061 agacgctaca cgcttcatca tatggagctc ccgtaacgac aacctgcaac ggcaaatgcc
     3121 gtctgaaaga aaagacatga tcaaattcaa aaacgtacac aaacatttca aagacctgca
     3181 cgtcatcaac ggcgtgaact tggaaatcaa aaaaggcgaa gtggtcgtcg tctgcgggcc
     3241 ttcgggcagc ggcaaatcca cactcatccg caccgtcaac cagcttgaaa gcatcgaaag
     3301 cggcgagatt tgggtggacg gtgtcaacgt tgccgaccca aaaaccgatt tgaacaaaat
     3361 ccgcgaagaa gtcggctttg tgtttcaaag tttcaacctc tacccgcacc tgaccgtgtt
     3421 ggaaaacatc gccctcgcac cgatgaaggt taaggggcaa aatgcggaac aggcggagaa
     3481 aaaggcaatg gagcttttgg aacgcgtcgg actggcacac aaaaaagacg ccttcccttc
     3541 ccaactttcc ggcggccagc agcagcgcgt ggcgattgca cgcggtttgg cgatggaacc
     3601 gcgcgtaatg ttgtttgacg aaccgacctc cgcactcgac cccgaaatgg tcggcgaagt
     3661 gttgaaagtg atgaaagact tggcagaaag cggcatgacc atgatgtgcg taacccacga
     3721 aatggggttt gcccgcgaag ttgccgaccg cgtgattttc gtcgataaag ggcaaatcct
     3781 cgaagacgaa acgcccgaag cgttttttac caacccgaaa cacgaacgcg ccaagcagtt
     3841 cctgcaacag gtcatgaccc actgatgcta taccgtctga aaaccgaacg ttcagacggc
     3901 atagcccgac accgcaagat gattgagaaa gaaaaccatg tattttgttg accgcaccgc
     3961 cgtcgtcctc aagccgaccg tccgcttttt ggaatggctc aaaagcaccg acgaaaatat
     4021 gcccgacctg accatagagc agcttcgtgc caactgctcc gtcttcctcg ttccgcagtt
     4081 cgacgagccg gaagccgtcg tttcctattt cgacgaacgc taccgccaga ttttcgaggc
     4141 ggagctggca ggttgggaca tcgataagga taaatggccg caagatatga gcttgaaagc
     4201 gttttgggag tttttcgaca tcgaaatcca cgatatggtt ttagacatgg aagaagcgga
     4261 attgaacatt acccccgtgt tcgacaacat gatgtaaggc tgtgcgcgcc tttcagacgg
     4321 cattgaggcc gtcccgcatc ctgaacatcc tgaccgtatc gctccactcg gcttcccttg
     4381 ccgtctgcct gacctggttt tacggccgga tgatgtggtt cggtttggcg gctttggcgg
     4441 caagttacgc atactcgctc aggataacga atctgaaaca ccgccatgcc ataaccgcca
     4501 ttaccataga ccgcgacgga caggcggaaa tcgtatccgg caaagaaaaa acggcaaagg
     4561 cggcggcact gtcgggcagc agtatggtta cgccttatgc cttattctta caatgggaca
     4621 ccggcggcaa aaccgtccgc cactgcatca cccacgatat ggcggacccg gaatcctacc
     4681 gcaagctgaa agtctgggta ctttggcggc agccgaaaaa aaccgccgaa accgatacat
     4741 cagactgatt tcagacggca tttgaaaacg aaacactcat gaaaacacta caagactggc
     4801 tctcccattt ggaaaccgcc cacagcggcg gcttgatcga tatgggcttg gaacgcgtaa
     4861 gcgaagtgaa aaaacggatg aagctcacgc cgcaatgccc cgtcgtcgtt gtcgcgggaa
     4921 caaacggcaa aggttcggtc tgcgcctacc tgacacagat ttacaaacag gcgggctaca
     4981 aaaccggcac actgaccagc ccgcatttat tgcgttacaa cgaacgcatc gccatcaacg
     5041 ccgaacccgt ttcggacgat acgattattg cctctttcga gcgcatcgaa gccgcgcgcg
     5101 gcgaaatatc actgacttat tttgaattca atacgttggc ggcggtcgac atcttcatgc
     5161 gcgaacaggt tgacgtgatg atattggaag tcggcttggg cggacgcttg gacgcggtca
     5221 acgcgtttga cggcgattgc gcggtggtta ccagcgtgga tttggaccat caggcatttt
     5281 tgggcgatac ggtcgagcag gtcggctttg aaaaagcagg cgtgttccgc agcggcaaac
     5341 ccgccatctg cggtcaaaac cccgcgccca aatcgttgct ttcacacgcc gaagccatag
     5401 gcgcgaaact gctgatggtg cagcgcgatt tcgagtttca cgcgatggaa aacatccaat
     5461 ggaactaccg cttccggccg caacattcag acgaccccgc acgcaaccgc aatgccctgc
     5521 ctttccctgc attacgcggc acataccagc tttccaacgc cgcctgcgcg ttgaccgtat
     5581 tggaatgctt gaacgccaaa ttgcctgtgg acatcggcgc catcaaacgc ggattgctgc
     5641 tggttgaaaa tcccggacgc ttccaagtcc tgcccggccg tccgctgacc gttttggatg
     5701 tcggacacaa tccccacgcc gcccgcgccc tgcaccgcag cctgattaat ttggcgtttg
     5761 cgcaaaaacg caccgccgta ttcagtatgc tgtccgacaa agacatagac ggcgtgttgg
     5821 aaatcgttaa agaccagttt gacgaatggt atatcgcgcc tttggacgtg ccgcgcggca
     5881 tgacgctcga gagcctgcaa aacaaactgc acgaacacag catcgaaaac atacagacat
     5941 tcgccgccgt ccgcgaagca taccgggcgg cagcctcaaa agcgggcgag aacgacagaa
     6001 tcgtcgtttt cggctcattt cataccgttg ccgatgtcat gtcggtactg taaaaggaaa
     6061 cttctatgtc cgaaaacaaa caaaacgaag tcctgagcgg ttacgaacaa ctcaaacggc
     6121 gcaaccgccg ccgcctcgta acggcaagtt gcctggttgc cgcctcctgc atcctgctgg
     6181 cagccgccct cagttccggc cctgccgaac agactgccgg cgaaacaagc ggcgtagaaa
     6241 acaaagcggc aggtgcggca caaacccctg ccttgaaatc cgccgccgac aaaccgcagg
     6301 acttggcagg cgaagacaag ccttctgccg ccgacagcga aatcagcgag cctgaaaacg
     6361 taggcgcgcc gctggtgctg attaacgacc gcctcgaaga cagcaatatc aaaggcttgg
     6421 agtcatccgc aaaaccgaaa caggaagaag ctgccgaaaa accgcagcag gcagaaactg
     6481 ccaaaaccgc accgaagcag gcaaaacaac gcgctgccga aaaagtgccg gcaactgccg
     6541 acagtacgga tacggtagcg gttgaaaaac cgaaacgcac tgccgaaaca aaaccgcaaa
     6601 aagcggaacg cactgccaaa gccaagccca aagccaaaga aaccaaaacc gccgaaaaag
     6661 ttgccgacaa accgaaaact gccgccgaaa aaaccaaacc ggatacggca aaatccgaca
     6721 gcgcggtaaa agaagcgaaa aaagccgaca aggctgaaag caaaaaaaca gccgaaaaag
     6781 accgttcgga cggcaaaaaa cacgaaacgg cacaaaaaac cgacaaagcg gacaagacca
     6841 aaaccgccga gaaggaaaaa tccggtaaaa aagccgccat tcaggcaggt tatgccgaaa
     6901 aagaacgcgc cttaagcctc cagcgcaaaa tgaaggcggc gggtatcgat tcgaccatca
     6961 ccgaaattat gaccgacaac ggcaaagttt accgcgtcaa atcaagcaac tataaaaacg
     7021 caagggatgc cgaacgcgat ttgaacaaat tgcgcgtaca cggtatcgcc ggtcaggtaa
     7081 cgaatgaata acctccccgt tgccgacctc ctcgtctccg ccatcatcgc cgcctgcatc
     7141 gtcatttcca cgatgcgcgg cgtgattgcg gaggcaggtt cgatggcggc atgggtggtt
     7201 tccttctttt tcgccaaact ctttgccgcc tccttcgccg acctcgcctt tgcctcgttc
     7261 caaccccgcc tgtttgcatt ggctctgtcg ttcatttccc tgttcgtcat tgcctgtctg
     7321 atccagaaaa tgctccgttc gctgctgacc ggcgcagttt cggcggtcgg tttgggcttt
     7381 gccaaccgca ttttgggcgg cgtattcggt gcattgaaag gcgttttgat tgttaccctg
     7441 ctgatcatgc ttgcttcaaa aaccgacctg cccgataccg aagaatggcg gcaatcttac
     7501 acactgccgt ttttcgtatc gctttccgaa gcagtgttaa agcatgcgga caacagggat
     7561 ggagctttgg aagacgattg attgccatac ggatatttca gacggcattc tcttttatgc
     7621 cgtctgaaat gtttttttcc tttcctcagc catatcacag attaaatctt atcctccata
     7681 aacccaccta tctgtccttc gctcaaatat tgtcaacaat tcaggcaaaa aaccaccgtt
     7741 tgctttataa ttccgttcta cccttaaacc tcgaatcgga gaagacgata tgtgcggcgt
     7801 attaggtttg gtcagtcatg aacccgtgaa ccagcttctg tacgacggtt tgcagatgtt
     7861 gcagcacagg gggcaggatg cggcgggcat tgcaacggcg gaaggcggca ccttccatat
     7921 gcacaaaggc aaagggatgg tgcgcgaagt gttccgcacg cgcaatatgc gcgatttggt
     7981 cggcaacgcc ggcatcgccc acgtccgtta tcccacggcg ggcaacgccg gcagcagcgc
     8041 ggaggcgcag cctttctacg tcagctcgcc gttcggcatc gttttggcgc acaacggcaa
     8101 cctcaccaac actgccgaac tgtatgaaaa cgtgtgcaac aaacacctgc gccacgtcaa
     8161 caccagctcc gattccgaag tcttgctcaa cgtattcgcg cacgaattac gccgcgaagt
     8221 ctctaaaaac gccgacccgc accggctcaa tgccgacaat attttcaacg ccgttgccga
     8281 agtccaccgc ctggtgcgcg gcgcatacgg cgtggttgcc atgattgcgg gctacggtat
     8341 gcttgccttc cgcgaccctt acggcatccg cccgctggta ttgggttcgc aaaccgacaa
     8401 cgaaggcagg aaatcctatg cagtcgcctc cgaatccgtc gccttcaacg cgcttaccta
     8461 cgatttggaa cgcgatatcc ggccgggcga agcggtattt gtcggctttg acggcacaat
     8521 catcacccga caatgcagcg accgcgccaa actcagcccc tgcctttttg aatatgttta
     8581 ttttgcccgc cccgactccg taatcgacgg cgtatccgtt taccagtcgc gcttggatat
     8641 gggcgtgtcc ttggcggaaa aaatcaaacg cgagctgccc gtggacgaca tcgatgtcgt
     8701 gatgcccatt cccgacacca gccgccccag cgcgatggag cttgccgtcc acctcgacaa
     8761 accctaccgc gagggcttga ttaaaaaccg ctatatcggc cgcaccttta ttatgcccgg
     8821 ccaggcgacg cgcaaaaaat ccgtgcgcca aaaactcagc ccgatggaaa ccgagtttgc
     8881 aggcaaaagc gtgttgctgg tggacgactc catcgtgcgc gggacgacca gccgcgaaat
     8941 cgtcgaaatg gtacgcgcgg cgggcgcgcg caaagtctat atcgcctccg ccgcccccga
     9001 agtgcgctat cccaacgtat acggcatcga tatgcccacg cgcgaagagt tgattgccaa
     9061 cgggcgcagc gcggcggaaa tcgccgccga aatcggcgcg gacggcatcg tgttccaaaa
     9121 tttgagcgat ttggaagccg tcgtcaaagc actcaatccg aaaatcgaat ccttcgattc
     9181 gtcctgtttc aacggcattt atcagaccgg cgacatcgat gatgcctacc tcgaccgcct
     9241 gtctgccgag aaatccggct gcggcggcct gaaaatccac ccgagcaggg tggaacacag
     9301 catcagcatc agcgatgcgg gcgacgaaga ataaggcttc ccaaaccgcg atgccgtctg
     9361 aaatccgaac gccgggtttt cagacgacat ttcccatatc ggcatcacat ttcccatttc
     9421 atccgcacgc aatatgagta ccgaaaccaa aaactacatt acacccgccg gctggcaggc
     9481 attgaaagac gaactttacc ggctggtcaa caaagaacgc cccgaaatcg tccaaatcgt
     9541 caattgggcg gcaggcaacg gcgaccgcag cgaaaacggc gactatcttt acggcaaacg
     9601 ccgtatgcgc gaaatcgacc gccgcatccg tttcctgacc aagcgtttgg aggctgccgt
     9661 cgtcgtcgat cccgaattgc gcgaagcgac cgaccaagta tttttcggcg cgacggtcgg
     9721 gctgttgcgc ggcgacgggc gcgagcaaac cgtcaaaatt gtcggcatcg atgaaatcga
     9781 taccgcgcaa aacaaaattt cttggatttc gccgttggcg cgttgcctga ttaaagcgcg
     9841 cgaaggcgac gaagtggttt tgaacacgcc ggaagggcgt gaggaaattg aaatcctttc
     9901 tgtcgaatac atcaaaatcg actgatcggg aatgccgtct gaaacggcac aaacgcatcg
     9961 tttcccaaat aaaggaatac cgaatgagga aaatccgcac caaaatctgc ggcatcacca
    10021 cactggaaga cgcagcggcc gccgcagcgg caggtgcgga tgccgtcggg ctggtctttt
    10081 tccaaggcag cagccgggcc gtcgatattg cccgcgcaaa aaaaatcacc gccgcactgc
    10141 cgccgtttgt cagcgttgtc gcccttttcg tcaacgaaag cgcgcaaaac atccgccgca
    10201 tccttgccga agtgccgata cacatcatcc aattccacgg cgacgaagac gacgcattct
    10261 gccgccagtt cgaccgcccc tatatcaagg ccattcgtgt tcagacgaca tcagacatcc
    10321 gaaacgccgc cgaccgcttc cccgacgctc aggcactgct tttcgatgcc taccatcctt
    10381 cggaatacgg cggcaccgga caccgcttcg actggacgct gctggcggaa tattcgggca
    10441 aaccgtgggt acttgccggc gggctgaccc ctgaaaacgt cggcgaagcc gtccgcatca
    10501 ccggagcgga agcggtcgat gtatccggcg gcgtggaagc gtctaaaggc aaaaaagacc
    10561 cagccaaagt cgccgccttt atcgcaaccg ccaaccgcct atcccgttaa agcaacaaaa
    10621 attgccgccg gaatgactta tagtggatta acaaaaacca gtacggcgtt g
//
LOCUS       DAWEYF010000063        10601 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.063, whole genome shotgun sequence.
ACCESSION   DAWEYF010000063 DAWEYF010000000
VERSION     DAWEYF010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10601
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.063"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WGN93_001118"
     CDS             complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WGN93_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ0227029.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDAAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1176..1427)
                     /locus_tag="WGN93_001119"
     CDS             complement(1176..1427)
                     /locus_tag="WGN93_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227030.1"
                     /translation="MPLDGIFGGGRQISGGAKGNARHSAKPPIAADTAFRAAPLRRFP
                     TYPICSEHIYEKEKNTAAGNLFGGFVCLYGDGGTPAPGK"
     gene            complement(1468..2895)
                     /locus_tag="WGN93_001120"
     CDS             complement(1468..2895)
                     /locus_tag="WGN93_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ0227031.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDAAACLLNDIRKDILDCRYCG"
     gene            3081..6779
                     /gene="mfd"
                     /locus_tag="WGN93_001121"
     CDS             3081..6779
                     /gene="mfd"
                     /locus_tag="WGN93_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ0227032.1"
                     /translation="MTYPIPKPREKSRWSNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHTLPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPPGKSNLHGQIQQQPAPSP
                     VGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIG
                     DPVVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHE
                     NIALHKLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADG
                     FGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAV
                     LAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHK
                     LVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGL
                     RDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRER
                     LETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIIN
                     RADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLA
                     MQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEI
                     KLHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIE
                     SHHLRLMAKELGIDAIDAAGEAVTVTFGKNNNVDPTEIILLIQNDKKYRLAGADKLRF
                     TAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            6928..7311
                     /locus_tag="WGN93_001122"
     CDS             6928..7311
                     /locus_tag="WGN93_001122"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ0227033.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7333..8175
                     /gene="kdsA"
                     /locus_tag="WGN93_001123"
     CDS             7333..8175
                     /gene="kdsA"
                     /locus_tag="WGN93_001123"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ0227034.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCTHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPYQCQPV
                     AEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEADNGKL
                     ILCERGSSFGYDNLVVDILGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            8190..8630
                     /locus_tag="WGN93_001124"
     CDS             8190..8630
                     /locus_tag="WGN93_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ0227035.1"
                     /translation="MMQTFRKISRYVATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAILTRLQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSMIFMATALLSAVLSWRLSGKDAV"
     gene            8678..9964
                     /gene="eno"
                     /locus_tag="WGN93_001125"
     CDS             8678..9964
                     /gene="eno"
                     /locus_tag="WGN93_001125"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ0227036.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYNLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            9979..10257
                     /gene="ftsB"
                     /locus_tag="WGN93_001126"
     CDS             9979..10257
                     /gene="ftsB"
                     /locus_tag="WGN93_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ0227037.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10298..10588)
                     /locus_tag="WGN93_001127"
     CDS             complement(10298..10588)
                     /locus_tag="WGN93_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ0227038.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         2541 a         3091 c         2707 g         2262 t
ORIGIN      
        1 tgcaaaaatg ccgtccgaac cgaaacgtgg ttcagacggc attttatagt ggattaacaa
       61 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcaaggcaac
      121 gccgtactgg tttaaattta atccactata aaaaacatta caatcccggg ccgccaagcg
      181 aattggcaat gtccctgacc gccgttacat acatccgact gtgattgtac tgccataccg
      241 tataaaaatt gttcaagccc aaataatatt caaacacgcc gggtgcggtt tccagtttga
      301 acaaaaccgc cttttcatca tctgcaagct cttcgccggg gatgatgccg tacgccttta
      361 aatccgccac cgtccgcgtc agggcggttt tttcgccaat gattgcctga acatccgcac
      421 ccggcgccaa tgttgcagac accagtattt tcccgcccgt gcgccaaccg tgctgcttca
      481 tataattggc aaccgatgcc gcgacatcgc cgatgttgcc ccatatgtcc cgatgtccgt
      541 ccccgtcata atccaccgcc catttccggt agctcgaagg cataaattgc ggcatcccca
      601 ttgcgcccgc atagctgcct ttaaaggcga aaacatcgcc gccttcttct tttgccagct
      661 ttaaaagctc gaccaattct ttttggaaaa acccggcgcg gcgggggtaa tcaaagccta
      721 aggtcgccaa tgcgtccgcc acacggaaac tgcccgtatt tttgccgtaa ttcgtttcaa
      781 tcccgataac cgccacgata agttcggcag gcacgccgta tttttgcgcc acatcatcga
      841 taagcgcgcg gttttccgca taaaaccggc gcgcgccgcg aaatttcgcc ttgcccgaat
      901 ttcccgtgcg gaacacatac cacggacgcg atgtggaggg gcggtgcata atcttgacga
      961 tgtccgcctt gtaagccgct ttgtcaaaaa aatcctgcca ttccgcccgg gaaaaatccc
     1021 ctttcccgac ttcatcgtcc acaaaacggc ggacatttgc attggcggca aacccgctgt
     1081 cggataccgg tacggctgcc gcgtcaaata cggctgccgc gtcaaacgcg gggcggcttt
     1141 cttttttcat ttcatccgcg cggggggctt gggcttcatt tgcccggggc gggcgtgcct
     1201 ccatcgccgt acaggcagac aaagccgcca aacaaattgc cagcggcagt atttttctct
     1261 ttttcataaa tatgttccga acaaataggg taagtgggaa agcggcgcaa gggcgcggcg
     1321 cgaaatgcgg tatccgccgc aatcggcggc tttgcagaat gccgcgcgtt gccttttgcg
     1381 ccgcccgaaa tctgcctgcc gccgccgaaa atgccgtcta aaggcacttc ccctttcaga
     1441 cggcattgcc tgcgccgtat ttgcccgcta tccgcaatat cggcagtcca atatgtcttt
     1501 gcggatatcg ttcagcaggc aggctgccgc gtcttcgtgt tccgcctgta cgaagacaaa
     1561 gagtcgggcg atgattttgc cgataaagac tttttgcagg gcgcaggcgt cggtcagcgt
     1621 gtgttcctgc aggaagctgc ggatgtcttc gggtaaggtg taatcacggg caacggcggc
     1681 aaagcgggca tcggtttgca ggcggtcgag cagggtttgg tttttgtcca acttcatgcc
     1741 tgcttctttt tcttcggcgg tggcgcggac aaactggtcg taaatttcgg cataaagcat
     1801 atcgttcggg ccttcaaaaa tcgtgaaggg gcggatgtcg atagcgatat tgccggcggt
     1861 gtgtccgcgt tcaaaaccct tcgcgcccaa gagtttttgc aacatttgcg cggcggcgta
     1921 agtgtattcc gtggcgaggg ttttgacgat gttcgcctcc atcagctgat gggcgacggg
     1981 ggcaacaggc gaaacggaat ggcagacgta gcggtaaaga atctcggaaa cctgatggcg
     2041 gcgccggatt tcgcggcgtt cgtaatcgac gaatctgatg tcgttgcgga cgtatcgttc
     2101 caggttttca aggatgtatt ccataatgcc gtgcgtcatg ccgatcagtt gcaggcggct
     2161 gcggataaag atgttttgga acgcgcgcaa accggcagcg tcgctctggg agagtttcat
     2221 cacggcggtt gcaggcattt cggcatcgat gcggttgacg gcgtaacgga cggcgcgcaa
     2281 gccttcggat gcgagggttt cgcagcggat gtatgttttg gggacgagca gcaggtcgat
     2341 gactttggcg agtttgccgt ttttgcgttc tttggcggca acgaggagga agtcgctttg
     2401 cgagttgccc tgccagtatt ttgcggcgtt gacgtaaatg gtttgtccgt cggtatattc
     2461 gtagtaagac tgcatttctc gggcaatcgc cgcgccggag gtttcgggtt cggtaacgcc
     2521 caaaccaccg ccctcgcctt tgaaaaccat gtccaaaccc tgtgcgattt gcgcttcatc
     2581 gccgaactct tgcagtggct gcaacaccag cgcgccttcg atgccggtac gcagcgtaac
     2641 gggcacgccg taatgccccg caatccgcaa gacttcctga atttcaaact ggctgccctt
     2701 gcgcccgccg tgttttttgt cgaggaaggg caacagcaaa cccgcctgct tcaaggcaag
     2761 ccatttgtct tcgggcaggt atcgcatcag gtcgataccg tctgaaaaaa tgcggcggaa
     2821 tgcggattcg atgtgcttta aaaaagcagc cgtgtccata gttgacggct gcgcgctcgg
     2881 ttcggtgtgt atcatcggct tcctctgtcg gttcccatta atcggcggcc ggtcaaaccg
     2941 cctgccacag tttagagttg attttctaaa ctttaccaca aagtgcgccg ggcaacaatc
     3001 cgccgacctt tcagacggca tcgcgccccc ctcccgtgct aaaatgaccg tttgcatcac
     3061 tgtccgccga ttgccgcact atgacctacc ccatccccaa accccgtgaa aaatcccgtt
     3121 ggtccaatct ttcgcaaggc tcgctgccct tggctttggc gcgttatctg ccgcataagc
     3181 ggctcaaggt cgtgctgacc caagatgcgg aacaggcgct acgccttcag acggcatggc
     3241 ggtttttccg tccgcacgac acggcggtgt tcctgccgga ctgggaaacg ctgccttacg
     3301 agcgtttttc gccgcatcag gatttggtgt cggaacggct gtcggcgttg tggcagatta
     3361 agagcggcgc ggcggacgtg ttgttcgtgc cggttgccac ggcgatgcag aagctgccgc
     3421 ccgtgccgtt tctggcaggg cgcacgtttt ggctgaaaac agggcagact ttggatatag
     3481 gccgtctgaa aaccgatttg gtagatgcgg gctacaacca tgtttcccat gttgttgcgg
     3541 cgggcgagtt tgccgtgcgc ggcggcattg tcgatttgtt ccccatgggc agcgaaatgc
     3601 cctatcgcat cgatttgttt gacgatgaaa tcgacagcat caaaaccttt gatacggaca
     3661 cgcagcgcac catctccccc gtttccgaaa tccgcctgct gccggcacac gagttcccca
     3721 ccgacagcga ggcgcaaaag attttccgca gccgcttccg agaagaagtc gacggtaatc
     3781 cgaacgatgc ggctgtatac aaagccgtca gcaacggcca tttcggtgca ggcgtagaat
     3841 attatctgcc actgtttttt gaaaacgagc tggaaacgct gtttgactat atcggcgaag
     3901 atgcgctctt tgtctctttg ggcgatgttc atgccgaggc aaaccgcttt tggagcgacg
     3961 tcaaatcgcg ttacgccatg gcgcagggcg acgaaaccta tccgcctttg cttccacagc
     4021 atttgtatct ctctgctgat gtttttgcag gccgtctgaa aaactacgga caagtgctgc
     4081 ccgatgtttc cggcaaggaa cacaccctgc ctgaccttgc cgtcaaccgc caatccgacg
     4141 agccgttgca ggcattgaag gattttcaga cgacctttga cgggcggatt ctgctgtgcg
     4201 ccgaaagctt gggacggcgc gaaaccatgc tcggcttctt gcagcaaaac ggcttgaaag
     4261 ccaaacctgt gtccgactgg cagggctttt tatcggcgca tgagccgctg atgattacag
     4321 tggcgccgtt ggcttacggg tttaaactgg gcggactgca atcgccgaac caacagcaaa
     4381 ctacttccgc ctccgaagga gaaggcgatg cggttaccga ccaaaccgaa ttttccgcat
     4441 ccgcaacaaa ccctctccct agccctctcc cacaggagag ggaacaaagt gcagccgccg
     4501 tttcagacag tctgaaagca gccgccgttt caaccgaaag cagcctgccc cccggtaaaa
     4561 gtaatctgca cgggcaaatc caacagcaac ctgccccctc ccccgtgggg gagggttggg
     4621 gagagggcaa agcagttgcc gctcaaagtg ccatcgccgt catcaccgaa tccgatctct
     4681 accaatacgt cgcccgttcg cgcgtccaca accgccgcaa gaaacacgcc gccgtttcag
     4741 acggtctgtt gcgcgacctt gccgaaatca acatcggcga ccccgtcgtt cacgaagaac
     4801 acggcatcgg gcggtatatg ggcttggtaa cgatggactt gggcggcgaa accaacgaaa
     4861 tgatgttgct cgaatacgca ggagaagcgc agctttatgt gcctgtttca caactgcatt
     4921 taatcagccg ctactccggt caggcgcatg aaaacattgc cctgcacaag ctcggcagtg
     4981 gcgcgtggaa caaggcgaag cgcaaagccg ccgaaaaggc gcgcgatacc gccgccgagt
     5041 tgcttaacct ttacgcccga cgcgctgccc aatcgggaca caagtttgaa atcaacgagt
     5101 tggattatca ggcgtttgct gacggcttcg gctacgagga aaccgaagac caggccgccg
     5161 ccatcgccgc cgtgattaaa gatttgacgc aagcgaagcc gatggatcgc cttgtgtgcg
     5221 gcgatgtcgg cttcggcaaa accgaagttg ccctgcgcgc cgcgtttgtg gcggtgatgg
     5281 gcggcaaaca ggtcgccgta ctcgccccga ccacgcttct ggtcgagcag cacgcgcaaa
     5341 actttgccga ccgtttcgcc gatttccctg tgaaagtcgc tagcctttcg cgtttcaaca
     5401 acagcaaagc cactaaagcc gcgctggaag gcatggcgga cggcacggtc gacatcgtta
     5461 tcggcacgca caaactggtg caggacgaca tcaaattcaa aaacttaggt ttagtgatta
     5521 tcgacgaaga acaccgcttc ggtgtgcgcc aaaaagagca gctcaaacgc ctgcgtgcca
     5581 atgtcgacat cctcaccatg accgccacgc cgattccgcg tactttaagt atggcgttgg
     5641 aaggactgcg cgacttctcg ctgattacca ccgcgcccag ccgccgcctc gccgtcaaaa
     5701 cctttgtcaa accctttagc gaaggcagcg tgcgcgaagc cgtgttgcgc gaactcaaac
     5761 gcggaggaca ggtatttttc ctgcacaatg aagtagatac gattgaaaat atgcgcgagc
     5821 ggctggaaac cctgctgccc gaagcccgca tcggcgtggc gcacggacaa ctgcgcgagc
     5881 gcgagctgga acaagtcatg cgcgactttt tacagcaacg attcaacgtg ttgctctgtt
     5941 ccaccatcat cgaaaccggt atcgacattc ccaacgccaa caccatcatc atcaaccgcg
     6001 ccgacaaatt cggactggcg caactgcacc agcttcgcgg gcgcgtcgga cgcagccacc
     6061 accaagccta cgcctacctg ctcacgcccg aatacatcac caaagacgca gaaaaacgcc
     6121 tcgacgccat cgcggcagca gacgaactcg gcgcaggttt caccctcgcc atgcaggatt
     6181 tggaaatccg cggcgcaggc gaaatcctcg gcgaagggca gtccggcgaa atgatacagg
     6241 tcggcttcac gctctacacc gaaatgctca aacaagccgt gcgcgatctc aaaaaaggcc
     6301 gccaacccga cctcgacgcg ccgctgggca tcaccaccga aatcaaactg cacagccccg
     6361 ccctactgcc cgaaagctac tgccccgaca tccacgagcg tctcgtcctc tacaaacgcc
     6421 tcgccgtctg cgaaaccgtg cagcaaatca acgccataca cgaagaactc gtcgaccgct
     6481 tcggcctgcc cgaacaaccc gtcaaaaccc ttatcgaaag ccaccacctg cggcttatgg
     6541 caaaagaatt gggtatcgat gccattgatg cggccggcga agcggtaacg gtaaccttcg
     6601 gtaaaaacaa taatgtcgat ccaaccgaaa tcatcctgct gattcagaac gacaaaaaat
     6661 accgccttgc cggcgccgat aagctgcggt ttaccgcaga gatggaaaat atcgaggtca
     6721 gaatcaacac cgtaaaaaac gttttaaaaa ccttgcaaaa cagatgcctg cccaaataaa
     6781 gccgacaccg caatgccgtc tgaaacaccg ttttccttgt ccgaaagccg ccattatgaa
     6841 tttgaaggaa actccactat aatacggcat tcagatttcc agacggcatc gcgcccgtca
     6901 gaccgcacac aaaccaaaag gaaatacatg ttccgtacta tgcttggcgg aaaaatccac
     6961 cgcgccaccg taaccgaagc cgatttgaac tacgtcggca gcattaccgt cgatcaagat
     7021 ctgttagacg cggcaggcat ctaccccaac gaaaaagtcg ccatcgtcaa caacaacaac
     7081 ggcgaacgtt ttgaaaccta taccatttca ggtaaacgcg gcagcggcgt gatttgtctg
     7141 aacggtgctg cggcaaggct ggtgcagaaa ggcgatatcg tcatcatcat gtcttacgtc
     7201 caactctccg aacccgaaat cgccgcgcat gaacccaaag tcgtcttggt agacggaaac
     7261 aacaaaatcc gcgacatcat ctcctacgag ccgccgcaca ccgtgctgta accctgaaaa
     7321 cggacattga tcatggatat taaaattaac ggcattaccg tcggtaacga tgctcctttc
     7381 gtactgttcg gcggcatcaa cgttttagaa gatttggatt ccaccctcca aacctgtacg
     7441 cattacgtcg aagttacccg aaaactcggt attccctata tctttaaagc atctttcgac
     7501 aaggcaaacc gttcctccat ccattcttat cgcggcgtag gcttggaaga aggcttaaag
     7561 atttttgaaa aagtcaaagc ggaattcggc atccccgtca ttaccgacgt acacgaaccc
     7621 tatcagtgcc aacccgtcgc cgaagtgtgc gatgtcatcc agcttcccgc attccttgcg
     7681 cggcagaccg atttagtggt tgccatggca aaaaccggca acgtcgtcaa catcaaaaaa
     7741 cctcagttcc tcagcccctc tcaaatgaaa aacattgtgg aaaaattcca cgaagccgac
     7801 aacgggaaac tgattttatg cgaacgcggc agcagcttcg gctacgacaa cctcgttgtc
     7861 gatatactcg gtttcggcgt gatgaaacag acttgcggca acctgccggt tattttcgac
     7921 gttacccatt ccctgcaaac ccgcgatgcc ggttctgccg catccggcgg tcgtcgcgca
     7981 caggctttgg atttggcact tgcaggcatg gcaacccgcc ttgccggtct gttcctcgaa
     8041 tcgcaccccg atccgaaact ggcaaaatgc gacggcccca gcgcgctgcc gctgcacctt
     8101 ttagaagatt ttttaatccg catcaaagca ttggacgatt taatcaaatc acaaccgatt
     8161 ttaacaatcg agtaacacgg tttcgcctta tgatgcagac tttccgaaaa atcagccggt
     8221 atgtcgcaac cttgtggctc ggtatgcaga ttatggcggg ttatatcgcc gcaccggtgc
     8281 tgttcaaaat gctgcccaaa atgcaggcgg gcgaaattgc cggcgtattg ttcgacatcc
     8341 tctcttggag cgggcttgcc gtttggggcg cggtgttggc tgccgccttt gccatcctga
     8401 cccgactgca aaccgccctg ctgctttttt tattgtccgc ccttgccgcc aaccaatttt
     8461 tggttacccc cgttatcgag gcactgaaat acgggcatga aaattggctg ttgtcgtttg
     8521 taggcggatc cttcggaatg tggcacggta tttcaagcat gattttcatg gcaaccgccc
     8581 tactttcagc agttttaagt tggcggcttt ccggcaaaga tgccgtctga agccctccca
     8641 tttttttacc tcccttcact tcacttggag aacattcatg agcgcaatcg ttgatatttt
     8701 cgcccgcgaa attttggact cacgcggcaa ccccacagtc gagtgtgatg tattgctcga
     8761 atccggcgta atgggacgcg cagccgtacc gagcggcgcg tccaccggtc aaaaagaggc
     8821 tttggaactt cgcgacggcg acaaatcccg ttattcgggc aagggcgtat tgaaggcggt
     8881 cgaacacgtc aacaaccaaa tcgcccaagc cctcattggt atcgatgcca acgagcaatc
     8941 ttatatcgac caaatcatga tcgaattgga cggtactgaa aacaaaggca atttgggtgc
     9001 gaatgcgact ttggcggttt ctatggcggt tgcacgcgcc gctgccgaag actcaggcct
     9061 gccgctttac cgctacttgg gcggcgcagg cccgatgtcc ctgcccgtac cgatgatgaa
     9121 cgtcatcaac ggcggcgaac acgccaacaa cagcctgaac atccaagagt ttatgattat
     9181 gcccgtcggc gcaaaatctt tccgcgaagc gttgcgctgc ggtgcggaaa ttttccacgc
     9241 cttgaaaaaa ctgtgcgaca gcaaaggctt cccgaccaca gtcggcgacg aaggcggttt
     9301 cgcccccaac ctgaacagcc acaaagaagc cctgcaactg atggtcgagg cgaccgaagc
     9361 cgccggctac aaagcgggcg aagacgtatt attcgcattg gactgcgcct ccagcgagtt
     9421 ctacaaagac ggcaaataca acttggaagc cgaaggccgc tcctacacca acgcggaatt
     9481 tgccgaatat ctggaaagtc tggtcaacga gttccccatc atctccatcg aagacggcat
     9541 ggatgaaaac gactgggaag gctggaaact gctgaccgaa aaactgggcg gcaaagtcca
     9601 actcgttggc gacgacctct tcgttaccaa cccgaaaatc cttgccgaag gcattgaaaa
     9661 aggcgtggca aacgcactat tggtcaaagt caaccaaatc ggtactttga gtgaaaccct
     9721 gaaagccgtc gatctggcaa aacgcaaccg ctacgccagc gtgatgagcc accgctccgg
     9781 cgaaaccgaa gacagcacca ttgccgactt ggcagtcgcc accaactgta tgcagatcaa
     9841 aaccggttct ttgagccgtt ccgaccgcat ggcgaaatac aaccaactgc tgcgtatcga
     9901 ggaagaattg gcggaagccg ccgactaccc cggcaaagcc gcattctacc aactgggcaa
     9961 ataagaaaag gttaaggtat gaagtgggta actgtcgttt tatccttcgc acttgtctgt
    10021 tgccaataca gcctctggtt cggcaaaggc agcatcggac gcaacagcag tctgagagaa
    10081 cagattgccg ttcaagaaga aaaaaaccag acactcgccc tacgcaatca ttcccttgcc
    10141 gccgaagtct atgatttgga aaacggtcaa gaagccattt cggaaatcgc ccgggtagaa
    10201 ctgggttata tccaagacgg tgaaaccttt taccgactca tcaggcataa ccggtaatac
    10261 cgtcaaaaag ccgtccgaac caatgttcgg acggctttta tttcaacaaa ctgtcagaca
    10321 gcccctcatc ctcccccgac aaaccgcaat ccagcctgac atccccctcg acgcaacagc
    10381 agcacggcag tatctcgtcc cgccccaaaa aagccaaagg cggctcccga taagtaacgc
    10441 ttccctccaa aatcttcacc cggcacgatc cgcaatatcc gcttcggcac tgatattcca
    10501 ccatatgccc cgtccgttcc aagccttcca acagggtctc gccctccaag agctcaaaaa
    10561 aacccttatt cgtaccaatg cgcgccattt ccgaccaatc a
//
LOCUS       DAWEYF010000064        10434 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.064, whole genome shotgun sequence.
ACCESSION   DAWEYF010000064 DAWEYF010000000
VERSION     DAWEYF010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10434
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.064"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            140..322
                     /locus_tag="WGN93_001128"
     CDS             140..322
                     /locus_tag="WGN93_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227039.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(384..1385)
                     /locus_tag="WGN93_001129"
     CDS             complement(384..1385)
                     /locus_tag="WGN93_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ0227040.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1462..5295)
                     /locus_tag="WGN93_001130"
     CDS             complement(1462..5295)
                     /locus_tag="WGN93_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ0227041.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGNEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALIREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHNGVEFVELAGLDGKHPIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKTRWEWLLANLDTPLADYKARYGAA
                     VHAAPEAKDDESCFIAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLTDEDLQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSNLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELADIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKVLRAAMIQTGFPAQNFAYKIGKLLPVGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKNVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5556..5652
                     /gene="ffs"
                     /locus_tag="WGN93_001131"
     ncRNA           5556..5652
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WGN93_001131"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5820..7511
                     /gene="dld"
                     /locus_tag="WGN93_001132"
     CDS             5820..7511
                     /gene="dld"
                     /locus_tag="WGN93_001132"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ0227042.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGRALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNQQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKVSFLPKHFSDKAMQFVSKFLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHGGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            7643..7750
                     /locus_tag="WGN93_001133"
                     /pseudo
     CDS             7643..7750
                     /locus_tag="WGN93_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7806..8177
                     /locus_tag="WGN93_001134"
     CDS             7806..8177
                     /locus_tag="WGN93_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ0227043.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8332..8880
                     /locus_tag="WGN93_001135"
     CDS             8332..8880
                     /locus_tag="WGN93_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ0227044.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLAQTEINPELQAYA"
     gene            9010..10101
                     /locus_tag="WGN93_001136"
     CDS             9010..10101
                     /locus_tag="WGN93_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ0227045.1"
                     /translation="MNAQTLIANVAELVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDK
                     YLADILQGKVLAGTGMSNTVKHLAGIEKHNLQAERVEGGYTVNGALPWVSNIGEEHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANIVNAEVNSYLDDGYDSLKARLD
                     GAWAETERLAGLAWSGTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
BASE COUNT         2416 a         2875 c         2825 g         2318 t
ORIGIN      
        1 attttgcaaa ggtctctatt tgtactgtct tcggctcgcc gccttgtcct tatttaaatt
       61 taattcacta tatttgcccg tgcgtttgtg ataaattcgg cactgtattt gatatgattt
      121 taacaaatcg ggaggggcaa tgttttggta tgtaatcggc ttttgctcct ttgtcgtcgc
      181 gctgctgtcg ctgtgggtca atgtcggcgc attcggtatg caggaagacg ataccccgca
      241 atcggattat gaaaaacgtt tgggcttggg tgcgaagctg aaaaacaaaa atacgccgga
      301 tacggaagaa aagcagcaat aaagatatga aatgccgtct gaaagatttt cagacggcat
      361 ttgctttgaa gcatgggaga cagtcaaaca tttatctcat gctcaaatgc gttcaggatt
      421 cggcggactt catccgcatc cttaaccgtt cggacgcggt caaacagcgt ttgcgccggg
      481 tcgaacgttt ttttcatcat gcccaaccat tgcttaagac gggcgatcgg gtatttattg
      541 tttgcctctt ttgtcaggca cagctcgaaa aactgccgta tccatttgga aacttcggca
      601 aaatccgtgt ctttgaccgg cccgccgttc tcgtattgct tgatttgccg cgccaaatcg
      661 gggcggatga ccgcgccgcg accgagcatc acgctgttgc agccgctgat tgttttgatg
      721 ccgatatagt cttgcaggct gaaaacgtcg ccgttggcgg taacgggaat attgacgctg
      781 tctcggattt tccttatcca ttcccaatgc gccggcggtt cgtaaccctc ggctttggta
      841 cgcgcgtgta cggtcagtcc gcatgcgccc ccttcggcaa tcgcacaggc gcattccaaa
      901 gcccggcttt tgtcttcgta accgagccgc atttttgcgg tgagcggaat atgtgcgggc
      961 aaacgtccgc gcagcgtttt gacgatgtgg aatatcagtt ccggctcttt taaaaggatt
     1021 gcgccgcctt tgtgtttgtt gacggtgggc gcggggcagc cgaagttcaa atcgattttg
     1081 ttcgcaccga agcggacggc ttccagcgca ttcgccgcca tattgtccgc atcgctgccc
     1141 aaaagttgga cggtgcaggg cgtgccggaa aacgttttgt ttccgttggc gatttcgggg
     1201 acatatttta accatatgga tcgggaatgc acggtatggg taatgcgtac aaattcgctg
     1261 acgcattcgt cgtagccgcc aatacgcgtc agcaggtcgc gcatcacgtc atcgaccaga
     1321 ccctgcatag gggcaaggat gattcgggtt ttttgtttgg gttcggttgt ttgtccgtca
     1381 atcatgattc gggtaggtat ttgattcaaa caatgccgtc tgaaggcttt cggcgttcag
     1441 acggcatttc cgtgtccgtt gttacagcaa tactttttcc acgccgccgt tgttggcttt
     1501 tttgacgaac tcgtccagcc agttttcgcc gagaatgtgt ttcgccattt caatgactat
     1561 gtagtcggca ggcatattgt tgtcgtcggc gtagcggctc aagccttgca ggcaggcggg
     1621 gcaggaggtc agcattttga cgggttcgcc ctgcggcagc tctttgaggt ttttctcgat
     1681 ttcctcttgt ttgcggaact tgacctgagt ggcgatgtcg ggccgtttga cggcgaacat
     1741 accggactcg ccgcagcagc ggtcgcttaa gacgactttc tgccccatca ggctgctggc
     1801 catttgggtg gcgttcatgg ttttgatggg ggtgtggcag gggtcgtggt agaggtattg
     1861 ctgaccttgc acgccgtcga gtttcacgcc tttttcgagc aggtattcgt ggatgtcgat
     1921 gatgcggcag ccggggaaga tttcttcaaa gcggtatttt tcgagctggt cgtaacaagt
     1981 gccgcaactg acaacgacgg tcttaatgtc gaggtagttg agggtgtttg ccatacggtg
     2041 gaaagccacg cggttgttgg tgctcatttc ttcggcttta gccttgttgc cgcccgcgtc
     2101 ttgcggatag ccgcaacaca tatagccggg cggcaggacg gtttgtacgc cgacgtgcca
     2161 gagcatggct tgaacggcaa gtccgatttg gctgaacagg cgttccgaac cgcaacccgg
     2221 gaagtagaac acggcttcgg catcttcggg cgcggcgggg ttgcggatga tggggatgct
     2281 tttgccgtct tcgatgccca ataaggagcg cggtgttttg gcgggtacgt ttttgggcaa
     2341 aggacggttg atgaaatgga taacctgttc tttaattggg gctttgccga cggttgcctt
     2401 gggttcggct ttttgctttt tcgtgccgac gggcagcagt ttgccgattt tgtaggcgaa
     2461 attctgcgcg gggaagccgg tctgtatcat ggcggcgcga aggactttga tggttttcgg
     2521 gccggtcgcg tttaggaatg ccatacccat tgaagctgcc ggcgcaaagc gtttgtggcc
     2581 ggaatcggca aggtagttgc ggacggctac ggttacgtcg ccgaagtcga tattgacggg
     2641 gcagggtttg acgcagcggt ggcacacggt gcagtggtcg ccgatgtctg ccagttcttc
     2701 aaagtgtttg acggaaacgc cgcgccgggt ttgttcttcg tataagaagg cttcggttaa
     2761 cagccctacg ccgaggattt tgttgcgcgg actgtacagc aggttggcgc gcggaacgtg
     2821 ggtggagcag acgggtttgc atttgccgca gcgcaggcag tctttgacgg aatcggcaat
     2881 cgtgccgagg tttgattttt ccataatcag cgattccgcg cccaacagct cgaaggacgg
     2941 cgtgtaggcg ttgcgtaagt ccgagccttt catcagtttg tggcggttga aggtgtgttt
     3001 ggggtcgact tggtttttgt agtcccaaaa cggctgcaag tcttcatcgg tcaaaaattc
     3061 gagcttggtg atgccgatgc cgtgttcgcc cgaaatcacg ccgccgagcg aacgggcgat
     3121 tttcataatg cgttcgaccg aacggtaggc tgtctgaagc atttcggcat cgtctgagtt
     3181 gaccggaata ttggtgtgaa cgttaccgtc gccggcgtgc atatgcaggg cgacaaagac
     3241 gcggctgcgt acggttttgg cgtggatttt gcccaagcct tggataatct tggtatcggt
     3301 tttgccgctg aagatttcgg caagcggctt cattacgtct gctttgacag aaacgcgcag
     3361 gcggaaatcg cggaaagcaa taaagcaact ttcatcgtct ttggcttcgg gcgcggcgtg
     3421 gacggctgcg ccgtagcggg ctttgtagtc ggcaagcggc gtgtcgagat tggcgagcag
     3481 ccattcccaa cgcgttttga cggcggaaac gtgggctagg gcgtgtttgc cgcgttcgcc
     3541 caacagttcg gcggtcggca ggtcagtgcc cattttgtcg atggggagtt tgcccgaaag
     3601 atattgctcc aaggcggcac agagtttgag cttgttttgg atggaaagct caatgttgat
     3661 gcgttcgatg ccgtccgaat actcgccgag cctttcgagc gggatgacca cgtcttcgtt
     3721 aattttaaag gcgttggtgt gcttggcgat ggcggcggtg cggctgcggt cgagccaaaa
     3781 ggttttgcgc gcttcgggag acacggcgat aaagccttcg ccatcgcggg cgcgggcaag
     3841 ttcgcaaatg tgttcggcgg ctgcctctac ggcggcttcg tcgtcggaaa ccacgtccgc
     3901 cagcaagacc attttcggcc gtcccttgcc cgccgctttg gttgcgtagc cgacggcgcg
     3961 gacgtaacgc cagtccaaat gttccaaacc tgccagccga acgctgtcgt gggcgagcag
     4021 gaaatcgcgg atttcgacga tagaaggcgt agcggtggcg accgtgccga aaaactccat
     4081 acacacagtg cgcgtgtatt tcggcatttt gtgcaacacg aaagcaacgc cggtgatgat
     4141 gccgtccgtg ccttctttct gtacgccggg caggccgctc aagaatttgt cggtaacgtc
     4201 tttgcccaaa ccgactttgc gaaatttgtg gccgggaatt tccaaacgtt cggttttaac
     4261 gatattgagg ccgtctgaat ccagcgtgtg aacgtcgaac acggcggttt cttcgtcgtg
     4321 gattttgccg aaattgtggc gcacgcgctc gatgcgcagc cattcgccct gcgggttgac
     4381 catctgccag taggcgaggt tgtccaacgc cgtcccccac agcacggctt ttttaccgcc
     4441 cgcgttcatc gccacattac cgcccacaca ggacgcatcg gcggaagtcg gatcgacggc
     4501 gaacaccaaa cctgcctgat gcgcggtttc ttccacccgc cgcgttacca cgcccgcgcc
     4561 gcaatggata atcggatgtt tgccatccaa gcccgccagt tcgacaaact ccacgccatt
     4621 atgtttatcc agcttttccg tattgatgac cgcgctcatc gcgtccaaag gaatcgcgcc
     4681 gccggtataa cccgtaccgc cgccgcgcgg gataataacc aaatccagct cgattaaggc
     4741 gcgcaccaaa ggcgcgatct ctgcctcggt atcaggattg acgacgacaa acggatattc
     4801 gacgcgccag tcggttgcat cggtaacgtg cgttacccgc gccaatccgt caaacataat
     4861 attgtgcggc ttggtgattt tgctcaaacg ctccaaaatc tgccgccgct tttggctggt
     4921 ttcatcaaaa ctgctatcaa aacgctcgac tgctttttct gctgcggcaa ccaagacatc
     4981 cacttgccga ttatcgtcgc ggcgtttgcg gatttcgttc aggcggtggc gcatttcgcg
     5041 tatcaacgcg gcgcggcgtt tcggatgctc cagcaaatca tcgaccagat acggattgcg
     5101 cacgaccacc caaatatcgc ccaacacttc aaacagcatc cgcgccgaac gtccagtttt
     5161 acgctgtccg cgcaagtctt gcagaatctg ccacgcttcg ttgcccaaca gtcggatgac
     5221 gatttcgcgg tcggtataag aagtatagtt atagggaatt tcccgaatac gctgcggggc
     5281 ggtagtcgtg gtcatggtgt gtccgtgttt ggcagttttt atttgaatgc cgtctgaaaa
     5341 gtcggtttca ggcgagtttg aaaaggcgat aatgtagttc aatttttgat atttttcaat
     5401 gccgaaacag gaaataccct tatagaaaca aaataacgct ttgagaaatt gttgacaata
     5461 ttatcaaata taaattttag gtggtgtttc cggcgtatga ccgtatcaaa acggttgagt
     5521 ttttcagaaa acccgttata atgccgtttc tctgaggcgg gtctccccgc atggcaaatc
     5581 ggaacaccgg gtcaggggcg gaagccagca gcccactccg atgcgccagt gccgggggtt
     5641 tggcccgccg ccctatttga aacgccggag cttcgatgtt ccggcgttcc cgtatcgcac
     5701 cgatgccgtc tgaaagccgt tcagacggca ttttctttac tttgccataa cgtataacta
     5761 caatgggaaa acaatttcaa tgtgcatatg cacctgccga caattttaag gaaactgcca
     5821 tgagcgcatc acaattactg tcaagactga cccaaaccgt aggcgaaaaa tacatcatta
     5881 ccgaccccgc gaaaaccgaa caataccgcc aaggctaccg cttcggcgaa ggcagggcgt
     5941 tggcggtggt gcgccccgga agcattctgg aaatgtggaa aattctgcag gcgtgcgtcg
     6001 aagcagacgt gattgtgatt acgcaggcgg cgaataccgg actgaccggc ggttcgaccc
     6061 ccgacggcaa cgattacgac cgcgacatcg tgattgtgaa caccatgcgg atgaacatca
     6121 tccaaaccat caacaacaac caacaagtcg tctgcctgcc cggctcgacc ctgaaccagc
     6181 ttgaattgct gctgaaacct ttggggcgcg aaccgcattc ggtcatcggc tcatcctgta
     6241 tcggcgcgtc cgtcttgggc ggcgtgtgca acaactccgg cggcgcgttg gtacagcgcg
     6301 gcccggccta caccgaaatg gcgttgttcg cccaaatcaa cgaagaaggc aggttggaac
     6361 tggtcaacca cttgggcata gacttgggcg atacgccgga agaaatcctg accaacctgc
     6421 aaggtcatca ttatcaaaac aaagacatca aacaagacgc gggcaaagga cacgaccacg
     6481 cctattgcga acacgtccgc caagtggacg aaccgaccgc cgcgcgtttc aacgccgacc
     6541 ccgcgcgcca ttacgaagcc tcgggctgcg cgggcaaact gatggtgttc gccgtccgtt
     6601 tggacacctt cccgcaagaa aaacaaaccg ccgtgttcta catcggcacc aacgacatca
     6661 acgagctgac cgacatccgc cgcgccgcct tgggcgaatt tgaaagcctg cccgtttccg
     6721 gcgaatacat ccaccgccac gctttcgata ttgccgacgt gtacggcaaa gacacgtttt
     6781 acgtcatcaa aaaattcggt acgcaccaac tgccgaaatt atttgacttg aaggcgcgcg
     6841 tggacaggtt cggcaaaaaa gtcagcttcc tgcccaaaca tttttccgac aaggcaatgc
     6901 agttcgtcag caaattcctg cccgaccacc tgcccaaatc catgcgcgat taccgcgaca
     6961 aatacgaaca ccacctgatt ctgaaaatgg gcggaaaagg cgtggatgaa gcgcgcgcgt
     7021 tcttaaaaga atattttgca caccacggcg gcgcgttttt tgaatgcaac gccgaagaaa
     7081 cccaagccgc gatgctgcac cgttttgccg tcgcttccgc cgccatccgc taccgcgccg
     7141 tgcatgatga tgaagtggaa gatttggtcg cgctcgacat cgccctgcgc cgcgacgacc
     7201 gcgattggtt tgaaaaactg ccgccggaaa ttgacaataa aatcatccat aaattgtatt
     7261 acgggcattt tatgtgccac gttttccatc aggattacat catcaaaaaa ggcaacgact
     7321 gcatggcgtt ggaacacgaa atgctgcatc tcttagacca acgcggcgcg caatatcccg
     7381 ccgaacacaa cgtcggtcat ttgtatgaag ccaagcccgc gctcaaacag ttttaccgca
     7441 aactcgaccc gaccaacagc ttcaacccgg gtatcggcaa aaccagcaaa aagaaaaact
     7501 gggcggaata agcgcgtccg ctttgaaggc aggcaatgcc gtctgaaggc aaaacgccgt
     7561 tcagacggca ttgtcgggtt tgaagttccc cgtcgggtaa tcgctttcaa accgtatgcc
     7621 gacacacggg cgcgcccctc ccaaatatag tggattaaat ttaaatcagg acaaggcaac
     7681 gaagccgcag acagtacaga tagtacggca aggcgaggta acgccgtact ggtttaaatt
     7741 taatccacta taaagtctga tcctaccttc ccaaagggca gggtttcaac cgaaaaggaa
     7801 acacgatgaa accatacaaa atctacaccc atcccgccct gccgccccaa gccgtcaaac
     7861 aaggctggtc atggccgggg ctcttgttcg gcacgctgtg ggcgtgtttc aaaagaatgt
     7921 ggggtttggg gctggggctg acgggcgcga tattcgtgct ggctgtgttt gcccaactgg
     7981 tttacggcga cacgcccgcc acagactcgg cgtttaacgt attgggcttg gcggtttccg
     8041 tctggttcgg cgcaaagggc aacagccttt atgcacgcca ccttttatcg cgcggctata
     8101 ccgaattgcc cgaaacggtt gaggcagcca atccccaagc cgcattggcg caatatttcg
     8161 ggcgcggggg ccgataagcg cgttttcttt tccatcgtgc cgtctgaaaa atgttcagac
     8221 ggcatttctt ataacctttc gtttgcagca cataaccaat cagtctttcc tattccgttc
     8281 cgaaatgcat accatgcgcc cgtacccaat atttgcgaac aaggaaagaa aatggcacgt
     8341 ttaaccgtac acaccctcga aaccgccccc gaagccgcca aagcgcgcgt cgaggcggta
     8401 cttcaaaaca acggctttat ccccaacctt atcggcgtat tatcaaacgc ccccgaagcc
     8461 ttggcgtttt accaagaagt cggcaagctc aacgccgcca acagcctgac cgccggcgaa
     8521 gtcgaagtaa tccagattat tgccgcccgc accaaccaat gcggcttctg cgtggcaggg
     8581 cacaccaaac tcgcaaccct gaaaaaactc ctttccgaac aatccgtcaa agccgcgcgc
     8641 gctttggcgg caggcgaatt tgacgatgct aaactcggcg cgctcgccgc ctttacccaa
     8701 gccgtaatgg caaaaaaagg cgcggtatcc gacgaggaac tcaaagcatt ttttgatgcg
     8761 ggctacaacc agcagcaggc agtcgaagtc gtgatgggcg tagccttggc aactttgtgc
     8821 aactacgtca acaacctcgc ccaaaccgaa atcaaccccg aattgcaggc ttacgcctga
     8881 tacggcaaac cgcccgaata tcgggcggtt tttcaacccc cctcaaacaa aaacaagccg
     8941 ccaaacggca gggaagcagc cgcgcatcag gcgtgcgccc gatttccccg caaaccttaa
     9001 ggaacaaaga tgaacgccca aaccctgatt gccaacgttg ccgaactcgt caaaaccaag
     9061 ctcaaaccca tagtggacga catcgaccgc aaaggatact accccgaagc atttatgcgc
     9121 gaactcggcg caatcggcgg attcggcgca gtcggcacag aagccgaagg cggcaacggc
     9181 ttgggtttgg caacgcaaat cgccgtattg cgcgaaatcg gcaaagaatg cggcgcaacc
     9241 tccttcagcg cgtggtgtca ggcggcttgc gcgtggtatc tgcatcaaac gcccaaccaa
     9301 gccgtcaaag acaaatacct cgccgacatc ctgcaaggca aagtattggc aggcaccgga
     9361 atgtccaata ccgtcaaaca ccttgccggc attgaaaaac acaaccttca agccgagcgc
     9421 gtggagggcg gttatacagt caacggcgcg ctgccgtggg tatccaacat cggcgaagag
     9481 catatttggg caaataccgc ccaaatcggc ggcggctacg tcatgtttat caccggcgga
     9541 caatgggaag gcgtaagcct gcaaaactgc cccgaatttt gcgccctcga aggcacgcgc
     9601 accttcagcc tgaacttcaa agacgtattt atccccgacg aagacatcat cgccgcgccc
     9661 gaacagtttg ccgactacat ccaaagcatc aaagcaggct ttatcctcct gcaaatcggc
     9721 atcggcgcgg gcgtgataga cggcagcctc ggcatcatcc gcctcgccaa catcgtcaac
     9781 gccgaagtca acagctatct cgacgacggc tacgacagcc tcaaagcaag gctggacggc
     9841 gcgtgggcag aaaccgaacg gctcgccgga ttggcttgga gcggcacgcc cgacaacctt
     9901 gctaccctca agttgcgcga agccgccgcc gtactggcac ttgccgccgc ccaatccgcc
     9961 gccctgcatt ccggcgcaaa aggctacctg atgcgcagtc ccgcccaaag gcgcgtccgc
    10021 gaagcaatgt ttgtcgccat cgtaaccccc gcgatcaaac acctccgaaa agaaatagcg
    10081 gcaatcgaag ccgcaaaata aacaggcgga aaaaaccgaa acccccaccg cgtcattccc
    10141 gcgaaagcgg gaatccagcc cccaacgcaa caggaatcca tcggaaaaaa cagaaacccc
    10201 caaaccgtca ttcccgcaaa agcgggaatc cagcccccta acgcaacagg aatccatcga
    10261 aaaaaccgaa acctccaaac cgtcattccc acggaagtgg gaatccagta accgaaaaac
    10321 cacaggaatc tatcgaaaaa aaccccaccc cccaaaaaaa ccgggcggat acctcaccat
    10381 cctcccaaac cctgatttat agcggatgaa caaaaatcag ggcaaggcgg cgaa
//
LOCUS       DAWEYF010000065        10284 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.065, whole genome shotgun sequence.
ACCESSION   DAWEYF010000065 DAWEYF010000000
VERSION     DAWEYF010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.065"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(92..1234)
                     /locus_tag="WGN93_001137"
     CDS             complement(92..1234)
                     /locus_tag="WGN93_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ0227046.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQVNPAFAPISGSDNDRRIVQTALDNARSA
                     EVDDIVSFSVADAQSVRPNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WRVGMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1283..1705)
                     /locus_tag="WGN93_001138"
     CDS             complement(1283..1705)
                     /locus_tag="WGN93_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227047.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1698..2507)
                     /locus_tag="WGN93_001139"
     CDS             complement(1698..2507)
                     /locus_tag="WGN93_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ0227048.1"
                     /translation="MTRDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGKPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMVVQTREQWRRAQEKGADAVVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2581..2958)
                     /locus_tag="WGN93_001140"
     CDS             complement(2581..2958)
                     /locus_tag="WGN93_001140"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ0227049.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYAPALSEWLEEQG
                     IRHVNLSMADEGDTVLAFAVAEK"
     gene            complement(3158..3925)
                     /locus_tag="WGN93_001141"
     CDS             complement(3158..3925)
                     /locus_tag="WGN93_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ0227050.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFNMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3935..4714)
                     /locus_tag="WGN93_001142"
     CDS             complement(3935..4714)
                     /locus_tag="WGN93_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ0227051.1"
                     /translation="MNQKYILSANNNSLIEEIHNTVQSIGYCIVRGLNLNHLDDSRRN
                     KKLFDFLSQLGMLTNHKDDGFKSIFLDIKYRGDDYVINNDITFSEDVGECPLHSDSSF
                     SENPESYLVMYVVKSANDGGNSLFLSSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPA
                     SFDKKQGVRWGNILSVNTQMIRFRSDCIYKGIEENRNKVSKEMVLALDYLVNVIKNAS
                     DIQEFSAQDDDLIIIDNVNGLHAGTDYTDKNRHYIRARITV"
     gene            complement(4713..4820)
                     /locus_tag="WGN93_001143"
                     /pseudo
     CDS             complement(4713..4820)
                     /locus_tag="WGN93_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4866..5594)
                     /gene="pdxJ"
                     /locus_tag="WGN93_001144"
     CDS             complement(4866..5594)
                     /gene="pdxJ"
                     /locus_tag="WGN93_001144"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ0227052.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(5647..6390)
                     /gene="recO"
                     /locus_tag="WGN93_001145"
     CDS             complement(5647..6390)
                     /gene="recO"
                     /locus_tag="WGN93_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ0227053.1"
                     /translation="MSEHRINHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLLIGTLLPEGLKSRQVLEQIRQFDRNTA"
     gene            complement(6424..7551)
                     /gene="pheA"
                     /locus_tag="WGN93_001146"
     CDS             complement(6424..7551)
                     /gene="pheA"
                     /locus_tag="WGN93_001146"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ0227054.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASSSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(7590..8822)
                     /locus_tag="WGN93_001147"
     CDS             complement(7590..8822)
                     /locus_tag="WGN93_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ0227055.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRITAWRL
                     KTGAHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(9342..10196)
                     /locus_tag="WGN93_001148"
     CDS             complement(9342..10196)
                     /locus_tag="WGN93_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ0227056.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         2472 a         2781 c         2660 g         2371 t
ORIGIN      
        1 atcctgattt ttgttaatcc actataatat cggccggata ttaaaaaaag ccgtctgaac
       61 atttttcaga cggcattttt gtacactttc ctcaacggtt cgatccctgc accatatcaa
      121 tcaggaacag gcggcaatcg aggttgccgt tataaagcgg aattttccgc ttgggcgaca
      181 ggcgcatgaa tttgggcatt tccctgtcgc cggtaaacat accgacccgc cagccggcat
      241 agtgtttttt caaccacgtc cccaactgcg gataaagtgc ctgcaaagcg cggacttcct
      301 caaggcgcac accgtagggc ggattggaca ccatgatgcc gttttcgccg ttcggacgga
      361 cggattgcgc gtcggcaacg ctgaaggaaa cgatgtcatc cacttcggca ctgcgtgcgt
      421 tgtccaatgc cgtctgaacg atgcggcggt cgttgtcgct gcccgaaatc ggtgcaaaag
      481 cggggttgac ctgcgcttcg gcgcggcggc gcaaatccgc ccacagcgtt ttatcgaaat
      541 tttgcagttt ttcaaaaccg aagcggcgca tcatacccgg tgcgcggccg gcggcaatcc
      601 aagcggcttc gatagcaatc gtgccgctgc cgcaaaacgg gtcttgaaac ggctgcgtgc
      661 cgtcgtagcc tgccgagagc agcaatccgg cggcaaggtt ttcgcgcagc ggggcttcgc
      721 cggtatcgag acggtagccg cgtttgaaca gggcttcgcc cgaagtgtcg atgaagattt
      781 cgacattgcg ttcgtccaaa aaggcgtgga tgcgaacatc gggcgcggct ttgtccacgc
      841 tcggacgtgc gtcgtaaatg tcgcggaaag cgtcgcagac ggcatctttg acggtcaaac
      901 caacaaattg gatgctctta acgttggcac gctttgcctc gactttgact ttgaacgtct
      961 gctgtaaagt aaaccaatta aaccagttga tatttttggc gagtttgtag atgtcgcgct
     1021 cattgcggta tgtccctttg gtcaggcgca gcaggatacg gctggcagta cgcgaatgca
     1081 ggttggcggc gtaaacctgt tccaatccgc cccggcagga aacgccgccg tcaaacactt
     1141 gtacatcggt acagccgagg ctttcgagtt cttgagataa aacggtctcc aagccgcgcg
     1201 ggcaggtggc gaaaagtgta tataaagtat tcataacgtg tcctttccgg acggatgttc
     1261 cggcaatggc ggattgaaag gtttattcgg cggtaaatgc cgtctgaaat gtccgactgc
     1321 cgattgtaat gtccgccgta aaatcgcgcc tgccttcgac acagatgggc aggcggatgc
     1381 gtactgcctg ccaagtcccc gacggttgcc gctcgaacat atagcggttg aaacccatat
     1441 ccatattttt catactgaag ctgatgctga cctgttccgt gccggcgggc gcgtgttcga
     1501 tataaatatc aaacggtttt ttggttgaaa cggcggcggc gcggacgcgg cttccgtccg
     1561 gcagcgtgca accctcggtc aaatcgcatt gcgccgccac agcttgcggc tgctgcgcct
     1621 gccaccattg caacaaaacg agcttgacgg cggcaaaggc aatcagcagc agtgcggcaa
     1681 gcagtaattt acggttttta ttcatgattc ttccctattg tttcatccct taccaccacg
     1741 tgcgccccca atccgagcca tagttttcca taacgtgcaa ccgtctgtcc gtttgctgca
     1801 agtacgagcg gcacggatac gccctgccgc agggcttctg ccgcctcttg tgcctgaaca
     1861 tcatcgcaca cgcgccaaac gaccgcatcc gcgccctttt cctgcgcccg ccgccattgt
     1921 tcgcgggtct gcaccaccat ccacacgctg tcggcgtgtt cgggtctgtc ctgccattgc
     1981 gccgcctcca tcaaaacgtt cgcaccgctt ccctctgccg aacccaaagg caggacgcgg
     2041 tacgcgccca tactgttttc tccgtgcaaa cccgttttca ggctgccgta caaacggcgc
     2101 gggacggaca gcgaacgcaa aagcgcgccg ttggcgggca gcatgggggc aacggtaaaa
     2161 tcacccgcct tctgccaaga ccattcctgc ccttcgcggg attgcggttt gcccgtccat
     2221 tggtcggggt tgacccatag gaatttcagg cagacgcggg cgtgttcgta ggaatggatt
     2281 ttggtcagcc aaggcgtggc ggcgaggatg cggatgccga gttcttcttc aaactcgcgt
     2341 tgcaaggctt ggaagtcggt ttcgcccgct tcgaccttgc cgccggcaaa ttcccaatat
     2401 ccggcatagg gtttgccttc ggggcgcgag ctgagcaggt agttgccgtc tgaatcgagc
     2461 aggatgccgg caacgacgcg gataaggggt cgggtgtctc gggtcatagg aaagatggga
     2521 aaagtttttc cgaacattag aaaagggcgg aacggtcaat ccggcccggc ggctgccgcc
     2581 ttatttttcg gcaacggcaa acgccaatac cgtatcgcct tcatccgcca tactcaaatt
     2641 aacgtggcgt atgccttgtt cctccagcca ttcggacagg gcgggggcgt agaaaaattc
     2701 cggtttgccc aacgcgtcgt gcccgatgcc gatgttgcgg aaggaaaccg caccgcgtat
     2761 gcccgtgccg acggctttgg cgaaggcttc tttggcggca aagcgtttgg caaggtagtt
     2821 gacgggtttg cccgcttgcg gaaattcaag cagctcttcc ggagtgagga tgcgcccggc
     2881 aaacgcctgt ccgaattttt tgtttaagcg gatgatgcgc ttgagggaaa caatgtctgt
     2941 gccgatgccg taaatcatat ttgcgctcct tcgcccttgg ttgcgggtag tgatgaatgt
     3001 gatgatgaat gccgtcaatt tcttggggcg ttaaaatggc gtgaatatcc acttttgggg
     3061 ttttgtcggt aacaattttc actgtaacct tttgcatttg aaattctaaa acatcgtgcc
     3121 aattatttaa taaggagtta aggcatttaa taatgaatta aagtttgatt aaacccgaat
     3181 gcccgatttt cagagccaat accaataaaa caataaaaat taacatttta aaaaaatttg
     3241 ggctaatctt agtccttaac cgaattccaa catacaatcc aataacagac aatacggaca
     3301 gtaaaaatat taaaccgtat tcactcttat ttaataacca atactggtct cttagcatat
     3361 atatttgaac aattttcgcc aaaagatagc atagattgct tgattttacg atacgatttt
     3421 tattttctgt ttcgctaagc aaaaatatta acaatatggg agacatggca ttggttgaac
     3481 cgccgatgat gcctgccaaa aacccaaaaa gaaccatatt cttattattg gcaactactt
     3541 gaatattttt tgcttttgca catacattta aaataccatt gacagaataa tacaatgtaa
     3601 tgattgccat cagtaaaagc agccaagaca ctggaagtat caaaagcaac ttcaccccca
     3661 aaatgctgcc aacgacgctg ccgatagcaa gcaatttata ggtttttaaa taataaacaa
     3721 tctcttgcca aaaacccttt ttgttattgc tgcatagaac caacaagctc attaacaggc
     3781 ttggtaatgc caccaaggca acaaccttag acaatggcat gttaaaagcc aatgcggttg
     3841 taccgagcat cggaaatccc atgcctgtaa ttccgtgcag tattgcggca gcaacaaaaa
     3901 cgatagattg cattatttct tgcataaccg tcctttatac agtaattctt gctctaatat
     3961 aatgcctgtt tttatccgta taatcagttc cggcatgcaa accattgaca ttgtcaataa
     4021 taatcaaatc atcatcttgt gcagaaaatt cttgaatatc actcgcattt tttataacat
     4081 ttacaagata atcaagtgca agtaccattt cctttgatac tttatttcta ttttcttcaa
     4141 tacctttata gatacaatca cttctaaatc taatcatttg agtattgacc gataagatat
     4201 taccccatct cacaccttgt tttttatcaa atgatgctgg tgttttaaat ggatataaat
     4261 tgcccgttaa tgtttttaag tgttttttac cggtttctgt tttagataac tgattgacaa
     4321 tatctgatga acttaaaaat agggaattac ctccatcatt ggctgatttt actacataca
     4381 taaccaaata actttccggg ttttcactaa aagatgaatc actatgaagt ggacattctc
     4441 caacatcttc cgagaaagtt atatcattat ttattacata gtcatcgccg cgatatttaa
     4501 tatccaaaaa tatagattta aaaccatcgt ctttgtggtt tgtcagcatt cctaattgag
     4561 atagaaagtc aaataatttc ttgtttctcc ggctgtcatc aagatggttt agattaagac
     4621 cgcgaacaat acaataccca atactctgta ctgtattgtg aatttcttct atcaaactat
     4681 tattgtttgc agataaaata tacttttgat tcatatagtg aattaaattt aaaccagtac
     4741 ggcgttggct tgccttgccg tactatttgt actgtctgcg gcttcgccgc cttgtcctga
     4801 tttaaattta atccactata acatatccct gtcgtgaaat gctgtctgaa agggtttgcc
     4861 tgcccttacg gcagcagcct tgccctgaac atcgcctcct tcatctggcg cacggcttcg
     4921 ggcagtccga ggaagagggc ttgggcaatc agcgaatgcc cgatgttcag ttcgcggatg
     4981 gcgaggattt gggcgatggg ggtaacgttg tgtatggtca gtccgtgtcc ggcgttgacg
     5041 accaagccca aatcgccggc aaaatgcgcg ccgttttgca gacgctcgaa ttgcttgagt
     5101 tgttcggcgt gactgcgtgc atcggcatat gcgccggtgt gcagctcgac aacgggcgcg
     5161 ccgacatcat aggcggcttg gatttgcctg tcgtcggcat cgataaacaa agacacgcgt
     5221 atgcccgcgt cggtcaggat tttggtgaat tcggcgattt tttcctgttg cgccaatacg
     5281 tccaaaccgc cttcggtcgt gatttcctgc cgtttttcag gcacgatgca cacgtcttcc
     5341 ggcatcactt taagcgcgtt ttcgagcatt tcttccgtca acgccatttc aaggttcagg
     5401 cgcgtgcgga tggcgttttt gacggcaaac acgtccgcgt ctttgatgtg gcggcggtct
     5461 tcgcgcaggt gcatggtaat caggtcggca ccgtgcgttt cggcaaccag tgccgcctcc
     5521 acggggctgg gataagtcgt gccgcgcgcg ttgcggacgg tggcgatgtg gtcgatgttg
     5581 acacccaaaa gcataatgtt tccttttctc ttcgtttttc tgtttggcgg catggtgtgg
     5641 gcgcagctac gcggtattgc ggtcaaactg ccttatctgt tccaacacct gccgcgattt
     5701 caagccttcg ggaagcagcg tgccgatcag cagccgtgtg attttcaatg cctgttgcag
     5761 gctttcggcg gtgcggaaac tgccttcgcg caaatcgatc aggctttgcc cttcgacaat
     5821 tgcgccggcc tcgtgcgaaa gcgcgtctgc gtcctcgcat acgggcatga ccgcctcttc
     5881 gggcatcagc cggtaggttt tgtccgccaa aatatcgccg cccgtgccgt cggcgtgcaa
     5941 atcgggggca acgcccaagg cattgagcag cttccactcg aagcggcgca aatcggcaat
     6001 gtggttggct tcacgacaca ccgcctccat cacttttgcc aacgcgtcgt acagttcggg
     6061 catcggatct tcgcgcgcgg tcagtttcaa caccagttcg ttcacataca gaccgctgaa
     6121 caacgccctg ccctgcggct gccgccatcc gccgacccat tcggcacggt gaagggtttt
     6181 gagttcctga ctgccgtacc acgacgcact gacgggcacg aaaggaacca atacgccgcg
     6241 caattcgctc tgccgcttgc gcgcgcttct tgccaaaagt gccacacgcc cgtaacggcg
     6301 gctgaaggct tcgacccgca ggctgctttc gcgccagggc gatgatgcca acaggaagac
     6361 gggttcgtgg ttgatgcggt gttcggacat catgcctgaa atgccgtctg aacgctgccg
     6421 ccgctacaaa acggcggtcg ggtacgaacc gatgactttg acgaacgaag cgcgttcgcc
     6481 caagcgttcc aatgccgtct gaatctgcgc gtcccggcgg tgtccttcga tgtcgatgaa
     6541 gaacaggtat tcccacaaaa cggatttgct cggacggctc tcaaacttgg tcatggaaat
     6601 acccgactcg gtcagcggtt gcagcagcga ggcaaccgca ccggcgcggt tgggcgcgga
     6661 aacggccagc gaagtcttgt cgctgctgct tgcaccggtt tcgtgatgtc ccatcaccaa
     6721 gaagcgcgtg gtgttgttcg gttcgtcttc gatgcactcg gcaaccatat cgagtccgta
     6781 gatttccgcc gccgtgcgtc cggcgatggc ggcaaccgta ccgtcgtccg attcggcaac
     6841 cagccttgcg gcttcggcat tgctggacac ggcaatccgt tcggcgttgg gcaggtgtct
     6901 gcccaaccag tcgttgcact gcgccaacgc ctgcgcgtgg gaaaagactt tggcaatgcc
     6961 ttcggtgctg ccgttgtttt tacgcaaaag gttgtggtgg atgcgcaaaa cgacttcgcc
     7021 gcacgcctgc aacgcggtaa cggcaagcaa atccaacgtg cgcccgaccg agccttcggt
     7081 cgagttttcc acgggggcga ccagatagtc tgcctgacgg gtttcaacct gcttgaagca
     7141 gttgtctatg gtcggacacg ccatggtgtg cgcggcgtgt ccgaaatgct taatcgccgc
     7201 ctgctgggta aacgtgccct gcggccccag ataggcgatg gtcagcgggc gttcgacggc
     7261 gaggcactcg ctcatcactt cccgaaacag gcgtgctacc gattcgtcgg gcagcgggcc
     7321 tttgttcaaa tcctgaatgc ggcgcaacac ggcgacttcg cgttcggggc ggtacactgc
     7381 gcccgtgcct ttcagctcgc cgatggcgtg ggcgtgttgc gcacgttcgt tgagcaggcg
     7441 caggatttcg gcatcgatgg tgtcgatggc gttgcggtgg ggaaggagga gttcgtcgat
     7501 agtttgggac ataatttcgc ctgaacagta atttatcgtg cattctaaca tcaaatgccg
     7561 tctgaaacgg tttcagacgg cattttccgt taaaggtatt cgctctgttc gttttccttc
     7621 cacgcccggt gcgaacacag ccacagaagc gcaatgccgc aagaggtgga cgcggtcatc
     7681 gttgccgcca tcacggttgc cgaaccgtcg tgcaagaagg tcgccgccat acccaccccc
     7741 gcgccgatta aggactggaa cacgcccaac acggcgttcg cgctgccgcc ctcttctttg
     7801 aaataagaca taaagcatgc ctgcgtgttc gcgccgacca agccctgcgt gccgacggaa
     7861 aacatcacgc acgcaaccaa gagccagaac ggaggcaacc cgaaaaacag cacggcggcg
     7921 agttgggaca ggttggcggc aaattggacg acaatccccc acagcaggat gctttgcgga
     7981 tgcgcgccgg ttttgagccg ccacgcggta atgcggttga aaaacatcat cgtgatgatg
     8041 ttgagtgcaa acgcccaagc gtattgatga ggcgtaacac ggtaaagctg ctggtacacg
     8101 aaggaagatt cggtcagaaa ggcgaacatc gaaccgaagc tgaatgcctg aaaaaacaga
     8161 taacccatcg cggcacgggt tttcaatacg cgtttgaacc gcccagccac cagcccgaac
     8221 acatcccgtc cgattttgcc gccgacggca ggcttgggca ggaaatactg caccaaaccg
     8281 agcagcacca gcgaatacgc cgccagaaaa acaaaaatcg cctgccagcc acccaagccc
     8341 tgcaacagtg cgccgaccat gggtgcgacc agcggcacaa ccatcaaaat gatgccgata
     8401 agggcaaaca tctgggcggc tttgcgtccg gaataataat cgcgcaccat tgcgccgacg
     8461 atgaccacag tcatgcccgc accgaatgcc tgcacgacgc gcaggttgag gagctgttcg
     8521 gcactcgaag caaatacgat ggcggcaacg gcaaggcagt agacggccag tccggtcagc
     8581 gcgacgggtt tgcgcccttt gatgtcggac accgaaccgc cgaccacctg tccgaacgcc
     8641 gtgccgaaca taaacaaact caggctctgt tcgatgcggt ggacatccgc gttcagcgac
     8701 tgcgccattt cgggaatcgc gggcaggtag gcatcgatgg aaaacggcat cagcgtaacc
     8761 agcatcgcca tcaaaaccgc catcagtttt tcgctcattt caggataatg ggcagaaggc
     8821 ataaattctc gtccgattcg caaacaaacc gcccggcggc ggaaaacaca atacgcggaa
     8881 acggaaaatt ttaacacacc ggcacaaaca ggcggcaaca aaagccccgg caaaaccgga
     8941 cgaaccggaa cgatatagtg gattaacaaa aaccagtaca gcgttgcctt gccttagctc
     9001 aaagagaacg attctctaag gtgcttaagc acccagtgaa tcggttccgt actatctgta
     9061 ctgtctgcgg cttcgtcgtc ttgtcctgat ttttgttaat ccgctataaa atcccgtcat
     9121 tcctgcgcag gcgggaatcc ggacatccaa cgctgcagca atttgtcgga aataaccgaa
     9181 actcaaaaaa ccggatgccc gcctgcgcgg gaatgacgat gcaaagatgg tcgttatttc
     9241 ggataaatat ccgtcttttc gttccggata cccgctttcg caggaatgga gatggaaaga
     9301 tttcagccta ttcggcaatc atcaaatacc gcttcccaac tttatttttg atgcgacagc
     9361 cggccggcaa ccaaggtggc ggcgatgacg acaaacacgc ccaaggcgga cacgggcgac
     9421 aggtgttcgc ccaaaatcaa aaccgccagc agcacgccga cgacgggttc gagcgaaatc
     9481 aacagtcccg aaacgttggc aggaacacgg ctcatcccct tgttccacag ccaataggcg
     9541 taccagccgc accccaaacc caaatacagc agcgacaata ccatcccgac gctccagtcc
     9601 acggtataac tttgcgccaa agcaagcgaa aacggcaggc acatcaacga tgcggcggca
     9661 atggaaacag atgtgaatgc cggtgcgccg atgcgtgcaa tcagcctttg cgtcggacgc
     9721 atagcggcac aaaagcccgc gcccgccaac aacaccagca ggcagccgaa ccagccgact
     9781 tcgccgccct cttccgcacc gcccgccatc agcagcgcga caccggcaaa tgccgccgcg
     9841 ccgcatatcc agtggtaggc acgcgctttg tcgttgaaga aaaagtgtcc gacaaacacc
     9901 atcagcagtg gctcgagtcc gacaatgacc gatgcgctgg cggcggaagt gtatttcaac
     9961 ccgacaaact gaagcagcag ggtcagcaca tagttgacga acgacacaat cagcaacggc
    10021 ttccattcct cacgcggaat cttgccgaca tgacggcggc aggcgggcag tgcaggcagc
    10081 gcagcaatca gcaggcgcac gccgaccatc aatgcgggat cgatgccgcc atagacatat
    10141 ttggcggcaa taaacgagct gctccagata atcagggcaa ggatttggta aaacatagtg
    10201 agtgataaag tcagatggtc atacaaaagt atagcggatt aacaaaaatc aggacaaggc
    10261 gacgaagctg cagacagtac aaat
//
LOCUS       DAWEYF010000066        10053 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.066, whole genome shotgun sequence.
ACCESSION   DAWEYF010000066 DAWEYF010000000
VERSION     DAWEYF010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10053
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.066"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            13..687
                     /locus_tag="WGN93_001149"
     CDS             13..687
                     /locus_tag="WGN93_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ0227057.1"
                     /translation="MQADLAYAAERITHDYPQATGANNTSTVSDYFRNIRAHSIHPRV
                     SVGYDFGDWRIAADYASYRKWKESNFSTKKVTKEINDNYQETKTEHQGNGSFHASSSL
                     GLSAIYDFKLNDKFKPYIGARVAYGHVKHQVHSVETKTTTVTPKPKNGSPQGGAVPSR
                     EPSKPPYHESHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSL
                     GVRYRF"
     gene            complement(661..870)
                     /locus_tag="WGN93_001150"
     CDS             complement(661..870)
                     /locus_tag="WGN93_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227058.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGLMPSEGSDGIGIGESEAVAHAQ"
     gene            complement(888..1445)
                     /locus_tag="WGN93_001151"
     CDS             complement(888..1445)
                     /locus_tag="WGN93_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ0227059.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(1521..3155)
                     /locus_tag="WGN93_001152"
     CDS             complement(1521..3155)
                     /locus_tag="WGN93_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ0227060.1"
                     /translation="MIKPNLRPKLGSSVLIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGDIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(3560..4666)
                     /gene="serC"
                     /locus_tag="WGN93_001153"
     CDS             complement(3560..4666)
                     /gene="serC"
                     /locus_tag="WGN93_001153"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ0227061.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHINRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            5031..5462
                     /gene="rimP"
                     /locus_tag="WGN93_001154"
     CDS             5031..5462
                     /gene="rimP"
                     /locus_tag="WGN93_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ0227062.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            5491..6993
                     /gene="nusA"
                     /locus_tag="WGN93_001155"
     CDS             5491..6993
                     /gene="nusA"
                     /locus_tag="WGN93_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ0227063.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTAIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            7006..9894
                     /gene="infB"
                     /locus_tag="WGN93_001156"
     CDS             7006..9894
                     /gene="infB"
                     /locus_tag="WGN93_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ0227064.1"
                     /translation="MNNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAATRAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAGKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKAAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRVGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKT
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPI
                     VVAVNKIDKEAANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLE
                     AEVLELAAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQLTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGE
                     LSSLKRYKDDVKEVRMGFECGLMIKGFNEIMEGDQLECFDIVEVARTL"
BASE COUNT         2693 a         2899 c         2538 g         1923 t
ORIGIN      
        1 agcccgtatt atgtgcaggc ggatttagcc tacgccgccg aacgcattac ccacgattat
       61 ccgcaagcaa ccggtgcaaa caacacaagc acagtaagcg attatttcag aaacatccgt
      121 gcgcattcca tccacccccg ggtgtcggtc ggctacgact tcggcgactg gaggatagcg
      181 gcagattatg ccagttacag aaaatggaaa gaaagtaatt tttctactaa aaaagttact
      241 aaagagataa acgacaacta ccaagaaacc aaaacagaac atcaaggaaa cggcagcttc
      301 cacgcctctt cttctctcgg cttatccgcc atttacgatt tcaaactcaa cgataaattc
      361 aaaccctata tcggtgcgcg cgtcgcctac ggacacgtta aacatcaggt tcattcggtg
      421 gaaacaaaaa ccacgactgt tacccctaaa ccaaagaacg gctctccaca gggaggagct
      481 gtcccatcaa gagagcccag caaacctccc tatcacgaaa gccacagcat cagcagcttg
      541 ggtcttggtg tcatcgccgg tgtcggtttc gacatcacgc ccaagctgac cttggacacc
      601 ggataccgct accacaactg gggacgcttg gaaaacaccc gcttcaaaac ccacgaagtc
      661 tcattgggcg tgcgctaccg cttctgattc cccgataccg atgccgtctg aaccttcaga
      721 cggcatgaga cctttgcctg cgcacttggt gcgctggtcg cctccgaaca tggcgcgaca
      781 cccgacattt ccgccgaacg catcgggcgt ttcatgaatc cggtttaaaa cgcatggaaa
      841 aatgccgtct gaaagccttt cagacggcat tgtgcttgag attccgttta ccaatgactg
      901 acaaacgctt ccaaatcggt attcttgggc ttatgcactt cctctgtcgg cgtgccgacc
      961 atcatcagcc cgatgatttt atccttatcc gcacatccga aagcctcacg caacaggggg
     1021 ctgttgaccc acatccccgt aatccagaca ttgtcgaaac cttgcgccgt tgccgccagt
     1081 tgcagcgcat acgccgcaca acccgccgtc agcatctgct cccattccgg tttcggctta
     1141 ggcacatcgc ggttcggcgc aaacgttacc ccgataacca tcggcgccat attgcccact
     1201 ttttccgcct ttttcatcgc atcgtcgccg aaattcaatt cggcaaccgt ttgcttcaac
     1261 acatcgcgaa aacgttgcaa tcctacctcg ccttgaatca cggtaaaacg gaaggggcgc
     1321 atattgccgt gatcgggaac ttgggttgcc gcctgaaata tttgttccaa ctccgccgca
     1381 tcgggggcgg ggtgcttcag ctttttggaa gatcggcggt tcgtcaataa ttttaaagca
     1441 tccatatcgt tatactccgg tcatcggtcg ggtgttcgga cacatatgcc gtccgaaggc
     1501 ttcagacggc atatccggca tcagcgcgga cggcggcagg ctgccaatat atccatttcc
     1561 ttccgatagg tttggctgtt ggaaatgtcc atcagcccca ataccgtgct gaaatagtgg
     1621 tcgtgcgaat attcgttttc cgccgctttt tgtttgaggc attggaaatc tatgtccccg
     1681 tgttggcgga aggctttgga aaaccacata accatcggga tatgcgtctg cccagaaggc
     1741 gcgatggcgt aaggcgcggc gtgcaggtac atcccgtttt cgcccaaact ttcgccgtgg
     1801 tcggaaacat aatgcaccac gctttccaaa tcgtcgcggt tttcaagttt gcggataacc
     1861 ttgtcgataa actggtccac atacaaaacc gtattgtcgt aagtgttgac cagcgtggcg
     1921 cgggtgcatt tgttgatttc gttggtgtcg caggtcggcg tgaatttgcg ttcggcttcg
     1981 gtatagcgtt cgtaatacgt cggcccgtgg ctgccgatgg tatgcaggat taaaaccgcg
     2041 tctttatcgt ttttgttgag gacttcgtcg aacttagtca gcaggatatt gtcgagacac
     2101 tcgccgttgc ggcagtattc gggcaggttg agcgaggtaa cgtcggtatt cggcactttg
     2161 ccgcacacgc ccttgcagcc ggaatcgttt tccaaccagg taacttccac gccggcgcgc
     2221 tgcacgatgt ccagcaggtt gtcttggtgt tcggctttga tttcgtcata atccgtgcgg
     2281 tcgaaggttg agaacataca cggcagggag tgcgcggtcg atgtgccgca gcttctgacc
     2341 tgcgggaaat tgacaatttc atcgccgcgc gcggcaagca gcggcgtagt ttggcggctg
     2401 taaccgttca aaccccagtt ggcggcacgc gtggtctcgc ccacgaccaa aaccacgaaa
     2461 cggcgcaggc tgccggccgg ccggttttgc acgaccgcca tatccaattg cgtataagga
     2521 atattggaac gcttccaatc tttgtatttc gacacgcccg cgccgatgaa attagacggc
     2581 acaatcagat gggttactga tttattgttg cggaaaaacg aggcgtaatc ctgatattgc
     2641 aacattgcga tgcccaacgc gcacaaaaag gaaacggcgg caagcacaag gcgcgtcaaa
     2701 agctccttat accaaacgcg gtatttaacc ttgacggcga tatacgccag cgcgggcaat
     2761 acgcccaaac atacaatcca cagcacatag cccggcgtaa tcaggcgcgc gctttcggca
     2821 gccgtagttt gcaagacatt attcaacatc gacttgttga aatagatatt gaaaaatatt
     2881 tcttggtaag acaccgccgc actgataacc aatatcaatg gaatcaatac cttatgcacg
     2941 aaaggcaggg caatgacgtg aaaaacgaaa ttacttaaaa aaaacagcac caccggcatc
     3001 gtatagagga agatatccgc cccggtgccg ttaaaaggat gaagctcgac aactttggca
     3061 aaaaaggcgt aattcaatac cagcgaggaa tacagggaaa ggaaggcaat cagcacggaa
     3121 gagccgagct tcggcctcag gttcggtttt atcatttgga atgtgtcgga taagggttgg
     3181 aaaaggcatc cggcatttgg aatccggatt attgaaaaag attcttaatt ataaggcaac
     3241 ggagcaaagc agggcaagaa aacggcggcg gcgcgaggtt tccgcccgcc attcaaacgt
     3301 ccggcagaca taaaaacatc gtaagcaaga ttcgaaccgg tctgcaaccg cccctgccag
     3361 aaaaacgggc aaagcatttc atattggaaa aacccggccg cgccgccgac gggacagtcc
     3421 ggcacaaaca gcatcacgcc cggattgaaa aggacggata gccgccggca gcacagtttt
     3481 accccgcatc ccaaaacgcc gccggagaac gccgaaacag ccgatgccgt ctgaagccgc
     3541 ttcagacaac atcgggacat caaccgtaac gccgttggaa atcgcgcata aaatctgcca
     3601 aagcccgcac gccttcgagc ggcatcgcat tgtagatgct ggcgcgcatc ccgccgacag
     3661 acttatagcc cttcaacagg cacaagccct gcaattcggc ttccagcaca aaacggcggt
     3721 caagctcctc atcccccgtt tggaacacga cattcatttt agaacgcgca ttcggacgga
     3781 tacggttgat ataaaaaccg ccactgccgt ctatcgtctc atacaaggtt tgcgccttca
     3841 gccgattgac cgcttcaatt tttttcacac cgccctgcgc ctgcagccag cggaacacca
     3901 gccccgacat ataaatcgcg taagttgacg gcgtgttgta cataccgtcg cggttgatgt
     3961 gcgaacggta gttgaacaca tcgggaatat cgttcggaca acgctcgagc aaatcctcac
     4021 gcacaatcac caccgtaact cctgccggcc cgatgttttt ctgtgcgcct gcgtaaatca
     4081 gtccgtagtc ggcaacatca aactcgcgcg acaaaatctc gctggacata tcgcacacca
     4141 gcggcggcat gccttctgaa aggcgcggca cttcacggta ttgcagcccg ttgaccgttt
     4201 cattgacggc aaaatggaca aacgccgaat cgggtgcaac atcccacgtt tccacaggcg
     4261 gcaggtcgag atagtcgaac tgctcgccgc catgcgccgc caaacggatt tccgtatcgg
     4321 tcaaacggct catctgttca taagcgatac ggctccagtt gcccgttacc accgcgtcgg
     4381 cagtgcggaa accgtgtgcc agattcatgg ctgccatatt aaattgggtt gttgctccgc
     4441 cctgcagaaa caatatctta tagttgtcag gcactttcaa aagctgcctc aaatcctgtt
     4501 ccgcatgatg caggatgctc aaaaacattt ccgaacggtg gctcatcgcc atcacaggaa
     4561 aacccgtacc gttgtagtcc aacatttcct gccgcgccgt ttccaacacg gcttcgggca
     4621 atacggcagg gccggcggaa aaattgtaaa tcggataaag agacatgatg cagccctgat
     4681 tctgaacaat aacccgcctg attttaggct tgcagcaggc tttgtgcaag gatgggaaat
     4741 acctgtcctc cgcccggctt catgccgccc gaacacggaa aataatatca atatattgat
     4801 ttacaaacat aaaaatcatg tacgcgacaa atagatacat ttgttttgtc aacaatattc
     4861 acgatttccc attacaaacc tcccttacac ccgctttttt ccgtcccaaa aacacaaaat
     4921 aaatcaacac tttcatttct ccgcaaaagc ggttataatc acgccgattt ttcaactttg
     4981 acgaaaaatg gccacggggc cattttttta ttatgtacat agggagcagc atggatatcc
     5041 aaaccatcct cgaaaaaacc ctgcccggcc tgggctacga actggtcgat tttgaactga
     5101 ccgcgcaagg aacattgcgc gtgttcatcg acaaagaagg cggcattacc gtcgaagact
     5161 gcgcaaccgt cagcaaccac ttgagccgcg tcttcatggt tgaagacatc gactacaaaa
     5221 acctggaaat ttccagcccc ggactcgacc gccccttgaa aaaagccgcc gacttcgtgc
     5281 gctttgccgg tcagaatgcc aaaatcaaaa cccgcctgcc gatagacggt cagaaaaact
     5341 ttatcggtaa aatcgaaggc tgcgaaaacg ataccgttac cgtatccttc gacggcaaaa
     5401 ccgtacaaat cgaattgggc aacatcgaca aagcccgtct gcgccccgaa ttcaaattct
     5461 aaaacacaac aataattgga gatgttcaaa atgagtcgtg aaatgttaca gctggcagaa
     5521 gcactggcaa gcgaaaaaaa cgttgatgcc gaagtcgtct tccaagcact ggaattcgcc
     5581 ctgtctaccg ccgccaagaa aaaggcagac cgcgaacaca tggacgtgcg cgtccaaatc
     5641 aaccgcgata ccggcgaata ccaaaccttc cgccgctggc tgattgtcgc cgatgaagac
     5701 tatacctatc ccgatgtcga aaaaaccatc gaggaaatcc aagaggaaat tcccggcacc
     5761 gccatccaaa tcggcgaata ctatgaagag cagctgccta acgaaggctt cggccgccaa
     5821 gccgcacaaa ccgccaaaca aatcatcctg caacgcatcc gcgatgcgga gcgcgagcaa
     5881 aatctgaacg agtttctcgc cgtcaaagaa gacatcgtgt ccggtacggt caaacgcgtc
     5941 gaacgccacg gcatcatcgt cgaagtcgtt gccggcaaac tggacgcgct gattccgcgc
     6001 gaccaaatga ttccgcgcga aaacttccgc agcggcgacc gcatccgcgc cctcttcctg
     6061 cgcgtcgaag aaatcggcaa caccggccgc aaacaagtca tcctgagccg tacttccggc
     6121 gatttcctcg tcaaactgta cgccaatgaa gtacctgaaa ttgcagacgg catgcttgaa
     6181 atccgcgctg tcgcccgcga cccgggccag cgtgccaaag tcgccgtcaa agccaacgac
     6241 cagcgcatcg atccgcaagg cacctgtatc ggcgttcgcg gttcgcgtgt caatgccgtc
     6301 agcaacgaat tgtccggcga gcgcatcgac gttgtccttt ggtcgcccga gcctgcccaa
     6361 ttcgtcatga gcgcgctctc acccgccgaa gtcagccgca tcgtcatcga cgaagacaaa
     6421 cacgccgtcg atgtcatcgt tgccgaagac cagctcgcgc tcgccatcgg gcgcggcggt
     6481 caaaacgtgc gccttgcttc cgacctgact ggctggcagc tcaacatcat gacttccgcc
     6541 gaggcagacg aacgcaatgc ggcagaagat gccgccatcc gccgcctgtt tatggatcac
     6601 ttgaacgtgg acgaagaaac cgccgacgta ctggttcagg aaggttttgc aaccttggaa
     6661 gaagtcgcct atgttcctgc cgccgaactg cttgccattg aaggatttga cgaagaaatc
     6721 gtcgatatgc tccgcaaccg cgcccgcgat gccatcctga ccatggcgat tgccgccgaa
     6781 gaaaaactgg gcgaagtgtc cgacgatatg cgcaacctcg aaggcataga tgccgatatg
     6841 ctccgcagcc ttgccgaagc aggcattact acccgcgacg acttggcaga gcttgctgtg
     6901 gacgaactga ttgaaatcac cggtgtaaac gaagaaaccg caaaagccgt catcctgacc
     6961 gcacgcgaac actggtttac cgaagacaaa taaaaggggg tacagatgaa taacacaacc
     7021 gtagaacaat ttgccgccga actgaaacgc cccgtcgaag acctgttgaa acagttgaaa
     7081 gaagccggcg tcagcaaaaa cagcggcagc gattccctga cgctggacga caaacagctt
     7141 ctgaacgcct acctgaccaa gaaaaacggc agcaacggcg gcaccatcag catccgccgc
     7201 accaaaaccg aagtcagcac cgttgacggc gtaaaagtcg aaacacgcaa acgcggacgc
     7261 actgtcaaca ttccttctgc cgaagaattg gcagcacagg taaaagccgc ccaaacccaa
     7321 gccgcacctg tccggccgga gcagacggca gaagacgcgg caaaagcccg agccgaagct
     7381 gccacacgtg cagaagcccg tgccaaggca gaagcggaag cggcaaaact gaaagcggca
     7441 aaagcaggca acaaagccaa acctgccgcg cagaaaccca ccgaagcaaa agccgaaacc
     7501 gcacccgttg cggcggaaac caaacccgcc gaagaaagca aagcgggaaa agcccaagcc
     7561 gacaaaatgc cgtctaaaaa acccgccgag cccaaagaaa aagccgccaa gccgaaacac
     7621 gagcgaaacg gcaaaggcaa agatgccaaa aaaccggcga aacctgccgc acctgccgtg
     7681 ccgcaacccg tggtcagcgc ggaagaacag gcgcaacgcg atgaagaagc acgccgtgcc
     7741 gccgcacttc gcgcccacca ggaagccctg ttgaaagaga aacaggaacg ccaggcacgc
     7801 cgcgaagcca tgaaacaaca ggcagaacaa caggcaaaag ccgcacagga agccaaaacc
     7861 ggcagacagc gtcccgccaa acctgccgag aaaccgcagg cagccgcgcc ggccgtcgaa
     7921 aacaaacctg tcaatccggc aaaagcgaaa aaagaagacc gccgcaaccg cgatgacgaa
     7981 ggtcaaggcc gcaacgccaa aggcaaaggc ggcaaaggtg gtcgcgaccg caacaatgcg
     8041 cgcaatggcg acgacgagcg cgtacgcgtc ggcaaaaaag gcaaaaaact caaactcgag
     8101 ccgaaccaac acgccttcca agcgccgacc gaacctgtcg tacacgaggt tttggttccc
     8161 gaaaccatta ccgttgccga tttggcacac aaaatggcgg tcaaaggcgt ggaagtggtc
     8221 aaagccctga tgaagatggg catgatggta accatcaacc aatccatcga ccaagacacc
     8281 gccctgattg tggtggaaga actcggacat atcggcaaac ctgccgcagc ggacgatccg
     8341 gaagcattct tggacgaggg cgcggaagcg gtggaagccg aagcattgcc gcgtccgccg
     8401 gtggttaccg tgatggggca cgtcgaccac ggtaaaacct cgctgctgga ctacatccgc
     8461 cgcgccaaag tggtgcaggg cgaagcaggc ggcattacgc agcacatcgg cgcgtaccac
     8521 gtcaaaacgc cgcgcggcgt gattaccttc ttggataccc cgggccacga agcgtttacc
     8581 gccatgcgcg cacgcggcgc gaaagcgacc gacatcgtga ttctcgtggt tgccgcagac
     8641 gacggcgtga tgccgcaaac catcgaagcg attgcccacg ccaaagcggc aggcgtaccg
     8701 attgtggttg ccgtcaataa aatcgacaaa gaagccgcca accccgaacg catccgtcag
     8761 gaactgaccc aacacgaagt catccccgac gattggggcg gcacggttca attcatcgat
     8821 gtttccgcca aaaaagggac aaacatcgac gcgctgctcg aagccgtctt gctcgaagcc
     8881 gaagttttag aactggccgc cccggtcgat gcgcccgcca aaggcatcat cgtcgaggct
     8941 cgtttggaca aagggcgcgg cgcggttgcc acattgctgg ttcaaagcgg tacgctgaaa
     9001 aaaggcgaca tgctgctggc cggtacggca ttcggcaaaa tccgcgcgat ggtcgatgaa
     9061 aacggcaaat ccattaccga agccggcccg tccatcccgg tcgaaatcct cggcttgtcc
     9121 gacgtaccca atgcgggcga agacgcgatg gtattggcgg acgagaaaaa agcgcgcgaa
     9181 atcgccctct tccgccaagg caaataccgc gacgtgcgcc ttgccaaaca gcaggcggcg
     9241 aagctggaaa atatgttcaa caatatgggc gaaacccagg cccaatcttt gtcggtcatc
     9301 atcaaggcag acgttcaggg ctcttacgag gctttggcgg gcagcctgaa aaaactgtcc
     9361 accgacgagg tgaaagtgaa cgtgttgcac agcggcgtgg gcggcattac cgaatcggat
     9421 gtcaaccttg ccatcgcttc gggcgcgttc attatcggct ttaacgtgcg tgcagatgcc
     9481 tcttcgcgca aacttgccga aaatgaaaac gtggaaatcc gctactacaa catcatctac
     9541 gatgccatcg acgacgtgaa agcggcgatg agcggtatgc tttctcccga agagaaagaa
     9601 cagcttaccg gcacggtcga aatccgtcag gtcatcagcg tttccaaagt cggcaacatt
     9661 gcaggctgta tggttaccga cggcgtggtc aaacgcgatt cccatatccg cctcatccgc
     9721 aacaacgtgg tcatccatac cggcgagctg tcgtctttga aacgctacaa agacgatgtt
     9781 aaagaagtcc gtatgggctt cgagtgcggc ctgatgatta aaggcttcaa tgaaattatg
     9841 gaaggcgacc aactggaatg cttcgacatc gtcgaagttg cacgcaccct gtgattttga
     9901 tgcggaaaaa tgccgtctga agcgttcaga cggcatacga aacgggttct gtatcataca
     9961 gaacccgttt tttgtcgcaa atcggcttca gacagccctc ttgccttatc ccgatttgaa
    10021 tctgacttgc catacaaaca ggcttcagac ggc
//
LOCUS       DAWEYF010000067         9796 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.067, whole genome shotgun sequence.
ACCESSION   DAWEYF010000067 DAWEYF010000000
VERSION     DAWEYF010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9796
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.067"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(12..1307)
                     /locus_tag="WGN93_001157"
     CDS             complement(12..1307)
                     /locus_tag="WGN93_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ0227065.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAIRSQHWEELQQWHEHAQKYYGATHYQL
                     WDNTELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGTKIFEHSPMIRIEP
                     YQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFQPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     DDVKIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1433..2320)
                     /locus_tag="WGN93_001158"
     CDS             complement(1433..2320)
                     /locus_tag="WGN93_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ0227066.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2320..3285)
                     /locus_tag="WGN93_001159"
     CDS             complement(2320..3285)
                     /locus_tag="WGN93_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ0227067.1"
                     /translation="MNLNKLKNKLFRRPGQRVVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNITISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WGN93_001160"
     CDS             complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WGN93_001160"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227068.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4620..4727)
                     /locus_tag="WGN93_001161"
                     /pseudo
     CDS             complement(4620..4727)
                     /locus_tag="WGN93_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="WGN93_001162"
     CDS             complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="WGN93_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ0227069.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5298..6233)
                     /gene="secF"
                     /locus_tag="WGN93_001163"
     CDS             complement(5298..6233)
                     /gene="secF"
                     /locus_tag="WGN93_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ0227070.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6237..8090)
                     /gene="secD"
                     /locus_tag="WGN93_001164"
     CDS             complement(6237..8090)
                     /gene="secD"
                     /locus_tag="WGN93_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ0227071.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRVGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEMAGGKE"
     gene            complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="WGN93_001165"
     CDS             complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="WGN93_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ0227072.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8696..>9796
                     /locus_tag="WGN93_001166"
     CDS             8696..>9796
                     /locus_tag="WGN93_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ0227073.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKISRL
                     DNDTAISTGSLSAARFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAVAEYRLNRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRAFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2511 a         2581 c         2428 g         2276 t
ORIGIN      
        1 gcctgcgacg cttaacggct gtctttccac tgataatatt tcgagccgag gaaagaaccg
       61 agtttgcgca aaaacggttg caggataata ttcggctggc gcaaccgctc aaacggcttc
      121 agacggcatt cgtcccctaa aattgcttcg gcaaccgcca gacctgcaat gcctgttatc
      181 gccatcccgt gtccggaata accttgtgca taaaaaacat ttgcggccaa acgtccgaaa
      241 tgcgggacaa ggttggcggt aatgtcgcac tccccgcccc acgaatattc gattttgaca
      301 tcgtcaagct gcggaaaaac tttaagcata tcttggcgga caagctcggt catacgcgcg
      361 ggattgtcga taaactcgtt atccttaccg ccgaaaagca gtctgccgtc cgcgctgagg
      421 cggtaataat ccaaaatatg gcggttgtcg catactgcca tattgttacg gataagccct
      481 tttgcgcgcg cccccaaggg ttcggtcgca ataataaagg tgctaacggc aatcgccttg
      541 cgttccaaag gctggaatat cgggttcaaa cctgcatagg tattgacggc atacaccaga
      601 tttttgcatt cgacgctgcc ttcgggggtg taaaccagcc aaccgttttg ataaggttca
      661 atgcgtatca tgggagaatg ctcaaaaatc ttcgtaccag cttcggcagc ggcgcgggcg
      721 atgcccaacg tgtaattgag cggatggaga tgcccggaca agggatcgaa ctgtgcgcct
      781 tggtacatat cgctgtcaag ctgctgcttc agttcagtgt tatcccagag ttgataatga
      841 gttgcaccgt aatatttttg ggcgtgctca tgccattgtt gcaattcttc ccaatgctgc
      901 gaacggatgg caaccgtggc ataaccgcgc tgccaatcgc aatcaatggc atgtttgcgg
      961 acgcgttcgt ccaccagttc gaccgcctgc aaagactgtt gccaaaacca ttgcgcttgc
     1021 tccaaaccga cctgtttttc aatttcctcc ataccgcagg cgtaatcgct gataacctgc
     1081 ccgccactcc gtcccgacgc gccgaaaccg atacgcgcgg cttccaacac aaccgtttca
     1141 tgtccctgct ccgccaaggg caatgcagtg cacaaaccac tcaatccgcc gccgatgata
     1201 caggtatcgg ttttcagacg gcattgaagt ttcggataaa cagtatgagg attaaccgaa
     1261 ctgaaataat aagaaggcag atattcttga aaatcagggc gaatcattgt gtttgcttta
     1321 tcgggtatat tttcggacgg aatgatacag gctgtcgagc catatcgtcc aaacagaaaa
     1381 tcggttgaag aaaacaggct gacccagtca tgcggtcagc ctgccttatt aattaatttg
     1441 ctttctcggc agccaatttt tcttggcggt aggcttctgc cgcttctcgg tcacgcttgg
     1501 ttgcctgcct catcatccaa taattgacga tgatgaccaa tgttccgatg atgccgatca
     1561 ggatggttgc caaaacgttc atctgcggat caagacccag cttgattttg gagaaaatca
     1621 cctgcggcaa tgtggatgaa ccggggccgg agaggaatga ggtaatcacc aaatcatcca
     1681 aagacagggt aatgccgagc agaaagcctg aagcgatggc aggggcaatc aaaggcaaag
     1741 tgatgacaaa aaagattttc agcggacgcg cgcccaaatc cattgcggct tcttcgagcg
     1801 attggtcaag ctcaaccaga cgcgaacgga taacaacggt aatgtatgcc atgcacagcg
     1861 tcgtatgtcc taagaaaata gtgaaaaagc cacgatcgaa gtagagatgt tgtaaccatt
     1921 cgctgccctg caaaaatatc tgtacctgaa taatcagcag cagcatagac agaccggtaa
     1981 tcacgtcggg catcaccata ggtgcggaaa tcataccggc gaacaaggta ctgccgcgaa
     2041 aacgtttaat ccgcgccatc gcatagcctg ccagcgtgcc caaaacgacg gcggcaagcg
     2101 aagacacaac ggcaatccgc agcgacagcc aagcggcttc caagatggtg tcgttttcca
     2161 gcaatgcgcc gtaccacttg gtcgaaaagc cgccccaaac ggttaccagc ttggattcgt
     2221 taaacgaata gatgaccaaa acaaccagcg ggatatacag aaacgccagc gacagtgcca
     2281 acatcagttt caagaaccaa gataatttgg atttctgcat tatttggctc cttcttccaa
     2341 ttcgcggttt tcataatgct gaaacagggc aatcggcacg accagcagcg cgaccatcac
     2401 gacggcgacg gcggaagcca gcggccagtt gttttgatcg aagaacgcct gccacaagac
     2461 tttaccaatc atcaggtttt ccgaaccgcc gaccagctcg ggaatgacga actcgccgac
     2521 agcagggacg aaaaccagca tggagcctgc aataatgccg gttttcgaca aaggcagggt
     2581 aatcgtcaag aacgatttga ccggccccgc gcccaaatcg gaagccgctt caagcaggcg
     2641 gttgtcgagt ttcaccagtt gcgtgtatag cggcagaatc ataaacggca gataggcgta
     2701 aaccatcacc aaattgagcg aaaaggcatt gtagaacaaa tccaaaggct cgctgataat
     2761 acccatttta atcaacaggt tgtttacaat accgttatgc ccgagcagac ccatccacgc
     2821 atagacgcgc aacaggaacg atgtccaaaa gggcagcata atggcaagca gcaaaccatt
     2881 gcggacagaa ggattggcac gagaaatcgc ataggcggtc ggataaccga ccaacaggca
     2941 aatcactgtc gtcatcaatg cggttttgat tgaagaccag taggtcatca gatagatatt
     3001 gctgttttca ctgtcgccga acgggttaag ggtatgccaa aaattttgga aaatatcggc
     3061 atagttttga taactgatgg tgatattcag acgacctaaa tcttcgtcga tgctggtcag
     3121 cggcgtaaac ggcggaatgg cgatttcttg ttcggcaaag ctgattttca gcacgatggc
     3181 gaacggaatc agaaacagca ccaaaagcca aatatacggt acggcaatca ccacacgctg
     3241 ccccgggcgg cggaacagtt tgtttttcag tttattaagg ttcattgcat tccccttaaa
     3301 tcaacggaac agtggcgtag gctggttttc cggccagctg atatacacgg tttcgtccca
     3361 agttggcggt gtaatgttgc gtacatacca gtaaggtgca ggaacttggc ttttgacgac
     3421 gcgcccgttg gcgagtttga tatggtatat ggcaaagctg cccaaatagg cgatttcttt
     3481 taccgtgcct ttcgcccagt tgtagtcgcc caaatattcg ggtttttctt tatataaatc
     3541 aatatcctct ggtcgaatac taacccaaag gtcctgctcg ctcggaccac ccaaaccgtg
     3601 atcgatgcgg acgtggtttt ccaaaccttc gcattcgata acggcatagt cggcatgatc
     3661 ttcaatcacc acaccgtcaa agatgttggt ttcgccgata aactcggcag tgaagcggct
     3721 gttgggatag tcgtacacgt cgctgggtgt gccgacttgc tgcaactgac cgtcagacat
     3781 aatggcgatg cgggtcgcca tcgtcatcgc ctcttcttgg tcgtgcgtaa ccataataca
     3841 ggttacgccg acttgttcca gcgtattgac caactcaagc tgggtttgtt ggcgcagttt
     3901 tttgtccaat gcaccgaggg gctcatccag cagtagaatt ttcggacgtt ttgccagact
     3961 gcgtgccaaa gcaatgcgct gctgctgacc accagaaagc tggtgaggtt tgcgtttggc
     4021 aaatttggtc atctgaacca ggcggagcat ttcttcgacg cgcgcggcga tttcgccttt
     4081 aggcattttg tcctgtttca gaccaaaggc aatgttttgt tctacggtca tatgcggaaa
     4141 aagcgcgtaa ctttggaaca tcatattgat ggggcggtca tagggtgcaa gtttggtaat
     4201 atcctgacca tcaaggataa ttttcccctg attggggctt tccatacccg ccagcatacg
     4261 cagcagcgtg gattttccgc tgccggaact gcccaaaagg gcgaagattt cgtgttgata
     4321 aatgtccaag tcgatgttat cgacagcgta attgtcacca aactttttca ccaagccttg
     4381 gatttgcaga taaggtttgg ctgaagacgc agtggttgcg gtcataatgg caatactcca
     4441 ataaaaaaac gagtaccggc aaaacggatt ttcgaatggg tgataaaaag ctgtttgatt
     4501 gctggcggga gttaaacgtt tgatgccgtc tgaaactctt gtaaagcgca cgggcagcat
     4561 gaaatggaac aagattccaa agaactttat attatattag tttatgcggt tttcgggcaa
     4621 tatagtggat taaatttaaa ccagtacagc gttgccttgc cttgccgtac tatttgtact
     4681 gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc cactataaat atggatttga
     4741 gcttgtcgga aagcaacaga aaagaaaaca ccgcccattt ttctgggcgg tgtcggaaag
     4801 cgtaattatt tacgcagacc caagcgggta atcaacgcgc gatacgtatc gggctgggta
     4861 cggcgcaagt aggccagcag gcggcggcgt tggctgacca ttttcaacag gccgcgacgg
     4921 ctgtggtggt cttttgggtt ggctttgaag tggggggtca ggtcgttgat gcggaaagtc
     4981 aacagagcga cttgtacttc ggaagagccg gtgtcgcctt ctttgcgttg gaaatcttta
     5041 acgatttgtg ctttttgttc tacggtcagt gccataatga aaactccaaa aatataagaa
     5101 tccccatagg gattcagaca agtttgccaa gcctgaagac aacggcaaac tccctatgcc
     5161 caagatagga caacgtggca ttatgacaca attcccgcat ttctgcacaa tattttaaga
     5221 ccgtggaagt aaccgttaaa aatgccgtct gaagcattgt ctgcttgaga cggcaatgtt
     5281 cagacggcat atgcgcttca aaccacgatt tcttctttct tcttcggttc tttaccgata
     5341 ttgtcgcggc tcaaaccgaa cattagcaga agcgggctgg caaccaatac ggaagaataa
     5401 atgccgaaca cgatgccaat ggtcaacgcc atagaaaagc cgtgcaaggc cgcaccgccg
     5461 aacaccagca tagaaacaac catcgcctcg gtcgaaccgt gggtaatgat ggtgcggctc
     5521 atcgttgcgg taatcgcgtt gtcgatgact tccggcacgg catgtccgcg catcgccggc
     5581 ttgcggaagt tttcacggat acggtcgaag acgacgacgg attcgttcac agaatagccc
     5641 aatacggcaa ggatacccgc caagacggtc agcgaaaatt cccattggaa gaaggcaaag
     5701 cagccgagaa taatcacgat gtcgtgcata ttggcgataa tggcagatac ggcaaaacgc
     5761 cattcaaaac gcatcgacag gtaaataatg atgccgataa cgacaaaacc taaagccatc
     5821 aatccattac ttaccaattc ctcaccgact tgcgggccga taaattcgac ttggcgcaag
     5881 gtaacgtcgg gactgtcttt tttcagcaaa tccataacct gattggacaa ctgtgcggaa
     5941 gtaacacctt ctttgttcgg caggcggatc atgatgtgtt tgttcgtacc caatgcctga
     6001 acctgtacat cacctatttt cagcgtatcg aggcgttcgc gcatcttatt gacatccgca
     6061 ccctgctgat attggacttc cattaccgta ccgccggtaa attcgacaga gaaattcaga
     6121 cctctggtaa ccaaaaagaa tacggcggca ataaaggtaa ccaacgaaat aaaggtcgtc
     6181 agtttgccgt agctcataaa cggaatatcg cgtttgattt taaagagttc catagcttac
     6241 tccttgcctc ctgccatttc ggctttcggc ttccacaccg aaccgatgga aatattctgc
     6301 aatttgcgtc tgcgtccgta ccacagattg accaacgcac ggaatacgac gacggacgaa
     6361 tacatcgaag tcagaatacc caaacagtgt acgaccgcaa aaccgcgtac cgggccggaa
     6421 ccgaatacca aaagcgcgat accggcaatc agcgaagtca ggttggaatc gacaatggtc
     6481 gcccatgcgt gttggaaacc gagattgatt gcctgctgcg gcggcacgcc gacacgcaat
     6541 tcttcgcgga tacgttcgtt aatcaagacg ttggagtcga ttgccatacc caaagtcaac
     6601 gccagcgcgg ccatacccgg taacgtcaac gttgcctgca tagcagacaa aataccgatt
     6661 aggaacagta tgttggcact caatgcaatg gtagaaaaga aacccatcag acgatagtaa
     6721 accaccatga atgcagcaac gatggcaaaa ccccataaag tcgaatggaa gcctttttcg
     6781 atgttctcct tacccaaaga cggaccgatg gtacgttctt cgacaatctg catcggcgcg
     6841 gcaagagaac cggcacgcaa cagcaaagac gtatcattgg cttcggctgt cgtcatgctt
     6901 ccggaaattt ccacgcgtcc gccggtaatg gcagtacgga taaccggcgc ggttacaacc
     6961 tcggattttc cttggtcgat caaaaccatc gccatgcgtt tgccgacatt tgcggcagtc
     7021 agttcgccga aaatgctgcc gcccgcgctg tccaagctca gactgacggc aggtgcgccc
     7081 atttggtcga aactcggttg cgcatcgttg atgttgtcgc ccgtcagctc gacctgtttg
     7141 ctgattagca gagtttcggg acgatctccg ccgcttgaaa gcagctcata accgctcggc
     7201 acgttgcctt ccaatgcctc gcgcaacttg gcaggatcgt cctccaccat acgcaattcc
     7261 aaagtcgcgg tacggccgat gatgtctttt gccttggcag tatcctgaac gcccggaagc
     7321 tgcacgacga tacggtctgc acctgactgc tggatgacgg gttcggccac gcccaactcg
     7381 ttcacacggt tgtgcagggt agtgatgttc tgtttgaccg catcggaacg cactttattg
     7441 accgcctctt ccgaaagcgt caagacgata ttgctgccgt ctgaattcag cgttgcttca
     7501 ggaaacagct tgcgcaactg cggcagtgcc ttttgcacat cacctgcatc ctgcaaaggg
     7561 acggtcaggc tgtttccagc ctgacgcacc gtgccgctgc ggattttttc gcggcgcagt
     7621 tcgcggcgga tgtcgcccga ataacgttca aacgttttct gcatcgccgc tttcatatcg
     7681 acctgcatgg tgaaatgcac gccgccgcgc aagtccaaac ccaaaaacat cggattggct
     7741 ttgattttcg ccatccattc ggggctgtcc gccaacaggt tgagcgcggt aatataccct
     7801 tcgcccaaag tgttttcgat gacgtcgcgc gctttaagct gcgtttctgt gtctttgaaa
     7861 cgcactttca gtgaattgtc cacaacaaac atcccgtcgg tctgaatacc tgcgtttttc
     7921 agcgcggcat ccactttgaa ttgagtctgt tcgttgatga tgatggcttg tcggttggtc
     7981 gatacctgca cggcgggtgt ttcgccgaat aggttgggca gcgaatacac tgcggcaacc
     8041 gcaatcgtga acacaatcag cagatatttc cataaaggat aacggttcat cattgttcct
     8101 taatggttgg aaccccaccc tttcggtggt gtcggaatcg ggctatttca gaagaggcaa
     8161 aaacccttcc cagccaggca agaccggaag gcggcatctt gaatatgccg ccctgcgtgt
     8221 cggaacatgg tcaagccttc ggttggaatt caaaacaaag tgccgcattc gggctttcca
     8281 gatgcggctt gtcggcacaa atcaatcgac ttttgcggca atcgcattgc gttctacttc
     8341 gacctcgatt tttgtaccct gtccgatatc cacggtaaaa aactgttcgc cgactctggt
     8401 taccttaccc ttgaaacctg ccgccaagac cactttgtcg ccgactttca aggcggcaag
     8461 cattgcctga tgcgctttga atttcttttg ctgcggacgc atgatcagga agtagaacac
     8521 caccataatc aacactaaag gagcaaattg tgcaacagct tgattcataa tttatccgtt
     8581 ctttctaata tggttgaaaa tcgagagggg tatataataa cataagaccg taaacaatat
     8641 atcgggtttg ccgtccgtac cgaccgtata ccgcagcctg cccgtccaca aacccatgtc
     8701 cttgacccgc ctaatcttga aattctatgc actgttgcgc ctttttttgg gcaaaaacgc
     8761 ccgcaccgca tggatttcgc atcccgcctg tgccgggcac gaacccggcg caaaccatcc
     8821 cgattcgccc gaccgcatcc tctgcatcga gcaggcattg cgccgcgccg gtatttggca
     8881 gcacctccaa accatagagg cggaagaaat cagcgatacg cgcctcgcac ttgtccactc
     8941 gagcaaatat ctgaaccgtt tggaatcttg cctgccccaa aaaggcaaga tttcccgcct
     9001 ggataacgac actgcaatca gcacaggctc gctgtctgcc gcacgctttg ccgccggttc
     9061 ggcagttcag gcagtcgaca tggtcatgaa ccgtaaagca tggcatgcct tttgcgccgc
     9121 ccgcccgccc ggacaccatg cgggcagcgg caaagccggc ggattctgcc tgctgaacaa
     9181 cgttgccgcc ggcgtcatgc atgccgttgc cgaataccgg ctgaaccgca tcgccgtcat
     9241 cgatttcgat gtacactacg gcgacggtac ggcagaaata ttcaaagacg atccgcgcat
     9301 cctgtttttc aacctgtttg aaaccgacct tttccccttc cccgaaaaca acgatatgcc
     9361 cgacggcggc aatatggtgc acctgccctt gccgccggga acgggcagcc gcgcattccg
     9421 cgaagccgtc cgcagacagt ggctgccccg gcttgccgca ttcaaacccg aactggtgct
     9481 gctgtcggca ggattcgacg cacaccgtct ggacgaatcg ggcaggctta acctgcacga
     9541 ggcggatttt gcctggctga cacacaaaat cattcagacg gcatcgggct gccctggcaa
     9601 aatcgtatcc gtactcgaag gcggctacac ccttgaacct ctggcacaat ctgctgccga
     9661 gcatatccgc gtgctggcag ggctgggcaa atccgatgcc gcaaccgcct atcagaaaac
     9721 actggaccca acaaaaaaac ggtttgccaa accgaaaacc ggacaggtgc gccaacctac
     9781 ccaatccgac cgttac
//
LOCUS       DAWEYF010000068         9770 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.068, whole genome shotgun sequence.
ACCESSION   DAWEYF010000068 DAWEYF010000000
VERSION     DAWEYF010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9770
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.068"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(313..546)
                     /locus_tag="WGN93_001167"
     CDS             complement(313..546)
                     /locus_tag="WGN93_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ0227074.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(712..912)
                     /locus_tag="WGN93_001168"
     CDS             complement(712..912)
                     /locus_tag="WGN93_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ0227075.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1084..1959)
                     /gene="xerD"
                     /locus_tag="WGN93_001169"
     CDS             complement(1084..1959)
                     /gene="xerD"
                     /locus_tag="WGN93_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ0227076.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLATPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGSVDLDRG
                     CITALGKGDKQRMIPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2011..2451)
                     /locus_tag="WGN93_001170"
     CDS             complement(2011..2451)
                     /locus_tag="WGN93_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ0227077.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            2772..3710
                     /locus_tag="WGN93_001171"
     CDS             2772..3710
                     /locus_tag="WGN93_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ0227078.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKKLLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3839..4132
                     /gene="hfq"
                     /locus_tag="WGN93_001172"
     CDS             3839..4132
                     /gene="hfq"
                     /locus_tag="WGN93_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ0227079.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            4217..4783
                     /locus_tag="WGN93_001173"
     CDS             4217..4783
                     /locus_tag="WGN93_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ0227080.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            4837..5211
                     /locus_tag="WGN93_001174"
     CDS             4837..5211
                     /locus_tag="WGN93_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ0227081.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRVFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            5221..5715
                     /gene="folK"
                     /locus_tag="WGN93_001175"
     CDS             5221..5715
                     /gene="folK"
                     /locus_tag="WGN93_001175"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ0227082.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPCAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDK"
     gene            complement(5842..6321)
                     /locus_tag="WGN93_001176"
     CDS             complement(5842..6321)
                     /locus_tag="WGN93_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ0227083.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYISLSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAMLQI"
     gene            complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WGN93_001177"
     CDS             complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WGN93_001177"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ0227084.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7321..7689)
                     /locus_tag="WGN93_001178"
     CDS             complement(7321..7689)
                     /locus_tag="WGN93_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ0227085.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7809..9428
                     /gene="mnmC"
                     /locus_tag="WGN93_001179"
     CDS             7809..9428
                     /gene="mnmC"
                     /locus_tag="WGN93_001179"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ0227086.1"
                     /translation="MDNLVWDGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASYGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESDTWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPAFVRALLRHPLIGLHEDTPLTDISHDGEKWIASTPNGTFTATHIIYCTGANSPY
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAQLNPTLAESLFAANPPPQKHQGHAAIRCDSPDHLPVVGAL
                     GNIAAMQQTYAKLALDKNYRIDSPCPYLPNAYANTAHGTRGLATAPICAAAVAAEILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
BASE COUNT         2606 a         2979 c         1966 g         2219 t
ORIGIN      
        1 ctaccgatta cacaaccaca tatcatcttt acacaatcat gcttccatca acagcaaaac
       61 atgatatgat tgctgctaat aacatctcac aataaatttt ctaattttta ttgaaaaaat
      121 caataaataa gaattctccc aaccgacaaa taaaataaag aaagggtcaa tatgcaacat
      181 cgaagaagac tggcaattta ccaggcatcc aaacgtgctt cctttaccgg caggtcatcc
      241 gccccgcaaa aacgtaaaga acgttgattt gaaaaaaatg ccgcctgaag tcctgcttca
      301 gacggcattt ttttaccgtt cgagaaactg tttcaacctg tcctcatcca aaaaccagtg
      361 gcagatttcc tcatctcccg ccaacaaaac gggaaccagc tcattgtatt tttcttccaa
      421 aacaggattt tcatccacat cgaccacttc cagcccgaac ccgtattcat tttgaaaagg
      481 tttgagtgca tcgcgcattt tgtggcacaa gctgcaatat tcacgaaaca tcaaggtcaa
      541 tttcatccgc gtttccttat ctgtcaattt gcacacgcca aagccttaga cgcagcagaa
      601 tcatggtcta tttgggaaaa aacaatgttt tcaaggaaga tgatactcaa gtcctgccaa
      661 aaacagcaaa aatgccgtct gaacagttca gacggcattt ccaaaaccgt tttacgcttg
      721 aacattgata cccgccgtaa ccgtcggttg cgcattgtgc gccgtcagaa acgaagcggc
      781 aagctcccca cagcagccgc agcagctcgc tacgcccaat tgcgactgca aatcgcccat
      841 tgtggtcgcg ccggcggcga tggtttcctt gatttgatgg tcggtaacgg cattgcagat
      901 gcagacaaac attttgtgct ccgtgtgttc tcaaactatc gtaccgatag cggcttttat
      961 tatcgtatgc aaatataaat aaaaacggtt cgcattgcaa ggtcggcata cacggtttgt
     1021 cttggtaatt ttttatcaag ttttcatttc cgattgattt cttattaaac cgaagcagaa
     1081 gcctcagttt cgggaatggt gttccttcac tacaccctgc aaccatacgt tggcaacatg
     1141 ggtataaatc tgcgtcgtat tcaaatcggc atgtcccaac atatcctgaa ccacgcgcaa
     1201 atccaagccg tgccgcacca gatgcgtggc aaaggcgtgg cgcaggctgt gcgggctgat
     1261 gtgcccgatg cctgcctgac ttgcatattc tttgacaatc atccatgcca actgacggga
     1321 aatgcccgtc tttttctgac tgacaaacaa tgcgtcgcaa ttcctgcctt tcagcagaag
     1381 tgggcgtgcc tccgtataat agcgttccac ccaatacgcc gactcctgcc ccatcgggat
     1441 catcctctgc ttgtcgccct tgcccagcgc ggtaatacag cccctgtcca aatccacact
     1501 gccgaaattc agcccgaccg cctcgctgac gcgcaagccg gtcgcgtaca tcaattcgag
     1561 cagtgccttg tcccgcaaac cgtgtggcgt atcagtatcc ggagtggcaa gcagccggga
     1621 aatctgctgt tctgtaatca gtgtcggaat attcttgtcg attttgggcg gtttcagcaa
     1681 acgggtggga ttgtccgtcc ttatgccttc acgctccatc catatataca ggcgtttgca
     1741 cgccgataat gcgcgcgcct gcgaactccg ttgctctccg tcaacataaa ccgccgccgc
     1801 caaatccgct tcgtccgcat ccttcagcat tctgcccgat tgggacaggc ggcgggcgat
     1861 tttttccaaa tcgcgccggt aaccgtttaa agtattctga ctgagccgcc tgtccaacca
     1921 cagcgtttca agcagcctgt cgatcaaacc ttcttccata ccgttccaaa caaatgccgt
     1981 ctgaatcttc ttcagacggc atggttcaca ttatcgggaa agcgtttcca atacttcctg
     2041 cgcgtgaccc gccactttga ctttccgcca ttcatgggcg atttctccat ccttattcaa
     2101 gacgaacgta ctgcgctcga tacctaacga ctctttcccg tacagtttct tcaatttgat
     2161 gacatcaaac aggcggcaca ctgtttcatc cttgtcgctc aacagctcga accggaaacc
     2221 ctgcttggcg caaaaattct gatgcgcctt tacgccgtcg cgggaaatac cgaccacggt
     2281 ataacccaat gcctcaaact gttccaaacg cgcattgaaa tccaagcctt ccgtcgtaca
     2341 gcccggcgta ctgtctttcg gataaaaata cacgaccaaa ggcagatgtt ctgccgaatg
     2401 aaaatccgca ccgctgctcg aaggcagggt aaattcatat ttcacatcca tagtcctact
     2461 cccgatattc ccattattca aaacgacacg cagacgcacc gccgcaattg ccaaaccaac
     2521 cccgattcta ccgccccaaa ggacagggat tcaaccgccg gaaacatcca aaccgacaca
     2581 cgacggcatg aaaaatatcc atgtcaaacc acaaaatatg ttccgattta aaaacagaat
     2641 gttataaaac ccaatcccca aaacacaaca agaccgcccg cctacgggca gtctcctgtc
     2701 agacgacata ctttacagat ggctgttttt tcaacaaaat aacgccaata ctcaaaaata
     2761 tggaatcaaa aatgtccatc catactctga aacgcctgcc ctcatcgctg ctgctcggtc
     2821 tctgcctttc cctgccgtca gcccaccttt ttgccgacaa cgacatttta gggcaatttt
     2881 tagaacagaa catgcttacc tcctccgatc cgatagaaat attcgccgaa agcacgatac
     2941 accccaccaa cacccaagcc attacaggcg gtctgattct ctcctcacag tctgccctgg
     3001 tcgtcaacaa caaaaccgga cagatactgt atcagaaaaa cgccgacagg attatgccca
     3061 tcgcctccat ttccaaactg atgagcgcga tggtcgtttt ggatgcaaac ttggacatga
     3121 acgaaaccgt taccattacg cccgacgaaa tcgaccgcat caaagggacc ggcagccgtc
     3181 ttgccatagg tacggcactt acacgcaaaa aactgctgca cctgagcctg atgagcagcg
     3241 aaaaccgcgc cacccatgca ttgggcagaa cctaccccgg cggcatgggc gcatttgtcg
     3301 ccgccatgaa ccgcaaagcc caaagcctcg gtatgtacgg cagccgcttt tacgaaccga
     3361 ccggactcaa cttccaaaac gtttctaccg ccaaagacct gagccttatg gtcaacgccg
     3421 ccgcccaata tccgcaaatc cgcaccaact cgacttccaa ctacgcctcg gtacagacca
     3481 aaaacgggca gcagaactac aaaaactcca atgccctggt cagagaaggc atgtggaaca
     3541 tcgaattgca gaaaaccggc tacatacgcg aagcaggcag gtctatggtt gtcaaagcca
     3601 acattcaaaa ccaacccgtt accatcgtat tgctgaactc gcccacatcc gccacacgcg
     3661 tcaacgacgc ccgcaaaatc gaatcgtgga tgctgcagca acgctcctga catacaaatg
     3721 cccggcggaa aaccgcccaa acacaaaaaa aattggtaat ttttcctatt caaggctaca
     3781 attcgacacg cacagggcgt ctgcccgatt tcacaatcat aataacggag ttaaaaatat
     3841 gacagctaaa ggacaaatgt tgcaagatcc cttcctgaac gccctgcgta aagagcacgt
     3901 tccggtttcg atttacttag ttaacggtat caaattacaa ggtcaggttg agtctttcga
     3961 tcaatacgtt gttctcctga gaaacacttc cgtcacccaa atggtttaca aacacgccat
     4021 ttccaccatc gtaccggcac gctccgtcaa cctacaacat gaaaacagac cccaagccgc
     4081 accgacttcg accctcgtcc aagtggaaac cgtccagcag cctgccgaat aatccgcacg
     4141 aagcatgacg tgtcatatct ttcaatacct taccggacaa cggtaaggta tttttatttt
     4201 cagacagcat ttaaaaatgt tattgcaaaa catccttcca ttcgcccatt gccttttgcg
     4261 gaaggcactt cccgaaggtg gcaatgcttt ggacggcacc gccggcaacg gacacgacac
     4321 ccttttcctc gcacaaaccg caggcatccg ggggaaagtg tgggcattcg acatccagcc
     4381 gcaagccctg agccgcactc gatgccgtct gaaagaagcg agatacgaga atgtgcaact
     4441 catcttagac ggacacgaaa acctgaaaca atatgtttca gaaccactaa atgccgccat
     4501 tttcaacttt ggctggctgc ccggcggaga taaaagcctt accacccata cggaaaccag
     4561 cattcccgcc ctttgcgcaa ccctctccct gctgaaagaa ggcggtatgc ttattgccgt
     4621 cctctatccg ggacacgaaa acggcaaaca ggaggcagaa gcaatcgaac aatgggcaaa
     4681 aaacctgcct caagaacagt ttgccgtttt gcgttacggc tttaccaacc ggaaaaacaa
     4741 cccgccctat ctgttggcat ttgaaaagtt acgtcaaaaa taaatgtttg cggtaaaata
     4801 agccgattct aacccttatt ttgatacgag ccgaccatgc agtatctgat tgtcaaatac
     4861 agccatcaaa tcttcgttac catcaccatt ttggtattca acatccgtgt tttcctactt
     4921 tggaaaaatc cagaaaagcc cttggtcggc ttttggaagg cactgcccca ccttaacgac
     4981 accatgctgc tgtttacggg attgtggctg atgaaaatta cccatttctc cccgttcaac
     5041 gcgccttggc tcggtacaaa aatcctgctt ctgctcgcct atatcgcatt gggtatgatg
     5101 atgatgcgcg cccgtccgcg ttcgaccaag ttctacaccg tttacctgct cgccatgtgt
     5161 tgcgtcgcct gcatcgttta ccttgccaaa accaaagtcc tgcctttctg aaacaccgtt
     5221 atgaacaaca gacattttgc cgtcatcgcc ctgggcagta atcttgaaaa ccctgcccaa
     5281 caggtacgcg ccgcattgga cacgctgtcg tcccatcctg acatccggct tgaacaggct
     5341 tcctcactgt atatgaccgc ccccgtcggt tacgacaatc agcccgattt cgtcaatgcc
     5401 gtctgcaccg tttccaccac tctggacggc attgccctgc ttgccgaact caaccgtatc
     5461 gaagccgatt tcggacgcga acgcagcttc cgcaacgcgc cgcgcacatt ggatttggac
     5521 attatcgact ttgacggcat ctccagcgac gacccccgac tcaccctgcc gcatccgtgc
     5581 gcgcacgaac gcagtttcgt catacgccct ttggcagaaa tcctccctga ttttgtttta
     5641 ggcaaacacg gaaaggttgc cgaattgtca aaacggctgg gcaatcaagg catccgtctt
     5701 ttaccggata agtaattccg cacgcggatg ccgtctgaat gccggtttca gacggcattt
     5761 ttcctttgcc gccaacacgc gtgcaaaaaa atcgcccctt ggaaaagggg cgcaaaagga
     5821 acacaaacca ctaccaaaac tttaaatctg caacattgcc tgccgcatac tgtatccgac
     5881 aggatataaa gccctcacta aatcgtttcg agaaatccaa acttcttcat cgccgacaga
     5941 aaatctgcct ttctccggca ccagctccaa caaaaacggt tgaaccgccg tatgcagcct
     6001 gtccttacac cgccccagct ttctggacaa ggcggacagg gcacgcttat agacactatc
     6061 cttgcggtca agttcccgcg cactgccgac ccagctcaaa cgaaggttgc ggctttcatc
     6121 ctcaatcagc aaaatgcctg ttttgacttc ccccacctct ggctcgcatg aaagcgaaat
     6181 ataatatttg ccgtcgatgt tgacatacgc cgcctcatgc acctgacagt tgcagccgga
     6241 agtggcaagc agcgaataaa cagaatcccg atgcagtttc aaaatatcaa gggaaatctg
     6301 tttgaaaata ctttccggca tttttccctc ctttcgtctg ctgcgttgtt tactggattg
     6361 actgcattat acagacatct cccaatcttg caaatgataa ttgttcctat tttttaaaaa
     6421 atttataaat tattgataga tatgtgaatt aattttaaga tttaaaatct ctttctcaaa
     6481 aaaacacaaa aatgccgtct gaaacgtgtt cagacggcat tggctgcaca gccagtccgt
     6541 ttaaaatttc acgcccttat gcagcgcaac gatccccgca ctcatattat gatagtccac
     6601 actgtcaaat ccggcatcca gcatcatttg ctttaaagtt tcctgatcgg ggtgcatacg
     6661 gatggattcg gcgagatact ggtagctgtc cgcatctttg gcaatcagtt tgcccatgac
     6721 cggcagcagc ttgaacgaat agaaatcata cgcgccttcg agcggcttgt agattttgga
     6781 aaactccaac accagcaacg tgccgccagg tttcaaaaca cgatacatct ctttcagcgc
     6841 ggcatcttta tgcgtcatgt tccgcaagcc gaacgccacg gaaactaagt tgaaataatt
     6901 gtcagggaaa ggcagttttt ccgcatcggc aagcgacacg ggcaaaatca tgccttcgtt
     6961 caacagacgg tcgcgcccga cggtcagcat agaggaatta atatcggtca gccaaacctc
     7021 gccttccttg ccgacccgtt tcgcccaacc gcgcgacaaa tcgcccgtac cgcccgcaat
     7081 gtccaacact ttatcgcctt ttttcaggtg cgccgtgttg atggtgaaat gcttccacac
     7141 cctgtgcagc cctgccgaca tgacatcatt cataatgtcg tagtttttgg cgacggagtg
     7201 gaacacttcc gccactttgc cggctttttc atcttcgttg accgtgctaa acccgaaatg
     7261 cgttttttgt ccgcccatct tctgaccacc tccctgatgc cgtcctccgg catcccaaac
     7321 ttaacaatct gattgctttt caaaacgcga cgcaccagcc gccgccaatt tgtccaaata
     7381 ttcctgccac atcgcatcgt atccgtatgc cagtctgtgc agatacgccc aatcgtaaag
     7441 accgctgtcg tgcccgtccg aaaaactgat tttcagcgcg tactgtccga caggctgcaa
     7501 atccgtaatt tgcacatctg ccttaccggt ctgcaaaaca tcctgtccca caccgtgtcc
     7561 gcgcacttcc gcactcggcg aatagacgcg taaaaattcg gcaggcagat ttttaggttc
     7621 gtccccataa gtcaaaacca acacggtacg gtttttcaac aaacggattt caacaggaat
     7681 attattcaaa aaacacctcg gttcggcata caatatccgg caggcgcagg cgtgccttca
     7741 aacggcgcgt attttaacag ctttatcccg ataccgatat tcaaacccac atttcagacg
     7801 gcattgatat ggacaatctc gtatgggacg gcattcccga catccgcaca ctcgaccaaa
     7861 ccatccgcaa acacgcacac ccgctcaacc tgattgtctg cctccccgat aatcagattc
     7921 ccgattttca aaccgcacaa gatgcttcgg acgcggaatg ccgtctgaag caccgtttgg
     7981 atcaggcaac gcagtgcctc cagttcgaca gcatcaacct catcgaacac atcctgcccg
     8041 atgtccgctt ctggctggtt cccccttcac gcacccgccg cctgcacgaa cacttccacc
     8101 acatttcctg gcagaccgaa gccatcccgc aaaccgaaag taagcccgac aaaccctggt
     8161 ttgcacttcc acaaacatcc gaacggcaaa aaccggaaca catcctcgtt atcggcgcgg
     8221 gcatatccgg cgcggcaacc gcccacgcct tagcatcata cggcatttcc gttaccgtat
     8281 tggaagcccg aaaagccgcc caagccgcca gcggcaaccg ccaagggctg ctctacgcca
     8341 aaatctcgcc gcacgacacc gaacaaaccg aactgctgct tgccggctac ggctacacca
     8401 aacgcctgct cggacacatc ctgcccgaat ccgacacttg gggcggcaac ggcatcatcc
     8461 acctcaatta cagccgcacc gaacaacaac gcaatcacga attgggtttg caaaaacacc
     8521 ataaccacct ctaccgcagc atcacgcagg cagaagccga aaaaatcgcc ggtatcccgc
     8581 tgtccgtccc atacgaccac ccttcatgcg gactctactg gcaacacggc gtatggctca
     8641 atccgcccgc attcgtccgc gccctcctcc gccatccgct gatcggactg cacgaagaca
     8701 caccattaac cgacatttcc cacgacgggg aaaagtggat tgcaagcacg ccaaacggca
     8761 catttaccgc cacacacatc atctactgca ccggtgcgaa cagcccctac ctacccgaaa
     8821 ccaacctcgc cgccctgcct ctcaggcaaa tacgcggaca aaccggcctc acaccgtcca
     8881 ccccgttttc cgaacaactg cgttgcgccg tttcaggcga aagctacatc agcccgtcgt
     8941 ggcacggact gcactgctac ggcgcgagtt ttattcccaa cagcagccat actggatgga
     9001 acgaagccga agaagcctca aaccgccaag cattggcaca acttaacccc acccttgccg
     9061 aatcattgtt tgccgctaac ccaccccccc aaaaacacca agggcacgcc gccatacgct
     9121 gcgacagccc cgaccatctg cccgtcgtcg gcgcactcgg caacattgcc gctatgcagc
     9181 agacctacgc caaactcgcg ctggacaaaa actaccgcat agattccccc tgcccgtacc
     9241 tgcccaatgc ctacgccaat accgcccacg gcacacgcgg gcttgccacc gcccccatct
     9301 gcgccgccgc cgttgccgcc gaaatcctag gcttgcccca tcccttttca caacgcctgc
     9361 gccacgccct acaccccaac cgcaccatca tccgcgccat cgtcagaagg aaggatctaa
     9421 ccccttaagc ctttgccgca tgccgtcccg accacagaaa atcatattca aataaacata
     9481 ccaatcctga cggtaaaata tcgaaaacac ccataacgtt ttcttcccaa aataaggagt
     9541 aaggaatgcc taacaaattg cctttgctgt ccaagatgaa tattccgtaa cattcgaaga
     9601 cttccttaac cctgccagcc gtttcggttt ctgtaccccc tgttagataa ggaaggaatg
     9661 aaaaagccct gttgattgta tgaagtaaag ggcgttaatt tttgttaatc ttcccttctc
     9721 aggaactcaa tatataagga tgttaatttt tatttccctt ctcgaggact
//
LOCUS       DAWEYF010000069         9641 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.069, whole genome shotgun sequence.
ACCESSION   DAWEYF010000069 DAWEYF010000000
VERSION     DAWEYF010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9641
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.069"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..546)
                     /locus_tag="WGN93_001180"
     CDS             complement(<1..546)
                     /locus_tag="WGN93_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ0227087.1"
                     /translation="MFCTVSHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQR
                     LKQQAADLGITHAVTFLGALQPEAVLDLMRNSDAFVLASRTETFGVVYIEALSQGLPV
                     IATRCGGAESIVSDGNGYLVPVDDDDALADALIKMYEHHSDFEPARLRENCLNEFGEN
                     AVIGRLIGIFRQAIAEYGKKIP"
     gene            complement(578..961)
                     /locus_tag="WGN93_001181"
     CDS             complement(578..961)
                     /locus_tag="WGN93_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ0227088.1"
                     /translation="MYFFPRFPFIDIDCIRWVCAGLKAFKHYIRENGLPDLIHAHRMN
                     YAGILAQKISQKYGIPYVVTEHSSTITRGLIRPHQWQPMEKAAAHASALLAVSRHFAH
                     VLQHKYGCEWQYLPQHTGRNIQPTV"
     gene            1330..2034
                     /locus_tag="WGN93_001182"
     CDS             1330..2034
                     /locus_tag="WGN93_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ0227089.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASYGVEGTDSVA
                     PGVEEISISVNGTVQF"
     gene            complement(2099..2665)
                     /locus_tag="WGN93_001183"
     CDS             complement(2099..2665)
                     /locus_tag="WGN93_001183"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ0227090.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2731..3146)
                     /locus_tag="WGN93_001184"
                     /pseudo
     CDS             complement(2731..3146)
                     /locus_tag="WGN93_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3208..4107)
                     /locus_tag="WGN93_001185"
     CDS             complement(3208..4107)
                     /locus_tag="WGN93_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ0227091.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4138..5595)
                     /gene="der"
                     /locus_tag="WGN93_001186"
     CDS             complement(4138..5595)
                     /gene="der"
                     /locus_tag="WGN93_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ0227092.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5745..6374)
                     /locus_tag="WGN93_001187"
     CDS             complement(5745..6374)
                     /locus_tag="WGN93_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ0227093.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQNEINAELAKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6375..7670)
                     /gene="hisS"
                     /locus_tag="WGN93_001188"
     CDS             complement(6375..7670)
                     /gene="hisS"
                     /locus_tag="WGN93_001188"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ0227094.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRTQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7797..8339)
                     /locus_tag="WGN93_001189"
     CDS             complement(7797..8339)
                     /locus_tag="WGN93_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ0227095.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVGQIRQARAE"
     gene            complement(8511..8702)
                     /locus_tag="WGN93_001190"
     CDS             complement(8511..8702)
                     /locus_tag="WGN93_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227096.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIDSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8735..9271)
                     /locus_tag="WGN93_001191"
     CDS             complement(8735..9271)
                     /locus_tag="WGN93_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227097.1"
                     /translation="MKKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9439..9639)
                     /locus_tag="WGN93_001192"
     CDS             complement(9439..9639)
                     /locus_tag="WGN93_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227098.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
BASE COUNT         2254 a         2308 c         2456 g         2623 t
ORIGIN      
        1 cggtattttc ttaccgtatt ctgcgattgc ctgtcggaaa atgccgatca acctgcctat
       61 aacggcattt tcgccaaatt cgttcagaca gttttcccta agtcgggcag gttcaaaatc
      121 agagtggtgt tcatacattt tgatgagtgc gtcggcaagg gcatcgtcgt cgtcaacagg
      181 aaccaaatat ccgttgccgt ctgaaacaat agattccgca ccgccgcagc gtgtcgcaat
      241 gacgggcaat ccttgggaca gtgcttcgat atagaccacg ccgaaggttt cggtgcggct
      301 ggcaaggacg aatgcgtcgc tgttcctcat caaatccaag actgcttcgg gctgcaatgc
      361 gcccaaaaat gtaacggcat gggtaatgcc caagtctgcc gcctgctgtt tcagccgctg
      421 ttcttcctgt ccgctgccgc cgatgttcag gcgcagttgc gggcattgtg ccaacgcccg
      481 ggcaaaggca gtgagtagga catcgtgtcc tttgagacgg cgaaggtgcg agacggtgca
      541 gaacacgaaa tgcggtttgt tgtttttttc tctttgttca aacggtcggt tgaatattcc
      601 gcccagtatg ttgggggagg tactgccatt cgcagccgta tttgtgttgc aggacgtgtg
      661 cgaaatggcg gctgacagcg agcagtgcgg aggcgtgcgc cgctgctttt tccatcggct
      721 gccattggtg gggacggatc agaccgcgcg tgatggtgct gctgtgttcc gtgacgacat
      781 aggggatgcc gtatttttgg gaaatttttt gggcgagtat gccggcatag ttcatgcggt
      841 gggcgtgaat caggtcgggc agcccgtttt cgcggatgta gtgtttgaaa gctttcaaac
      901 ccgcacacac ccagcggatg cagtcgatgt cgatgaacgg aaagcggggg aagaaatata
      961 tgccgtgcca tgcatagatg tccaaaccgc tttgccgata ttttgcaaaa ccgtaaggcc
     1021 ggtcaggatg cttgctgttt ctttccgcaa gtagcggaac atcggtgcaa gcacggcggt
     1081 tttgatgcct ttcctctgca atgccagtgc ctgattttga aaaaaatccc gtccacatcc
     1141 tgttcggatt gcggatacca tgaggggatg acgaggacgt gcaagggttc gggcatagtg
     1201 ggattccgta tcggaaaggc ggttattata agacagacgc agaccgaata tttaaattgt
     1261 tgccttacgc taatgcaatt tagcgcgccg atatgctaga ttggcggttt tatgagtgag
     1321 gatacggata tgttgcgttc tattttggcg gcttccctat tggcggtatc ttttccggca
     1381 gcggctgaag cattgaatta caatattgtc gaattttccg aatcggcggg tgtcgaggtg
     1441 gctcaggata caatgtccgc acgtttccaa gtggcggcgg aaggacggga caaaaatgcc
     1501 gtcaatgccg agtttgttaa aaaattcaac agttttaaca gaaaatcgaa aaacggcagc
     1561 tttaaaaccg aattggtatc gcgcagtgcg atgccgcgct accagtacac caacggcaga
     1621 cgcattcaaa caggctggga ggagcgtgcg gaatttaagg tcgagggtag ggattttgat
     1681 gcgttgaacc gttttattgc cgatgttcag gcagatgccg cgttggaata tacggatttc
     1741 catgtgtcgc gcgaacgccg caacgaggtc atcgatcagg tcagcaagga tgccgttttg
     1801 cgtttcaagg cgcgtgccga aaagttggcg ggcgttttgg gtgcgtccgg ttataaaatc
     1861 gtcaaattga atttgggaca catcggcagc catatcgcgg gtgggggagc tgctcaggca
     1921 aaaatgcttc gtgccatgcc gatggcggca agttacggcg tggagggtac ggattccgtt
     1981 gcacctggtg tggaggaaat cagcatcagc gtcaatggga cggttcagtt ctgatttgag
     2041 gtgaacggta aatgccgtct gaaacccgac gataagggtt cagacggcat tttgtgtttc
     2101 aggctttggg cagggttacg ccggtttgtc ccatgtattt gccgttgcgg tctttgtatg
     2161 aagtttcgca cacttcgtcg ctctcgaaaa acaggacttg cgccacgcct tcgccggcgt
     2221 agattttggc gggcaggggg gtggtgttgg aaaattcgag ggtaacgtag ccttcccatt
     2281 ccggttcgaa cggggtaacg ttgacgatga tgccgcagcg tgcgtaggtc gatttgccca
     2341 agcagacggt caggacgttg cgcgggatgc ggaaatattc gaccgtgcgc gccagtgcga
     2401 aggaattggg cgggatgatg cagcagtcgt cttcaacggt aacgaagttt tttgggtcga
     2461 agtttttggg atcgacgatg gtgctgttga tgttggtgaa gattttaaat tcgtttgcgc
     2521 agcggatgtc gtagccgtag ctggacgtac cgtaggagat gatgcgtttg ccgtcggctt
     2581 ctttgatttg gttcggctcg aaggggtcga tcatgccgaa ttcttcgctc atgcggcgta
     2641 tccatttgtc ggacttgatg ctcataatgt tttccttgtt tcttgcagtg ttcggacaaa
     2701 gcattggggg atgccgtctg aaaacggggc ttatttgttt ttaggcagtt tcacttcttt
     2761 aatcatgccg ttttcgcatt tcataatgaa gagggtttcg ccgttttgcg agacggtaaa
     2821 tctgccgtgt gccaagcctt ttttgaacgt gcccgagagt accatgttgc ggaatttggt
     2881 actgtcggaa ttgaacggtt cgataaatat ttcgcggttg gcggcaacgg tataaacgcc
     2941 ttgtccgtcg aatttgccat ttttaaacga accggtatag ttgcgcccgt cttggcagcg
     3001 catgtgcctt tgcctgaagg aagcccgtct tttccgactc cgccttcgta ggtgcagccg
     3061 ggttcttgat aggaagtcag aacggcggcc gaagtgggga gggcgaacat catggcgggc
     3121 agtaggaatg cgagatgttt aagcataagg gttattccat tggattttgg ttgacggtat
     3181 tttgtcgtga aaaagccgtc tgaaaaatca atcttgccag ccgcccaaat aggaaaccag
     3241 ttcttccaac atggtgctga cggattccgc catcagaatt tgcgaggcga aggcaaggcc
     3301 ggcggcatcg tcgccgttgc tttcggcttc ttcctgcaat acgtcgaggt attggatgcg
     3361 cttgagtgtg aagtcttgag tgaggataaa ggcaatttgt tcgcgccaca ccaagcccag
     3421 ttgggtaacg gttttaccgt ttttgacgtg ttgaaccact tcgtcggcgg ttaaatcttg
     3481 tttggatact ttgacgacgg gaacaatatc gcccgtacct ttgagttcgc aatcgctgtc
     3541 taattcaaaa ccgccttcgc aatgcccttg caacagccag ccggtcatca aggaagaggg
     3601 cgattgcttg gtattcggca gcgaggcttc caaaccgccc aaagcttcgc gcagcttggt
     3661 caggatgttt tctgctttgg cggaagccgc gttattgacg agcaggtagc cgtggcgggt
     3721 gttaaacacc gcttctgtac ggctgctgcg ggtaaacgct cggggcagca ggtcgtctgt
     3781 aatttgctct ttaagctctt gtttttcttt gcgaccgaca ttgcgggctt cattgttttg
     3841 gatttccgct accttctctt ccaaaatatc gcggatgacg ccggcaggca ggactttttc
     3901 ttcttttttc agggcgacgc gcaaggtaaa gtcggcaggg aaaacgagtt caggggagaa
     3961 tgaaaccggt gcggtaaagc cttcgctgaa ccagtctaag ccttggcaat gggtaaattc
     4021 agcttcagca agtttgtcgg caagtacgtc tgcctcaggc agcttttctt tgttgagcgg
     4081 ataaaaacta atctgcttga accacataat gtttcctatt gtttgaaatg tcgggaatta
     4141 tttgctgaat tgttttttca cactgacttt ggttttcttc ttgaagcggt ttttctcttc
     4201 ctttcggcct tcgcgtttct caatacggtt gctcaggctg acgcggcgca gcggtttttt
     4261 cttcggtttg tcttccgcat tttcatacgg gttttccgaa acattgtatt gaattctgag
     4321 cggcgtgcct tgcagattga aggctttgcg gaacgtttgg gtcagatagc gcgtatagct
     4381 gtcggaaatc gcgtgcagcg aattgccgtg taccacaatt acgggagggt tcatgccgcc
     4441 ttggtgggca taacgcattt tcggacgcac caagccggca cgcggcggtt gctgacgctc
     4501 gatcgcgctt tgtaatacgc gcgtgatttt cggcgtcggc atcttaatca tcgccgcgtt
     4561 gtaggcagcc tgaatgctgt caaacaaacc gtctataccg cgctctttca atgcggaaat
     4621 aaagtggaac ttggcaaaat cgaggaaata cagtttgcgg ttgatatcgc gtttcacttg
     4681 ctcgcgacgc tcttcgctga tgccgtccca tttgttgacg gcaaccacca aggcgcggcc
     4741 tgcttccaaa gcaaaaccgg caatcgtcgc atcttggtcg gcgatgtcct gctgcgcgtc
     4801 caataccaaa acagcgacgt ttgccgcttc aaccgcctgc atcgctttga taacggagaa
     4861 tttttctact gcttcatcca ctttgccgcg acggcgcacg cctgcggtat cgatgatggt
     4921 aaacggtttg ccttcgcgtt cgaaatcgat gtggatgctg tcgcgtgtcg tgcctgccat
     4981 atcgaaagca atcacgcgct cttcgccgag gatggcgtta accagtgtgg atttgccgac
     5041 gttcggacgg ccgatgacgg caaagacggg atgttttgca tcggcttctt cggcttccgg
     5101 ctctgggaaa gtttccaaaa tatcttcaat cagataatac acgccatcgc cgtgcgcacc
     5161 tgaaataaca taagggtcgc ccaaagcaag ttcgtagaac tcggcggcaa gcacggccct
     5221 gttgccgcct tcgcctttgt ttaccgccag ataaacaggg cgcgggcttt ggcgcaggcg
     5281 gtcggcaatg attttgtctt gcggggtcag gccggtacgg ccgtccacca aaaacacaac
     5341 cgcatcagct tcatcgacag cctgcaaggt ttgttttgcc atttcgtgca aaatgccgct
     5401 gtccacaacc ggctcgaaac ctccggtatc gatgaccaaa taaggtttgc tgccgacttt
     5461 gccgtgtccg taatggcggt cgcgcgtcag accgggcagg tcgtgtacga gcgcgtcttt
     5521 ggtgcgcgtc aaacggttga ataaagtaga tttgccgacg ttggggcggc cgacaagcgc
     5581 gatggttggt ttcatgattg ggtctttctg tgtcaagtgc cgttcgggag aactgaacac
     5641 aagcaggtgt ccgttgggac acggcagatg gttttacggg aattgccgta ggatagtgtt
     5701 gtctgaaatg ccgtctgaag agagggtggc atttcagacg gcatttattt cagcgaatcg
     5761 agtttcattt gaaccaattc acgaccgaca gaatcttgag gcattttttc taaagcctga
     5821 ccgtagtttt ttaaggcttc ctggcttttt ccctgtgcgg catagacatc gcctttggtt
     5881 tccatcagca ggggggagaa gtccgcttca accggcgtgt cgagcgcggc aagtgcggca
     5941 tcgtattttt tttgttgcaa caacacaacg ccgagacgct gtgccgccaa cgcttgaatc
     6001 aggctgtctt tttggttgga caacacccat ttcaaatggc cttcagcaac atcgtaacgc
     6061 tgcgcgtcaa attcggttgc cgccgccatc agcgtggctt gggcggcgga aatggaatgc
     6121 gggtagcttt gttggagttt ggccaattcg gcattgattt cgttttgcgg ggctttgttt
     6181 tgcgcctttt ccacgatgtt tgccagcacc gccgccgctt cctgattttg ggaagccgca
     6241 cggttttggt aaaccgtgta tcccaagtag ccgagtgccg ccaaaatcag caaggcaaac
     6301 agccatttgc ccgtggtttt ccaaaaatat ttaaagttgt ctaactcttg ttgttcttcg
     6361 agatgggctg ccatttatgc gttcttccat tgttgtaaag tatgggttaa atcctcggcg
     6421 gcgacagttt gctgaccgtg tgcgccgttc atgtctttga gcgtaaccgt accgttcgcc
     6481 agttcgtctt gcgcgacaat cagggcaaag cgcgcgccgc tgttgtcggc ttttttcatt
     6541 tgtgctttca ggctttgata gccggaatgc tgcattacat tgaaaccttg cgtgcgcaag
     6601 gcttgcgcgt atttcatcac ctgcaagtcc gccctttcgc cttggtgcat tgcatagaca
     6661 tcaggcgcag cgttcacttc cagcgagccg tattcgctca ccaaaagcag cagccgttcg
     6721 atgcccatcg caaagccgat ggacggcgca ggtttgccgc caagttcctc aatcaaacca
     6781 tcgtaacggc cgccgccgca cacagttgcc tgcgcgccga gtttgtcggt cgtccactca
     6841 aaaaccgtct gattgtaata atccaaaccg cgaaccaagc gcggattttc aatatattga
     6901 atacccaaac catccaacat cgccttgaag cgtgcatagt ggttttgcga agcctcaccc
     6961 aagtaatcca ccagacgcgg cgcggcgttg cagatttcct gcaaatcagg gtttttcgta
     7021 tccaaaacgc gcaaaggatt ggttttcaga cggcgtttgc tgtcttcgtc caatttatct
     7081 tcataacggg tcagatattc aaccaatgcc gcacggtgtg ccgcgcgttc ctcacggttg
     7141 cccaaactgt tgatttccaa agtcagatat tcgcggatac ccaatttttc ccataagtcg
     7201 gcagacatcg cgatgatttc cgcatcaata tccggacctt caaaacccaa agcttcgata
     7261 ccgacctgat ggaactgacg ataacggcct ttttgcggac gctcgcggcg gaacatcggc
     7321 cccatatacc acagcttttg cgggctattg tacagaaggt tgtgttcgac caccgcacgc
     7381 agacaagaag ccgtaccttc aggacgcagg ctcaaactca aagaatcgtt tgaatcggag
     7441 aaggtgtaca tttccttgcc gaccacatcg gtttcttcgc cgatggagcg gacaaacaaa
     7501 ccggtttgct cgacaatcgg cgtacggatt tgctgataac cgtaagcgcg tgtccagcgg
     7561 ccgaccgtat cttcaaacgc ctgccaaaac gcagccgtca gtttgaaatc tttttgctcg
     7621 acaggcagaa ggtcgttcat gcctttgacg gattggattt tttgtgccat ttcaagtaag
     7681 aatgcttaaa tcaaattgcg ggcgattata gcggattttt aagggcttgt gaggatagag
     7741 atggtttgcg gacgggtaaa aatgccgtct gaaacagttt tcagacggca tttgacttac
     7801 tctgcacgtg cttgcctgat ttgtccgact gcaaactctg tctgccgctt gggatgatgt
     7861 gtgaaaaaca atttatttga aattgtctcg gcttttttcg gcacgaccgc caaaatctta
     7921 cctgccaaat ttccctcacg ggtttgccaa gcatccaaaa actgcgccct gctcattgaa
     7981 acatgcccca gcgacgggtc ggcaagcaaa accgtattgc cgtctatccc gcgcaatacc
     8041 gagaaatgat catccttgcg gtatttcaga tacacgatga cggggatttt caactgtgcg
     8101 agctgctcga aagacagggc atagcctttc gcttcaaaac ccaaatctgg cataatgcgc
     8161 cgcatatcct caaacgacgc gcgcatctgc tccttatcca gctttttcaa cacttcttct
     8221 tccgtcagcg tttgcccgta aaaattgttc aaaagcgtcg ccaccgaagc cgccccacag
     8281 gaaaaatcca aatcctgctt tacaatattg aaatcccgcc tttctttcca actctgcact
     8341 ttgatttttc cgtaaacaac aggattatcg ttaaacatcg gtgcagcatt caaacgataa
     8401 gataaagaaa cgacaacaca cgccaacaga aaaacatatt tgaacttcat catattgtcc
     8461 acataaaggg cagcctgaaa atctttcagg ctgcccttgt caaattattc ctagctttcg
     8521 gcttttttgg caaaccaaac aatccgatta cccgcataat actttccatt tattgaaatc
     8581 cgacaagccg cgcccaaaaa atgccatgca ctgtcgattt ccgcagcaat ctttgtaccg
     8641 ttttcttcaa attccaaata ttcacccaat aataaacttg aaacagaacg cgtgggcagc
     8701 aagtgcccac cctacgctta ttcaaataat ttgattaaat aaagaataaa gaaaatgcat
     8761 caggaacaaa attataatct gccacctgac tcacaccgct tttaaagtaa ggggcatcaa
     8821 aatcaaaacc gcaaaaaaaa taatttttgc attgattttt aatagattta aaattcgaat
     8881 atagtgtttc tccagattta aaaagtttat ctttatctat atatttgatg ctttccctat
     8941 ccaaaataaa tatttcaaac attaaaaaat cattacatga ccaagccaaa tcataaattt
     9001 gattcaaatg ggtatcataa agataaaaat aataaggttt gggaacaggt aaaatattta
     9061 atggaaaagg aggactaatt ttcttaatat ctgatgactg atatccatat ctttctatat
     9121 tcttaaaaat ttcatctttc ttaagataac aagacattct gacaatcaca acctgttcat
     9181 cggatatatt atctatttgc atggcgcgta taacacgcca tgcctgatta aaattagtct
     9241 cccttacctt agaatctatt atctttttca aagatgaaaa tgccccttat cttgaactct
     9301 ccagttagaa cctggaagtt tcgtacctct taaatgtgta ttaatatttc ttatagtttc
     9361 attaaaatgc cacgcgctgc cgatttcaac ggtaattttc gtaccgcttt cttcaaattc
     9421 caggtattcc cccattagct aacgcaaaga agcagacgcc atttcggctt cgttatgata
     9481 aacccgcctt ccgttgatat agacttccgc ccctgtccgc tccaaattcc aaaaattccg
     9541 tactgaaatt tccatatccc gatattgtgc agaccatgtt ttttcgaagg ttttcataaa
     9601 atttcctata cctgtccaat cggcacatat caattgcatt a
//
LOCUS       DAWEYF010000070         9512 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.070, whole genome shotgun sequence.
ACCESSION   DAWEYF010000070 DAWEYF010000000
VERSION     DAWEYF010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.070"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            134..343
                     /locus_tag="WGN93_001193"
     CDS             134..343
                     /locus_tag="WGN93_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ0227099.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            432..1646
                     /locus_tag="WGN93_001194"
     CDS             432..1646
                     /locus_tag="WGN93_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ0227100.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKSYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVSQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="WGN93_001195"
     CDS             complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="WGN93_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ0227101.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHSGVNVPQVKQRLQQHLSSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRG
                     DVYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4572..5582
                     /gene="trpS"
                     /locus_tag="WGN93_001196"
     CDS             4572..5582
                     /gene="trpS"
                     /locus_tag="WGN93_001196"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ0227102.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANSENNQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFKEIFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAAKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5650..6195
                     /locus_tag="WGN93_001197"
     CDS             5650..6195
                     /locus_tag="WGN93_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227103.1"
                     /translation="MLKTSFAVLGGCLLLAACGKSENTAEQPQNAVQSAPKPVFKVKY
                     IDNTAIAGLDLGQSSEGKTNDGKKQISYPIKGLPEQNVVRLTGKHTNDLEAVVGKCME
                     TDGKGAPSGWAANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ
                     NGRYVLEIDSEGAFYFRRRHY"
     gene            6514..6837
                     /locus_tag="WGN93_001198"
     CDS             6514..6837
                     /locus_tag="WGN93_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227104.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKM
                     KDAAK"
     gene            complement(7046..8554)
                     /gene="ppx"
                     /locus_tag="WGN93_001199"
     CDS             complement(7046..8554)
                     /gene="ppx"
                     /locus_tag="WGN93_001199"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ0227105.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQAAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALSERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEVV"
     gene            complement(8671..9402)
                     /locus_tag="WGN93_001200"
     CDS             complement(8671..9402)
                     /locus_tag="WGN93_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ0227106.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLRLSLGYKNR
                     SVTRSFGIVPFIGQNLLGGSRYNFVGGFNADFSRRLSERWRLTLNVGNMWKRYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHDLTKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTLVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
BASE COUNT         2213 a         2473 c         2492 g         2334 t
ORIGIN      
        1 tgcggcttcg tcgccttgtc ctgatttttg ttaatccgct atatcgattt gaatttttca
       61 gaaaatgaag cggacgtttg ggcggaggca acttgtttga taagatagca atatttcaaa
      121 acggagaaag atcatgcctt atgtcaatat taaagtaacc ggcggcaagg aagcaccgac
      181 tgccgcgcaa aaagcggaac tgatcggcgg cgtaaccgaa ttgctggcac gcgtgctggg
      241 caaaaatccc gaaacaacgg ttgtcgtgat tgatgaagtg gataccgata actggggaat
      301 aggcggcaaa agcgtcagcg aacggcgcaa agagggcagg taaaaagcct gaaaatctcg
      361 gtttgatgct ttaaattccg cgtgaaaaag agtacattcc cacccattgc ccaaaattta
      421 cggaacacat catggataaa tttcccaagt ctgcaaagct cgatcacgtc tgttacgaca
      481 tacgcgggcc ggttcacaaa aaagcccttc agttggaaga ggagggcaat aaaatcctta
      541 aactcaatat cggcaaccct gcgccgttcg gctttgaagc ccctgatgaa atcttggtcg
      601 atgtcatccg caacctgccg acttcgcaag gctattgcga ttctaaaggg ctgtattccg
      661 cccgcaaagc cattgttcac tactatcaga ccaaaggttt gcgcgatatt acggttgatg
      721 atgtctatat cggcaacggc gtgtccgagc tgattacgat gtctatgcag gcattgctca
      781 acgacggcga cgaaatcctg attcccgcgc ccgactaccc tttgtggacg gcggcggcaa
      841 cgcttgcggg cggtacggta cgccattatc tgtgcgacga agaaaacggc tggttcccca
      901 accttgccga tatggaagcc aaaatcacgc ccaaaaccaa agccatcgtc gtcatcaatc
      961 ccaataatcc gacaggcgcg gtgtacagca gggaaatcct gttggaaatc gccgaactgg
     1021 cgcgcaagca cggtttgatt attttcgccg acgagattta cgataaaatc ctttatgacg
     1081 gcgcggttca ccaccacatc gccgcgcttg cccccgacct tttgacggta acgttcaacg
     1141 gtttgtccaa atcctaccgc gtcgccggct tccgccaagg ctggatggtg ctcaacgggc
     1201 cgaaacatca cgcaaaaggt tacatcgagg gtttggatat gctctcgtct atgcgcctgt
     1261 gtgccaatac gccgatgcag cacgcgattc agacggcatt gggcggctat cagagcatca
     1321 acgaatttat tttgcccggc gggcggcttt tggaacagcg caacagggcg tgggaactgg
     1381 tcagccaaat ccccggcgtg tcctgcgtca aaccgatggg cgcgatgtat atgttcccaa
     1441 aaatcgatac cgaaatgtac cgtatccacg atgacatgaa attcgtttac gatttgctgg
     1501 tgcgcgaaaa agtcttgctg gtacagggaa cggggtttaa ttggattaaa cctgaccatt
     1561 tccgcattgt cacgctgcct tacgtccatc agattgaaga ggcgatgggc aggttggcaa
     1621 gattcctgca aacctaccgc caataagggg acggtttgtc tgccgaggat aaaaaatgcc
     1681 gtctgaaacg gagattcccg tttcagacgg cattttcaac agcaggaacg aatcaggcaa
     1741 atttcagtct gtcgccgtcg gcttctaccc tgatttcgct ttcgggcgca tagtttccgg
     1801 caagcagggc ttttgccagc gggttttcga tttccgactg gatggcgcgt ttgagcggac
     1861 gtgcgccgta aatcgggtcg aaaccggctt tggcgatgat gtccagtgcg gcatcggaaa
     1921 cagtcaggcg caggttttgt ttttccaaac gtttttccaa acctttgagc tggattttcg
     1981 caatgctgcg gatgtttgcc tgatccaaac cgtggaacac gaccacttcg tcgatgcggt
     2041 tgatcatttc aggacggaaa tgttctttca catcctccat cacaacttct tttaccgctt
     2101 cgtaatcctg aatgcccatt tgttggatgt gctggctgcc gatgttggaa gtcatcacaa
     2161 tcacggtatt tttaaaatct accgtcctgc cttgcccgtc ggtcaaacga ccgtcatcca
     2221 atacttgcag caggatgttg aacacatcgg gatgggcttt ttccacttcg tccagcagaa
     2281 tcacgctgta cggtttgcgg cgcacttgtt cggtcaggta gccgccttct tcgtagccga
     2341 catagcccgg aggcgcaccg atcaggcgtg caacggcgtg tttttccata tattcggaca
     2401 tatcgatgcg aatcagatga tcttcgctgt cgaacagaaa gcctgccagg gctttacaca
     2461 actcggtttt acccacgccg gtcgggccca agaacaggaa gctgccgtaa ggcttgttcg
     2521 gatcggcaag accggagcgg ctgcggcgga tagcgtcgga cacggcacgc acggcttcgt
     2581 cctgtccgac cacgcggcgg tgcaatactt cttccatttt cagcagtttg tcgcgttcgc
     2641 cttccatcat tttggatacg ggaatgccgg tcatacggga aaccacctct gcgatttcct
     2701 ctgcgccgac attattacgc aagagtttgt ttgccggttt tgtgctgtcc gtatctgccc
     2761 gttcggcggc tgcacgctgt ttttccaaat gctccaaatc ttcatacatc aattttgaag
     2821 ccagtgccaa atcgccttgc cgttttgcct gttcgatttt aattttgact tcgtcaattt
     2881 gtttcttaat attagcagca ccgtctgaaa ttgctttttc ggctttccag atttcgtcta
     2941 aatcggcgta ttctttttgc agaccgttga tttcctcgtc tatcagttcc aaacgttttt
     3001 tgctggcatc gtctttttct ttttcaacgt gcgccttttc catccgaagc tgaattagac
     3061 ggcggtcgat tttgtccatt gcttccggct tggtttcttt ttccatcttg acacggctgg
     3121 cggcttcgtc aatcaaatca atcgctttat cgggcaggaa gcggtcggtg atgtagcggt
     3181 cgctcaactc cgctgcggca acgatagcag ggtcggtaat atcgataccg tggtggattt
     3241 cataacgctc ctgcaaaccg cgcaagatgg cgatggtgtc ttccacgctg ggctcgccaa
     3301 ccaatacttt ttggaaacgg cgttcgagtg ccgcgtcttt ttcgatgtat tggcggtatt
     3361 cgtccaaggt ggtcgcaccg atacagtgca gttcgccgcg tgccaaagcc ggtttcaaca
     3421 tattgcccgc gtccatcgcg ccgtcggttt tacctgcgcc aaccaaggta tgaatttcgt
     3481 cgatgaaaat cagagtgttg ccatcgtctt tcgccaagtc gttcaacacg cctttcaagc
     3541 gttcttcaaa ttcgccgcga tatttcgcgc cggcaatcaa agccgccaag tccagaacca
     3601 gcaggcgttt gttgcgcagg gattcaggca cttcgccgtt gacgatacgt tgcgccaagc
     3661 cttcaacaat agcggtttta cccacacccg gctcaccaat cagcacgggg ttgtttttgg
     3721 tacggcgttg caatacctga atcgcgcggc ggatttcatc atcacggccg ataacggggt
     3781 caagtttgcc gtcgcgggcg cgctgggtca gatcaagtgt gtattttttc aaagcatcgc
     3841 gttggtcttc ggcattcgca tcattcacgt tttgtcctcc tcgtaccgca tcaatcgcgg
     3901 cattaatgtt ttgttcggtc gcaccggctt ctttcaaaat tttgccggtt gcatcgttct
     3961 gctgcaccaa ggcaagcagg aaaagttcgc tggcgatata gacatcgccg cgcttggttg
     4021 cggctttgtc catcaagttc aatacagctt gcagctcacg gctaggcata atatcgccgc
     4081 cctggccgga cactttcggc aggctgctca aatgctgctg caaacgctgt ttcacctgcg
     4141 gcacgttcac gcccgaatgc gccagcaacg cggcggcacc gctgttttgg tcgtcaagca
     4201 gggcttttaa cacaaagcct gcttccagat agctgccgtc cgcagccaac gccaaactct
     4261 gagcttctgc aagggcttgt tggaatttgg cggttaattt gtcgtatcgc atttttgttt
     4321 ccttttcaaa atgtccgctg tcgaagccta tatgtgcata attgtggata actcaagttc
     4381 tgttttctgt ttttctatat ttaattcgat atatcattga atttaaagta tataaaaatg
     4441 tataataatg tgtataacta tatcttctta atatggaaaa gtctgttgtc ggctggatgt
     4501 aggtggcaaa tcgggtataa tcggcacatc tttttccctt tcagacggca ttgatgccgc
     4561 aaggacattt tatgagcaaa aaacgagttc tgaccggcgt aaccaccacc ggcatcccgc
     4621 atctgggcaa ctacgtcggt gctatccgcc ccgccgtccg cgcggcgcaa aaccctgata
     4681 ccgaatcctt cctcttcctc gccgattacc acggtatcat caaatgccac gagccggaga
     4741 tgattcacca atccacccaa gccgttgccg ccacttggct tgcctgcgga ctcgaccccg
     4801 agcgcaccac cttctaccgc caaagcgaca ttcccgaagt gatggaattg aactggattc
     4861 tgacctgcat caccgccaag ggtttgatga accgagccca cgcctacaaa gccgccgtgc
     4921 aggcaaattc agaaaacaat caggaagatc ccgatttcgg cgtggaaatg ggtttgttca
     4981 gctatccgat tctgatgacc gccgacatcc ttatgttcaa cgccaacgaa gtgcccgtcg
     5041 ggcgcgacca aatccaacac gtcgaaatgg cgcgcgacat cgccggccgc ttcaaccacc
     5101 gctttaaaga aatctttacc ctgcccgaag tgaaaatcga tgaaaacgtc gaactcttgg
     5161 tcggtttgga cggacgcaaa atgtccaaat cctacggcaa caccattccg ctttgggaaa
     5221 acgacaaaaa aacccaaaaa tcggtcaaca aaatcatcac caatatgaaa gagccgggcg
     5281 agccgaaaca gcccgacgaa agcccattgt ttgaaatcta caaagccttc tccacgccgt
     5341 ctgaaaccgc agcgttcacg caaatgcttg ccgaaggctt ggcttggggc gaggcaaaaa
     5401 aacttttggc ggcgaaaatc aacgccgaac tcgccgaacc gcgcgaacgc tacaacgagc
     5461 tgaccgccga cccttcgcaa atcgaagaga ttttgcaggc aggcgcggcg aaagcgcgta
     5521 aagaagcacg cgaattgttg gacaaagtac gcgatgcggt cggcatccgc ccgttgaaat
     5581 aaatccatgc cgtctgaaca tccattgtcc gtgtttcaga cggcattttg aaaccatcag
     5641 gagtgtggaa tgctgaaaac atcttttgcc gtattgggcg gctgcctgct gcttgccgcc
     5701 tgcggcaaat ccgaaaatac ggcggaacag ccgcaaaacg cggtacaaag cgcgccgaaa
     5761 ccggttttca aagtcaaata tatcgacaat acggcgattg ccggtttgga tttgggacaa
     5821 agcagcgaag gcaaaaccaa cgacggcaaa aaacaaatca gttatccgat taaaggcttg
     5881 ccggaacaaa acgtcgtccg gctgaccggc aaacatacca acgacttgga agccgtcgtc
     5941 ggcaaatgta tggaaaccga cggaaagggc gcgccttcgg gctgggcggc aaacggcgtg
     6001 tgccatacct tgtttgccaa actggtgggc aatatcgccg aagacggcgg caaactgacg
     6061 gattacctga tttcgcattc cgccctgcaa ccctatcagg caggcaaaag cggctatgcc
     6121 gccgtgcaga acggacgcta tgtgctggaa atcgacagcg aaggggcgtt ttatttccgc
     6181 cgccgccatt attgaggtat tcggacatcc cggaatatat ttgggttttt caaaccctgc
     6241 aggaaaaagt ccgcaccgtc gggaaactca aaaggagggg gatatgtgtt acaattttcc
     6301 gaactgtttt cataaaatag ttttcggacg tgtttcaata tggcattgat gccgccttat
     6361 tgttcgagaa aaaaccttta tatttaaata taatgggttt taactaaacg ggaaaccgtt
     6421 ttctctccgg ccgatgggca aaatcagccg attgatggaa cacggtccga tttttaagca
     6481 aaaccttaat caacaactca agaaggataa gacatgaaaa aattattgat tgccgcaatg
     6541 atggcggctg ccttggcagc ttgttcgcaa gaagccaaac aggaggttaa ggaagcggtt
     6601 caagccgttg agtccgatgt taaagacact gcggcttctg ccgccgagtc tgccgcttct
     6661 gccgtcgaag aagcgaaaga ccaagtcaaa gatgctgcgg ctgatgcaaa ggcaagtgcc
     6721 gaggaagctg taactgaagc caaagaagct gtaactgaag cagctaaaga tactttgaac
     6781 aaagctgccg acgcgactca ggaagcggca gacaaaatga aagatgccgc caaataattt
     6841 gttgccttgg caaaaatgat gggatgccgc ctgccggcaa cccaaacgaa accgcctgaa
     6901 gattttcagg cggtttttga gttgtatgcc ccttgttttt tacgcctgca tgaccgttcc
     6961 gagcagatgt gccgcgcata tcgggatgtt gcggacaggc aaatgccgtc tggacagggt
     7021 ttggacggca tttgttccgt aaggttcaga cgacctcgac tttaaacggc atattgattt
     7081 tttgccattg gacgctttca tattccaatg cgtcggcaat caggggatgg cgttccagcc
     7141 attccctgtc aatacgcagg atgaagccgc agctttccgt atccgtgcgc aactgcatat
     7201 ttttcgggaa agacaggtct tggcgcgaac ggcagaacag ggcagcaagg cgcagggaca
     7261 aaacggcata ccacaacatt tcgttggtgc cgatgatgcc gctcattttt ttcatatcgc
     7321 cgcgatgacc gatgaccagt tgggcaagta tggtctgttc tttgcgtgag aaacccggca
     7381 tatcggcgtt ttcgaggatg taggcggaat gcttgtgata gccggtgtgg gcgatgtcca
     7441 aaccgatttc gtgcagcgcg gcggcgcgtc cgagatactg ttgccacaag gcaagctctt
     7501 gaactgtaac gtttttagcg tggcagaggc tgtccataaa ggtttgcgcg gtctcggcgg
     7561 tgcgtttcgc ctgattgagg ctgacgtggt agcggtgttg gaactcggca accgtttgtc
     7621 cgcgcatatc ttcgtttaaa ccgcgcccga tcaaatcgta aaacacgccg tcgcgcaggg
     7681 cggcttcggt tacggtcatc ctgtcgagtt tcatttcctc aaacgccgcc atcatcacgg
     7741 caagtccgcc ggcaaaaact tcgatgcgtt ccggtttcag gttttcaaat ttggcttttt
     7801 tgaccgaacc ggcttcgatg atgcgttcgg agagggcgcg catacctttg taggtaatgt
     7861 ccgcctcttg gggcatttcg gcggcaagca cgtcgcggat ggattttgcc gaacccgatg
     7921 tgccgacggc gaaatcccag ccttcgcgcc tcatattttt gctgatgcgc tggatttcgt
     7981 tgcgggcggc ggaaatggcg gcttggaagt ctttggcggt gattttgttt tggaagaagc
     8041 gcaggctgta ggtaacgcag cccaagggca ggctttcggt aatgtcggga ttcagcgtcg
     8101 aaccgatgac aaattctgtc gaaccgcccc cgatgtcgat aaccagcatt ttgccgccgc
     8161 ccggggggag ggtgtggatc acgccggtat aaatcagccg cgcctcttcg cgcccggcga
     8221 tgatttcgat ggggaaaccc agtgccgctt cggctttggg aaggaaatct gcgatgtttt
     8281 tggcgacacg gaatgtattg gttgccacgg cgcgtacctg ttcagggcgg aagccgcgca
     8341 ggcgttcgcc gaattttgcc agacagtcca aagcctgttc ttgggaagcg gcactcaggt
     8401 ttttctgttc gtccagaccg gcggcgaagc gcaccatctg tttgaacgaa tcgataactt
     8461 tcaactgtcc gttgttgttt tcgcaaatct ggaggcggaa actgttggaa cccaaatcga
     8521 cggaggcgag gatgtttgcg ggggtggtgg tcatggcgga tatcggtggg ggaaaaacgc
     8581 aatgttactc tgacggcgca ggcgttgaca ataaatgatg cggctgtttt tgattctgct
     8641 cgcggatgtt gccgacggca ttttttgcgc ttatttgaaa tccttttcca cgctcatgaa
     8701 aatctgcatg tttttgcgtg tgtaaaaact tttcatattg ctgtcgattt tcagatagcg
     8761 gaaattgagt tgcggcgtaa agcccttcca agagattttg tcgtgccaca acgacaggtt
     8821 tgcctgatat tcgtggtctt tgcgcgggaa gcggtacaca agggtcccgg gtgcatcaaa
     8881 agtcctgcgg gtgtagcgca ggtttgcccg cagacccaag ccgccgtcga acgttttgac
     8941 cgctccgaca cgcaaaccct tgcggatgga agcctgttcc gcctccttcg tcaagtcgtg
     9001 cgaccagtcc gcaccgccgt aaagcagcca gtctttcggc gcggaataca tcagcgtcgc
     9061 gcccgccagc ggcatatggc tgtcgtatcg ggcggcggtg cggtcttcct gataacgctt
     9121 ccacatattg cccacgttca gcgtcagccg ccagcgttcg ctcaagcgtc gggagaaatc
     9181 ggcattgaag ccgccgacga aattgtatcg gctgccgcct aagaggtttt gcccgataaa
     9241 cggcacgatg ccgaacgagc gcgttaccga acgattttta tagccgagcg acaggcgcag
     9301 gcactgttcg ctgaaatctt tgttatccca ataatgcacg ccgccgccgc tgatgccgcc
     9361 gtagaggaaa tgatgcccgc ccgcattgat ttcgcgcgac acgcctaagc cctagcgcaa
     9421 accgtgtgcc ttttgcggca ggctgtcggc ggttttcgtc cagcttctgc ccgcaaattc
     9481 aatcgttttt ttggacgaag cgttgtttat ag
//
LOCUS       DAWEYF010000071         9419 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.071, whole genome shotgun sequence.
ACCESSION   DAWEYF010000071 DAWEYF010000000
VERSION     DAWEYF010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9419
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.071"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(115..1557)
                     /gene="aldA"
                     /locus_tag="WGN93_001201"
     CDS             complement(115..1557)
                     /gene="aldA"
                     /locus_tag="WGN93_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ0227107.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRGRADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVST
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1592..1792)
                     /locus_tag="WGN93_001202"
     CDS             complement(1592..1792)
                     /locus_tag="WGN93_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227108.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTDANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(1801..2190)
                     /locus_tag="WGN93_001203"
     CDS             complement(1801..2190)
                     /locus_tag="WGN93_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227109.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTADRISVSFIREIQAA"
     gene            complement(2398..3315)
                     /locus_tag="WGN93_001204"
     CDS             complement(2398..3315)
                     /locus_tag="WGN93_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0227110.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRCRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWDLPPNLRGLAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFAGGA
                     HQVNRLTDALNISERTLQRRMRDHFGITTSEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3488..4288
                     /locus_tag="WGN93_001205"
     CDS             3488..4288
                     /locus_tag="WGN93_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227111.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4336..5112
                     /gene="mlaE"
                     /locus_tag="WGN93_001206"
     CDS             4336..5112
                     /gene="mlaE"
                     /locus_tag="WGN93_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ0227112.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5163..5657
                     /gene="mlaD"
                     /locus_tag="WGN93_001207"
     CDS             5163..5657
                     /gene="mlaD"
                     /locus_tag="WGN93_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ0227113.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5694..6284
                     /locus_tag="WGN93_001208"
     CDS             5694..6284
                     /locus_tag="WGN93_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ0227114.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6341..6619
                     /locus_tag="WGN93_001209"
     CDS             6341..6619
                     /locus_tag="WGN93_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ0227115.1"
                     /translation="MHTELNNGTLHISGDVTVKTLTAAAFTRFRQQCRLKDTRAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6616..7443
                     /locus_tag="WGN93_001210"
     CDS             6616..7443
                     /locus_tag="WGN93_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ0227116.1"
                     /translation="MKKTAYAALLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7568..7930
                     /locus_tag="WGN93_001211"
     CDS             7568..7930
                     /locus_tag="WGN93_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ0227117.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7927..8313
                     /locus_tag="WGN93_001212"
     CDS             7927..8313
                     /locus_tag="WGN93_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ0227118.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8310..8798
                     /locus_tag="WGN93_001213"
     CDS             8310..8798
                     /locus_tag="WGN93_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ0227119.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKMANYYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8881..9048)
                     /locus_tag="WGN93_001214"
     CDS             complement(8881..9048)
                     /locus_tag="WGN93_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ0227120.1"
                     /translation="MEDDVWPGHRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9015..9395)
                     /locus_tag="WGN93_001215"
     CDS             complement(9015..9395)
                     /locus_tag="WGN93_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ0227121.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
BASE COUNT         2177 a         2624 c         2372 g         2246 t
ORIGIN      
        1 aaagacaaaa acatcgatgt cggtcatgac tgattgccgg tgaaactgta aaaatgccgt
       61 ctgaacctga aaacgggttc agacggcatt ttctatcggg gttttaaagc ggcattaaat
      121 gtcggtttcc aaataaacga cttgggtttg cagatattct tccaaaccgt gtttgccgtc
      181 cgcgccgccg ataccggatt ttttccaacc ggcgtggaaa ccctgcatcg cttcaaagtt
      241 ttcgcggttg atgtaggttt cgccgaattg caggcggcgg gtaacgtaga aggcttcgtt
      301 taaattagtc gtataaacag aactggtcag accaaactcg caatcgttag ccagtgcgat
      361 gacttggtcg agcgtgtcga aagtggaaac aggcaggacg gggccgaagg tttcttcttt
      421 cataatgtcc atactgttgt cggtgtcggt cagcagggtc ggctcgaaga aatagccgcg
      481 tccttcggcg cgtttgccgc cgcaaaccaa tttcgcacct tgtttgactg cccgttccac
      541 tttttcggca acggctttga cggcgcgctc ttcaatcagc gggcccattt ccagcgcgcc
      601 ggcttcggct tcggcagggt tgccgtagcg cacgcctttc atcgcggcgg tcattttttc
      661 gataaacgcg tctttcaggc tgctgtggac atagacgcgc tcggcgcagt tgcagatttg
      721 accagtgttg ccgacgcgcg aagccaagat ggatttcacc gccaaatcca aatccgcgtc
      781 tttcaaaacg atggcggggg ctttgccgcc gagttccagc gaaactttgg tgatgttggc
      841 ggaagcggct tccatcactt ggcggcctgc ttcgacggag ccggtcaggc tgaccatatc
      901 gacttgcgga tgggcagaca aggcattgcc gatttccgca cccggaccgt tcaccacgtt
      961 gaacacgcct gcgggcaatc cgaccgcatc gacgatttcg gcgaagatgt ggcagttgat
     1021 cggggttacg ctgctgggtt tgacaacgat ggtgttgccc gttactaagg cgggacccat
     1081 tttgcgggca atcaggaaga aagggaagtt ccacggcaaa atgccggcaa ttacgcccag
     1141 cggacgtttg aacaataaaa tattttcacg cgggcggtcg ctttggatga tttcgccttc
     1201 gtaacggcgc gcccattcgg cttggtaatc gagatagtcg gcggtgaaca tcacttctac
     1261 gcgcgccaag tctttggttt tgccgccttc ggcaacgatg gtgtcggtca gctcgtcggc
     1321 gcgtccgcgt atgccttggg cgattttgcg caaatacgcg ccgcgttcga ccgcaggcag
     1381 gcgttcccaa gccggttgcg ccgcgcgtgc cgccgccaca gctcggtcaa cgtctgcttt
     1441 tccgcctttg ggttcgcggg cgatggtttc ttcggtggaa gggttcaata cgtcgcgcca
     1501 ttcgccgttg aagtcgtttt caaagcgtcc gttgatgtac atggccaatt gtttcatttc
     1561 gggttctcca gttttgtagt cagatgtagt tttagtttat tcccaaataa attaccgtac
     1621 aagtttcttt tgaaatgttt agacgagaag ctactatgtc tgcatattgt tctgctaatt
     1681 tatattcact cgaatgcaac tgccgattat tccaatctgc attcgcatca gtaaaagccc
     1741 cagcattgcc gcctgtggca taaccaatcg ctaaactgcc aacggtatcc acaacaggtt
     1801 tcaggctgcc tgaatttctc taataaatga aacacttatt ctatcagccg ttaatgtaac
     1861 caaacaatta tcaagataag agtagtttat taaatactca tcttcttcaa attgtatatt
     1921 ttgtagggtt agatgattat tttttaattc tgccgttatt tcatacttga aactatcatc
     1981 tatttttcta aatccaatat ttgaagttga tttatccagt atgtaatcat taaagatttc
     2041 ataggataat tccacttcat aaaattgatt ttcaaatatt ttgaatgggc agtacgatat
     2101 aaaacaatgt agttcataac catttatttc aatcaatact gcctcttcaa tggtgttatc
     2161 taactttttg attttacatt tatataacat ttatcttgcc tttggataaa ttgttttgtt
     2221 ttttggattg ttattcaaag ttctccaaaa gtcttttcct gattttgtat gtatcgtggt
     2281 aatactacca ttttcattgg ttccaacaaa aataaattta gattgacctt tggaatcagt
     2341 acccaaaaac tgaacatatc cagacacgcg gatttcgggt tttaaatcaa atgcggctta
     2401 ccggttttct tttttggttt ccgcaggcgt gctgccgaaa tattgcctga atgcctgagt
     2461 aaagctggaa acgtggcggt agccgcataa atatgcggtt tcgcctatgc ttttgccccc
     2521 gttttgcaac agataaagcg cgtgctgcat ttgtttgtgg tgcagccact cgcttgtggt
     2581 aatgccgaaa tggtcgcgca tacggcgttg cagcgtcctt tcgctgatgt tcagcgcgtc
     2641 tgtcagccgg ttgacttggt gtgcgccgcc ggcaaacgcg gcattcaggg tgcggctgaa
     2701 gtcttcagac ggcatagcgt ctgcttccgc cgtttgcccc gccgccggcc cgatgccgtc
     2761 tgaaaccgtg tcccacaagt ccgacagcag ccgcaacacg tccgcctcgc ggcgcaatgt
     2821 ttcgcccaaa tgcccctttg ggacggcttt caggcaggat gccgccaagc cgcgcaggtt
     2881 cgggggcaaa tcccatatcc tgaccggttc gcggtaaagc aggggtgcga aacgcgcgta
     2941 ttccggacgc agcagccatt gttccatacc tttaatggtc attttgaccg ttttgccgcc
     3001 tcggtaaaga tagcggctga acaggacttc ttccccgaca gcaattagga caatcttgcc
     3061 gccgtccgca tcgatttgga agcggcagcg gttgatgccg aagtccaaac tgccttccag
     3121 caagagcacg aacgacacat aaggttcggc gaggcggctg ctgcaaaaat cacaccgtgc
     3181 cgttactgtg ccgccgtgga tggaaatgcc gttggacaaa gtatcgaaac ggtagctgcc
     3241 ctccacatag ctgccgccgc cgcttttgac tagattgacg aaccggctgc tgttcaaatg
     3301 ttctgctttt tccatagttt tctgataaag gttatcattt gaaagataac atttttcgcc
     3361 acagcaaaca atccgccgcc gacaacggca ttttcacaac atttaccgtc cgtatgccgt
     3421 ctgaaaattg cccgtcttcc cgataagcct taaaatacac gccgtcaaac ctaccgtccg
     3481 tccgtacatg agcccatccc cctttatcga aatgaaagac gtcgccttcg cgtatggcga
     3541 ccgcccgatt ctgaagaaca tcaatttcag cattccgcaa ggcaattttg ctgccgtaat
     3601 gggcggttcg ggcagcggca aaaccacgct gatgcgactg attacaggac agattcgtcc
     3661 gcagtccggg caggttttga ttgaaggacg ggatttggcg ggcttttcgg ctgacgagtt
     3721 gtatgaacac cgccgccgta tgggcgtatt gttccaacac ggcgcgctgt ttactgattt
     3781 gtcggtattc gacaatatcg cttttccgat gcgcgaactg acgcgcctgc cggaagcggt
     3841 gattcgggat ttggttttgt tgaaattgaa cgcggtcggt ctgcgcggtg tggaaaacct
     3901 gatgccgtcc gagttgtccg gcgggatgtc gcgccgcgtc gcgcttgccc gcacgattgc
     3961 gctcgaccct gaaattatgt tgtacgacga gccgtttacc ggcctcgatc cgatttcctt
     4021 gggcgtgatt gcccacttga tcagccgcgt caacaaggct ttgcgttcga ccagtattat
     4081 ggtaacgcac gacattgaaa aatctttgga aatcgtcgat caggtgattt tcttggcgca
     4141 cggcgaaatt atgttctccg gctcgccgca ggaaatgcgc gaactggatt cgccttgggt
     4201 gcgccagttt gtcggcgggc tggcagacgg ccccgtagca taccgttatc cggcgcaaac
     4261 gtcgttgcag caggacctgt tgggataaat gagttgatgc cgtctgaaac cgttgaactt
     4321 tacacataga aatttatgaa ctttatccgt tccgtcgggg cgaaaaccct cggccttatt
     4381 caatccctcg gcagtatcac gctgtttctg ctgaacattc tggcgaagtc cggtacggct
     4441 ttcgtccgtc cgcgcctgag cgtgcgccaa gtgtatttcg ccggtgtgct gtcggtgttg
     4501 attgttgccg tttcggggct gtttgtcggc atggtcttgg gtttacaggg ctatacgcag
     4561 ttgtcgaaat tcaaatccgc cgatattttg ggctatatgg tcgcggcttc gctattgcgc
     4621 gagctgggtc cggtattggc agcgattttg tttgccagca gcgcgggcgg tgcgatgacc
     4681 agcgaaatcg gtctgatgaa aacgaccgaa cagctcgaag cgatgaatgt gatggcggta
     4741 aaccctgtcg cccgcgtggt tgcgccgcgc ttttgggcgg gcgtgttttc catgccgctt
     4801 ttggcttcga ttttcaacgt ggcgggcatt ttcggtgcgt atttggtcgg tgtaagctgg
     4861 ctgggcttgg acagcggcat tttctggtcg caaatgcaga acaacatcac gatacattac
     4921 gatgtaatca acggtctgat caaatccgcc gcgttcggcg tggcggtaac gctgattgcc
     4981 gtgcatcagg gcttccactg cgtcccgacc tcggaaggca ttttgcgcgc cagcacgcgc
     5041 acggtggttt cgtccgccct gacgattttg gcggtcgatt ttatattgac cgcgtggatg
     5101 tttacagatt gacagggcgt ctgaagacga aacgcggaac atcggatatt caaggaactt
     5161 taatgaaaaa gaacatattg gaattttggg tcggactgtt cgtcctgatt ggcgcggcgg
     5221 cggttgcctt tctcgctttc cgcgtggcgg gcggcgcggc gttcggcaat tccggcaaga
     5281 cttataccgt atatgccgat ttcggcgaca tcggcggttt gaaggtcaat gcccccgtca
     5341 aatccgcagg cgtattggtc gggcgcgtcg gcgctatcgg acttgacccg aaatcctatc
     5401 aggcgagggt gcgcctcgat ttggacggca agtatcagtt cagcagcgac gtttccgcgc
     5461 aaatcctgac ttcgggactt ttgggcgagc agtacatcgg gctgcagcag ggcggcgaca
     5521 cggaaaacct tgctgccggc gacaccatct ccgtaaccag ttctgcaatg gttttggaaa
     5581 accttatcgg caaattcatg acgagttttg ccgagaaaaa tgccgacggc ggcaatgcgg
     5641 aaaaagccgc cgaataaacg tatgccatca tattcaaact aggacactta atcatgaaaa
     5701 aatcctccct catcagcgca ttgggcatcg gtattttgag catcggcatg gcatttgccg
     5761 cccctgccga cgcggtaaac caaatccgtc aaaacgccac tcaagtattg agcatcttaa
     5821 aaagcggtga tgccaacacc gcccgccaaa aagccgaagc ctatgcgatt ccctatttcg
     5881 atttccaacg tatgaccgca ttggcggtcg gcaacccttg gcgcaccgcg tccgacgcgc
     5941 aaaaacaagc gttggccaaa gaatttcaaa ccctgctgat ccgcacctat tccggcacga
     6001 tgctgaaatt aaaaaacgcc aacgtcaacg tcaaagacaa tcccatcgtc aataaaggcg
     6061 gcaaagaaat catcgtccgc gccgaagtcg gcgtacctgg gcaaaaaccc gtcaacatgg
     6121 acttcaccac ctaccaaagc ggcggtaaat accgtaccta caacgtcgcc atcgaaggcg
     6181 cgagcctggt taccgtgtac cgcaaccaat tcggcgaaat catcaaagcg aaaggcgtgg
     6241 acggactgat tgccgagttg aaggctaaaa acggcagcaa gtaatccata agccatgccg
     6301 ccagactgaa gatggcatgg atttttccct accgaacact atgcatacag aactcaacaa
     6361 cggaacactg cacatcagcg gcgacgtaac cgtcaaaacc ctgactgccg ccgcctttac
     6421 ccgcttcaga cagcaatgtc gtctgaaaga cacccgcgcg gttgatttga gcggcgtcgg
     6481 acgcgccgat tccgcctgcg tgtcgctgct gctcgaagtg ctgcgcggtt gcaaaggcag
     6541 cgtcaggctg accggcattc ccgaatccgt gcgcgcgctg tccgaactgt acgaaatcaa
     6601 agactggttg aaatcatgaa aaaaaccgcc tacgccgccc tcctgctgat cgggttcgct
     6661 tccgcccctg catttgcaga aacccgcccc gccgaccctt atgaaggcta caaccgcgcc
     6721 gttttcaaat tcaacgacca agccgaccgc tacattttcg cccctgccgc gcgcggctac
     6781 cgcaaagttg cgccgaaacc cgtccgcgcc ggcgtgtcca atttttttaa caacctgtgc
     6841 gacgtggtca gcttcggcag caatatcttg cgcttggaca tcaaacgcgc aagcgaagac
     6901 cttgtccgcg tcggcatcaa caccactttc ggtttgggcg ggcttatcga catcgccggc
     6961 gcgggcggca ttcccgacaa taaaaacacc ttgggcgaca cgtttgcttc gtggggatgg
     7021 aaaaacagca attatttcgt gttgcccgtc ttagggccgt ccaccgtccg cgacgcgctc
     7081 ggcacgggta ttacctccgt ttattcgccc aagaatatcg tcttccgcac ccctgtcgga
     7141 cgctggggca cgactgccgt atccgccgtc agtacgcgcg aaggtctgct cgatttgacc
     7201 gacagtctgg acgaagccgc catcgacaaa tacagctaca cgcgcgacct ctatatgaaa
     7261 gtccgtgcgc ggcagaccgg tgcaacacct gccgaaggta cggaagataa catcgacatc
     7321 gacgaattgg tcgaaagtgc cgaaaccggc gcggcggaaa ctgccgttca agaagattcc
     7381 gtatccgaaa cacaggcaga agcagcaggg gaagccgaaa cgcaacctgg aacacaacct
     7441 taaagccatg ccgtctgaaa atccgtgttc ggacgacatt cccttctgtc ggaacggaca
     7501 gtccgaaacc acagattggg ctataatctc ttttttgcgc ataccgcgcg acagcaaagg
     7561 aaaaaccatg tacgaagtca accgcagcgt attcgtcctc atccctttag aacctttttg
     7621 gaactggctg caaaccctgc cgggcaacca cctcgacgga ctgactcttg aagacatcca
     7681 agccgacgcc aattcctacc ttgtccgccc gtgcgaaacc gccgacgaag tatgggacga
     7741 aatcgaagcc cgttttgaag acattttcgc cgccgaactt gccgactggt gcgaagacga
     7801 acgcgagtgg cctgcgctcg atgccgacat tttcaacgaa tggttcgaca tccagctttc
     7861 taccgtcatc accgacctcg aacacgaacc gcttgcccgc gaagccttcc aacccatcaa
     7921 cctgaactga tgaagctgac cgtccgcaac taccatctcg acggctacgg ccatgtcaac
     7981 aatgcgcgct acctcgaatt tttcgaagaa gcgcgctggg cgttttttga agaacgcgga
     8041 ctgctgcacg agttggcagg cctcatactg attgtcgccc gcatcgacat ccgatacagc
     8101 cgccccgccg tcgaaggcga cgtattgcag ttttcatgcc gcctgaaaac ccccggcacg
     8161 cgccgtattg tgctgaccca gacgattaca ctgccaaacg gcaaaaccgc cgcagaagcc
     8221 gacatcaccc tgatgcccgt ccacgccgcc acacaacgca ccgtcagcct gcccgccacc
     8281 cttgcccgcg cattggaagc cttgtccgaa tgaaaaaaat actcaccgcc gccgtcgtcg
     8341 cactgatcgg catcctcctt gccatcgtcc tcatccccga cagcaaaacc gcgcccgcct
     8401 tctccctgcc cgacctgcac ggaaaaaccg tttccaacgc cgacctgcaa ggcaaagtaa
     8461 ccctgattaa tttttggttt ccctcctgtc cgggttgtgt gagcgaaatg cccaaaatca
     8521 ttaaaatggc aaattactat aaaaacaaaa acttccaagt ccttgccgtt gcacaaccta
     8581 tcgatccgat agaaagcgtc cgccaatatg tcaaagacta cggtttgccg tttaccgtca
     8641 tgtatgatgc ggacaaagct gtcggacagg cgttcggcac acaggtttat ccgacttccg
     8701 tccttatcgg caaaaaaggc gaaatcctca aaacttatgt cggcgaaccc gatttcggca
     8761 aactctacca agaaatcgat accgcgctgg cacaatagcg atgccgtctg aagcgcaaaa
     8821 aaaacagaaa cgatgttcct gttttttcag atcatccgcc ccgacacgtt cagacggcat
     8881 tcaaccttcc ggcagattct ttttcaccac tgccggattg cctgccgcca aagagtaggg
     8941 cggaatgtct tttgtaacca ccgcgcctgc gcccacgacc gaaccgcgtc cgacggttac
     9001 gcccgccatt acaatcaccc tgtgccccgg ccagacatcg tcctccaacg taatcggacg
     9061 gatttccgtg tagccctcaa agcgtttttt gaacggtcaa acttgtggtt atttgaataa
     9121 aacagacatt ccggctccat catcacattt ttgccgacca ccagcccacg gcagatttca
     9181 cagtttgccc cgatgcccga gccgtcgccc aaaaccgtat ccggaaacac atacgccccg
     9241 cgttcgatat tgaccccgcg tccgatatgc ggagaaaccc gccgcgccaa aaaaccgcgc
     9301 acccgtctgc cgacgatgcc gatgccgcgc atatgtgacg gcggcaaccc cgaaccggca
     9361 aaacgcagca gcaggaaaaa gaattttgat cccatcaaac ctccctcaaa agaactttt
//
LOCUS       DAWEYF010000072         9345 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.072, whole genome shotgun sequence.
ACCESSION   DAWEYF010000072 DAWEYF010000000
VERSION     DAWEYF010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9345
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.072"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..329
                     /locus_tag="WGN93_001216"
     CDS             <1..329
                     /locus_tag="WGN93_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ0227122.1"
                     /translation="IATTVPAQQTFLDAAELMQWSIETEGLGLNVISHKILGKDHAQV
                     EFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGK
                     YLKPVA"
     gene            complement(548..1342)
                     /locus_tag="WGN93_001217"
     CDS             complement(548..1342)
                     /locus_tag="WGN93_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ0227123.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSCRKEDGSMLSEADIAAQT
                     AFAAALPLLIDSPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
     gene            1446..2171
                     /locus_tag="WGN93_001218"
     CDS             1446..2171
                     /locus_tag="WGN93_001218"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ0227124.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFNGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGERMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
     gene            complement(3215..4057)
                     /locus_tag="WGN93_001219"
     CDS             complement(3215..4057)
                     /locus_tag="WGN93_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ0227125.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHGIPFQFFDALMPSEELNRM
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
     gene            complement(4099..4194)
                     /locus_tag="WGN93_001220"
     CDS             complement(4099..4194)
                     /locus_tag="WGN93_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ0227126.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILHRLLKNR"
     gene            complement(4206..5045)
                     /locus_tag="WGN93_001221"
     CDS             complement(4206..5045)
                     /locus_tag="WGN93_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ0227127.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHTVLWKQALDESLPYIAVFEDDVLLGEGAEKFLA
                     EDGWLKERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISR
                     KAMRFFLDRFAALPSEGLHPVDWMMFGNPDDREGMPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKHRLIRALTKISREREKRRQRREQLIGKIIV
                     PFQ"
     gene            complement(5087..6133)
                     /locus_tag="WGN93_001222"
     CDS             complement(5087..6133)
                     /locus_tag="WGN93_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ0227128.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLDILIVDDGSTDGTLAIARRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSG
                     MGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHG
                     KIWKKPTRPEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSK
                     LGRLAYYPEALVKYRLHANQVSSKYSIRQHEIAQGIQKTARNDFLQSMGFKTRFDSLE
                     YRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTPPAGAWLDFAADGRMRRLFTL
                     RQYFGILRRLLKNR"
     gene            complement(6150..8213)
                     /locus_tag="WGN93_001223"
     CDS             complement(6150..8213)
                     /locus_tag="WGN93_001223"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ0227129.1"
                     /translation="MTTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDVVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAAQMREQGKVVA
                     PFAERKAAIQTALERQARRLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALDADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            complement(8330..9226)
                     /gene="glyQ"
                     /locus_tag="WGN93_001224"
     CDS             complement(8330..9226)
                     /gene="glyQ"
                     /locus_tag="WGN93_001224"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ0227130.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAVEEASLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLIKK"
BASE COUNT         2150 a         2530 c         2378 g         2287 t
ORIGIN      
        1 tcatcgctac taccgttccg gcgcaacaaa cattcctcga tgccgccgaa ctgatgcaat
       61 ggagtataga aaccgaaggg ctgggcttga acgtcatctc gcacaagata ctcggcaaag
      121 accacgccca agtcgaattt gaagcctact tccgagacgg acaacaccga tccgcgcatc
      181 acgaactgtc cggcttcgtc aacatcggcg gacaatggta ttttatcgat cccaccgttc
      241 cgcatcctgc gatgaaacaa ccctgcattt gcggatcggg caaaaaattc aaagcctgct
      301 gcggcaaata tctgaaacct gtcgcataaa aatgccgtct gaacgttcag acggcatttt
      361 caacgtgcaa aaaaaaacca ttcataccaa gggtaagtat gaatggtcaa tacattgcgg
      421 gaaaacgtct tacttgctgc actgccgaaa agggagaaac ggcagcggta atcagcggaa
      481 atgattgtac ccgaattaat gttaagaaac gttaatcgcg aaaatatatt aacaaacctg
      541 ttgaaaccta ttggttttcc cgtatccacc cgacccagcg ttcaaacagc ttcggttcga
      601 gcgcggcaac gaccgagcgt ttgaacacgt gttcaccact ccaaaacccg tcgccttcca
      661 aagtcgtcag cctgccgccc gcctcctcga aaatcaacgc acccgcagca tagtcccaca
      721 gcttctgccc accgtgaaca taaacatcat aacgcccgca cgccagataa caccaatcca
      781 acgtactgct gcccatactc cgtatcgttc caaaaggcgc gagcgtactc atacggctgg
      841 aaagtttgcc cgaacgcaaa tatttgattt ccacgcccgc aatcgcctca ttgagttttt
      901 tatccacgag acgcaaaggc aggcgggttc cattaagaaa cgcaccctgc ccccgttcgg
      961 cataaaaaca ttcgccgctg accggattgt aaatcacacc caattcggcg cgcccgttgc
     1021 ggacaaacgc caccgacacg gcaaaatgcg gcagcccgtt gacaaaattg ttcgtcccgt
     1081 ctatcggatc gacaatccac agcccctttt cccccgaata ttgttcccac aaagccgact
     1141 gttcctgccg cgacatttcc tcgcccaaca tcggactgtc gattaaaagc ggcaacgcgg
     1201 cggcaaaagc cgtctgcgcg gcaatgtccg cctcgctcaa catcgaaccg tcttccttgc
     1261 ggcaagacgg cgtattcaaa aaacgcggca taatttcggt ttgcgcgata tggcgcacga
     1321 ctttctgcaa acggtgcaac acttcctact gtcctcatat tttgaacttg cggcgcgcaa
     1381 acgtataatg tccgtttcca tcacgccgct gcgacggatt ataaccgtcc gaaccgccaa
     1441 aaactatgcc ccgattctac ctgcccgaaa acctttccgt cggacaaacc gtcgccctgc
     1501 ccgacaacat cgtccgccac ctcaacgtcc tgcgcgtccg ccccaacgaa aacatcaccc
     1561 tcttcaacgg caaaggcaag gcacacgccg cacagctgac cgttttggaa aaacgccgcg
     1621 ccgaagccga aatcctgcac gaagacacaa ccgacaacga gtccccgctc aacatcacgc
     1681 tcatccaatc catatcttcc ggcgaacgta tggactttac cctgcaaaaa agcgtcgaac
     1741 tcggcgtaac cgccatacag cccgtcatca gcgaacgctg catcgtccgc ctcgacggag
     1801 aacgcgccgc caaacgcctc gcacgctggc aggaaatcgt catctccgcg tgcgaacaaa
     1861 gcggcaggaa caccgttccc cccgtgctgc ccatcatcgg ctatcgtgaa gcactcgaca
     1921 aaatgccgtc tgaaagcacc aagctgatta tgagcatcaa ccgcgcccgc aaactcggcg
     1981 acatccgcca cccgtccggc gcaatcgtct ttatggtcgg gcccgaaggc ggctggacag
     2041 aacaggaaga acaacaggca tttgaagccg gctttcaggc ggttacactc ggcaaacgga
     2101 ttttacgcac agaaaccgcc ccactcgccg ccctcgccgc catgcagacg ctttggggcg
     2161 atttcgcata aacagaaatg ccgtctgaaa cccgttcaga cggcattttg cagccgatta
     2221 agatagtagg ttcaaataag atttcccccg ccgtcattcc cgcgaaagca agaatctaga
     2281 aacgaaaaac tacagggatt tatccgaaac aacaaaccct ctccgccgtc attcccgcgc
     2341 aggcgggaat ctagaaattt aacgttgcgg tgatttatcg gaaatgactg aaactcaacg
     2401 gactggattc ccgcctgcgc gggaatgacg aattttaggt tgctgttttt tggttttctg
     2461 tttttgcggg aatgacgaat tttaggtttc tgtttttggt tttctgttct cgcgggaata
     2521 acggaatttt aagttttagg aatttgtcgg aaaaacagaa atcccgccgc cgtcattccc
     2581 gcgaaagcgg gaatctagaa acgaaaaact acagggattt atccgaaaca acaaaccctc
     2641 tccgccgtca ttcccgcaaa agcgggaatc tagaaattta acgttgcggt gatttatcgg
     2701 aaatgactga acctcaacgg actggattcc cgcctgcgcg ggaatgacga attttaggtt
     2761 tctgttttca ggtttctgtt ttcaggtttc tatttttggt tttctgtctt cgtagaaatg
     2821 atgaaatttt aagttttagg aatttgtcgg aaaaacagaa atccccccac cgtcattccc
     2881 gcgcaggcgg gaatctggaa atttaatgtt gcggtgattt atcggaaatg actgaaactc
     2941 aacagactgg attcccgcct gcgtgggaat gacgagattt taggtttctg tttttggttt
     3001 tctgttttcg cgggaataac ggaactttaa gttttaggaa tttgtcggaa aaacagaaat
     3061 cccaccaccg ccattcccgc gcaggcggga atctagaaat ttaacgttgc ggtgatttat
     3121 cggaaatgac tgaaactcaa cggactagat tcccgcctgc gcgggaatga cagtgtatcc
     3181 atttctaatt ttaatccgct atattttaca caaactattt gaacgatatg acccgcctgc
     3241 cgtaagcttt ctcaagctcc gcctgccttt gacgctccat tcttttcttc ttttccctac
     3301 cgaatttacc caaagcacgc ttcaagtcaa acatcacctt caacgaacgg cggtgtcttc
     3361 tttcttgttc cctatctttt tccaaatcgc tacccaacat actgttttta ctgaggaact
     3421 tggcataatg caattcttgg gtacataagg cgggattaac ctgataaaca ggcatcccct
     3481 ccttatcaaa gaaataagta aacatcatcc aatctaccgc tttaatccac tctgccggca
     3541 aaacggcaaa cctttccaag aaaaaccgca tcgcctcacg cgaaatgata tagccagccg
     3601 tcccccaatg ttcgctctcc agcaaaggaa atgaccggtt ctcataattc aggactttat
     3661 ccggtctgac aataactttc gcaaacatcg tttccaaacg aacgataaag gcagaatcct
     3721 tatcaaaacg ctcttccaac caagtatctt cggcaaggaa cttttctgcg tctttgccaa
     3781 gcaggacatc atcctcaaat acggcaacat agggcagacc ttcatccaat gcctgtttcc
     3841 acaatacggc gtggctcata aagcaggctt tttccacttc gctcaacagg tgctgttttg
     3901 ccaatcccgg caccaattcc gccatcatcc gattcagttc ttcagacggc atcagtgcgt
     3961 cgaaaaactg aaacgggatg ccgtgcctgc cgaaggtatc ggcaatgtgc gccctgcgtt
     4021 ctgcggcgga agccaagctg ataacgtggt tttgcataat ttatcctgtt ttttgtctgt
     4081 tggataaaac ggcgtttttc aacggttttt cagcaatcgg tgcaaaatgc cgaagtattg
     4141 cctcaaggta aacagccgcc gcatcctgcc gtctgctgca aatacgatgt ccatcttttc
     4201 tccttttatt ggaaaggcac aataattttg ccgattaact gttcgcgcct ttgccggcgt
     4261 ttttcccttt ccctgctgat tttggtcaag gcgcggatca ggcggtgttt gaatgtgttg
     4321 gcgggggaat cgcgcctttg ctgtttgcgg ttcaggaggc ggtcgtgttc gatcaggctg
     4381 cccaatgcgc tgttttggtc gtgaaacttg gcataatgca gctcttgggc gcacaaggcg
     4441 ggattgagct ggcaaaccgg cattccttcc ctgtcgtcag ggttgccgaa catcatccaa
     4501 tcgacggggt gcagcccttc agacggcagg gcggcaaacc tgtccaggaa aaaccgcatc
     4561 gcttttcggg aaatgatata gcccgccgtc ccccagtgtt cgctttccaa aagcgggaag
     4621 gcacgcccgc agtagtccgc cacgccggag ggcgaggtca ggacgtgcat aaacatcgtt
     4681 tccaaacgga cgataaaggc ggaatccggg tcaaaccgct cttttagcca gccgtcttcg
     4741 gcaaggaatt tctccgcgcc ttcgccgagt aaaacgtcgt cctcaaatac ggcaatatac
     4801 ggtaagcttt cgtccagcgc ctgcttccac aatacggtgt ggctcataaa gcaggctttt
     4861 tccactccgc tcaaataggg gtgcgccgac aaaccgggga cgagttccgc cattgcctgc
     4921 tccagccttt cagacggcat cagtgcgtcg aaaaactgaa acgggatgcc gtgcctgccg
     4981 aaggtatcgg caatgtgcgc cctgcgttct gcggcggaag ccaggctgat aacgtggttt
     5041 tgcataattt atcctgtttt ttgtctgttg gataaagcgg cgtttttcaa cggtttttca
     5101 gcaatcggcg caaaatgccg aagtattgcc tcaaggtaaa cagccgccgc atcctgccgt
     5161 ctgccgcaaa atccagccac gcgccggcgg gcggcgtgtc cgtccgtttg aaacattgat
     5221 acaaaaaccg gcgggcgcgt tcaaaatctt cttccggcaa atgtttctcc agcaattcat
     5281 acgctactgc ttttatttgg cggtattcaa ggctgtcgaa ccgggtttta aaacccatag
     5341 actgcaaaaa atcgtttctg gcggtttttt ggatgccttg cgcgatttcg tgttggcgga
     5401 tgctgtattt ggatgaaacc tgattggcgt gaaggcggta tttgaccaag gcttcgggat
     5461 aataagccag cctgcccaat ttgctgacat cgtaccaaaa ttggtaatct tccgcccaat
     5521 cccgctcggt gttgtaacgc aaaccgccgt caatgacgct gcgcctcata atcatcgtgt
     5581 tgttgtgtat ggggttgccg aaagggaaaa agtcggcaat atcttcgggt cgggtcggct
     5641 ttttccaaat tttgccgtgc ctgtgatgcc gcgccagccg gttgccgtcc ttttcttccg
     5701 acaaaacttc cagccacgcg cccatcgcga tgatgctgcg gtctttttcc atctcgccca
     5761 cgattttctc aatccagtcg ggggcggcaa tatcgtcggc atcggtgcgt gcaatatatt
     5821 cccccattcc tgactttgcc aattcgtcca gcccgatgtt taaagaggga atcaggccgg
     5881 aattgcgcgg ctgcgcgagg atacggatgc ggccgtcctg ttcttggaaa cgccgggcaa
     5941 tggcaagcgt accgtctgtc gagccgtcat cgacaatcaa aatatccaag ttgcgccaag
     6001 tctgattcac gacggcggct aatgattggg cgaaatattt ttctacgttg taggcgcaaa
     6061 tcaatacgct gactaaaggc tgcaatttat tctcccgata ggcacgatgc cgtctgaagg
     6121 cttcagacgg catttggact gtacaacggt tactcgccca aaagcgcgat gtcggctacc
     6181 gcgttcattt gttctgccaa acggttcaac aggttcaaac ggttttgttt tacggcggca
     6241 tcttccgcca tcaccatcac gccgtcaaag aaggcatcga cttgcggctt gacggaagcc
     6301 agttcggaca aggcggtttg gaaattgcct tcggcgacgg cggcggcgat tttcggctgc
     6361 aagccttgcg cagcagcaaa aagggctttt tcttcgtcct gttgcaacag gctttcgtta
     6421 accgcgccca actcggcatc ggcttttttc agcaggtttt gcacgcgttt gttggcggcg
     6481 gcgagcgcgg cggcttcggg cagttgtttg aacgcggcaa cggcctgcag tttggcggtc
     6541 aaatcgtcca aacggcgcgg ctgtttggcg agtacggcgg caacgatgtc ttgcggataa
     6601 tcgttttgca gcaacacggc aaggcgcgcc tgcataaagt cggcggtttc agacggcgtt
     6661 ttttcgttga gcaaaccttt ggggaagctg tcgaaggtcg tctgaatcag ttcattcacg
     6721 tccaaaccat actgcatcag catccgcaaa atacccaagg cggcgcggcg cagggcgtag
     6781 gggtctttat cgccggtcgg aatcaggccg atgccccaaa ttccgaccag ggtttccagc
     6841 ttgtccgcca gtgccacggc ggcggcaatt ttgctttcgg gcagcttgtc gccggcaaaa
     6901 cgcggctggt agtgctgctc gacggcttcg gcgatttctt cggtttcgcc gtccaagcgg
     6961 gcatagtatt tgcccatcgt gccttgcaat tcggggaact cgccgaccat ttcggtaacc
     7021 aaatcggctt tggcaagacg cgcggcgcgc tcggctgcgg cggcatccgc gtccaacgct
     7081 ttagcgatgt gggcggcaat gctttgcaaa cgttcgatgc gttcggcctg cgaaccgatt
     7141 ttgttgtggt acaccacgtt tgccagcttg ggcaggcggc tttccagagt cgctttttgg
     7201 tcttgcttgt agaagaactc ggcatcagac aggcgcgcgc gcaatacgcg ttcgttgcct
     7261 tggatgatgt gcgacgggtc tgcggtttgc aggttggaga ccagcaggaa gcggttcatc
     7321 agcttgccgt tttggtcgag cagcgggaag tatttttggt tttgctgcat cgtcaaaatc
     7381 aagcattctt gaggcacggc gaggaagtgt tcctcaaaac cggcttccaa taccacaggc
     7441 cattcgacca gcgcggttac ttcgtccaac aaggcttcat cggcggcgac ggcggcgttc
     7501 agacggcgcg cctgcctttc caatgccgtc tgaatcgcgg ctttgcgctc ggcaaacgga
     7561 gcgacgactt tgccttgttc gcgcatttgt gcggcgtagc tgtcggcgtt ttcaatggtg
     7621 atttcgccgt tggagaggaa gcggtgtccc aaggttttgt tgccgctttg cagacccaaa
     7681 acgctgacgt tcacgacatc gccgccgtgc agcacaatca gcccgtggac ggggcgcacg
     7741 aaggtaaatg tgctgctgcc ccaacgcatt acttttggaa tcggcaattt tttcactgcg
     7801 gcattgataa tgtcttccaa aagttcgccc aacggtttgc cggtttggac gtattcgtag
     7861 gcgtacacgt cctgcttgcc gtcgtggacg atggtcaagt cttcgatttt cgcccctgca
     7921 ccgcgtgcga aaccttccaa agccttggtc ggcgcaccgt cttttacggc attcgccacg
     7981 gcagggcctt ttttcacgat tttctgatcg gcttgaacgg ctttgacgtt tttgacttga
     8041 accgccaaac ggcgcggcga ggcataagcc gtaaattcgg ctgcgccgtc aaccagttgc
     8101 gctttttcca agccttcggc aacggcggcg gcaaaatggt tgcccagatt attaagggct
     8161 ttgggcggaa gttcttcggt aaggagttcg attaaaaggg tttgggttgt catatgagac
     8221 tttctgtttg tccgtaggcc ctgcttataa agcctgcata taccgtacgg cctgtattaa
     8281 tggatacgca aaaaaggccg tctgaaaacc tgtttcagac gacgtatcgt tattttttaa
     8341 tcaacgggaa gcccagtttt tcgcggcttt cgacatattt ttgcgccacg gcgcggctca
     8401 acgcgcggat gcgcccgatg taggtggcgc gttcggttac ggaaatcgcg ccgcgtgcgt
     8461 ctaaaaggtt gaacgtatgc cctgctttga gaaccagctc gtaggcgggc agcgcaaggc
     8521 ttgcttcttc aacggcgagc aggcgtttgg cttgcgcttc gtagtcgttg aactggcgca
     8581 gcagccagtc ggcatcgctg tattcgaagt tgtaggtgga ttgctcgact tcgttttggt
     8641 ggtacacgtc gccgtaagtt actgtattcc cgtccagcgt ttttgcccaa acgaggtcat
     8701 agacgttttc tacgccttgc aggtacatcg ccaagcgttc gatgccgtag gtaatttcgc
     8761 cgagtacagg cgtgcagtca atgccgccga cttgttggaa ataggtaaac tgggttactt
     8821 ccatgccgtt gagccagact tcccagccca aaccccatgc accgagggtg gggttttccc
     8881 agtcgtcttc gacaaagcgg atgtcgtgga ctttgggatc gatgcccaat tcgcgcaggg
     8941 agtcgagata aaggtcttgg atattggcgg gggcgggttt aagggcgact tggaattggt
     9001 aatagtgttg caggcggttg gggttgtcgc cgtagcggcc gtctttgggg cggcggctgg
     9061 gttggacgta ggcggcaaac caaggctcgg ggccgagtgc gcgcaggcag gtggcggggt
     9121 gggaagtacc tgcgccgact tccatgtcga aaggttggat gacggtgcag cctttgtctg
     9181 cccagaatgt ttgcagtttg aagatgattt gttggaaggt aagcatggct tatgattcga
     9241 taaaataaag ggtttatttt actgtttcca ttgctgtttg gataggttta tctcaaagac
     9301 agactgattt gaaaacacgg catacatgat atagtggatt aaatt
//
LOCUS       DAWEYF010000073         9322 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.073, whole genome shotgun sequence.
ACCESSION   DAWEYF010000073 DAWEYF010000000
VERSION     DAWEYF010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.073"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            165..1508
                     /locus_tag="WGN93_001225"
     CDS             165..1508
                     /locus_tag="WGN93_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ0227131.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1511..2743
                     /locus_tag="WGN93_001226"
     CDS             1511..2743
                     /locus_tag="WGN93_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ0227132.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2736..3512
                     /locus_tag="WGN93_001227"
     CDS             2736..3512
                     /locus_tag="WGN93_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ0227133.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3512..4138
                     /locus_tag="WGN93_001228"
     CDS             3512..4138
                     /locus_tag="WGN93_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ0227134.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTIFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4142..4735
                     /gene="nqrE"
                     /locus_tag="WGN93_001229"
     CDS             4142..4735
                     /gene="nqrE"
                     /locus_tag="WGN93_001229"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ0227135.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4749..5966
                     /gene="nqrF"
                     /locus_tag="WGN93_001230"
     CDS             4749..5966
                     /gene="nqrF"
                     /locus_tag="WGN93_001230"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ0227136.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMEIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6118..7173
                     /locus_tag="WGN93_001231"
     CDS             6118..7173
                     /locus_tag="WGN93_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ0227137.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQTTADKPLRIS
                     SDFAHVTAEAIRLNRLTHGALDVTVGPLVNLWGFGPDKSVTQEPTPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIIQGGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            7199..7414
                     /gene="nqrM"
                     /locus_tag="WGN93_001232"
     CDS             7199..7414
                     /gene="nqrM"
                     /locus_tag="WGN93_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ0227138.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7538..8116)
                     /gene="grpE"
                     /locus_tag="WGN93_001233"
     CDS             complement(7538..8116)
                     /gene="grpE"
                     /locus_tag="WGN93_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ0227139.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAESAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            8300..9118
                     /gene="cysE"
                     /locus_tag="WGN93_001234"
     CDS             8300..9118
                     /gene="cysE"
                     /locus_tag="WGN93_001234"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ0227140.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
BASE COUNT         2261 a         2605 c         2312 g         2144 t
ORIGIN      
        1 aaacggcttc cgcaaggaaa aaagcagcaa atctgacaaa caggtacaat tcctgataga
       61 atctaacact ttgctacatt aatttattca atgcttttga tgccacgcga cacggtatca
      121 aaacacgccg tttttacctt aaccatcaca agtaatgcaa atatatgatt aaaatcaaaa
      181 aaggtctaaa cctgcccatc gcgggcagac cggagcaagt catttatgac ggcccggcca
      241 ttaccgaagt cgcgttgctt ggcgaagaat atgccggtat gcgcccctcg atgaaagtca
      301 aggaaggcga tgccgtcaaa aaaggccaag tgctgtttga agacaaaaag aatccgggcg
      361 tggtgtttac cgcgccggtt tcaggcaaaa tcgccgccat ccatcgcggc gaaaagcgcg
      421 tacttcagtc ggtcgtgatt gccgttgaag gcaacgacga aatcgagttc gaacgctacg
      481 cgcccgaagc gttggcaaac ttaagcggcg aagaagtgcg ccgcaatctg atccaatccg
      541 gtttgtggac tgcgctgcgt acccgtccgt tcagcaaaat ccctgccgtc gatgccgagc
      601 cgttcgccat cttcgtcaat gcgatggaca ccaatccgct ggcggcagac cctgtggttg
      661 tgatcaaaga agccgccgag gatttcagac gaggtttgct ggtattgagc cgtttgaccg
      721 agcgtaaaat ccatgtgtgt aaggcagctg gcgcagacgt gccgtctgaa aatgctgcca
      781 acatcgaaac acatgaattc ggcggcccgc atccggccgg tttgagtggc acgcacattc
      841 atttcattga gccggtcggt gcaaacaaaa ccgtttggac catcaattat caagatgtaa
      901 ttgccatcgg acgtttgttt gcaacaggcc gtctgaacac cgagcgcgtg attgctttgg
      961 gtggttctca agtcaacaaa ccacgcctct tgcgtaccgt tttgggtgcg aaagtatcgc
     1021 aaattactgc gggcgaattg gttgacgcag acaaccgcgt gatttccggt tcggtattga
     1081 acggcgcgat tacacaaggc gcgcacgatt atttgggacg ctaccacaat cagatttccg
     1141 ttatcgaaga aggccgcagc aaagagctgt tcggctgggt tgcgccgcag ccggacaaat
     1201 actccatcac gcgtacgacc ctcggccatt tcctgaaaaa caaactcttc aagttcacga
     1261 cagccgtcaa cggtggcgac cgcgccatgg tgccgattgg tacttacgag cgcgtaatgc
     1321 cgctagacat cctgcctacc ctgcttttgc gcgatttaat cgtcggcgat accgacagcg
     1381 cgcaggcatt gggttgcttg gaattggacg aagaagacct cgctttgtgc agcttcgtct
     1441 gcccgggcaa atacgaatac ggcccgctgt tgcgtaaggt gctggaaacc attgagaagg
     1501 aaggctgatt atgggcttga aacattttct ggaaaaaatc gaaccgcact tcctgccggg
     1561 cggcaaacat gaaaaatggt atgccctcta cgaagctgcg gcgacgattt tctatacatc
     1621 cggtgcggta acgcgcaaag cggcacacgt ccgcgatgcg ctcgactcca aacgcatgat
     1681 gattttggtg tggctggctt tgttccctgc catgttctac ggtatgtaca acgtcggcgc
     1741 acaggcattc ggtgccttaa cgcccgattt gctgcaacaa agcatcgcca acgactggca
     1801 ttacgccctt gccaacgctt tgggcatcaa tatgtcgtct gaagcgggcg tgttgggcaa
     1861 aatgctgttc ggcgcgattt acttcctgcc gatttacgcg accgtattta ttgtcggcgg
     1921 tttctgggaa gttttgttcg ccaccgtgcg caaacatgaa atcaacgaag gtttctttgt
     1981 tacctcgatt ctgtttgcct taatcgttcc gcccacgctg ccgctgtggc aggcagcttt
     2041 gggtatttct ttcggcgttg tggttgcgaa agaagtattc ggcggtacag gtaaaaactt
     2101 catgaaccct gcgctggcag gccgtgcctt cctgttcttc gcctaccctg ccaacttgag
     2161 cggcgatgcg gtttggacgg cggttgacgg ctattccggc gcaaccgcgc tggcgcaatg
     2221 ggcggcacac ggtgcagacg gcctgaaaaa cgccgtaacc ggtcaaacca tcacttggat
     2281 ggatgcgttt atcggcaaac tgcccggctc catcggcgaa gtctccactt tggcactctt
     2341 aatcggcggc gcgtttatcg tgtttgcccg catcgcttct tggcgcatta ttgccggcgt
     2401 gatgatcggt atgattgcca tgtcttcgct gttcaacttc atcggttcgg acaccaacgc
     2461 tatgtttgct atgccttggt actggcattt ggtcgtcggc ggcttcgcca tcggtatgct
     2521 gtttatggcg accgaccccg tttccgcttc ctttaccaat gtcggcaaat ggtggtacgg
     2581 cgcactgatc ggcgtgatgt gcgtattgat ccgcgtggtc aaccctgctt accccgaagg
     2641 catgatgttg gcgattctgt ttgccaacct gtttgccccg attttcgact attttgtcgc
     2701 acaagcgaac atcaaacgca gaaaggcgcg cagcaatggc taagaaattc gataaagaca
     2761 gcttcagcgg cacgctgatt gtggtgttgg cggtcagcct gatttgctcg gtcatcgttg
     2821 ccggtgcggt cgtcggcttg aaacccatcc aagagaaaca aaaactccaa gacaaacaag
     2881 gctatatctt gagcgtagcc ggtttgatgg ataaggacac cgacatcggt aaaacctttg
     2941 ccgagcgtat cgagcaacgt gttgtcgatt tggcgaccgg cgaatacgtc gccgatgcgc
     3001 ctaaagactt cagcgcgcgc atcgcaggca aagaccctgc ccaaagcatc cgcatcaaac
     3061 ccgaagacga tttggcaggc atcaaaagcc gtgccaaata caccgaggtt tatttggtaa
     3121 aaggcgaaga cggcaaaatc gggcaaatca tcctgcctat gcacggtaac ggtttgtggt
     3181 cggtcatgta cggctttgtc gccatccagc ccgacggcaa caccatcaac ggcattacct
     3241 actacgaaca aggcgaaacc ccgggcttgg gcggcgaaat cggcaatccg ttgtggcagc
     3301 aaaaattcgt cggcaaaaaa ctgtttgacg gacaaggcaa actcgccctg cacgtcggca
     3361 aaggcgcggg ttcggacaaa gaacacggcg tagatgccct ctccggcgcg tcgctgacat
     3421 ccaaaggcgt gcaaggttcg ttcgcctact ggttcggcga aaacggctat atcccctacc
     3481 tgaacaaatt gaaatcagca ggagcgcaat aatggctgat atgaaacgct tgaaacactt
     3541 aatgttttca ccctttatcg acaacaaccc gattgccttg caggttttgg gtatttgttc
     3601 ggctttggcg gttaccacca aacttcagac ggccatcgtg atgggtattt ccgtagcttt
     3661 ggtaaccggt ttttccagct tcttcatttc gctggtacgc aactacatcc ccaacagcat
     3721 ccgcatcatc gtgcaaatgg caattatcgc gtcgctggtt acgctggtcg accaactctt
     3781 gcaggcattt gcctacgaat tgtccaaaca gctttccgta ttcgtcggtc tgattattac
     3841 caactgtatc gtgatgggcc gcgccgaagc atttgcgatg aaagagccgc cgctggaaag
     3901 cctgatcgac ggtatcggca acggcgcggg ctacgggatg atgctgcttg tcgttgccac
     3961 cgtccgcgaa ctgatcggct cgggcaaact cttgggctac accattttcc aaaccgtgca
     4021 ggacggcggc tggtatcaga ccaacggctt gttcctgctc gcccccagcg cgttcttcat
     4081 catcggcttt ttgatttggg gactgcgtac ctggaaaccc gaacaggcgg aggaataagc
     4141 tatggaacac tatttgagcc tcttcatcaa atccgtcttc attgaaaata tggcgctatc
     4201 cttctttttg ggtatgtgca cgtttttggc ggtatccaaa aaagtatcca ccgcattcgg
     4261 tttgggtgtg gcggtaattt tcgtactcgg gctgtccgtc cctgtcaacc aactcgttta
     4321 ctcgctgctc aaagacggcg cgattgtcga aggcgtggat ttgacctttt tgaaattcat
     4381 caccttcatc ggcgtgattg ccgctttggt gcagattttg gaaatgttct tggataaatt
     4441 cgtccccgcc ctctacaacg cattgggcat ctacctgccg ctgattaccg tgaactgcgc
     4501 gattttcggc gccgtatcgt ttatggcgca acgcgaatac aacttcggcg agtccgttgt
     4561 atacggcttc ggcgcgggct tgggctggat gttggcgatt gtcgctttgg cgggcattac
     4621 cgaaaaaatg aaatattcgg acgctcccaa aggcctcaaa ggcttgggca ttacctttat
     4681 cgccgccggc ctgatggcga tggcgtttat gtcgttctcc ggcatccagt tataagaaag
     4741 ggatcggtat ggagattatt ttaggtatcg tgatgtttac cgtcatcgtt ttggttttgg
     4801 cactgatgat tctgtttgcc aaatccaaac tggtcagcga aggcgacatc accatcaaag
     4861 tcaacggcga aaaagagctg acgatgcccg ccggcggcaa actcttgggc gcgcttgcca
     4921 acgaaggcat ctttatcccc tccgcctgcg gcgggggcgg ttcgtgcgga caatgccgcg
     4981 tcgtcgtaaa aagcggcggc ggcgacatcc tgccgaccga gctgtcccac atcagcaaac
     5041 gcgaagcacg cgaaggctgc cggctgtcgt gccaagtcaa cgtcaaaacc gatatggaga
     5101 ttgaagtacc cgaagaagtg ttcggtgtga aaaaatggga atgcaccgtc atctccaacg
     5161 acaacaaagc cacgttcatt aaagaactca agctcgccat tcccgaaggc gaagaagtcc
     5221 ccttccgcgc cggcggctac atccaaatcg aagccccgcc gcacaccgtt gcctacaaag
     5281 actttgacat tcctaaggaa tatcacgaag actgggacaa atacaatttg tggcaatacg
     5341 tttccaaagt ggacgagccg attttgcgcg cctactctat ggcttcgtat cctgaagaaa
     5401 aaggcatcat tatgctgaac gtgcgtatcg ccacgcctcc cccgcgcgta cctgacgcgc
     5461 ctccgggaca aatgtcgtcc tacatctggt cgctcaaacc cggcgacaaa gttacgattt
     5521 ccggcccgtt cggcgaattt ttcgccaaag acaccgatgc cgaaatggta tttatcggcg
     5581 gcggtgcggg tatggctccg atgcgttccc acattttcga ccagttgaaa cgtttgaact
     5641 ccaaacgtaa gattaccttc tggtacggcg cacgttccaa acgcgagatg ttctatgtcg
     5701 aagactttga ccaactcgcg gcagagttcc cgaacttcac gtggcacgtc gccctgtccg
     5761 acccgctgcc ggaagacaac tgggacggct acacgggctt cattcacaac gtggtttacg
     5821 aaaaccacct gaaaaaccac gaagcaccgg aagactgcga attttatatg tgcggcccgc
     5881 cgattatgaa ccagtccgtc atcaaaatgc tcaaagactt gggcgtggaa gacgaaaaca
     5941 tcctcttgga cgatttcggc ggttaaatat tcggcttcaa atacaaaagg aagaaacctc
     6001 ggtttcttcc tttttctatc cgatgccgcc cgaaccccct tcagacggca tcggcataga
     6061 aacatatcgg ccgttttgcg atataattca aaccatttgc caaaaccgtc aaacactatg
     6121 ccgtctgaaa cacgcctgcc gaactttatc cgcgtcttga tatttgccct gggtttcatc
     6181 ttcctgaacg cctgttcgga acaaaccgcg caaaccgtta ccctgcaagg cgaaacgatg
     6241 ggcacgacct ataccgtcaa atacctttca aacaatcggg acaaacttcc ctcccctgcc
     6301 gaaatacaaa agcgcatcga tgacgcgctt aaagaagtca accggcagat gtccacctat
     6361 cagcccgact ccgaaatcag ccggttcaac caaaccacag ccgacaaacc cctccgcatt
     6421 tcaagcgact tcgcacacgt taccgccgaa gccatccgcc tgaaccgcct gacgcacggc
     6481 gcactggacg taaccgtcgg ccctttggtc aacctttggg gattcgggcc cgacaaatcc
     6541 gttacccagg aaccgacacc ggaacaaatc aaacaagcag catcttatac gggcatagac
     6601 aaaatcattt tgaaacaagg caaagattac gcttccttga gcaaaaccca ccccaaagcc
     6661 tatttggatt tatcttcgat tgccaaaggc ttcggcgttg ataaagttgc gggcgaactg
     6721 gaaaaatacg gcattcaaaa ttatctggtc gaaatcggcg gcgagttgca cggcaaaggc
     6781 aaaaacgcgc gcggcgaacc gtggcgcatc ggtatcgagc aacccaatat catccaaggc
     6841 ggcaatacgc agattatcgt cccgctgaac aaccgttcgc ttgccacttc cggcgattac
     6901 cgtattttcc acgtcgataa aagcggcaaa cgcctctccc atatcattaa tccgaacaac
     6961 aaacgaccca tcagccacaa cctcgcctcc atcagcgtgg tcgcagacag tgcgatgacg
     7021 gcggacggct tgtccacagg attattcgta ttgggcgaaa ccgaagcctt aaagctggca
     7081 gagcgcgaaa aactcgctgt tttcctgatt gtcagggata aaggcggcta ccgcaccgcc
     7141 atgtcttccg aatttgaaaa actgctccgc taaacataca aaccgattag gaaacaccat
     7201 gaaaaccctg ctccttacct tcggcatctt cctgaccgtc atcatcggta tggcggtcgg
     7261 ctatattttc tccaaacgca gcatcaaagg cagttgcggc ggcattactg ccttgggtat
     7321 gaaaaaaatg tgcgactgcg acacaccttg cgacaccctg caaaagaaac tggatgaaga
     7381 aaaacaggca ggcggcatac gggttgaccg ttaacgccga aacaaaatgc cgtctgaagc
     7441 ccgacaggcg ggttcagacg gcattgccgc tttacttcga tcggtttata cgcaaaacgc
     7501 gcttcaggaa ataaatcaga ttattcccca gacgccttca ggcttccttc tgtgccaccg
     7561 taaccatagc cgggcgcaac acgcggtcgg acagcgtata acccttcttc atcacgccca
     7621 ccacggtatt gggttcctgt tcgcttgcca ccgcctgcat cgcctgatgg atattcggat
     7681 cgagcttatc gcccgcttta ggattgattt ccttgatttg cgtagcatca aatgctttct
     7741 gcaactcgtt caaagtcatc tgcacgccca ttttcagcgc atcgaaattg ccgctctgat
     7801 ccaaaagcgc catttccaaa taatccttga ccggcagcat ttccacggca aacttctgtc
     7861 cggcgaactt gtgcgtatcc gcaatttcct gctggtggcg gcggcgcagg ttttgctcgt
     7921 ttgccaaagc gcgcagctgc tcgtctttca actgcgcttc cagctcggca atccgcgcct
     7981 gcaaatcctc ataagccgac tctgcggcag cctgttcctg cacaccgtcc gcatttccta
     8041 ctgtctcgac ggtttccacc gcctccacat tttcaaccgc ttcttcactg ttttgctgct
     8101 gtgtctgttc gctcatatcg tatcccttaa aacaaattgg aaatcaaaat ccagttatta
     8161 cccgcgcaag ataaggacat tttcaagaaa cttcaagcaa aagcagagaa tttcaaattc
     8221 attttcaaat cccctaccga aaaaataata tagacggtaa gatactgccg accatatcga
     8281 ttttcaaacg tcatcactca tgaaaaaaga ccatttaaac acaaccggtt tcgacctctg
     8341 gcacaccatc cgcgaagaaa ccgcggccgc ggtctccgcc gaaccgatgc tggcaagttt
     8401 tttgcaccaa accgtgttgc gccacgagtc cctcggctcc gtccttgcct accacctttc
     8461 cagcaaactc ggcagcccga ttatggacgt gcgtgcgctg tttgaaatct accagcaggc
     8521 gttgggtagc gacacccaaa tcggcaaatg cgtcgaagca gacttaaaag ccatctacga
     8581 acgcgatccc gcctgcgacg aatattcgct gccgctttta tatttcaaag gcttccacgc
     8641 gattcaggca caccgcatca accaccggct gtatctcgac gggcgcaaaa cgctggcgta
     8701 tttcctgcaa aaccgtatgt ccgaagtatt cggcgtggac atccatcccg ccgcccgttt
     8761 cggatacggg ctgatgctcg accacgccac cggctttgtt gccggcgaaa ccgccgtgtt
     8821 gggcaacaat atttcgattt tgcacggcgt aacgctcggc ggttcgggca aagaaggcgg
     8881 cgaccgccac cctaaaatcg gcgacggcgt gatgatcggc gcaaacgcct cgatattggg
     8941 caatatccgc atcggcagca atgccaaaat cggggcgggc agcgtcgtgg tttcagacgt
     9001 gccgccgtcc atcacggttg tcggcgtacc cgccaaaccc gtggcgcgat cgctcaaaac
     9061 accgtcggcg gatatggatc aaaatatcca gtttaccgaa atcgacttta tgatttgaat
     9121 atccgcacca atgccgtctg aaacgccaaa cgggcttcag acgacattgc ccgcttcaag
     9181 cctgcgcctt gatatgccgc cgatgtcggc acttgccagt cggacaaaat gccttttatt
     9241 caatacaccc gattcccacg caaccggaaa tatagtggat taacaaaaat caggacaagg
     9301 cgacgaagcc gcagacagta cg
//
LOCUS       DAWEYF010000074         9299 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.074, whole genome shotgun sequence.
ACCESSION   DAWEYF010000074 DAWEYF010000000
VERSION     DAWEYF010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9299
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.074"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(91..1371)
                     /locus_tag="WGN93_001235"
     CDS             complement(91..1371)
                     /locus_tag="WGN93_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ0227141.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRSCVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            complement(1593..2213)
                     /locus_tag="WGN93_001236"
     CDS             complement(1593..2213)
                     /locus_tag="WGN93_001236"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ0227142.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WGN93_001237"
     CDS             complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WGN93_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ0227143.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            3352..3924
                     /gene="ampD"
                     /locus_tag="WGN93_001238"
     CDS             3352..3924
                     /gene="ampD"
                     /locus_tag="WGN93_001238"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ0227144.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            4118..5404
                     /locus_tag="WGN93_001239"
     CDS             4118..5404
                     /locus_tag="WGN93_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ0227145.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGPVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            5552..8077
                     /gene="ligA"
                     /locus_tag="WGN93_001240"
     CDS             5552..8077
                     /gene="ligA"
                     /locus_tag="WGN93_001240"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ0227146.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGLITEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDIVVVRRAGDVIPEVVRVIFERRPMQETDVAASDGIGHRQDDLFAET
                     PSANQTQTVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQTPSED
                     SSVGASGKHKKQPTKWAENILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSILSEAELLTLLG"
     gene            8110..>9299
                     /locus_tag="WGN93_001241"
     CDS             8110..>9299
                     /locus_tag="WGN93_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ0227147.1"
                     /translation="MSTFPNHTMHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDF
                     NSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFPAESIDRLLSG
                     VRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLARLGRVHN
                     GKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEP
                     NTPFGHTPPKGLPQDEAALDIEDAVHGTLEGAGFIHYETSAFAQNNKQCRHNLNYWQF
                     GDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEF
                     MMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETNPAVFRPTEKGRLFLN
                     DLLQ"
BASE COUNT         2205 a         2816 c         2322 g         1956 t
ORIGIN      
        1 ttgtcctgat ttttgttaat ccactatatc aatctgacag caaaatgccg cctgaaaaca
       61 gttcagacgg cattttaaac cgcaaacggc ttacagcttc cattcgctca gcttggcagc
      121 gtaagcttcc aaatctgcaa tcggacgggt tgccacgccg ctttccatcg ctgctttggc
      181 ggcagccgta gcaacgcgcg gcagcaggcg ggaatcgaac ggagtcggaa tcaggtattc
      241 cgcgccgaat tcaaatttct taccgtaagc ggcaaccact tcttcggtta cttcttccat
      301 cgccaaatcc gccaaagcat acacgcagga gcgtttcatt tcttcgttga tggtcgtcgc
      361 gccgacatcc aacgcgccac ggaagatgaa tgggaagcac aatacgttgt tcacttggtt
      421 cgggaagtcg gaacggccgg taccgataac cacgtccgga cgggtttctt ttgccagcgg
      481 cggcaggatt tccggattcg ggttggccat ggcgaacacg atgggttttt cgttcatcgt
      541 gttcaacatt tcgggggtca gcaggttcgc gccggagagg cccaagaaga tgtctttacc
      601 tttgacggca tcggcaagta cgcgctggcc attgtcttca acggcgtaga attttttgga
      661 ttcgtccatg cgatctttgt cttcgcgggt ttggtaaatc acgcctttgg agtcgcaaac
      721 ggtcacgttt tcgcgtttca agcccaaatc cagcaattgg ttcaagcagg caatcgcggc
      781 cgcacctgcg ccggaacaca ccaaagtcgc ttcttcgatt ttacggccgg taaaacgcag
      841 ggcgttcaat acggcagcgg cggtaatgat ggccgtgccg tgctggtcgt cgtggaatac
      901 ggggattttg cagcgtttgc gtaattcgcg ttcgatgtag aaacactcgg gtgctttgat
      961 gtcttcgagg ttgatgccgc cgaaggtcgg ctctaaagcg gcgatgatgt ccacgagttt
     1021 ttgcgggtct ttttcatcga tttcgatgtc gaacacgtcc acaccggcga attttttgaa
     1081 caatacgcct ttgccttcca tcacgggttt gcccgccagc gcgccgatgt cgcccaagcc
     1141 caaaacggcc gtaccgttgg aaatgacggc gaccaagttg cctttggcgg tgtatttgta
     1201 ggcattttgc ggatcggcat ggatttccat acaaggagcg gctacgcccg gagagtacgc
     1261 caacgccaaa tctttgtcgg tcgccaaaga tttggtcggg gtaacggaaa ttttgcccgg
     1321 aacgggtaat tcgtggaact tgagggcggc ttctttcaat gagttttcca tgtgtcaatc
     1381 ctgttgcgag aaaaagattt gaatcggact gtccgaaacg ctttcgggtc atcatgttac
     1441 gggcggttcg ttaatattgc cgacgcatcc tgccttgtaa ccgagcgtaa ttctatcatg
     1501 ccgaaagttt ggcgcatacc gccattttca cctgcggcac tgccgtttga ttttcggcgc
     1561 gggtggatgc gcttgtttca atatttgccg cattaacagc cgaaatgtcc gtccaacact
     1621 ttttctatgt tgtttctgac ttcatccaag ctgcggttac tgtcgataat ggcgtaccgt
     1681 tcgggacagg cggcggcacg gttcagataa acgctgcgca cacgcatgaa gaaatctgcc
     1741 tgttcctgct cgaaccggtc tttctcgcgc gactgtccga tacgcgccat cgacacttcc
     1801 agcggcacat ccaacagcag ggtcaaatcg gggcgcaaac cgccctgcac ccaatgttcc
     1861 aaaatttcaa tgtcttcaga cggcatcccc cgcccgccgc cctgataggc gaaggttgcg
     1921 tcggtaaaac ggtcggacac gacatggatg ccgtctgaaa gtgcaggcaa tatcacgtct
     1981 tcaatatgct gcattctggc ggcgaacatc atcagtgttt ccgcacgcaa accggctttg
     2041 gtttcagggt tgagcaggat ttcgcgcaag gcctcaccga ccggcgttcc gcccggttcg
     2101 cgcgtgaaca gcacgggcag ccccctccgt tcaaaccatg ccttgatgac ggcaaggttg
     2161 gtggatttgc cggcaccgtc tatgccgtcc aaagtgatga attgcggttt catgcttgca
     2221 gttccggtaa gggtatgccg tccgaaaaca caaacttttc agacggcatg gtttattttt
     2281 tcaaaatata tttgcgaacg gcggcgttgt gttcggtcaa atcatggctg aactggctca
     2341 agcccgtacc gtccattttg gacacgaaat acaggtattt ttcaccggac ggatgggcgg
     2401 cggcatcgag tgccgccttg ccgggcagcg cgatcggggt tggcggcaga ccgccgcgcg
     2461 tgtaggtgtt gtacggcgtg tcgcggcgca ggtcggcttt acggattttg cccttgtatg
     2521 ccgcacccat gccgtaaatc acggacgggt cggtttgcag gcgcataccg attttcaggc
     2581 ggttgacgaa gacggaagcg acatggtcgc ggtcggcttc atgccctgtt tccttttcga
     2641 tcaggctcgc cataatcagc atttcataag ggtttttata aggcagcccg tcctgcctgc
     2701 tttcccatgc ctcattcagt cggcgttgca tcgccttgta ggcgatttgg taaatccgta
     2761 aatcgctgcc gcccgcatcg atttcgtagc tgtcggggaa aaactgccct tcaggattgc
     2821 cgctgaaggc atcaggggca acttccgcca tcagtttttc attgctccag cctttggtgt
     2881 cgtgttcgat gtcgggcgtt gcgtcgatga ctttcctcat atgcgaaaaa cgcgaacctt
     2941 cgataatctg cacggtaacg gaatccggcc tgccgccgcg cattttctgc aagatatccc
     3001 aagcagacac ttccgaaggc agtctgtacg tccccgtatg cagcctgttg tgcacaccca
     3061 aaacgtaggc cgccgccgtc aaaacatgcc tgctgaacac gatgcggtct tcggcaagtt
     3121 tcctgccgac cgacgaaata ccctggtttt tggcaatttt aatcctgtat gccctgccgt
     3181 tgtctttagg gacgaaaagc agcgcggcga aaacggctgc cgatacggtc aaaaaaacgg
     3241 cagaccattt caacaatttt ctcaacatgg taggattccc agcattcgga atacgtctta
     3301 aaattcgggc gacagtataa cccaaattgc ccgccggaca ggaagaacat catggacaat
     3361 cacgccgaag cacactggca aaacggctgg cttcaaagca tacgccatac cccgtcgccc
     3421 aatttcagcc cgagggaaac gggggaaacg gtttccctga tcgtgttgca caacatttcg
     3481 ctgccgccgt tcgaatatgg tacggatgcg gtggaaaagc tgtttgccaa ccggctcgac
     3541 cccgacggac atccgttctt cagcctgata cacactttgc gcgtatccag ccatttttta
     3601 atcaaacgcg acggcgaaac ggtacagttc gtttcctgcg acaatatggc ataccatgcc
     3661 ggcgtatcct cgtttcgcgg acgggaaaaa tgcaacgcat tttccatcgg catcgaactg
     3721 gaaggctgcg atttcgaacc ctttaccgaa gcgcaatacc gttcgctcga agccttgttg
     3781 gacgcaatct gccgccgcta ccccatcacg gcggtaacgg ggcaccaaga catcgcgccc
     3841 ggccgcaaaa ccgaccccgg tcattttttc gactggcggc ggatacgggg gaaagggttt
     3901 cccgtggaca gaaatgccgt ctgaaaacca cagattttag atggcatttc ggaaaatttc
     3961 cgcttatttc gacacactgc tgtcagaccc tgcaattttc gttataattc aaacgttata
     4021 accggccgtt ccgtcagact gccggaaacg caagcccgat ttaaccgcag tacccgcact
     4081 ttgcgcatcc tgcatcccga aatttaaagt gattgccatg atttacatcg tactgttcct
     4141 cgccgccgtc ctcgccgttg tcgcctacaa tatgtatcag gaaaaccaat accgcaaaaa
     4201 agtgcgcgac cagttcgggc actccgacaa agatgccctg ctcaacagca aaaccagcca
     4261 tgtccgcgac ggcaaaccgt ccggcgggcc agtcatgatg ccgaaacccc aaccggcggt
     4321 caaaaaaacg gcaaaacccc aagaccccgc catgcgcaac ctgcaagaac aggatgccgt
     4381 ctacatcgcc aagcagaaac aggcaaaagc ctccccgttc aaaaccgaaa tcgaaaccgc
     4441 cttggaagaa agcggcatta tcggcaactc cgcccacacc gtttccgaac cccaaaccgg
     4501 acattccgca ccgaaacctg ccgacgcgcc ggcaaaacct gcacccgttc cgcaaacacc
     4561 tgcaaaaccg ctgattacgc tcaaagaact gtcaaaagtc gaattaccct ggtttgacgt
     4621 gcgcttcgac ttcatctcct atatcgcgct gaccgaagcc aaagaactgc acgcactgcc
     4681 gcgcctttcc aaccgctgcc gctaccagat tgtcggctgc accatggacg accatttcca
     4741 gattgccgaa cccatcccgg gcatccgcta tcaggcattt atcgtgggta ttcaggcagt
     4801 cagccgcaac ggacttgcct cgcaggaaga actctccgca ttcaaccgcc aggtggacgc
     4861 attcgcacaa agcatgggcg gtcagacgct gcacaccgac cttgccgcct ttatcgaagt
     4921 ggcttccgca ctggacgcat tctgcgcgcg cgtcgaccag accatcgcca tccatttggt
     4981 ttccccgacc agcatcagcg gcgtagaact gcgttccgcc gtaacgggcg tgggtttcgt
     5041 tttggaagac gacggcgcgt tccactatac cgacacgtcg ggctcgacca tgttctccat
     5101 ctgctcgctc aacaacgagc cgtttaccaa tgcccttttg gacaaccagt cctacaaagg
     5161 cttcagtatg ctgctcgaca tcccgcactc tccggcaggc gaaaaaacct tcgacgattt
     5221 gtttatggat ttggcggtac gcctgtccgg ccagttgaac ctgaatctgg tcaacgacaa
     5281 aatggaagaa gtttcgaccc aatggctcaa agacgtgcgc acttatgtat tggctcgtca
     5341 gtccgagatg ctcaaagtcg gtatcgaacc gggcggcaaa accgcattgc gcctgttctc
     5401 ctaaaatcga atgcaatcaa agcggatatg tcgttacggc atatccgctt tttttcgggt
     5461 aaaattcagc tgttttcaac ctatcatttt tcagacgacc tttgcccgtt tcatcccgta
     5521 tcagacaaag gtcgtctgaa aaccttctct catgaatcca aactcaaaac ataacactaa
     5581 ctttaccaat cttcttaaac cgtctgatag tgatataaaa caatttgccg cacaacacat
     5641 ccgccacctc accgacctgc tcaaccgcta tgcctacgaa tactacaccc tcgacgcgcc
     5701 cagcgtaccc gatgccgaat acgacaaatt attccgcgag ctcgaagcgt tggaacgaaa
     5761 ccatcccgag ctcaaactgc ccgacagccc gacccagcgc gtcggcggcg agcctctggc
     5821 gggatttgcc gaagtacgcc acgaagtgcc gatgctgtcg ctgaccaacg ccttttcccc
     5881 gcaagatgaa aacggcgtgt tcgaccatgc agaaatgtac gctttcgacc aacgcgtgcg
     5941 cgacggtttg gacggcggca aacccgaata cgttatcgaa cctaaattcg acggcctcgc
     6001 catcagcctg ctctaccgcg acggcgtatt ggtacaggcg gcaacgcgcg gcgacggcac
     6061 aacgggcgaa gacgttaccc aaaacatcaa aaccgtatcc aacatcccct tgcggctgca
     6121 cggcgaaaat acgcccgaac tcatcgaagt acgcggcgaa gtactgatgc aaaaagccga
     6181 ttttgccgcc ctcaataaaa gacaagccga aaacgggcaa aaaccctttg ccaatccgcg
     6241 caacgccgcc gccggcagcc tacgccaact cgattcgcgc atcaccgcgc agcgcaaact
     6301 gcactttttc ccctactccg ttgcccgcca gcaaggcggt ttgattacgg aagaacacat
     6361 ccaagaactc gcctatttcc aagcactcgg cttcagtctg cccaatggca atttcggctg
     6421 tttcaaaaat atcgatgaag tattggcgtt ttacgaacaa atgcagcaaa aacgccccga
     6481 actgccctac gaaatcgacg gcatggtcgt caaagtcaat agcttggcac aacagcgcga
     6541 actcggcttc atctcccgcg cgccgcgctg ggcgattgcc cacaaattcc ccgccgaaga
     6601 agccctgacc gtcgtcgaag cgattgacgt gcaaatcggg cgcaccggcg ccgttacccc
     6661 cgtcgcccgc ctgcaacccg tattcgtcgg cggcgtaacc gtaaccaacg ccaccctgca
     6721 caatcaggat gaagtatcgc gtaaagacgt tcgcgtcgga gacatcgtcg tcgtgcgccg
     6781 cgccggagac gtgattcccg aagtcgtgcg cgtgattttt gaacgccgcc cgatgcagga
     6841 aaccgacgtt gccgcttcag acggcatcgg gcatcggcag gacgatttgt tcgccgaaac
     6901 gccgtccgcc aatcaaaccc aaaccgttcc gctccacaag ccctaccgcc tgccgaccca
     6961 ctgccccatc tgccgcagcg aaatcgaacg cgaagaaggc gaagccgtcg cccgatgcag
     7021 cggcggcatg ctttgtcagg cacaacgcgc gcaaggctta atccacttcg cctcgcgcaa
     7081 agcgatggac atcgacggct tgggtgaaaa acaaatcgaa cagcttgtcg cccaagacct
     7141 cgtccgccac ttcgccgacc tctaccgcct cgatattccg accctgcaaa aaatgaagga
     7201 aacggcggac aaaaccgttg ccgaatcgga tcaaacgccg tctgaagaca gttcggtcgg
     7261 cgcgtcgggc aaacataaaa aacaaccgac caagtgggcg gaaaacatcc tcgcaggcat
     7321 agaatccggc aaaacacccg aactcgcccg cttcctgttc gcgctcggca tccgccacgt
     7381 cggcgaacgc accgccaaaa cgctggcgca ggcattcggc acattggaac gcgtccgccg
     7441 cgcccccgaa cccgtcctcg cctgcctgcc cgacatcggt acggtagtgg cgcattccat
     7501 tgcccacttc ttcgcccaag ccgaacagca ggcgatgata gacgaactgc tcgccgcagg
     7561 cgttgccccg caaacccaag ccgttaccat cccgcccgcc cgccacgccg aaccgcaacg
     7621 ctggatcgcc cgcctgcccg acttcaaaat tagcgaaaac aaagcccaag ccttatggga
     7681 actcgctggt aaaaacatag aaggtctaca aaacgacaaa gccctccccg ccgactggca
     7741 agcatggcgc agcgaaccac aaaacgccgc cctactcgaa aacctgaaaa ccttcttcgc
     7801 gcaaatgccg tctgaagacg aggcggcgca aggttcagac ggcatcaata aagccgtagc
     7861 gggcaaaacc ttcgtgttaa ctggcacact gcccaccctc aaacgcgacc aagcccaatc
     7921 cctaatcgaa gccgcaggcg gcaaagtttc cggcagcgtt tccaaaaaaa ccgattacgt
     7981 cgtcgctgga gaagccgcgg gcagcaagct ggaaaaagcc aatgccttgg gtgtttccat
     8041 cctcagcgaa gccgaactgc ttaccctgct cggctgaacc tgtgccgtct gaaccgcctt
     8101 cagacggcat tgtccacttt tccgaaccac accatgcaca ccatttcctt tccaaaccgc
     8161 acccgactca ccgccctgcc gcccctgtcg ctttacatcc acatcccgtg gtgcatcaaa
     8221 aaatgcccgt attgcgactt taattcccac agcctgaaaa acggattgcc cgaagccgcc
     8281 tatatcgacg cgctgctgac cgacttgcag cttgaattgc ccaatatttg gggcagaccg
     8341 gtggaaacga tctttttcgg cggcggtacg cccagcctgt ttccggcgga atcgattgac
     8401 cgtttgttga gcggcgtgcg ttcgctgttg cgcttgcagc cggaagcgga aattacgttg
     8461 gaagccaatc cggggacgtt tgaaatcgag aagtttcaag gatttaaaga cgcaggtatt
     8521 acgcggcttt ctattggcgt gcagagtttc aacgacgata tgcttgcgcg gctggggcgc
     8581 gtccacaacg gcaaagaagc cttaaccgcc atcgacaccg ccttgaaatt atttgataaa
     8641 gtcaatatcg acttgatgta tgccctgccg aaccagaccg ttcagacggc attggacgac
     8701 gtacaaaccg ccatcgctac gggcgcgacc cacatcagcg cgtatcatct gacgatggag
     8761 ccgaacacgc cgttcggtca tacgccgccg aaaggtttgc cacaagacga agccgccctc
     8821 gacatcgaag acgcagtaca cggcacgctg gaaggcgcgg gttttatcca ctacgaaaca
     8881 tcagcctttg cacaaaacaa caaacaatgc cgccacaatt tgaactactg gcagttcggc
     8941 gattatttag gcataggcgc gggcgcgcac ggcaaaatct cctatcccga ccgcatcgag
     9001 cgcaccgtcc gccgccgcca ccccaacgac tacctcgcct taatgcaaag ccaaccgagt
     9061 gaagccgtcg aacgcaaaac cgttgccgcc gaagatttgc cgttcgaatt catgatgaac
     9121 gccctgcgcc tgaccgacgg cgtgcccgcc gcgatgttgc aggaacgcac gggcgtaccg
     9181 agtgccaaaa tcatggctca aatcgaaacg gcaaggcaaa aaggtttatt ggaaaccaac
     9241 cccgccgtgt tccgcccaac cgaaaaagga cgcttgtttt taaacgattt gctgcaatg
//
LOCUS       DAWEYF010000075         9264 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.075, whole genome shotgun sequence.
ACCESSION   DAWEYF010000075 DAWEYF010000000
VERSION     DAWEYF010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9264
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.075"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(45..3077)
                     /locus_tag="WGN93_001242"
     CDS             complement(45..3077)
                     /locus_tag="WGN93_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEZ0227148.1"
                     /translation="MFWIVMIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPTGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAICPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGSSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3242..3922
                     /locus_tag="WGN93_001243"
     CDS             3242..3922
                     /locus_tag="WGN93_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ0227149.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3951..4310
                     /locus_tag="WGN93_001244"
     CDS             3951..4310
                     /locus_tag="WGN93_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ0227150.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPASLSPATGNLFANWTGA
                     LLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGTAVK"
     gene            complement(4963..5499)
                     /locus_tag="WGN93_001245"
     CDS             complement(4963..5499)
                     /locus_tag="WGN93_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ0227151.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYTAD
                     SVRLLYSFYTAVGFCNEKMYLFEAESVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(5533..5889)
                     /gene="folB"
                     /locus_tag="WGN93_001246"
     CDS             complement(5533..5889)
                     /gene="folB"
                     /locus_tag="WGN93_001246"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ0227152.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGIPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            5945..6547
                     /gene="plsY"
                     /locus_tag="WGN93_001247"
     CDS             5945..6547
                     /gene="plsY"
                     /locus_tag="WGN93_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ0227153.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILLLLRHKSNILNLIKGKESKIGEKR"
     gene            6635..7480
                     /locus_tag="WGN93_001248"
     CDS             6635..7480
                     /locus_tag="WGN93_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ0227154.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     AVLIDPPYEEKQDYWRVTETLKSALKRFESGCYLIWYPCLSREESRKLPEELKKLVPD
                     NYLHAELHIHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            7729..8703
                     /locus_tag="WGN93_001249"
     CDS             7729..8703
                     /locus_tag="WGN93_001249"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ0227155.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNARQDILGIRPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(8862..9080)
                     /locus_tag="WGN93_001250"
     CDS             complement(8862..9080)
                     /locus_tag="WGN93_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ0227156.1"
                     /translation="MFPEYRDLISRLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         2153 a         2705 c         2156 g         2250 t
ORIGIN      
        1 gccgtctgaa acagtcttca gacggcattt ccatttgcaa aaaatcaagc attgtccaag
       61 gggacgagaa tcgtacggtt gccgttgtgt tccggtgcgg acacaatgcc ttccgcctcc
      121 atctggtcaa tcagacgcgc ggcgcggttg tagccgatac gcaaggcgcg ctgtacgccc
      181 gaaatactgg ctttgcgcgt tttcaggaca acggatacgg cttcatcata catcggatcg
      241 gtttcgccgt cgccgctgcg cccgatgccg ggcagctctt cgctgctgcc gccgctcaaa
      301 atatcgtcaa catagtccgg ctcgccaaac tgtttcaaat attcgaccac gcggtgcacc
      361 tcttcatccg aggcaaacgc gccgtgaacg cgctgcggat aggcagtacc cggcggcagg
      421 aacagcatat cgccctgacc gagcaggttt tccgcgccca tttggtcgag aatcgtgcgg
      481 ctgtcgattt tgctggacac ttggaacgcg atacgcgtcg ggatgttcgc cttaatcaga
      541 cccgtgatga catcgacgct ggggcgttgt gtggcaagga taagatggat gcctgccgcg
      601 cgggcttttt gggcgaggcg ggcaatcagt tcctcgattt tcttgcctgc cgtcatcatc
      661 aaatcggcaa actcatcgac cacgaccacg ataaacggca gtttttccaa aggttcggga
      721 tcgtcgggcg tgaggctgaa cggattgccg attttttctc cccttgctgc ggcttcggcg
      781 attttttgat tgaagcccgc aagattacgc acgcccataa agctcatcag gcggtagcgt
      841 ttttccattt cgttaacaca ccagttcagc gcgtttgccg ccagcttcat atcggtaacg
      901 acaggggcga gcaggtgcgg gatgccttcg taaatgctca attccagcat tttcggatcg
      961 atcataatca tacgcacgtc ttccggcgcg gctttgaaaa gcatagacag aatcatcgcg
     1021 ttgacaccca ccgatttgcc cgaaccggtc gtgccggcaa ccaacaaatg cggtgctttg
     1081 cccaagtcgg ttacgacggg ctgtccggtg atgtcctgac cgagcgcgag cgtcagcttg
     1141 gatttggatt cggcaaactc gggcgaattg aagatttcgc tcaggcgtat catttggcgt
     1201 ttcgggttcg gaagttccaa acccatacag gttttgccgg ggatggtttc gacaacgcgg
     1261 atggaagcca cgccgagcga acgcgccaag tctttttcca gatttagaac ggaattgccg
     1321 cgcacgccga catcgggttc gatttcataa cgcgtaatca cggggccgga ataagaatcg
     1381 acaaccttga ccttgacttt gaactccgcc aatttttctt cgatggtgat gctgttttcc
     1441 aacagttctt cttcggtttg cgtcgcctcg ggattgaaca gcggcggcag aagcaggtcg
     1501 gttgtcggca ggtgttcgta taccgcatcg gtttcttcag attggaacgc cccttcatcc
     1561 gcttccgtat ccgatacccg gcaggacggg cgttcagacg gcacatcttc aaacggacaa
     1621 atcgcctgac tgtcatgccc gaacgcttcg gtttccgaca gatattgccc gtttgaccgc
     1681 tctgccgcac cttcactgcc gtcatctgca atagcggcgg tttcctcctg ccaacctcca
     1741 ttcaaaacat catcggcaag atggtcggtt tcagcaatgc ggctgcgttg cgcctgctcg
     1801 aatcctgtcg gcggctcata ggtacggttg tagatttccg atacgggagg cggcggcgga
     1861 atatcgattg cgggcatggg aactttcggc acttcgggtg gttcgaccac ccaagcatcg
     1921 ggcgcagcag gttcttcaat atagatatcg gcagcttcat cataaaccgg accgccgtat
     1981 cccacagacg aaacggtttc cgtgaaaaca ttttcggttt cagacggcat ttcgacatcc
     2041 cgtttcccga caaccgtccg actttccgga atcaggcgcg aaatccgcgc ctccgcagaa
     2101 accgttgcct tgttcggttc tttcaaattg acggaaacgc ggcggcaggc atcgcggacg
     2161 gctgtgccgt ctgaaacgga ctgtccttgg gaaacatccg gggattttgc ctccgcctgc
     2221 cctgcatgac ggcggaacgg cgcattccgt gcattttcgg ctttgactgc agaaaaggca
     2281 gacggatgct gcttctcaaa atacggctca aatccgtaat ccgcagactc ggaaaacgct
     2341 tctttgtccg catcgaacat acgggaatac gtgcgttgaa gcacagggtc gtccaaaccg
     2401 ataatctgta gcccttccat cggggtatcg gacacgcgga ctttggggac cgctgtttcg
     2461 tttttctcaa atgcatcgat atagcgtttt ttcgtttccc ttaaagccgc gctgtttaaa
     2521 gcacgcgttg cttcttccaa agtgatttcc ttaaaaaccg gacggacggg cgaaatttcg
     2581 ctttcagacg gcatcaaccc ttcagcaata ctccggtcga atgggatgcg gcggttgtcg
     2641 attacggcag ttgcaatgtc ttccgtatcg gcagcctctt cctccgcagc ttctgcttct
     2701 tccgtttccg cttcttccgt cccgtttcca ctgtctgaat atccgtcgga tgcggtcgga
     2761 acatccgcac ggtttgcaga agcaggcgga acgggcctgt ccggttcgga ttcgtgcgcc
     2821 agatagtttc ggcagaaacg gacgacaccg acaaacagcc aatacactgc cgtcttgacg
     2881 gcatggaaaa gcatcagggc aagttcggga aaatcgggca taccgtcttt gatttcaggc
     2941 agctccgcct gtttttcccc tttcttttcc tgccacgcag aaacctcgcg catccactcg
     3001 cgttcggatt gtgcgcggac aaaaaacaag ccggcaagcg caagcaacaa aataacgatc
     3061 ataactatcc aaaacatatg ccgtttcccg caagacaaac gattaaacgg gtttatttta
     3121 acgtgtttcc atcccaaaaa aaacaaccgg tcggcaattc tgccgaaacc gattcggctt
     3181 tcggtttgcc cccgccgaca gtataatagc cgtcctttcc cttaatcttt gcggcattgc
     3241 catgattttc caaacagtct ggttttcaga tatggtactg tcggtttcgt ggattgtcct
     3301 tatcctgata ctggcagctt ccgcgccgtc ggcattccgc tcgcttgccc gctaccgttc
     3361 cgcccttcca ctgtgtaccg taattttttc cgcagcatgg tgtctgaacg cctctgccgg
     3421 cggcggacag cttgcacaga tgaactacca cctgctcgcc gtcaatctgg ttgcactgat
     3481 ggtgggcact tccgccgcct tttggcttgc cgcgctgctg atgctgccct actgcctgct
     3541 gtttgccggt tctgccggcg catatccgcc gaacgcttta gtgctgattc tgcccgcgct
     3601 tgccgtcaac cgcctgtcgc gtatgctggt caaccgcctg ccgcccaata ttttcatctt
     3661 tattttcgtc aacggctttc tcgcttccgc cgccggcatt ctgttgaccg ggctggtgct
     3721 gaccggtatt ttggatgctg caaacgcttt tccgtccgaa atattgtgga cgaccgccct
     3781 gcccgtcttt attttgctgg cgtgggcgga agccttcctc agcggcattt caactgccat
     3841 atttgttgca ctgaagcccc attggattaa cactttcgac gacaaccgct atcttaagtc
     3901 cgaccgcggc atatggcggt agccttcaga cggcatagac aggcaaaacc atgctttcca
     3961 acatcatccc cctttccatc ggtgcggcac tcggtgcaac ggcgcgttgg ctgctcaacc
     4021 tcgccgttcc cgcatcgttg tctcccgcca cgggcaacct gtttgccaac tggacgggcg
     4081 cgctgctcat cggcatcttt gccgaaaccg tcaaccatcc gcaatggaag ctgctgctga
     4141 ttaccggttt tctcggcagc ctgaccacgc tttccggatt ttcactggaa accgtaaccc
     4201 tgctccaatc gaatcgtcct gcttcagcac ttgccaatat tttcctgcac acggcaggtt
     4261 cgctgctgct gacttggctc gggctgaaga tagggacggc agtcaaataa ccgcaacaaa
     4321 ttgcctccct ttgttttgac ataatctata aattagcttc gcttgtttaa atactggctg
     4381 tgccaattat agtagattaa caaaaatcag gacaaggcga cgaagccgca gacagtacaa
     4441 atagtacgga accgattcac ttggtacttc agcaccttag agaatcgttc tctttgagct
     4501 aaggcgaggc aacgccgtac tggtttttgt taatccacta taccgttctc aaattcaaat
     4561 tgggctttta ggtctataac aaagaaaaag ccttggtagg ataaacctac caaggctttt
     4621 tcttaaaaaa acgctctatt accgtgccta aaaatgcaaa aaagtaaccg tcataaccct
     4681 tttgccaaaa tcaatatcat catccgatga atgaattgac ggtatataag aaagaattaa
     4741 taagctcata aaccggtaag aaaaatcagt aacaaagata ttcattatta accattttaa
     4801 aaattatcat gttcgtttgg gtaattatta tacccttttc cctcttatta ctaaagcacg
     4861 aatgacttta aaggacgcgc ccagagacaa gccgaaaagg catatctcat ccgccaaaca
     4921 aaatgcccac cgacttactc cggcaggcag ttcaacaccc tgtcaatcct tcatcagcca
     4981 gtattgcaaa ccgattaatg tcttgccgtc tttaatttca tcgtttgcca atgcctgacg
     5041 gacttcttct ttcgacatca atacggtttc cgtaatctcg tcttcgtcat tggcaagcgt
     5101 actgcccaaa cgcacgcttt ccgcttcgaa cagatacatt ttttcgttgc aaaaaccgac
     5161 cgccgtataa aaactgtaaa gcaggcgtac gctgtcggcg gtataaggcg tttcctccgc
     5221 caattctcgc agcgcacacg ctgccatatc ctcacccgcc acatccagct tgcccgcagg
     5281 aagttccaat gtcgcctgat ttgccgcata acgccactgc cgcaccaaaa cgaccttttc
     5341 atcatccgtt accgccaaca cgcacgccgc acccggatgg cggatgacga tacgttgccc
     5401 ttcattgccg ttgggcaacc tgaccttatc cctgctgatg ctgacgaaac cgccctcgta
     5461 aatggtttcg ccgcctaatt ttacttccct caaatccact tcatatctcc tttccgtttc
     5521 ctattatgcc gttcaatctt cacgcttgcc gcgctcgatt tccacgccaa cctcgcgcac
     5581 gccttctaaa atacccggct tgacgatttt cacgcgtacc cacaccgcgc cgaaatatcc
     5641 caaaaccaaa tcggcaatat attccgccaa cgcttccaaa agcaggaaat cctgttcttt
     5701 cagatgtcgg cgcaatgttt cgcatacctc ggcataatgc accgtattgg caatatcgtc
     5761 gtccgaaccc gctttctcgg gaatgccgat gtccaaatcg acaatcaggg tctgcaaccg
     5821 ttcgcgttcc cagccgtaca caccgatgag cgtatccgcc ttcatgccgt gcaaaaagat
     5881 tttatccata atccgccccg ttttttgcta aaataaccgc accattctaa gtaaagtacc
     5941 gcaaatgttc aacataccgg ctgttgccgt ttcctatctg atcggctcac tttctttcgc
     6001 cgtcatcgtt tccaagtatt acgggatgga cgacccgcgc acctatggtt cgggcaatcc
     6061 gggggcaacc aatgttttac gcagcggcaa aaaaaaggcg gccgcgctga cgctcttggg
     6121 cgatgccgcc aaaggtttgg ttgccgtttt gcttgcacgc gtgcttcaag aaccgctcgg
     6181 tttatccgac agcgcaatcg cggccgtcgc actcgccgcg ctggtcgggc atatgtggcc
     6241 ggtgtttttc ggatttaagg gcggcaaagg cgtggcaacg gcattgggcg tgcttctggc
     6301 actctctcct gcaactgcct tggtctgcgc gttgatttgg cttgtgatgg cattcggctt
     6361 caaggtgtcc tcccttgccg cattaaccgc cacaatcgcc gccccccttg ccgcactgtt
     6421 ttttatgccg catacttctt ggattttcgc aaccctcgca atcgccatat tgctgttgct
     6481 ccgccataag agcaacatcc tcaacctgat taaaggcaaa gaaagcaaaa tcggcgaaaa
     6541 acgctgattc ggcatttgtt ttccattacg tcatgccgtc tgaaaccatg ttcccgcgtt
     6601 cagacagcat ttccgcacaa acggctttca taccatgctc agttacagac acgcattcca
     6661 cgccggcaac cacgccgata tgctcaaaca ctttaccttg tttttagtgc tgcaatattt
     6721 caaccgcaaa gacaagccct actggtacat cgacacgcac ggcggcgcgg gtgtgtacaa
     6781 tctcgaaggc agcgaggcgc agaaagtcgg cgaataccgg caaggcatcg ccctgctccg
     6841 acaggcgcaa aacctgcctg ccgaactctc tgactttgcc gcgcacatac aaaaaatcct
     6901 gccctcgccc gaactttact gcggttctcc gtggctggca caatcgctga cccgcgtcgg
     6961 cgacaaatta cgcctgtttg agctgcaccc caccgacttt gtccatctgc aaaacaatat
     7021 gggcgaagca ggattgggca aacgcggaca agtgttgcgc gaagacggtt acaaagggct
     7081 gatttccctg ctgccgcccc cgccgcgccg tgccgccgtc ctcatcgacc cgccttacga
     7141 ggaaaaacag gactactggc gtgtaacgga aacgctgaaa tccgctttaa aacggtttga
     7201 gtccggctgt tatctcatct ggtatccctg cctaagccgc gaagaaagcc gcaagctgcc
     7261 cgaagaactg aaaaaactcg ttcccgacaa ctaccttcac gccgaactgc acatccacgc
     7321 gccgaaagcc gacggtttcg gtatgcacgg cagcggaatg ttcgtcatca atccgcccta
     7381 tctgttggcg gaacaattgg ctgcaaacct ccccgccctg acgcggctgc tggcgcaaga
     7441 cgaaggcgcg cgctacctgt tggacagcaa aatccgctga ccccgatgcc gtctgaaaca
     7501 acccttcaga cggcatctcc cgtcaaacaa acaaaaccgg acgctatacc ggcagtcggc
     7561 acttttaaga ataaatatcc cctcatccgc ctgccgcgtt ccgacttgcc ccatgccgtt
     7621 tttttacact acaatcccct agactatcct gcaaaacgca ccaaaggaat acgccacaat
     7681 aacctgccgc ctttcagacg gcacaaacct ttccgaaacg agcaaactat ggacacactg
     7741 acccgattcc tccccgaaca cctgcaacaa aaccagctgc ccgaagcact cggcggcgtt
     7801 ttactgtccg ttgtttccgc ctgcaccgaa atcaacgcca aagtccgcct cggcgcactg
     7861 gccggcgtat tgggtatggc gggcacgggc aatattcagg gcgaagacca aaaaaaactg
     7921 gatgttatcg ccaacaacat catgattgac acactcaaag ccaaccctgc cgttgccggt
     7981 ttggcaagcg aggaagaaga ctctttcgta agtgccggtg aaaacggacg ctatctcgtc
     8041 ctattcgacc ctttagacgg atcgtccaat attgatgtca acatttccgt cggtacaatt
     8101 ttctccatcc ttgaaaaacc cgaaggcgca ttggcaaccg aatcattcct tcaaacgggc
     8161 agacagcagc ttgccgcagg ctatatcctc tacgggcctc aaacccagct cgtattcaca
     8221 ttcggacacg gcgtatatat gttcacgctc aatgccgaaa acgaatttgt gctgaccaaa
     8281 gaaaaaccga aagtacccga aagtaccaaa gaatttgcca tcaatatgtc caaccgccgc
     8341 cactggctgc cccccgtcca acaatacatc gacgagctct tggcgggcga aaccggcacg
     8401 cgcggcaaaa actacaatat gcgctgggta gccagcatgg ttgccgaaat ccaccgcata
     8461 ctgatgcgcg ggggcgtgtt catgtatccg caagacaaac gcgacccgtc caaacccggc
     8521 aaactgcgcc tgatgtatga agccaatcct atggccctga tactcgaaca agccggcgca
     8581 tcggcaagca acgcccgtca ggacatactc ggcatccgtc ccgaaagcct gcaccagcgc
     8641 gtcgccgtca ttatgggcag cagcgaagaa gtggattacc tcaaccgcct gcattcaaaa
     8701 taaaaggcag cctgaccgat aaagaaaggc ggcagcgcgc atccgacgct gccgccgata
     8761 tttcgtttat agccttaaaa agatagaaaa ccacctttcc gaacggcaaa aatgccgtct
     8821 gaaaagtttt cagacggcat tttaaaaatt aaagcccgaa tttattttcc cgctgctttt
     8881 tgcaggatgg cgtacaactc gtctttcagt ttcaatttgg cttttttcag ctcatcgatg
     8941 gtttccgcac cgctggtaac cggattgttg accagaccgg taattttatc gtccagctcg
     9001 ttgtgttcgt cgaacagacg ggcgaagcgg gaattttcct gtttcaatct ggaaatcaaa
     9061 tcacggtatt ctgggaacat atcgctttcc tctcttggtt tacggttaaa aagtcaaact
     9121 gaatctttac attaattata acaaagataa tatttttatc cagtgtttta tcggatacgg
     9181 caaaattttc ttttaacacc gccgtccggt tgataaaaac gttgacaata tcacgcttta
     9241 cgcataaatt ttcagccttt ccta
//
LOCUS       DAWEYF010000076         9192 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.076, whole genome shotgun sequence.
ACCESSION   DAWEYF010000076 DAWEYF010000000
VERSION     DAWEYF010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.076"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(97..1116)
                     /gene="lepB"
                     /locus_tag="WGN93_001251"
     CDS             complement(97..1116)
                     /gene="lepB"
                     /locus_tag="WGN93_001251"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ0227157.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFHSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(1259..3052)
                     /gene="lepA"
                     /locus_tag="WGN93_001252"
     CDS             complement(1259..3052)
                     /gene="lepA"
                     /locus_tag="WGN93_001252"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ0227158.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(3195..3896)
                     /locus_tag="WGN93_001253"
     CDS             complement(3195..3896)
                     /locus_tag="WGN93_001253"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ0227159.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            4082..5194
                     /locus_tag="WGN93_001254"
     CDS             4082..5194
                     /locus_tag="WGN93_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ0227160.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            5228..6205
                     /locus_tag="WGN93_001255"
     CDS             5228..6205
                     /locus_tag="WGN93_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ0227161.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            6209..6559
                     /locus_tag="WGN93_001256"
     CDS             6209..6559
                     /locus_tag="WGN93_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HEZ0227162.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            6564..7343
                     /locus_tag="WGN93_001257"
     CDS             6564..7343
                     /locus_tag="WGN93_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ0227163.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFAIAEAHEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRYTAEHIAKLRNQTLEQVAAYTTENFYRLFQKVPDMRTV"
     gene            7369..7584
                     /locus_tag="WGN93_001258"
     CDS             7369..7584
                     /locus_tag="WGN93_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HEZ0227164.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYFRSQH"
     gene            7685..7996
                     /gene="grxD"
                     /locus_tag="WGN93_001259"
     CDS             7685..7996
                     /gene="grxD"
                     /locus_tag="WGN93_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ0227165.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            8102..8728
                     /gene="upp"
                     /locus_tag="WGN93_001260"
     CDS             8102..8728
                     /gene="upp"
                     /locus_tag="WGN93_001260"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ0227166.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLATELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            8751..9071
                     /locus_tag="WGN93_001261"
     CDS             8751..9071
                     /locus_tag="WGN93_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ0227167.1"
                     /translation="MNFQDYLATFSSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
BASE COUNT         2237 a         2373 c         2389 g         2193 t
ORIGIN      
        1 gtaggaaaat ccgacaacgt tagacccgcc tgcaaaggta aggaatagca aatgccgtct
       61 gaaactattt tcagacggca ttcttggctt cctggcctaa cggattgccg taccggccct
      121 gccgaaatcg ccgaagttca tcaaaatgaa cattgccttg ccgacaacca gcttgtcatc
      181 cacaaatccc cagtagcgag aatcggcact gttgtcgcgg ttgtcgccca tagcgaaata
      241 gcgtccttcg ggaactttgc acacgaaacc gctgccgtcg tcggcatatt ggcagtgttc
      301 caaaccgctt tgctctatgg aatatccgtt ttcagacata atatcggagg tatatttgcc
      361 caatacgggc agggaaacgg caggctgtcc ttcttttttc agaatattga aggatttgcc
      421 gtccaaaccg ctgtggaaca tatccgtatt gtggatttcg gatgggtcgg tgtcgtcggg
      481 ataacggtat gtgccgttag gaatatcgga agtgggtttg ccatttaccg tcaaaatctt
      541 atcccgatat tcgaccacat cgcccggaat gccgacaata cgcttgatgt aggtcatctc
      601 cggctgcaga ggataattaa aaacaacgac atcgccccgt tcgattttgc ctgtggggat
      661 aaatatattg tttaaaacgg gtacgcgcaa gccgtaggaa aatttgccga ccaaaatgaa
      721 atcgcccttg atcaggcccg ggcgcatgga gctggatgga atttggaacg gttcggcaat
      781 aaacgaccgg atgagaaaca ataccaaaac ggtagggaag aaactgccga aataatcgcc
      841 gaagtggctg ctttccgaga tttcgggatg agtcttcagg cggtatttgt atacccccca
      901 agccgtaccg cacaatacaa cgaaaatcag gaaaacggcg gtaaagctca taaacaggga
      961 caaagcggca aacacgccga ccgctgtcag gatataggcg tattcgaggc cggaactcca
     1021 ttcaccgttt tcctgccgct tcttgtcgct tttgaaataa aggatgatgc cggcaagcag
     1081 cgcggcagcc gcgcccgaca ttagcattgt gttcattgtt gttccttaat gcttaaaaac
     1141 ccgcctgtcc gtgcaaccgt tttaaggcgg caaattgcaa aatttgtttg cgggcgcgtg
     1201 cccctgaaat tagggcggtt tgaggggtgt tcccgacgcg ccgccctgtg tgccagagtt
     1261 atttgtcgct cacctgcaaa atcgccaaga acgcgctttg cggaatttcc acattgccca
     1321 cttgtttcat acggcgttta cctgcctttt gtttttcaag cagttttttc ttacgcgtaa
     1381 tatcgccgcc gtaacatttc gctaagacgt ttttacgcag tgctttgacg ttttcgcggg
     1441 cgataatctg gctgccgatg gcggcttgga cggcaatgtc gaacatttgg cgcggaatca
     1501 gctcgcgcat tttcgatgcc agctcgcggc ctcggtgaac cgcgctttga cggtgcacaa
     1561 tcaggcttaa tgcatcgact ttttcgccgt tgaccataat atccagctta atcaaatcag
     1621 acggttggaa ctctttgaaa tggtagtcca acgaagcata accgcgcgaa gtggatttga
     1681 gtttgtcaaa gaagtccatg acgacttcgt tcatgggcaa atcgtaagtc agcatcactt
     1741 ggcggcccat gtactgcata ttgacctgaa cgccgcgctt ttggttacac aaagtcatga
     1801 cgttgccgac gtattcctgc ggcacaagga tggtcgcggt aataatcggc tcgagtatgg
     1861 tttcgatgct gccgatgtcg ggcagtttgg acgggttttc aacttcgatt ttctcaccgt
     1921 ttttcaacac gacttcataa accaccgtcg gcgcggtggt aatcaaatcc atatcgaact
     1981 cgcgctccaa gcgttcctgc acgatttcca agtgcaacag acccaagaag ccgcaacgga
     2041 agccgaagcc caatgcctgg gaaacttcag gctcgaattt caacgaagcg tcgttaagct
     2101 gcaatttttc caaagcgtcg cgcaaggctt cgtagtcgtg gctttccacg ggataaagtc
     2161 cggcgaatac ttggctttgt acttcttgga agccgggcag cggctcagtg gcagggttgg
     2221 caaccagtgt aaccgtatcg ccgactttcg cctgacccaa ttcttttacg ccggtaatca
     2281 aaaagcccac ttcgccggct ttgagttctt gtttttgaac tgattttggt gtgaatacgc
     2341 ccagctgctc gacctgcgtt tccgccttgg tgctcataaa gcgcactttg tctttcagtt
     2401 tgatggtgcc gtttttcact cgaatcagca tgaccacgcc gacatagttg tcaaaccacg
     2461 aatcgacgat aaccgcttgc agcggcgcgt tttcgtcgcc ggtcggcgca gggattttgg
     2521 caacaatttc ttccaaaaca tcttccacgc cgataccgct tttggcggaa cactgtactg
     2581 caccgacggc atcgatgccg atgatgtctt cgatttcctg ttccacacgc tcggggtcgg
     2641 cggcgggcag gtcgattttg tttaaaacag gcacaacctc cacgcccaaa tcaatcgcgg
     2701 tgtaacagtt cgctacggtt tgcgcttcca cgccctgcga cgcgtcaacg accagaagcg
     2761 cgccttcgca agccgacagc gaacgggaaa cttcgtaaga gaagtcgacg tgtcccggcg
     2821 tgtcaatcaa attaagctga tacacctgcc cgtcgcgcgc tttatagttg agcgcggcgg
     2881 tttgcgcttt gatggtaatg ccgcgctctt tttcgatgtc catggaatcg agtacctgcg
     2941 tactcatttc gcgcaaatcc aaaccgccgc aatattggat gaagcggtcg gcaagcgtcg
     3001 atttgccgtg gtcgatgtgg gcaatgatgg agaaatttcg gatatttttc attagagttg
     3061 ttttgaatgt cggacagtgg gtttgggaaa tgccgtctga acaaacggcg ttgcgtccga
     3121 atatcgggtg caacgtggaa atagcccgat attctaacgg aaaaccgctg ttttggcatg
     3181 atttgataaa ggttttataa agatttgacg atttctgcca ccatttttgc agaacttgcc
     3241 gccgccgttt tcaaaaattc gtcaaagctg atgtctgcct tttcgtccgc cgaatcggaa
     3301 accgcgcgga tgatgacgaa aggcgtttcc aactgatgac aggtttgggc aatcgccgcc
     3361 gcttccattt ccactgcttt gactttgggg aagtgcttgc ggatttccgc cacgccttcg
     3421 ctgctgtgga cgaagcggtc gccgctgaca atcaggcctt gttctaccgc cgcgccttca
     3481 aacacttccg ccgcctgttt tgctttgccg accaagaggc cgtctgaaac aaatacggcg
     3541 ggcagttgcg gcacttgtcc ccaaacatag ccgaatgcgg ttacatcgac atcgtggtgc
     3601 gcgatttctg tgccgaccac gacatcgccg actttcaaac ccttgcccaa gccgcccgcg
     3661 ctgccggtgt tgataacgca gtccggtgcg aattgatgga taagccaagc cgttgcaacc
     3721 gccgcgttga ccttgccgat gccgctcaat gcaagcacca tgcgttttcc cgctaattcg
     3781 ccttcatagg cggcaaactt gccgaaagag acggctttga cattttccat catctcgcgc
     3841 aaaagctcga tttcttgttc cattgcgccg ataacggcta ctgttttcaa agacatattg
     3901 ctgacctgtt gtgaatttcg gatagaatgc ctgattatac acgctaacac ggcaggattg
     3961 agtggaggtg gtttgtccgt gccgtctgaa acggtttcag acggcacggc gggtttttgg
     4021 tagaatggga aggtacagat tgtttgaaga ttaggggacg aggatgttta ccgatgaaaa
     4081 tatgaccgca aaggaagaac tgttcgcatg gctgcgccat atgaacaaaa acaaaggttc
     4141 cgacctgttt gtgacgaccc atttcccgcc cgcaatgaag ctggacggca aaatcacccg
     4201 catcacggac gaaccgctga cggcggaaaa atgtatggaa atcgcctttt cgattatgag
     4261 tgcgaagcag gcggaagaat tttcatcgac caacgagtgc aacttcgcca tcagcctgcc
     4321 ggacaccagc cgcttccgcg tcaatgcgat gatacagcgc ggcgcgacgg cgttggtatt
     4381 ccgtgcgatt accagcaaga ttcccaagtt tgaaagcctg aacctgccgc cggtcttgaa
     4441 ggatgtcgcg ctgaaaaaac gcgggctggt tatttttgtc ggcggcaccg gctcgggcaa
     4501 atcgacttcg cttgcctcgc ttatcgatta ccgcaatgaa aattcgttcg gacatatcat
     4561 caccatcgaa gacccgatcg agtttgtcca cgaacacaaa aactgcatca tcacccagcg
     4621 cgaggtcggc gtggatacgg aaaactggat ggcggcgttg aaaaacacgc tgcgtcaggc
     4681 gccggatgtc atccttatcg gcgaaatccg cgaccgcgaa acgatggact acgccattgc
     4741 ctttgccgaa acggggcatt tgtgtatggc gacgctgcac gccaacagca ccaatcaggc
     4801 actcgaccgc atcatcaact ttttccccga ggagcggcgc gaacaattgc tgacggattt
     4861 gtcgctcaac cttcaggcgt ttatttcgca acgcctcgtt ccgcgagacg gcggcaaggg
     4921 cagggtggcg gcagtcgagg tgctgctcaa ttcgcccctg atttcggagt tgattcacaa
     4981 cggcaacatc catgaaatca aagaagtgat gaaaaaatcc actaccctgg gtatgcagac
     5041 cttcgatcaa cacctttacc aattgtatga aaaaggcgat atttccctgc aagaagcatt
     5101 gaaaaatgcc gattccgcac acgatttgcg tttggcggta cagttgcgca gccgccgcgc
     5161 gcaaagttcc agccccgatt tggaactgct ctgatggcgg tatggatttc cggacggatg
     5221 gtttgaaatg atttatccgt ggcataatga gcaatggcgg cagattgcgg aacattggga
     5281 gcgtcgtccc aatgcatggc tgtttgccgg caaaaaagat acggggaaaa ctacatttgc
     5341 ccgctttgcg gcgaaggcac tgttgtgcga aacccctgca ccgggctgca aaccctgtgg
     5401 cgaatgtatg tcctgccatc tgtttggaca gggaagccat cccgattttt acgaaatcac
     5461 ccccttgtcg gacgaacccg aaaacggacg caaactgttg cagatcaaaa tcgatgccgt
     5521 cagggaaatc atcgataatg tgtacctgac ttcggtacgg ggcggtttgc gcgtgattct
     5581 gattcatcct gcggaaagta tgaatgtcca agccgccaac agtttgttga aagtgttgga
     5641 agagccgccg ccacaagtgg tctttttgct ggtcagccac gcggcggaca aggttttacc
     5701 gaccattaaa agccgctgcc ggaagatggt tttgcccgcg ccttcccatg aagaggcatt
     5761 ggcatatctg cgtgaaaggg gtgtggcgga acctgaggaa cgtctggctt tccattccgg
     5821 agcgccgctg tttgatgagg cggacggtgt ccgtgcgttg cggattaaac tgttggatat
     5881 tttggcagaa ccaaggttgt tgaagatttt ggattacgcc gcgcttttcg ataaggaaaa
     5941 acttccgctc gccgtatttg tcgggtggat gcagaagtgg ctggtcgatt tgggattgtg
     6001 cctgcaacac atgaaacccg tctattatcc cgcttatgaa gacaggctgc ttcagacggt
     6061 atccggtttc cgtccgcgca atgtatttgc ggcggaggat atgctcaaac agcttgcccc
     6121 ctacgggttt catactttaa atgtcaaaat gcagatcgag catctgctca tcaactattt
     6181 ggaattgaag aaagagaacg ggtgaattat gtcagacgga caaaatattc cggcaaaaat
     6241 gatgtcgttg cagctgaaag acatgaatct gctgtacagc tcctacatgc cgtttttgga
     6301 acacggcggt ctgtttgtgc agaccaacga cgtattttcc atcggggacg atattctgct
     6361 tgccgtagaa atcctcaact tccccaaact gttcctgccg accaaagtcg cctggatcaa
     6421 tcctgcgcgt acttcctcca aacccaaagg ggtagggctg gcattcacaa aacacgaaaa
     6481 ctgcctgaaa gtcaaagatc agatcgaagt cgaactgggc aacacaatcg gcggcagcag
     6541 acctacgttt accatgtaac gccatgcata tcatcgattc gcactgccac ctcaattttg
     6601 aaggtttgaa agaacgcctg cccgaagttt tgtccaacat ggaagcaaac ggcgtggggc
     6661 aggcgctcgc catcagcgtc agcagggaaa gcttctccga agtctttgcc atcgccgaag
     6721 cgcacgaaca catctattgc accataggcg tacatcccga cagcaaggaa gccgaagaat
     6781 tttctattgc ggaaatggtt gccgcagccg cccatccgaa agtggtcggc attggcgaga
     6841 cgggcttgga ttattactgg tgcaaaggcg atttgtcctg gcagcacaaa cgctttgcag
     6901 accacatcga agcagccaat caaaccggac tgcccgttat cgtccatacg cgtgatgcgg
     6961 cggcggacac cttgtctatc ctgaaagaat gccgggttaa ttcgggcgtt atccactgtt
     7021 tttccgaaga catcggtttt gcccgtgcag caatggattt ggggctttat atttctttct
     7081 cgggaatcgt tacctttaaa aacgcaccct tggttcagga ggcggcgaaa tacgttccgg
     7141 acgaccgcat tttagtggaa accgatgcgc cgttcctcgc ccccgtaccc aagcgcggca
     7201 ggcagaacga accggctttc gtgcgttata ctgccgaaca tatcgccaaa ttgcggaacc
     7261 aaaccttgga acaggttgcg gcatacacga cggaaaactt ttaccggctg tttcaaaaag
     7321 tacccgatat gcggaccgtc tgaccctgta ccgacgataa ggaaaaccat gaaggcaatt
     7381 catccgtatg catgtccgcg ctgctgccgg ctgcctgcca acacgtttcg gacaggcatg
     7441 gcaaattccg cttccaaatt ctgcattgcc aaaggcggca gacgggaagt aaaaaaagac
     7501 gaaagcggcg gcggatatgc cctgtgccat ttgccggaca gcaggattgt cgaggagtgg
     7561 gaatatttcc gttcacaaca ttgatactgc gcgatatacg gcaaatattg tgggaagttt
     7621 ccgcttttgc gtataatgcg ccctacctga caaattttgt caactttatc aaaaggaata
     7681 agtgatggct tccatccacg accaaattaa agaagtagta acgacacacc gcgtcgtatt
     7741 gtttatgaaa ggtacgaagc agtttccgca atgcggtttc tcttcccgcg ccgtgcaaat
     7801 cctgaacgcg gcgggctgca ccgattacgt taccgtcaac gtattggaaa atcccgaagt
     7861 acgccaaggc attaaggaat acagcgactg gccgaccatc ccccaacttt atgtgaacgg
     7921 cgagtttgtc ggcggttcgg acatcctgat ggaaatgtat gaggcaggcg agctgcaaga
     7981 gctgctgaaa gcctgatgga ttcggcaatg ccgtctgaac gtgtttcaga cggcattttc
     8041 ttttccggca aatcaaaaaa aagtataatg gcgcgtctca aaatcacact ggaacaccgc
     8101 gatgaacgtt aatgttatca accatccgct cgtccgccac aaattaaccc tgatgaggga
     8161 ggcggattgc agcacctaca aattccggac gcttgccacc gagctggcgc gcctgatggc
     8221 atacgaggca agccgtgatt ttgaaatcga aaaatacctt atcgacggat ggtgcggtca
     8281 gattgaaggc gatcgcatca agggcaaaac attgaccgtc gttcccatcc tgcgtgcagg
     8341 tttgggtatg cttgacggcg tactcgacct gattccgact gccaaaatca gcgtagtcgg
     8401 actgcagcgc gacgaggaaa cgctgaaacc cgtttcctac ttcgagaaat tcgtggacag
     8461 catggacgaa cgtcctgccc tgattatcga cccgatgctg gcgacgggcg gttcgatggt
     8521 tgccaccatc gaccttttga aagccaaggg ctgcaaaaac atcaaggcac tggtgctggt
     8581 tgccgcgccc gagggtgtga aggcggtcaa cgacgcgcat cccgacgtta cgatttacac
     8641 cgccgcgctc gacagccact tgaacgagaa cggctacatc atccccggct tgggcgatgc
     8701 gggcgacaag attttcggca cacgctaact gactgatttt cggatttgat atgaatttcc
     8761 aagactatct cgccacattt tcttcaatcg accatctggg cggtttggac gttcaggatg
     8821 ccgacggcaa aacggttcac cacattcccg ccgttcaggg taagctcggt tcgctcaagc
     8881 tgtacaatgc tttggcagaa cgttttgacg gaaaattgga caaagaagcg gcagaacagg
     8941 gtttgatatg gtttgccgaa cacgttgccg acgcgcgcgc ccatcccggc aagcatccca
     9001 atatcgacct gcttgaaaaa gttgtgcaaa gcggcgaaac cttgctgctc aagccgcttg
     9061 ccgcgcaata attttcgacc atgccgtctg aaatccgttt cagacggcat tttgtcggaa
     9121 agaagaccgt aaaacgggca ttttcttttc tatttcagga tacgggcaat gatgtttcaa
     9181 cacacaggac ga
//
LOCUS       DAWEYF010000077         9077 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.077, whole genome shotgun sequence.
ACCESSION   DAWEYF010000077 DAWEYF010000000
VERSION     DAWEYF010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9077
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.077"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            214..993
                     /gene="pgeF"
                     /locus_tag="WGN93_001262"
     CDS             214..993
                     /gene="pgeF"
                     /locus_tag="WGN93_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ0227168.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAEALGGTPDADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            1045..1524
                     /locus_tag="WGN93_001263"
     CDS             1045..1524
                     /locus_tag="WGN93_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227169.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1526..2524
                     /locus_tag="WGN93_001264"
     CDS             1526..2524
                     /locus_tag="WGN93_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ0227170.1"
                     /translation="MAAHIGHIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVLRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSVQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            2645..3064
                     /locus_tag="WGN93_001265"
     CDS             2645..3064
                     /locus_tag="WGN93_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227171.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3140..3655
                     /locus_tag="WGN93_001266"
     CDS             3140..3655
                     /locus_tag="WGN93_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ0227172.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAVGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3739..4623)
                     /locus_tag="WGN93_001267"
     CDS             complement(3739..4623)
                     /locus_tag="WGN93_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ0227173.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRHLESGIREKISSHLARGKVECKIQIQDTENGNQSLELNRDLVGQLAEINKDLR
                     KHHDLAKLGVADILRFPGVLASQRENTDALAKVIADLTDSALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIGALSEIFPALVEAHKEKIRARLAEAVGSIDNDRLQQEFALFVQKS
                     DVDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            4902..5048
                     /locus_tag="WGN93_001268"
     CDS             4902..5048
                     /locus_tag="WGN93_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227174.1"
                     /translation="MLIHYINSANLSEKQLMRQCLVHVCFLISAIAMVWTDKIVYGTT
                     HKPH"
     gene            complement(5107..5970)
                     /gene="rpoH"
                     /locus_tag="WGN93_001269"
     CDS             complement(5107..5970)
                     /gene="rpoH"
                     /locus_tag="WGN93_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ0227175.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(6234..7772)
                     /gene="lnt"
                     /locus_tag="WGN93_001270"
     CDS             complement(6234..7772)
                     /gene="lnt"
                     /locus_tag="WGN93_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ0227176.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            complement(7841..8209)
                     /locus_tag="WGN93_001271"
     CDS             complement(7841..8209)
                     /locus_tag="WGN93_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ0227177.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            complement(8109..8567)
                     /locus_tag="WGN93_001272"
                     /pseudo
     CDS             complement(8109..8567)
                     /locus_tag="WGN93_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            8763..8999
                     /locus_tag="WGN93_001273"
                     /pseudo
     CDS             8763..8999
                     /locus_tag="WGN93_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
BASE COUNT         1992 a         2261 c         2674 g         2150 t
ORIGIN      
        1 gccgtactgg tttttgttaa tccactatat aaagctcgga gaaggtatat aaggacatca
       61 ttcctgcacc ggcaagaatc cgaacccgaa cgtttgaaaa caatcccgaa tctccgaatt
      121 cccgcctgtg cgggaatgac gaaaaaacaa gcatccattt gccccgaagg cagttaatca
      181 accctttccg ccacacacct attccaatat ccaatgaaaa ccatcacaga aaccctaaat
      241 ctcgccccga aaggcaaaaa cttcctgacc gccgattggc ccgcgcccgc caatgtgaaa
      301 accctgatta ccacgcgcaa cggcggcgtg agccaaggtg cgtatcagag tttgaacctc
      361 ggtacgcacg tcggcgacaa tcccgaagcc gtgcgccgca accgcgaaat cgtgcaacag
      421 caggtcggat tgcccgttgc ctacctcaat caaatccaca gtaccgtcgt cgtcaatgct
      481 gccgaagctt tgggaggcac acccgatgcg gacgcttccg tagacgacac gggcaaagtt
      541 gcctgtgctg tcatgactgc cgactgtctg cccgttctat tttgcgacag ggcgggtacg
      601 gcggttgccg ccgcacacgc gggctggcgc ggtttggcgg gcggcgtatt gcaaaacacc
      661 attgccgcga tgaaggttcc acccgtcgaa atgatggcgt atctcggtcc cgccatcagt
      721 gcggatgcgt ttgaagtcgg acaggatgtg tttgatgcgt tctgcacgcc catgcccgaa
      781 gccgccgccg catttgaagg cataggcggc ggcaaattcc ttgccgacct ttacgcgctc
      841 gcccgcctga ttctgaagcg cgaaggcgtg ggcggcgtat atggcggcac gcattgtacg
      901 gttttggaac gggatacttt cttttcctac cgccgcgacg gagcgacagg gcgtatggcg
      961 agcctgattt ggctggacgg caatgccgtc tgaacacgcc gctgatataa tctaccgact
     1021 ttgtgctttt gagaaaggca agccatgaac aaactgtttc ttactgccgc agtgctgatg
     1081 ctgggcgcgt gcggtttcca cctgaaaggt gcagacggca tttctccgcc gctgacctac
     1141 cggagctggc acatcgaagg cggacaggca ttgcagtttc ctttggaaac cgcgctgtat
     1201 caggcttcgg gcagggtgga cgatgctgcc ggcgcgcaga tgaccctgcg tatagacagc
     1261 gtttcccaaa acaaggaaac ctacaccgtt acccgtgcgg cagttatcaa cgaatatctt
     1321 ttaatcttga cggttgaagc gcaggtattg aaacgcggcg agccggtcgg caaaccgatg
     1381 accgtgtccg tccgccgcgt ccttgcttat gccgacaacg agatcttggg caaacaggaa
     1441 gaggaagcgg cattgtgggc ggaaatgcgg caggatgccg ccgaacagat tgtccgccgc
     1501 ctgacctttc tgaaggcgga atgacgtggc ggcacatatc ggacacattg atacggacgc
     1561 gcctttgaaa cccctgtacg tcatccacgg cgaggaagaa ctgttgcgta tcgaggcatt
     1621 ggacgcattg agggcggcgg cgaagaaaca aggttacctt aatcgggaag tttatacggc
     1681 agacaatgcc ttcgattgga acgaactgtt gcaaaccgca ggcagtgcgg gtctgtttgc
     1741 cgatttgaag ctgttggaac tgcatatccc caacggaaaa cccggcaaaa ccggcggcga
     1801 ggcgttgcag gattttgccg cccgcctgcc ggaagatacg gtaacgctgg ttttgctgcc
     1861 caaactggag aaaacccagc tccagtccaa atggtttgcc gcattggcgg caaaggggga
     1921 agtgtgggaa gccaaaccgg tcggcgcggc ggctttgccc caatggatac gcggacggct
     1981 ggacaaaatc ggtttgggta tcggggcaga cgcattggca ctgtttgccg agcgcgtgga
     2041 aggcaatctg ttggcggcgc gtcaggaaat cgacaagctc gggctgctgt atccgaaagg
     2101 gcataccgtc aatatcgatg aggcgcaaac cgccgttgcc aacgtcgccc gcttcgacgc
     2161 gttccaactg gcaggcgcgt ggatgaaggg cgatgtcctg cgcgtatgca ggcttttgga
     2221 cggattgcgg gaagagggcg aagaaccggt gctgttgctg tgggcggttg ccgaagacgt
     2281 gcggacgctg atccggcttg ctgccgccct gaagcagggg cagagtgtcc aatccgtacg
     2341 caacagtctc agactttggg gtgaaaagca gacgctcgca ccgcttgcag tcaagcggat
     2401 ttccgtcgtc cgcctgcttg acgcgctcaa aacctgcgcc caaatcgacc gaatcatcaa
     2461 aggtgcggaa gacggcgacg catggacggt attcaaacgg cttgtcgtgt cgctggcgga
     2521 ataaagcggt aatccccaaa atccgaaaat actgtaaaat accgttaatc ctgaaaagta
     2581 ttcaccaatc cgtccgaaaa catttcagac ggcacgacca cctcaataaa ggaacattaa
     2641 ccctatggac aataagacca aactgcgctt gggcggcctg attttactga ccaccgccgt
     2701 tttaagcctc attatcgtat tgattgtcga ctcctggccg cttgccatcc tgcttgccgc
     2761 cgtcatcgtc gccgccgctg cgggcggttt tgtttggaca tcccgccgac agcaacgcca
     2821 gtttatcgaa cgcctgaaaa aattcgacat cgatcccgaa aaaggcagaa tcaacgaggc
     2881 aaacctgcgc cgtatgtacc acagcggcgg acaacaccag aaagatgcga ttaccctgat
     2941 ctgcctgtcg caaaaatgtt cggtggacga ggcgcacgct atgttcaaaa aacgcccgac
     3001 acgtcaggaa atcaatcaaa tggcggcaaa acagtcgcgc ggtcagaaac gtccgcaccg
     3061 ttaaccgccg caaggcatct ttgcataaat gccgtctgaa gcctgttggc gtttcagacg
     3121 gcatattctg attgaaaaga tgatgacact gaaaaccgcc ccgctcaaac gccgctttgc
     3181 cgccatgctg tacgaaatgc tgctggtcgg tgcggcaacc tgtttggcag cattgtttgc
     3241 cggtattgcc gccatttttc tgaatcccgt ttctatcgcg gtttctgcat tggtaacgag
     3301 tatcctgata atgggatcat ggtggcttta ttttcgcgcc aactggcacg gtcaggggca
     3361 gaccttggcg atgaggacat ggaaaatcgg cttgtgcgac cttaacggca tacagccgtc
     3421 tttgcacctg ctgcgcctgc gctttatttg ggcgtgcata ttcatcgtct tcattcctat
     3481 gcttgcttat gccggattgc gccacttcct cggcattccg cccaagggcg cggtcggtgc
     3541 ggcattgatt tggctgattt taccgtgggg gttcgcactg ctgaatcccg atcggcagtt
     3601 tctgtatgat tttcttgcag gaacaagatt ggtggcggtc aaaggaaagc cttaagcctt
     3661 tataccgcaa aggtttcaac ctgaaaaaat gccgtctgaa agggctttca gacggcattt
     3721 gcttatcggg gaaaccgatt attcgatatt ctgcacctgt tcgcgcatct gttcgatcag
     3781 gactttcagc tcgaccgagg cttgggtgca ttcggcggca atggatttgc tgcccaaagt
     3841 gttggcttcg cggtttaatt cctgcatcag gaagtccagc cgttttccgc tgctgccttt
     3901 gtgttcggta acgatacggc gcacttcggc aatgtgggtg cgcaggcggc tgaattcttc
     3961 atcgacatcg gatttttgga caaacagggc aaactcttgt tgcaggcggt cgttgtcgat
     4021 gctgccgacg gcttcggcaa ggcgggcgcg gattttttct ttatgcgctt ccactagcgc
     4081 ggggaagatt tcgctcaatg ccccgatgat ttcttccata gactcgaggc gttgcagcag
     4141 gtgttcgccc aattttttcc cttcgcgtcg gcgtgcggcg gtaaagtctt tcagtgccga
     4201 atcggtcaaa tcggcaataa cctttgccaa tgcgtccgta ttttcccttt ggcttgccaa
     4261 tacgccgggg aaacgcagga tgtcggcaac gcccagtttt gccaaatcgt gatgcttgcg
     4321 gaggtctttg ttgatttcgg caagctgtcc gaccagatcg cgattcagtt ccaaagactg
     4381 attgccgttt tccgtatctt gaatttggat tttgcattcg actttgccgc gtgccagatg
     4441 ggatgaaatt ttctcgcgga taccgctttc caaatggcgc aaatcatccg gcatcctgat
     4501 ttgaatgtcc aaaaagcggt ggttgacggc gcggatgtcg aggttgatgc gtttgctgcc
     4561 gcattccgcc gccgcgttgg caaagccggt catgctgtgg atgtggatat ttccgctgct
     4621 catgtcgttc tccgaagccc gttaaaatgg aatcaatata tcacatctgt atggcggcaa
     4681 gcgttttcgg gtgtgaaaaa ttgaagattt tgcagcggca gattggaatc acgcgctttt
     4741 gttgctgcaa ggaagggaaa tgtatagtgg attaaccaaa accagtacgg cgttgcctcg
     4801 ccttagctca aagagaacga ttctctaagg tgttgaagca ccaagtgaat cggttccgta
     4861 cgatttgtac tgtctgcggc ttcgccgcct tgtcctgatt tttgttaatc cactatatca
     4921 attccgccaa tctgtcggaa aagcagctga tgcggcagtg tctggtgcat gtctgctttt
     4981 tgatttcggc gattgcgatg gtttggacgg ataaaatcgt gtacggcacg acgcacaaac
     5041 cgcattgatg tttaccaaat aaaatacccg acaaaacaat ttgtcgggta ttttattgcg
     5101 tatatttcaa accgcttcgg cttcttcggt caggaaacca cgcagtttct gcatggcttt
     5161 tgcttcgatt tggcggatgc gttcggcaga tacgccgtat tcggcggcaa gctggtgcag
     5221 cgtcagcccg ccgtcgtctt gaagccagcg gctttccaca atacggcggc tcctgtcatc
     5281 cagttgcgcc aaagcgtttt gtaaaccttc tgtttgcagg gcgtaatgcg cctgtttcga
     5341 tagttgtcgg ctcggttcgg aatcgtggtc ggcaagccag tcgatggggg cgaaactgtc
     5401 ctcgtcgtcg ctgttgtctg ccatgatggc gatgtcgtgt cccgtcatgc gctgttccat
     5461 ttccagaact tcggaaagtt tgacacccaa atcgtcggcg atgtcttgtg cctctttggg
     5521 agacagggcg ttgaggtttt tacgcatact gcgtaaattg aaaaacagct tgcgttgcgg
     5581 tttggtggtg gcaacgcgga caaggcgcca gttcctcagg atgaattcgt gaatttccgc
     5641 tttaatccaa tgcacggcaa atgaaaacag gcgtgcacct ctaccgggct cgtagcgttt
     5701 gaccgccttc atcagtccga tattgccttc ctgaatcagg tctgcctgat tcagcccgta
     5761 gccgtcatag ccgcgcgcga tggaaacgac gacgcgcagg tgggacagga tgagttgttt
     5821 ggcggcgttg aggtcgccct ttatccggcg ttcggcgagg cgggtttctt cttcctggga
     5881 cagcatcggg atgctgttga cggtgtggat gtattgttcg aggctgccgt tgccgctttg
     5941 gatggcgggt aatgcgaaag cgttattcat ttggggcatt tcctttcggc tgaaactgcg
     6001 tatcggcggt ttgctgtgtt gggatgcagt atatcactgc ttggcttgta ttttgtatgt
     6061 ttggcaggag atatgcgcta aggtttgaaa gacaggaaaa ttttgtaagg caggtttgat
     6121 tgattttgta aacctgatgg ctcaatccga tttcggaatt atattacata cgtagttgta
     6181 tgtaaacagc cggtttgaaa aaagacagcc cgtccggacg ggctgtgcag gtatcagtgt
     6241 tctttgtttc ggaagatgaa aagaatcagt gcggctaggg tcaatatgcc catcaaccac
     6301 catgaactgc cggttttcat atagggtgtt tcgccgacat agcctttgat gtgtccttcc
     6361 aatacggttt ccgtatcggg ttgggcttgg gcgatgatgt tgcctttggg ggagatgatg
     6421 gcggttgcgc cggtgttggt ggcacggacc atatagcgtc cgagttccat agcccgtgcc
     6481 tgcgattgtt ggaggtgctg gtacatggcg ttggattttc cgtaccacgc catattgctg
     6541 gcattggcaa gcagggtggc atctttggcg gcggcaatca gttcgtcgcc gaatccgtct
     6601 tcgtaacaga tgttgaaggc gattttttgg tttttcatca gcagggcgga ttgcttaccg
     6661 ccgcctttgc ggaagtcgga aaggggcata ttcatcattt tgtaaagcgg cgtggtcagg
     6721 aagggcagcg gtttgtattc gccgaagggg acgaggtggt ttttggcgta gtaggggatg
     6781 ccgtcctgat tgttttcctg ataaccggtc aggttgatga cggcgttttc gtaaccgttg
     6841 ccgtccgaag tgtattggct gatgccgacg gcgagcgcgc tgccgttgtt ttgcgcctgt
     6901 tcggcaaatt ttgccagtat gttttccggc aggttttggc gcataacggg gatggcggtt
     6961 tcgggcagga tgacgatgtc ggcagtggtt ttgccgacct gttcgtaata tttctgtatg
     7021 gtcgggatga cttggtcttc acgccatttg agggtttggt cgatgttgcc ttgaagcagg
     7081 gcgacggtgc tgcggctgcc gtcggggcgg gtgaagtcgg tttgtcgggc ggtgtagcct
     7141 gcggcaagca gggcggcaat caggataatt ggaagcaggc gtttgcccga acgtgcggtg
     7201 ttatcactcg ccaaaaccag ccagacaccg agaaaggcgg ttgccagtgt aaccatgtgg
     7261 atgccgccca atggggcaaa gccggcgagc gggctgtccg gggtgatttg ggagtagccg
     7321 attgcgcccc agccgaatcc ggtcaggaaa cgttcgcggg caaactcggt cagtgtccac
     7381 aggatgggca gtaccaaacc gatttttatg ccccgaggca gggtaaattt tttccacagc
     7441 cagaaacaca gtgccggata aagggcaagg taggcgggga gtaggaaggt cagcggtacg
     7501 gcatagaggt cgggcaggcc ggaaacgtcg tgcagggcgg tgtgtatcca gtagaactgt
     7561 gtcgtgtatg cggtcaggcc gaacaggtag gcggaagaga cagcaaaacg cggacgcagt
     7621 tcgatgaggc ggacgaaggc accgaaaatc aagggcatca gccaaaagtg gtagtagggt
     7681 gcgaaggtaa agggggtggc ggcggcaaaa aggatgagca aaggccagta gagggcgggg
     7741 tgctgccagt atttgtccag tttggaaacc atattcatct gtctgttcgg aagataccgt
     7801 ctgaacatct ttcaaacggc atcggtattt gaaaaagaaa tcaatgcctg ccgaaacgat
     7861 tcatcagcgg caaggcgggg gcgcaggcaa tcgaaccgga aagcagcccg acaacgaggt
     7921 tggcgaagta ctccgcccag ccagcgtccc agtgttgcgc gtgcaggaaa tcgtgcagaa
     7981 ggccgaggtt gtgggcgacc agtacgccgc cgataagaaa catggcaagc gtgccgacca
     8041 cgctcaaacc gcgcataaag caaggcataa aggcagtcag catttgcccc aaactgcgcg
     8101 aaaaggtttg tgggcggcgc atcagcagca tgcctaagtc gtcgagtttg acgatgacgg
     8161 caacgattcc gtacaccaaa acagtcatgc cgatgccgat tgccgccatt acgagcatgc
     8221 gcgtcatgtc ggtgcagaaa cttgtgcagc agcttttcta cgccttcaaa gcacagataa
     8281 atgccgcctg ccgtcaaaag cggcgtaatg agttgcggca ggaaggcgga aagcagcagg
     8341 gccgcaggca ccaaaaccgg cttgttggaa aaagaacctt tcgccatcga ccaaacaatc
     8401 ggcaactcgc gttctgccga tacgcccgta acacggttgg cattgggtgc caaatcgtcg
     8461 ccgaccacgc cggcggtttt ctttgcggcg gctttggtca tcagggcaac atcgtccaaa
     8521 acggcggtga tgtcgtccgg cagggtaaat agtgaggcaa atgccattaa agaatcctga
     8581 aatgcggcgc aaagtccgac attatatagg agaacgcgga tttgggcggt ttcaggcggc
     8641 atgaaacagg aaaatgccgt ctgaacgctg tggcggacgt gaagtaaagt ttcgtgaaaa
     8701 gaaaatgccg tgttacagtc tttcgatttt aatttaatga attttaaggg agaatcgtta
     8761 gcgtggattg gatgggcagt ctgttcctgc cgggtggcgc actgttgttt ctgagcgtgg
     8821 tttcgaccac tttacccgca cgtttgggaa tgcctttgct gctggtttct cccgccggcg
     8881 tgttggacgg ggcggcggaa gccttggcga ttgcggcgtt cctgatgctg gtcgcgcgtc
     8941 cgccggcagt gttcggcggt ttgtggaaat tcaattacag cctgcgtgaa aaggcgtata
     9001 gccgaatcga aatgcagtcc gacaccgtgc ttcaggcggg gatttggcgt ggtacatcct
     9061 gcccgacggc aaggtcg
//
LOCUS       DAWEYF010000078         9038 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.078, whole genome shotgun sequence.
ACCESSION   DAWEYF010000078 DAWEYF010000000
VERSION     DAWEYF010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9038
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.078"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(120..1337)
                     /locus_tag="WGN93_001274"
     CDS             complement(120..1337)
                     /locus_tag="WGN93_001274"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ0227178.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVEAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEAHRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1539..2267)
                     /gene="rph"
                     /locus_tag="WGN93_001275"
     CDS             complement(1539..2267)
                     /gene="rph"
                     /locus_tag="WGN93_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ0227179.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2349..2813)
                     /locus_tag="WGN93_001276"
     CDS             complement(2349..2813)
                     /locus_tag="WGN93_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ0227180.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNSARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3030..3806
                     /locus_tag="WGN93_001277"
     CDS             3030..3806
                     /locus_tag="WGN93_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ0227181.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMATYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKAKMRVPCVFSTENITPPQSGVAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIAGKK"
     gene            3944..4471
                     /locus_tag="WGN93_001278"
     CDS             3944..4471
                     /locus_tag="WGN93_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227182.1"
                     /translation="MEFVNNLVIFSFLLLMLIPIFFVVYGIYHKIRYRKIYILRISFT
                     LLVVILCSMYYIYCRYLDQQKVAYYCIDEQCISIVHLYKDYGINSPTYARIYAGKILF
                     RFQVRAKNYAELLMEDDISISKKILGNKFIIYGSLPVIYGNVDNIEVKEATGYIDRAS
                     TDYIVSRNLKFRHLY"
     gene            4642..5496
                     /locus_tag="WGN93_001279"
     CDS             4642..5496
                     /locus_tag="WGN93_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ0227183.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFISLLELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5537..6745
                     /gene="pncB"
                     /locus_tag="WGN93_001280"
     CDS             5537..6745
                     /gene="pncB"
                     /locus_tag="WGN93_001280"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ0227184.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDDPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6837..8555
                     /gene="argS"
                     /locus_tag="WGN93_001281"
     CDS             6837..8555
                     /gene="argS"
                     /locus_tag="WGN93_001281"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ0227185.1"
                     /translation="MNLHQTVEREAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINLRLRPDFLAQNIQTALNDT
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEAPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDADAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
BASE COUNT         2175 a         2498 c         2244 g         2121 t
ORIGIN      
        1 tttaatccac tatatttttt gttccaaagt caaaatatgc cgtccgaaca ttcgggcggc
       61 agacaaaacg gcactgcccg ataaaggcag tgccgttgtc cgtttcaaac cgtgaaacat
      121 cagcccaaat taaaggcttt atgcaatacc ctggttgcca gttccatgta tttttcatca
      181 atcaatacgg aaactttgat ttcggaggtg gaaatcattt ggatgttgat accctcttcg
      241 gcgagcgtgc ggaagatttt ggcggctaca ccgacgtgcg aacgcatacc caaaccgact
      301 gcggagactt tgcatacggt gtcgtcgcca tcaatagaag ccgcgccgat actgtcttgg
      361 cgttccgaca ggatttccaa agtctgcttg taatcgccgc gcggtacggt aaaggaaaaa
      421 tcggttgtgc cttcgctgcc gacattttgg ataatcatat cgacttcaat gttggcatcg
      481 gcaaccgcgc ctaaaatctg ataggcaacg ccgggtttgt cgggtacgcc gcgcacgttg
      541 atgcgggctt ggtttttatc gaatgcgata ccggttacgg cagctctttc catgttgtcg
      601 tcctcttcaa aggtaattaa ggtgccattg ccgccgtctt gcaggctgct cagtacgcgc
      661 aggcgcactt tgtattttcc ggcgaattct actgaacgga tttgcaaaac tttcgaaccg
      721 aggcttgcca gttcgatcat ttcttcaaat gtaaccgtat ccatgcggtg cgcttcgggt
      781 acgacgcggg ggtcggttgt gtaaacgccg tccacgtcgg tatagatttg gcattcgtcc
      841 gctttgaggg ctgcggcaag cgcaacggcg gaagtgtcgg aaccgccgcg tccgagcgtg
      901 gaaatatcgc cttcactgct gatgccttgg aagccggcaa cgatgacgac tttgccggcg
      961 gtaaggtcgg cacgcatttt ttcgtcatca atgctttcga tgcgggcttt ggtgtgggcg
     1021 gtatcggttt tgagggcgac ctgccagccg gtgtagcttt tggcttccac gccgatgtct
     1081 ttcaatgcca tcgccaaaag accgatggtg acttgttcgc cggtggacaa aaccacgtcc
     1141 aattcgcgcg gatcgggatg ctcctgcatt tcgtgcgcca acgcgaccag gcggttggtt
     1201 tcaccgctca tggcggatac gacgacgacg atgtcgtgtc cttcggcgcg ggctttggcg
     1261 acacgtttgg ccacgttttt aatgcgttcg ggcgagccta cggatgtgcc gccgtatttg
     1321 tgtacgatta acgccatgtt tcgtgctttc ttgtgtggga ttggtcgggc agcatggttt
     1381 gctggaaaag cggctattat tactattttt tacatgaagt tcaagaacgg actgcgcttt
     1441 cccgcctgcc gtttgacagc ggtcagcgaa aaacctgttc tttcagattg ttgacaaaat
     1501 gccgtctgaa cggttttcag acggcatccg gacgacaatc aggcggcgga caacgcattt
     1561 tgctggtgtt gcagcagttc gcctatgcct ttttgcgcca gtgcaaccag tttgcccaat
     1621 tcgtccaaac tgaacggcgc gtcttccgcc gtaccttgga tttcgatgat ttttcccgat
     1681 gcggtcatga cgatattcac atcactgtcg caaccggagt cttcgggata atccaaatcc
     1741 aaaagcggca cgccgttcac tacgcctact gacacagcgg caacggcttc gcggatgggg
     1801 ttttcactca aaatgccgtc tgaaaccagt ttgccgacgg cgatttgcag cgcgacaaac
     1861 gcaccggtaa tcgaagccgt gcgcgtaccg ccatctgcct gaatcacatc gcagtcaatc
     1921 aagatttgtc gttcgccgag tttttccata tccacgaccg cgcgtagcga acgcccgata
     1981 aggcgttgga tttcttgtgt gcgcccggac tgtttgcccg ccgaagcttc gcggcgcatc
     2041 cgggaagcag ttgaggcagg cagcatcccg tattccgccg ttacccagcc ttggttttta
     2101 ccgcgcagaa acggcgggac gttttcatct atggaagcgg tacaaatcac tttggtattg
     2161 ccgcattcaa taaggcacga accgtccgta tgcggcagga aatgaggggt gattttgata
     2221 tcgcgcaggc tgtcggcggc gcgcgagatg cggatgtaat caggcatact gccctcccgt
     2281 taaaaacaga taaattaaaa agccttaaat atgaaaaatc acatttaagg ccttcaaact
     2341 gaaaatttct acgcctcttc ggctttgctg cggataatca aaagcggcag gtggctttgg
     2401 cgcattaccg tttcggcaaa actgcccatt aaaaggtgca tcagcccggt acgtccgtgc
     2461 gtacccaaca ccagcaggtc ggcaccgttt tcatcggcat aatcaaccaa atcctgcgcc
     2521 atttcacgcg cacccttatt ggcaaccagc aggtgtttga cggtattttc cacacccagt
     2581 tcccgggcgg tgcgctcggc ggcatccaaa acttcgttgc cttgcgcgac ggcggcggct
     2641 tcgtagcttt cgtgttgcaa aaattcgggg gcgagtgcca tatattcggc aggattggca
     2701 acgtgcacca aagtcaggcg cgcgctgttg actcctgcaa gttcggcggc atgtttcagg
     2761 gcattgatgg acgtttcact gccgtcaacg gcaacgacca aatgtttgta catatcgtat
     2821 tctccttttg caccgcctcg cggtgccctc ttgtcggatg ggcgcaggga cagtttgcac
     2881 tgtttcatta tagacccgcc gtcgggcttt atacaacagc cgaacagccc gaccgctttc
     2941 cagtataata tgccgcttcc gtgcagtcag gcattttttg ccggctttcg ttcacttttt
     3001 gatttgacgc aatcttgcag gattcgacca tgtccgacaa cgctttgacc tcttcgcgac
     3061 gcttcggcgg catcgccaga ctctacggag actctgcctt ggcgcacttt tcacaggcac
     3121 acgtctgcgt agtcggcgtg ggcggtgtcg gctcgtgggc ggtcgaggct ttggcgcgga
     3181 cgggcatcgg acgtttgact ttgattgatt tggacaacgt tgccgaatcc aatgtcaacc
     3241 gccagctgca cgccctaact ggcgacttcg gcaaagcaaa agttaccgcc ttgcgcgaac
     3301 gcattacaca aatcaatccg caatgcgaag tgtttgaaat tgaagatttc gttaccgaag
     3361 acaatttgcc ggaatacttc ggaaaaggtt ttgatttcgt catcgacgcg atcgaccaag
     3421 tgcgcgtcaa agcggcaatg gcgacttatt ttgtggaacg caaacaaccg tttgtcctca
     3481 gcggcggcgc gggcggacaa aaaaatccgg cgttaatcca aaccgccgat ttgagccgcg
     3541 taacccacga cccgctgctt gccaacctgc gctacacctt gcggaaacgc tacggcttta
     3601 gccgcgatac gaaagccaaa atgcgcgtgc cgtgcgtgtt ctcaaccgaa aacatcacgc
     3661 cgccgcaatc gggcgtggcg tgttctgccg atgccgcgcc gcagggcttg tcgtgcgccg
     3721 gctatggcgc aagtatgctc gttaccgctt cgttcggtct atattgcgcg caggcggcgg
     3781 tggaacacat cgcgggcaaa aaataagcaa tgccgtctga aacaggattc agacggcatt
     3841 tgaacaaact atggttatga tttaagacaa caaaggatac ggataaaaaa taacataaaa
     3901 tatatgattc ctaataatat accaagtatc ggagagctat ttaatggaat tcgttaataa
     3961 tttagttatt ttttcatttt tattactaat gcttattccg atattttttg tagtatatgg
     4021 tatataccat aagatacgtt atcgcaaaat atatatccta agaataagtt ttacattatt
     4081 agtggtaata ctttgcagta tgtattacat atattgccgt tatcttgacc aacaaaaagt
     4141 agcttattat tgcatagatg aacaatgtat ttctattgtt catctataca aagattatgg
     4201 tataaactct cccacatatg cgagaattta cgcaggaaaa atattgttta gatttcaagt
     4261 aagagctaaa aattacgctg aattacttat ggaagatgat atatcaatta gtaaaaaaat
     4321 tttggggaat aaatttatca tttatgggtc gctacctgta atatacggta atgtagataa
     4381 tattgaagta aaagaagcta ctggttatat agatagagcc agtactgatt atattgtctc
     4441 aagaaactta aaattcagac atttatatta attaagaggt tttagcaaga ccgtattcac
     4501 aacctgctcc ttttcaaaac atttgcattt aaaagccgtt ataatgccgt ctgaacatct
     4561 gcccgaccac attatgcgtg aatgccggca gattgttttc ttttgtaaac ttatattaaa
     4621 atccacttac cgattcacgc catgccgccc atccctgccc catccgcacc atccgagcac
     4681 actgtcgcat gggtattcgg ccaacccgtt accgatttgc cccaggattt gtttattccg
     4741 cccgatgcat tgaaagtcgt attgggcagt tttcaaggcc ctttggatct actgctgtat
     4801 ctgatccgca agcagaacat cgatgttctc gatattccga tggtgaagat taccgagcag
     4861 tatctgcact acatcgccca aatagaaacc tatcagtttg atttggcggc ggaatatctt
     4921 ttgatggcag caatgctgat tgaaatcaaa tcgcgcctgc tgctgccgcg taccgaagcc
     4981 gtcgaagacg aagaagccga cccgcgtgcc gagttggtgc gccgcctgtt ggcttatgaa
     5041 cagatgaagc tggcggcaca agggttggat gcgcttcctc gtgcgggccg ggatttcgca
     5101 tgggcgtacc tacctctgga aattgccgtc gaagccaagc tgcccgaagt ctatattacc
     5161 gacttgacgc aagcgtggct gggtattttg tctcgggcaa aacatacgcg cagccacgaa
     5221 gttatcaaag aaaccatctc cgtgcgcgcg caaatgacgg caatcctgcg ccgtttgaac
     5281 ggacacggga tatgcaggtt tcacgacctg ttcaatcccg aacagggcgc ggcttacgtg
     5341 gtcgtcaact tcatctcact gttggagctt gccaaagaag gattggtcag aatcgtgcag
     5401 gaagtcggtt tcggagaaat ccgaatcagc ctcaatcatg agggggcgca ttcagacggc
     5461 atttccggca cacggggcgg gcgcgatgtg ttctaatacg ccccaagccg ccaccaaaaa
     5521 tcgggagaca cgccatatga ccggcatcat acattcgctg cttgacaccg acctctacaa
     5581 attcactatg ctgcaagtgg ttctgcacca gtttccgcag acgcacagcc tttacgaatt
     5641 ccgctgccgc aacgcctcga ccgtctatcc gcttgccgac atcaaggaag acttggaagc
     5701 cgaactcgac gcgctctgcc ggctgcgctt cacccacgac gaactcggct atctgcgctc
     5761 cctgcgtttc atcaaaagcg actttgtcga ttatctcgaa ctcttccagc tccaacgccg
     5821 ctttgtcgaa atcggcacag acgataaaga ccgtctgaac atccgtatcg aaggtccgat
     5881 gatacaggcg atgttttttg aaatcttcat cctcgccatt gtcaacgaac tttacttccg
     5941 ccggctggaa acccctgccg ttatcgaaga aggtgaacgc cggcttcaag ccaaagccgc
     6001 gcgcctcaaa gaaatcgccg ccgcacaaaa ccccgacgat ccgcccttcc tgatttccga
     6061 cttcggcacg cgccgccgct acaagctcgc gtggcaggaa cacgtcatcc gcaccctgct
     6121 cgaagccgcc ccaagcatcg tgcgcggcac cagcaatgtc tttctcgcca aaaaactcgg
     6181 catcaccccc atcggcacca tggcgcacga attcctccaa gccttccagg ccctcgacgt
     6241 acgcctgcgg aatttccaaa aggccgcgct cgaaagctgg gtgcacgaat accggggcga
     6301 tttgggcgtt gccctgaccg acgtggtcgg tatggatgcc ttcctgcgcg atttcgacct
     6361 ctatttcgcc aaacttttcg acgggctgcg ccacgacagc ggcgaccctt acgtttgggg
     6421 cgacaaagcc tacgcccact atcaaaagct caaaatcgac agccgcacca aaatgctgac
     6481 cttctccgac gggctggaca tcgaacgctc ttgggcatta caccaatatt tcaaagaccg
     6541 cttcaaaacc ggcttcggca tcggcaccaa cctcaccaac gatatggggc atacgccttt
     6601 gaatatcgtg ttgaaactgg tcgaatgcaa cgggcagtcc gtcgccaagc tgtccgactc
     6661 tccgggcaaa accatgacca acaacagcac cttcctcgcc tacctgcgcc aagtgttcga
     6721 cgtacccgaa cccgaaacgc cgtaaaccgg cagaaaaagc gcacaattcc tgtttctgcc
     6781 gcataaaatc ttttaaaata ccgcctgatt tgaatttaac cgaaagaccg aacttcatga
     6841 acctacatca aaccgtcgaa cgcgaagccg ccgccgcctt tgccgccgca ggcatcgccg
     6901 acagtcccgt tgttttgcag ccgaccaaaa atgccgaaca cggcgatttc caaatcaacg
     6961 gcgtgatggg tgcggcgaaa aaagccaaac aaaatccgcg cgaattggcg caaaaagtgg
     7021 ctgaagcatt ggcggacaat gccgtgattg aaagcgcgga agtagccggc ccgggcttta
     7081 tcaacctgcg tctgcgccct gatttcctcg cacaaaacat tcagacagcc ttgaacgaca
     7141 cgcgtttcgg tgtggcaaaa accgacaaac cgcaaactgt cgtcatcgac tattcctcgc
     7201 ccaatctggc caaagaaatg cacgtcggcc atctgcgttc cagcatcatc ggcgacagca
     7261 tttcgcgcgt attggaattt atgggcaaca ccgtcatccg ccaaaaccac gtcggcgact
     7321 ggggtacgca gttcggcatg ttggtcgctt atttggtcga gcagcaaaaa gacaatgccg
     7381 cgttcgagct ggcggatttg gagcagtttt accgcgccgc caaagtgcgc tttgacgaag
     7441 cccctgcctt tgccgacacc gcgcgcgaat acgttgtgaa gctgcaaggc ggcgatgaaa
     7501 ccgttttggc attgtggaaa cagtttgtcg atatttcgct ctcgcacgcc caagccgttt
     7561 acgacacgct gggcttgaag ctgcgccccg aagacgtggc gggcgaatcg aaatacaacg
     7621 acgatttgca gcccgtagtc gatgatttgg ttcaaaaagg tctggcagtc gaagacgacg
     7681 gcgcaaaagt cgtgttcttg gacgagttta aaaacaaaga aggcgaaccc gccgcattta
     7741 tcgtgcaaaa acaaggcggc ggcttccttt atgcttccac cgatttggcg tgtctgcgct
     7801 accgtgtcgg cacgcttcat gccgaccgcc tgctgtacgt cgtcgaccac cgccaagccc
     7861 tgcactttga gcaactcttt accacttcac gcaaagccgg ctatctgccg gaaaacgtcg
     7921 gcgcggcatt tgtcggcttc ggcacgatga tgggcaaaga cggcaaaccg ttcaaaacac
     7981 gcagcggcga caccgtgaaa ctggtcgatc tgctgaccga agccgtcgaa cgcgccaccg
     8041 ctttggtgaa agaaaaaaat cccgaattgg gtgcagacga agcggcaaaa ataggcaaaa
     8101 ccgtcggcat cggcgcggtc aaatacgccg acttgagcaa aaaccgcacc agcgattatg
     8161 tgttcgactg ggacgccatg ctctcgtttg aaggcaacac cgccccctat ctgcaatacg
     8221 cctacacccg cgtgcaaagc gtgttccgca aagcaggcga atgggacgcg gacgcgccaa
     8281 ccgttttgac cgaacctttg gaaaaacaac tggccgccga gcttttgaaa tttgaaaacg
     8341 tgctgcaaag cgtggcggac acggcgtatc cgcactacct cgccgcctac ctctatcaaa
     8401 tcgctacctt gttcagccgc ttctacgaag cctgcccgat tttgaaagcc gaaggcgcaa
     8461 gccgcaacag ccgcctgcaa ctggcgaagc tcaccggcga cacgctgaaa caaggcttgg
     8521 atttgctggg catcgatgtg ttggacgtaa tgtaaaaccg caccgcccga ttgcggacaa
     8581 cagccccgca atcaaccggc ggaccatcct tatccgaatc tgaaaaaagc ggcgcgatac
     8641 accgtatccg ccgcctccca aaatgcgaaa cagacaaacg ccaagcaagc aagcaagcaa
     8701 gcaagcaagc aagcaagcaa gcaagcaaaa aattataacc cccttcctgc cgacgcacgc
     8761 actttccgcg cggcgcgttc cccttttccc gctcctcaaa cccgcctttt cttcaggcag
     8821 ggtttcagcc cgcctccttt ccctgttttc cttccctcaa cacgcgtgcg cgccccctgc
     8881 cgcaccgtgc cgcactttcg cgcccggacg gcatcggtct gtcatccggt tctctgtttt
     8941 aaatacccct gtttcagaaa gaaattgcag atgtttcaac acacaggacg acacataaag
     9001 caccgcccta tgtgttgccc tgatttggaa ggggttgc
//
LOCUS       DAWEYF010000079         8981 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.079, whole genome shotgun sequence.
ACCESSION   DAWEYF010000079 DAWEYF010000000
VERSION     DAWEYF010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8981
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.079"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(100..297)
                     /locus_tag="WGN93_001282"
     CDS             complement(100..297)
                     /locus_tag="WGN93_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227186.1"
                     /translation="MTAMPSEPPFRRHFTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWSITFLNHPF"
     gene            complement(294..1349)
                     /locus_tag="WGN93_001283"
     CDS             complement(294..1349)
                     /locus_tag="WGN93_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0227187.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDSFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            complement(1455..1937)
                     /locus_tag="WGN93_001284"
     CDS             complement(1455..1937)
                     /locus_tag="WGN93_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ0227188.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            complement(1984..3120)
                     /locus_tag="WGN93_001285"
     CDS             complement(1984..3120)
                     /locus_tag="WGN93_001285"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ0227189.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADCHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKSWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHRGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGKPDWFPLQS
                     RPDARLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            complement(3117..3662)
                     /locus_tag="WGN93_001286"
     CDS             complement(3117..3662)
                     /locus_tag="WGN93_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ0227190.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKNREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTHQTGIRANT
                     QTDFSKFKGCLKDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            complement(3659..5134)
                     /locus_tag="WGN93_001287"
     CDS             complement(3659..5134)
                     /locus_tag="WGN93_001287"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ0227191.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTSDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSNPESEWQETQNKARAVIHAAQMVQEGLDK"
     gene            complement(5193..5354)
                     /locus_tag="WGN93_001288"
     CDS             complement(5193..5354)
                     /locus_tag="WGN93_001288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227192.1"
                     /translation="MPSEALPAGKRARSLKPPPAKCPLRVPDGHLKTRRAASRTLQTA
                     SRSDCHQFR"
     gene            complement(5344..7254)
                     /locus_tag="WGN93_001289"
     CDS             complement(5344..7254)
                     /locus_tag="WGN93_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ0227193.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVVLAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSL
                     VFEGNGRLKEYIGGYQDYIDAKSREAKIQTASAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALETEQAEINAQLSDPEIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            complement(7273..7917)
                     /locus_tag="WGN93_001290"
     CDS             complement(7273..7917)
                     /locus_tag="WGN93_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ0227194.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(8081..8899)
                     /gene="opc"
                     /locus_tag="WGN93_001291"
                     /gene_synonym="opcA"
     CDS             complement(8081..8899)
                     /gene="opc"
                     /locus_tag="WGN93_001291"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ0227195.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTKSGDVSLTIPKTSIREYGLRVGIKF"
BASE COUNT         1921 a         1974 c         2573 g         2513 t
ORIGIN      
        1 cgctgtactg gtttttgtta atccactata aatgttccga tacgaactgc aaaatattgg
       61 ttttgtttct gacaggcaaa agcactgttt atttggctgt caaaagggat ggttaaggaa
      121 agttatgctc cagataagga tggttgcgcc gacggcttca gacggcattt tggcggcggt
      181 gttgggtttt gtatccggtt tgccgttgtg tcttgtgatg atgattttgg gcgcggtttt
      241 tctgttttga tgtgtgaaat gccgtctgaa aggcggttca gacggcatag cggtcatttt
      301 tgtgcggtca ggcggtcgaa tatgccgccg tcggcgaagt aggttttcat gatgttgtcc
      361 catccgccga atttttcttc gggagagaat gagtctaagt ctgggaagtc ggctttgtgt
      421 cttgccaata cttcggggtt gcgggggcgc aggtagagtg aggcggcgag ttcttgcgcc
      481 ggttcgctcc aaaggtattc gagataggcg cgggcggttt tttgcgtgcc ttttttcgcg
      541 acgacgctgt tgacgacggc gacggggctt tcggcggaaa tggtgtagct cggatagacg
      601 atttcaaact gtccttgggt cagttttttg ctgacgtagt tggcttcgtt ttcaaaagtg
      661 atgagtacgt cgccgatgtt gcgttgtgtg aaggtggtgg tggcggcgcg tccgccgttt
      721 tcaaaaacgg gggtgttttt gaggatggat gcgacgagtt tttgggcttc ctgttcgttg
      781 ccgttggtgg ttttcagacc gtaaccgtat gcgccgagga aggcgtagcg tccgttgccc
      841 gaggttttgg gattggcgat gacgatgtta acgccgtctt tggcaaggtc gttccaatcg
      901 cggatctgtt tggggttgtt ttttcggaca aggaaaacca tagtgctggt gtagggcgcg
      961 gcgtggtcgg ggagggcttg ttgccagcct ttttctacca gtcctttttt ttcgagcagg
     1021 tcgatgtcgg aggattggtt catggttacg acatcggctt gaaggccgtt ggctacggat
     1081 aatgcctgtt tgctggagcc gccgtgggac tgttggatgc tgacggatgt gccggggtgt
     1141 tcggattggt atgttttgat aaataagggg ttgtattctt tgtaaaaatc ccgtgccaca
     1201 tcgtatgagg cgttgagcag ggtaatgttt tttccgtcgg attcggtatt ggccggggca
     1261 ttttgtccgg acggatgatt tgaatcggct gcggggctgc aggcggtgag cagggctgcg
     1321 gtatagagtg ccggtgcgta ggttttcata tgcttgtcct gtcggttggt agatggggca
     1381 actttatacg gctgtctgcg cttgtggaaa taatgtttga tttgaagatt atcagttttg
     1441 gttataagga cggatcagag gtgtttccgc atcagttcgc atttgatttt gatgctgggg
     1501 tcaagctgca atactgccga accgagcgat tcgtagcggt tgagaaggta aaacgggacg
     1561 gagttgagcg atgcgtagag tttcagaaag ctcaaaccgg atttgtgggc gatggtttcc
     1621 gcctgatgaa gtagggcagt gcccagtccg aggttgtgga acagggggtg gacgtaaagc
     1681 gcatcgagtt gtgcttcttg gcagtcgatt tggaaaaatc cctgtatgtt gcctttgtat
     1741 tcggcaaccc aaagtgcttt gtcgggatcg gaaatggtcg gcaggtagct ttctgtgttt
     1801 agcaagcctt cccatacttt tagggcgtgt tcgttgtagc tgaggatgca ggtgtattgg
     1861 acggagtgca ggtggacttt gaagatgtct ttgcagtctt gcacggtggc ggggcgtaac
     1921 agtgtcagca ggttcatggc agtatgtcgg cggcttcaga cggcatctgt gccgttggtc
     1981 ggattatagg gactgatgca gtttttttgc ttcttgaaat gcggtgtccg aatcggtggt
     2041 taaaacggta aagtgtccca ttttccgccc tttgtgcgcg gtttttttgc cgtaaaggtg
     2101 caggcgcgcg tccggccggc tttgcagggg aaaccaatcc ggtttgccgc cgtcttcctg
     2161 ccaaacgtcg cccaaaatat tcgccataca gcaagaactc agcaatttgg tgtcagcagg
     2221 tggcaggttg cacatcaggc ggacctgttg ctggaattgg tctgccgcgc aggcatcgat
     2281 ggtatggtgg ccggagttgt gcggacgcgg cgcgatttcg ttgacgacca attcatgcgt
     2341 gtcgccgaca acaaacattt ctaccgccaa tacgccgacg tagttcaatt catcggccaa
     2401 acgctgcgcc atttgtcgcg cctgttgctg aatgtcggca ctcagtcggg ctgggacgat
     2461 ggagtaggcg aggataccgt tttcgtgaat gttttcggca ggatcgaaag tttgcacgtt
     2521 gtcattgttc agacggcata cgataacgga aatttcgccg cgcaagtcca ccattttttc
     2581 caaaacgcaa tccacgccgc ggtgttcggc aaacgcggct ttgagttcat ccaccgtttt
     2641 gacgcggatt tggcctttgc cgtcatagcc caatgtagcg gttttcagga tgccgggcag
     2701 aaattgtatg ctttcttcag tgatgtcttc ggctttgcaa attgcttgat acggcgcggt
     2761 ttgcaggcct gctttgcgta tccatgactt ttcctgaatg cggttttgcg cgatggcaac
     2821 gcagtcgccg ctgggggaaa cattggtgtg tttggcgaga aaacgcatcg catcggcatt
     2881 gacgttttca aattcagtgg tcaccgccgc gcattttgcc aattcgtcca aagcagcttg
     2941 gtcgttaaac ggcgcgcata aatgacagtc ggcaaattct gctgccggcg cgtctggatc
     3001 ggggtcgaga acggtgactt tgtagcccat ggttttggcg gcaacggtaa acattctgcc
     3061 taattgtccg ccgccaagaa tgccgagcat ggcgggcgga gaaagagata tgtttttcat
     3121 gctgactctt caaattgtac aagttgatag ctataactaa ttcttgacgg atgtcttgta
     3181 tcgctggaat taccagtttc agaaatacag aatacttttt ccataaattt ttctgctttt
     3241 agaaattcca gtattctgtt tttttcatcc ttataagcac cgcggtctgt accccatgca
     3301 agaataatca tatcggcatc tttcaaacat cctttaaatt tggaaaaatc ggtttgggtg
     3361 tttgccctaa ttcctgtttg atgtgtagag taactggaaa aaatatttaa cattttgaag
     3421 ttggtaaaac cgtacatatc caagaaacgt gcaagttggg taagggtttt gtcgcttctt
     3481 tcatcatttg ctttacttgg attaattcct atagcgacag ctgagaaatt tttaggattt
     3541 tctgtgttgc cgctccatct aaccgttagg atttctcgat ttttttcatt atctgtatag
     3601 agaccgtctt tggtagtcgg tctgagtgtt tggcgaagct cataaagttt ttcataagtc
     3661 atttatccaa cccttcctgt accatttgcg cggcgtgtat gacggcacgg gctttgttct
     3721 gcgtttcctg ccattctgat tcaggattgg aatcggcaac cacgcccgcg ccgctttgga
     3781 cgtatagtgt gttgtttttt actacggcgg tgcggatggc gattgccaaa tccatgtcgt
     3841 tgttgaaacc ccatacgccg acggcaccgc cgtagatgcc gcgtttgctc ggttcgactt
     3901 cttcgatgat ttccatggcg cggactttgg gtgcgccgga gagtgtgccg gcagggaagg
     3961 tagcggcgag gatgtccatg ttggtcatgc cgtctttcag acggccttcg acgttggaaa
     4021 cgatgtgcat tacatgggag tatttttcaa tcaccatttt gtcggtaact ttgacttcgc
     4081 cggttttact gatgcggccg acgtcgttgc gtcctaagtc aatcaacatg acgtgttcgg
     4141 cgatttcttt ggcatcgctt aacaaatctt gttcgttggc aaggtcttcg gcgggggttt
     4201 tgccgcgcag gcgcgtgccg gcgatggggc ggacgataac gtcgttgcgt tcgcgtcgga
     4261 cgaggatttc gggcgaggag ccgacgatgt ggaaatcgcc gaaatcgtag taaaagagat
     4321 aaggcgaagg gttgagcgta cgcagggcgc ggtagagggc gagcgggctg tcggtgaatt
     4381 ccatgctcat gcgctggctg gggacaacct gcatgcagtc gcctgcaaag atgtagtctt
     4441 tgattttgtt aacgcaggct ttgaacggct cttcgccgaa ttcgctgacg gcttcggtgt
     4501 gtttgctgcc gagcgagagc gggatggcgc agctttggcg caactgggtg cggatgtctt
     4561 cgaggcgttc gcgggcgcgt tcgtagccgt cgggctgcga cggatcggcg taaacgacga
     4621 gatggatttt gccgctcaaa ttgtcgatca ccgccaattc ttgcgacagc atcagcaaga
     4681 tgtcggacgt gccgagcggg tcggctttgg tggtgttttt caggcggtgg gcgaagtgtt
     4741 cgaaattgta gatggtttcg taaccgaagt agccgaccag tccgccggta aagcgcggca
     4801 ggcttgggat ttcgggtgtt ttgaagcggt tgtggaaggc ttcgataaag ggcagggggt
     4861 tgccgtcgtg ttgctcgaca atttcgccgt tttgataaac atcgacgtgt ttgccgctgg
     4921 ctttgagata gtggctgcaa ggcaggccga taaaagaata gcggccgaaa cgttcgccac
     4981 cgacaacgga ttcgagcagg taggtatagg ggcggttggc gagtttgaga tagagggaaa
     5041 gcggcgtatc caagtcggca aggagttctt gcacgagcgg gatgcggttg tagccttggg
     5101 cggcttgggc ttggtattct tgtttgctga tcatttctgc tttcccaaaa ggcggtttcg
     5161 gacggcgcgg taatgggcgc gagtatagca ttttatcgga attggtgaca gtctgaccga
     5221 gaggccgtct gaagggtgcg gcttgcggcg cggcgtgttt ttaaatgccc gtcaggtacg
     5281 cggagcgggc attttgcagg cggcggcttc aggcttcggg cgcgttttcc cgccggcagg
     5341 gcttcagacg gcattgccgt tttgtttggt ttccagcagc tcccagcgtt ccagcttttc
     5401 caaaagcagc atttcgattt cttcggcgcg gttttgcaat gcgccggctt tttcgtaatc
     5461 tttgaaaatt tcaggatcgg aaagttgcgc gttgatttct gcctgttcgg tttccaaggc
     5521 ggcgatttca tcgggtaggg catcaagttc gcgctgctct ttgtaggaca gtttgaccgt
     5581 gcggttggct ttgggttttt ctttcaccgg ttcggcatcg gctgttttgg gtgcggatgc
     5641 cgtctgaatc ttcgcttcgc gtgattttgc gtcgatgtag tcctgatagc cgccgatata
     5701 ttcttttaac cttccatttc cttcaaaaac aaggctttgg gtaatcacgt tatcgaggaa
     5761 catacggtcg tgcgagacaa ggaataccgt gccttgataa tcgcgcaaca ggtcttcgag
     5821 cagctcttgg gtgtcgatgt ccaagtcatt ggtcggttcg tccaagacca aaatattggc
     5881 gggacgggta aagagttttg ccagcaaaag gcggttgcgt tcgccgccgg agagtgaaga
     5941 aacaggactt tgagcgcggg caggggggaa caggaaatct tccaaatagc tcatcacatg
     6001 ctttttctta ccgccgactt caacgtaatc attgccctgt ccgagcgtgt aaaacacggt
     6061 gtcgttttca ttcaacgcgc tgcggaactg gtcgaaatag gcgacttcct gcttgctgcc
     6121 gatacggatt ctgccgtagg tcggctgcaa ttcgcccaaa atcagtttta aaaatgtggt
     6181 tttgccgatg ccgtttggac cgattaagcc gattttgtcg ccgcgctgca agatggcgga
     6241 gaatttgtcc ataatgactt tgtcgccata agcaaacgag gcgtgttcca gctcggcgat
     6301 gattttgccg cttttctcgc cgctgtcgag cttgaaattg acctgccctt gtacgttgcg
     6361 gcgttcggca cgctggcggc gcagttcttc caaacggcgc acgcggcctt cgttgcgggt
     6421 acggcgcgct tcgatgcctt tgcgtatcca cgcttcttcc tgcgcgtgga atttgtcgaa
     6481 gaggcggttg tgttccgctt cgactgccaa ctcttgcgct tttttctcgc tatatttgga
     6541 gaacgagccg ggataggaac gcaaaatacc gcgatcgagt tcgacaatcc gcgtggcgat
     6601 attgtccaaa aaacggcggt cgtgggtaat cacaaccaag ctgccttcaa acgctttgag
     6661 cagattttcc agccaaataa tcgcgtcgat atccaaatgg ttggtcggct cgtccagcag
     6721 caatacgtcg ggcttttgca cccaagcctg cgccaaaacg acgcgctttt tctgaccgcc
     6781 ggagaggttg ccgatttttt cgttttccgg caaaccgagt tcccccaaag tttgcttgac
     6841 tgccgcatcc agtttccagc cgtccttcgc ttcgatttca agttgcaatt cgttgagctc
     6901 tttcaacaaa gcctcactcg aaccattttc caactcatgg ctaacatgat gataacggcg
     6961 caataaatcg cgaatttcgc ctaaaccttc ggcaacggta tcaaatacgg ttgcgtcctt
     7021 atcaaaaaag gattcctgcg gtacataaac gattttgagg ttgttttgaa caataatctg
     7081 cccgtcgtcg agcttttgca caccggcgag gatttttaaa aacgaagact tgcctgcgcc
     7141 gttgcgtccg atcaagccga ctttttcgcc gctgtcgagt tgaaaagaag ttttgtcgag
     7201 caaggcaacg tggccgatgg caaaagaagc gttttctaca gataatatat tcatgataca
     7261 aattctcaac agttaccgtt tggattttac cgcaagtttg gcgcgggcaa tttcaaccgc
     7321 acccggcagg acggaaacaa taatgatgcc gcccatcacc aagcccagat tgttttttac
     7381 gacggggaag ttggcaaaga aatagcccgc gtaagaaaac aggataaccc acaacaagcc
     7441 accgatgatg ttgtagcgga taaatttggc atagtgcatt ttccccatac cggcgacaaa
     7501 gggggcgaag gtgcggacga tgggtacaaa acgggcaatg atgatggttt tcccgccgtg
     7561 tttttcgtaa aaacggtggg ttttatcgag atattcgcgt cggaagattt tagaatcggg
     7621 attggcgaac agcctgccgc cgaaatattt gccgacggta aaattgagcg cgtcgccgag
     7681 tatggcggca aggcttaata atgcaaccat caaatgaata tccataccgc ccagcgcggc
     7741 aatcccgccg gcggcaaaca gcagcgaatc gccgggcagt aagggcgtaa caatcaggcc
     7801 ggtttcgcaa aaaacaatca aaaacagaat cgcataaatc cacacaccgt attgcgccga
     7861 cagcgcaagc aggtgttggt cgatatggag gatgaagtcg atggcggagg caagcacggc
     7921 gcgttcctaa aaaaaacaaa ccgcgtattt taaccgattg gaaaaatgcc gtctgaaatt
     7981 ttcagacggc atcggctatt caaattcatt tcacgtaaaa accgcaaacc aaaatagttt
     8041 gcggtttggc atttaaagtg acaatgatga tttcaaatca tcagaatttt atgccgacgc
     8101 gcaagccgta ttcacgaata ctggttttcg ggatggtgag cgatacgtcg ccactcttgg
     8161 ttgttacact aaactcgccg gattctttgt aagtgcgttg tttgtagaac ggccccgcct
     8221 cgatgctggc ggattcgccc agttttttac caatatttgc acccaatcca aagccccagc
     8281 cgttggtttt ttgattgatg tcttttttga gattggtaac gccggtgttt aatttatagc
     8341 gggaattgag gtcaaatttc acttcagacc aagggttgat ataccagccg ttacccagtt
     8401 gggaaagcaa atccgcgtga actttggcta accacgactg acggctgctg tgaagcgtat
     8461 gcttggtggt tttaatgctg tcttttgaag attcaaaacc caagccggca cccacacgga
     8521 aatttaaaga atcacttaac gtttgggtgt aggtgtagcc tgtgtaaaga tcgatacggt
     8581 tttcaggaac gccggtgggc agttttacat ttttagtctt acccagcttg ttctcatctg
     8641 tttccaaatt aataatattt tttttgctgc gcccgaaacc ggcttccaag cggatgcctt
     8701 ggttggcatc aaaaggaata tcagcacgta cgccgatgtg tttggcagct ttgtgttttt
     8761 ctttcaggaa agcacgagtt gaagaaatgg aagagaggtc ggtgtggacg gtaaactcat
     8821 tagcggtttg aagctcttgt gcagcggcgg cagtaccggt cagggcaatc atggcacatg
     8881 taaaaactgt ttttttcata gttaaaatct ccaaaatttg gattgtagtc ggatatggta
     8941 acataacgta aataatcgtt acgcttacaa ttatattctt a
//
LOCUS       DAWEYF010000080         8701 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.080, whole genome shotgun sequence.
ACCESSION   DAWEYF010000080 DAWEYF010000000
VERSION     DAWEYF010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8701
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.080"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            191..1726
                     /locus_tag="WGN93_001292"
     CDS             191..1726
                     /locus_tag="WGN93_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ0227196.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRRHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1723..1815
                     /locus_tag="WGN93_001293"
     CDS             1723..1815
                     /locus_tag="WGN93_001293"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ0227197.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(1875..3095)
                     /gene="lysA"
                     /locus_tag="WGN93_001294"
     CDS             complement(1875..3095)
                     /gene="lysA"
                     /locus_tag="WGN93_001294"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ0227198.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVDGNEYRLIRRR
                     ETLEQQMANELACL"
     gene            complement(3106..3276)
                     /locus_tag="WGN93_001295"
     CDS             complement(3106..3276)
                     /locus_tag="WGN93_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ0227199.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3348..3671
                     /gene="cyaY"
                     /locus_tag="WGN93_001296"
     CDS             3348..3671
                     /gene="cyaY"
                     /locus_tag="WGN93_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ0227200.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAEN
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3698..4714
                     /locus_tag="WGN93_001297"
     CDS             3698..4714
                     /locus_tag="WGN93_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEZ0227201.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGALLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTALLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAESVTKAESHKVSVAIAIV
                     VIFGTLAIFTYPLFYTWSQDLINAHQFGIYVGSSVHEVAQVYAIGENINPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSDGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTQASAIKKAGLKPFVLGILTYLWLVVGGFLVNYGI
                     SKLI"
     gene            4740..5159
                     /locus_tag="WGN93_001298"
     CDS             4740..5159
                     /locus_tag="WGN93_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ0227202.1"
                     /translation="MAQLPLYRTAEIENFTVGTPEVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAQGEWPKVTDRVLDDELQDKILSRKPT"
     gene            5181..5687
                     /gene="luxS"
                     /locus_tag="WGN93_001299"
     CDS             5181..5687
                     /gene="luxS"
                     /locus_tag="WGN93_001299"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ0227203.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVANVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            5833..8628
                     /gene="polA"
                     /locus_tag="WGN93_001300"
     CDS             5833..8628
                     /gene="polA"
                     /locus_tag="WGN93_001300"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ0227204.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLRAALPRLPLSYDLVTIKTDVDLHAELSDGLESLRRTAPKWAQLVVDFK
                     RWGFRTWLKEAESRMHEAADGDLFGSDTIGEQAALDMETSSERLPEKAVAPEKLDYQA
                     VTTEAQFATLLDKLSQAEKIGIDTETTSLDAMNAALVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGHLKPYLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPDMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLVSDDLKSKLIMQVHDELVLEVVETELDFVKEKLPQIMAKVGGGLLD
                     VPLVAEVGVGENWEEAH"
BASE COUNT         2039 a         2252 c         2295 g         2115 t
ORIGIN      
        1 aaatttttcg ttttcaagcc ttcaccgctt gccatcagcg ttaaattttt ttacgataag
       61 cacatagatt gtaaacaatc ggccacaagc cggtttgttt tttcagaaga cattatccct
      121 gtcagacgct atttctatat atttcgccta taatggcttg tttttaataa ataattcaag
      181 aggtatcaac gtgtctgatt ccaagacgaa agaacgcgcc acattcggca cgcgccgcgc
      241 gtttatgatt gccgccatcg ggtccgccgt cggcttgggc aatatttggc gtttccccta
      301 tattgctttt gaaaacggcg gcggcgcgtt catcctgccc tatctggtcg cgcttctgac
      361 ggcgggcatc ccgctgctgc tgctcgatta tgccatcggc caccgttacc gtggttctgc
      421 gcccttggct ttccgccgcc tcggacgatg gtttgagccg gtcggctggt ggaacgtgat
      481 gaccaatatc gtcatctgca tctattacgc ggtaattatc ggttgggcgg caagctatac
      541 ctattattcg gtcaacgccg cctggggtgc ggatccgcag ggttttttct ttaaggactt
      601 cctgcaaatg gcgggcccgg aagccttggg tttggatttt gtcggcaaag tcgccggtcc
      661 tttggcgggc gtgtgggttt ttaccgccgc cattatggcg ttgggcgtgc aaaagggcgt
      721 ggcgcgcgcc tcgtcgttct ttatgccgct gcttttggtg atgtttttga ttatggtcgg
      781 catttcacta accctgccgg gtgcggcaaa gggcttggac gcattgttta cgcccgactg
      841 gtcgaaactc gccgattcca aggtctgggt ggcggcatac gggcagattt tcttttcgct
      901 ttccatctgc ttcggcatta tggttaccta ttcttcttat ttgaagaaaa aaaccgactt
      961 gggcggaacg gggctggtgg tcggttttgc caacagcagc tttgaactgc tcgcgggcat
     1021 cggcgtgttt gccgcattgg gctttatggc gcaggcgggc ggtaaggcgg tcaacgaggt
     1081 tgcctcaggc ggcatcggtt tggcgtttat cgcctttccg accattatca accaggcacc
     1141 gatgggctgg ctgatcggca tattgttttt cggttcgctg gtgttcgccg gcgttacgtc
     1201 gatgatttcc atccttgaag tgattgtggc ggcgattcag gacaagctga acatcgggcg
     1261 cgtcaacgcc acgctgctgg tctgcattcc gatgggcatt gtttccacgc tgctgttcgg
     1321 tacggcgacg gggctgccgg ttttggacgt gatggacaaa ttcgtcaaca cctacggcat
     1381 tgttgccgcc ggctttgttt atgttgccgc catcatcatc agcggcaggc tgccggaatt
     1441 acgcaggcac ctgaacgctt tgtcctccat ccgcatcggc ggcttgtgga cggtctgcgt
     1501 cgtggttacc gtcgtgatgc tcggctatat gctgtttaaa gataccagcg gcctgatgga
     1561 gaaaaattac gaaggttatc cggatggttt cctcagtatt ttcggctggg ggatgtcggc
     1621 ggcgttggtc gtgttcgggc tgctgctgtc gttgctgcct tggaaacacg gtcaggattt
     1681 caacgtcaaa gacgaacacg aacatgaaca aggagaagaa aaatgagtac ttccgccatt
     1741 gtgatgatga ttgtctcaat cgtgataatc tggggagggc tgctgctttc cctgttaagg
     1801 ctgccgaacg agtaagcctt tagagcgtta aaaatgccgt ctgaaccgct tcagacggca
     1861 ttttgatgtt cggcttacag gcaggcgagt tcgtttgcca tttgctgttc caaggtttcg
     1921 cgccggcgga tgagtcggta ttcgttgccg tccaccaaca cctctgccgc acggttgcgc
     1981 gcgttgtaat tgctcgccat actggccccg tatgcgcccg cgctgcggat aagcagcaaa
     2041 tccccttctt cgcaggcgat ggtgcggtct ttgccgagga agtcgccggt ttcgcaaatc
     2101 ggaccgacga tgttggcggt cagaggctca atgtctttgg tttcgaccgc ctcgatgtga
     2161 tgataggcat cataaagcgc cgggcgcatc aaatcgttca tcgccgcatc gaccatcaca
     2221 aagtttttct cttcgccgta tttgacgaat tcgacgcgtg tcagcagcga acctgcgttg
     2281 ccgaccaagc tgcggccggg ctcaagaatg agtttcagac ggcgtgtgcc gatcagtttt
     2341 tgaacggctt gggcatacgc gcccaaatca ggcacttttt cgttttggta aacaatgccg
     2401 acgccgccgc ctaagtccaa atgttccaaa acaatgcctt cggcggcaag cgcgtcaacc
     2461 aaaatcaaaa tgcgttcgca ggcttcgacc agcgggctta agtcggttag ttgggagccg
     2521 atgtggcagt cgatgccgat gattttcaaa ttgggctgtt gtgcggcatg gcggtaggct
     2581 tcgagcgcgt cggcgtaggc gataccgaat ttgttggctt tcaaacctgt ggagatgtaa
     2641 ggatgggttt tcgcatcgac atcgggattg acgcgcaggg agacgggcgc ggttttaccc
     2701 aaacgcgcgg caactttctg aatacggtcg atttcgggga tgctttccat attgaagcat
     2761 ttcacgcctg cattcagcgc gaactcgatt tccgcctcgc ttttgcctac gcctgaaaat
     2821 atggtttttg ccgcgtcgcc gcctgccgcc aaaacgcgtg ccaattcgcc gccggacaca
     2881 atgtcaaaac cgctccccaa agaagcaaag tgtttgatga tgctcaggtt gccattggct
     2941 ttaaccgcat agcagacgag cggggagagc tcggcaaagg cagtttggta gtgttcaaat
     3001 gcttcggtca gcgcggattg gctgtacaca taaagcggtg tgccgaatgc ttcggcaagg
     3061 cgggggtagg ggacttgttc gcaaaatagg gtcatatttt cgttttcatt tttgggttgg
     3121 aggggcggat tgcggtttgc cttgaagctg caaaccggtt tggattacgc cgaagcgcgc
     3181 cttgtcgcct tctttgggca ggtagaggtc gcctttgtag ccgcaggcag agagcagcag
     3241 agccgttgct gctgcaaaaa atacgccgta tttcatcagt aaaactttct tcatcattac
     3301 gaatgtggca agattcggta tcttaaacaa aaaccacaca aaaagccatg atgaccgaaa
     3361 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     3421 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccgaaaacg
     3481 gcacgcaaat catcgtcaac cgccacacgc ccaaccaaga attatggatt gccgccaaaa
     3541 gcggtggcta ccatttcgcc gaacaaaacg gcaaatggct ggcaacgcgc gacggacggg
     3601 atttttacga cgttttaaac gaagccctga gcgcggcttc gggcgaagcg gtagagattg
     3661 aggaattgtg atttgggtgt tatcacggaa agaaaaaatg aacacacgtc ccttttattt
     3721 cggacttata tttatcgcga ttattgctat acttgctaac tatttaggaa acactgattt
     3781 ttcccatcat tatcatatca gtgctttaat tattgctatc ttgctgggaa tggcaatcgg
     3841 caataccatt tatccgcaat tttcaacaca agtggaaaaa ggtgttttgt ttgccaaagg
     3901 cgcgcttctt cgcactggca ttgtgttgta tggttttcgc ctcacttttg gcgatattgc
     3961 cgatgtagga ttaaatgcgg ttgtcactga tgcaatcatg ctaatttcaa ccttcttttt
     4021 taccgcactt ttaggcattc gttatctaaa aatggataaa caattggttt atctcactgg
     4081 ggcaggttgc agcatttgcg gtgcggcagc ggttatggcg gcagagtctg ttaccaaagc
     4141 agaatcccat aaagtttcag tggcgattgc catagtggtc attttcggga cgcttgctat
     4201 ttttacttac cccttgttct acacgtggtc acaagattta attaacgccc atcaattcgg
     4261 tatttatgtt ggttctagtg tacacgaagt ggctcaagtg tatgcgattg gggaaaatat
     4321 taatcctatc gtggcgaata ctgccgtcat ttccaaaatg atccgagtga tgatgctcgc
     4381 ccccttttta ttaatgcttt cttggttatt aacacgtagt gatggggtat cagaaaatac
     4441 ctcacacaaa attacaattc cttggtttgc tgtacttttt attggtgttg ccatttttaa
     4501 ttcttttgat ttattaccaa aagaactcgt gaaattattc gttgaaatcg attctttctt
     4561 attaatttca tcaatggctg cgcttggctt aacgacgcaa gcaagcgcaa tcaaaaaggc
     4621 aggattaaaa ccgtttgttt taggaatact aacttattta tggctagtgg ttggtggatt
     4681 tttagtgaac tatggaatat caaaattaat ataaaattca ctaaagagag cgttacccaa
     4741 tggcacaatt acccctgtat cggactgccg aaatcgaaaa ttttactgtc ggcacgcccg
     4801 aagttttaga atcattttcc aaacatatcc cttatggtgt tgtctttgaa gacgacggcg
     4861 acacaggcta cttctatgcc gcttcgcaag acgggatttt agatgccttg cacatttaca
     4921 atgtcgaaga tgtatccgat aaacatatcc ccaatcatgt cttgatttta tgggatgatg
     4981 cctgcaccat agccgcattg tgtatcaacg actacattca tgccgtctat gattttgtcg
     5041 aacaggcagg atattgccgc aacggcttcc ctgaagcaca aggcgaatgg ccgaaagtca
     5101 cagaccgcgt attggacgat gaattgcagg acaaaatcct atcccgaaaa cctacataac
     5161 ctactcaaaa ggataaccca atgcccctac tagacagttt caaagtcgat cacacccgta
     5221 tgcacgcccc cgccgtacgc gtggcgaaaa ccatgaccac gcccaaaggc gacaccatta
     5281 ccgtgtttga cctgcgtttc tgcattccca acaaagaaat cctgcccgaa aaaggcatcc
     5341 acacgctgga gcatttgttc gccggtttta tgcgcgatca cttgaacggc aacggcgtgg
     5401 aaatcatcga catttccccg atgggctgcc gcacaggttt ctacatgagc ctcatcggta
     5461 cgccttccga acagcaggtc gccgatgcgt ggctggcttc gatgcaggat gtggccaatg
     5521 tcaaagacca aagcaaaatc cccgagttga acgaatacca atgcggcact taccaaatgc
     5581 actcgctcgc cgaagcgcaa caaatcgcgc aaaacgtgtt ggcgcgcaaa gtggcggtga
     5641 acaaaaatga agagctgacg ctggatgaag ggctgctgaa cgcctaatcc gccaaaaatg
     5701 ccgtctgaac aagggtttca gacggcattt gccttttccg ttataatctg gggttgtgcg
     5761 ggggcgggtt ttaagccggc atcgtccttc cctatttttt tctgtccctt atcggtttta
     5821 agcgggtttt ttatgtccaa cagacctaca ctcctcctcg ttgacggatc gtcctacctc
     5881 taccgtgcgt atcacgcgat ggggcaaaac ctgaccgcac ccgacggtgc accgacgggt
     5941 gcgctgtatg gcgtattgaa tatgttgcgc cgtttgcggt cggaatatcc gcacgattat
     6001 tgcgcggtgg tttttgatgc gaaaggcaaa aatttccgcc atcaaatgtt tgaagaatac
     6061 aaggcgacgc gcccgccgat gcccgacgat ttgcgtccgc aggcggaagc tttgccggat
     6121 ttggtgcgcc tgacgggctg gccggtattg gtgattgggc aggtggaagc ggacgatgtg
     6181 atcggcacgc tggcaaaaca gggggcggaa catggtttgc gagtcattgt ttcgaccggc
     6241 gataaggaca tggcgcagtt ggtggatgag cgcgttacgc tggtgaacac gatgagcgga
     6301 gaaacgctgg atattgaagg cgtgaaggca aaattcggcg tgcgccccga ccaaatccgc
     6361 gattatctcg cgctgatggg cgacaaggtg gacaacgtgc cgggcgtgga aaaatgtggc
     6421 ccgaaaacgg cagtgaagtg gctggaagcc tacggctcgt tgcaaggcgt gatagaacac
     6481 gcttcggaaa tcaagggcaa agtgggcgag aatctgcgtg ccgccctgcc gcgcctgccg
     6541 ctgtcgtatg atttggtaac gattaaaacc gatgtggact tgcacgccga gctttcagac
     6601 ggcctcgaaa gcctgcgccg taccgcgccg aaatgggcgc agctggttgt cgatttcaaa
     6661 cgctggggct tccgcacctg gctgaaggaa gcggaaagcc gtatgcacga agcggcggac
     6721 ggcgatttgt tcggcagcga tacgataggc gaacaggcgg cgttggatat ggaaacgtcg
     6781 tctgaaaggc tacctgaaaa agccgttgcc cccgaaaagc tggattatca ggccgttacc
     6841 accgaagcgc agtttgccac tttgttagac aaattgtcgc aggcggaaaa aatcggcatc
     6901 gacacggaaa ccacttccct agacgcgatg aacgccgcgc tggtcggcat cagcatcgcg
     6961 ttccaagcgg gcgaagcagt ttacatcccc gtaggacaca gcctgaccgc cgcgccagaa
     7021 cagcttgatt tgcaagacgt attaggccat ctgaaaccgt atttggaaaa tcctgccctg
     7081 aaaaaaatcg ggcaaaacct caaatacgac caacacgttt tcgccaatta cggcatcgcc
     7141 ctgaacggca tcgccggcga cgccatgctc gcttcctaca tcatcgagag ccatctcgga
     7201 cacggcttgg acgaattgtc cgaacgctgg ctcggcttgg aaaccattac ctacgaatcg
     7261 ctgtgcggca aaggcgcgaa gcaaatcggt tttgccgatg tcgccatcgg gcaggcgacc
     7321 gaatacgccg cccaagacgc cgatttcgcc ctgcgcctcg aagcgcacct gcgcgcgcaa
     7381 atggacgaaa aacagcttga aatgtatgaa aaaatggagc tgcccgtcgc gcaggtattg
     7441 tttgaaatgg aacgcaacgg tgtgcaaatc gaccgcgccg aactcgcccg ccaaagcgcg
     7501 gaactcggcg ccgagctgat gaagctcgaa caagaagcct acgccgccgc agggcagccg
     7561 ttcaacctca actcgcccaa acagctgcaa gaaatcctgt tcgacaaaat gggcatcccg
     7621 acaaaagggc tgaaaaaaac cgccaagggc ggcatttcca ccaacgaggc cgtgctcgaa
     7681 cagctcgcgc ccgactaccc cttgcccaaa atcatcctgc aaaaccgcag cctggcgaaa
     7741 ctcaaatcca cctacaccga caaactgccc gacatgattt ctccccggga taaccgcgtg
     7801 cataccacct acgcccaagc cgtcgccatt acaggacgct tggcaagcaa caaccccaac
     7861 ctgcaaaaca tccccatccg caccgccgaa ggccgccgcg tgcgccgcgc ctttaccgcg
     7921 ccaccgggca gcgtcatcgt ttccgccgac tattcccaaa tcgaactgcg catcatggcg
     7981 cacctctctg gagacaaaac cctcattgcc gcattccaaa acggcgaaga cgtacaccgc
     8041 cgcaccgccg ccgaagtgtt cggcactgcg cccgaaaacg tctcgcctga gcaacgccgc
     8101 tacgccaaaa ccatcaactt cggcttaatc tacggtatgg ggcaatacgg ccttgccaaa
     8161 tcattgggca tcgacaacct ttccgccaaa aactttatcg accgctactt cgcccgctac
     8221 cccggcgtcg ccgaatacat gcagcgcacc aaagaacaag ccgccgccca aggcttcgtc
     8281 gaaaccctgt ttggccgccg cctctacctg cccgacatcc gcaacaaaaa cgccaacgcc
     8341 cgcgccggag ccgaacgcgc cgccatcaac gcccccatgc aaggcaccgc ctccgacctt
     8401 atcaaacgcg ccatgataga cgtgtcccgc tggctggttt cagacgacct gaagagcaaa
     8461 ctgattatgc aggtgcatga cgaactggtg ctggaagtcg ttgaaaccga actggatttt
     8521 gtcaaagaaa aactgccgca gattatggcg aaagtgggcg gcggattatt ggatgtaccg
     8581 ctggtggctg aggttggcgt aggggagaat tgggaagagg cacattgatt gaaaggtgtt
     8641 attatgctat ctttatttaa ataaaattta atttttggta tattttttct aaatgttcct
     8701 a
//
LOCUS       DAWEYF010000081         8575 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.081, whole genome shotgun sequence.
ACCESSION   DAWEYF010000081 DAWEYF010000000
VERSION     DAWEYF010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8575
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.081"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(111..938)
                     /gene="fghA"
                     /locus_tag="WGN93_001301"
     CDS             complement(111..938)
                     /gene="fghA"
                     /locus_tag="WGN93_001301"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ0227205.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            complement(947..2056)
                     /locus_tag="WGN93_001302"
     CDS             complement(947..2056)
                     /locus_tag="WGN93_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ0227206.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLDCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFELMHEGKSIRAVIHY"
     gene            2204..2611
                     /locus_tag="WGN93_001303"
     CDS             2204..2611
                     /locus_tag="WGN93_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ0227207.1"
                     /translation="MAYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(2811..3125)
                     /locus_tag="WGN93_001304"
     CDS             complement(2811..3125)
                     /locus_tag="WGN93_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ0227208.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(3136..4821)
                     /gene="rpsA"
                     /locus_tag="WGN93_001305"
     CDS             complement(3136..4821)
                     /gene="rpsA"
                     /locus_tag="WGN93_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ0227209.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDESRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(4977..5633)
                     /locus_tag="WGN93_001306"
     CDS             complement(4977..5633)
                     /locus_tag="WGN93_001306"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ0227210.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYREV
                     "
     gene            complement(5877..6922)
                     /locus_tag="WGN93_001307"
                     /pseudo
     CDS             complement(5877..6922)
                     /locus_tag="WGN93_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            complement(7059..7307)
                     /locus_tag="WGN93_001308"
     CDS             complement(7059..7307)
                     /locus_tag="WGN93_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ0227211.1"
                     /translation="MKRHPTLQPLSRQHHLGLVIANKAKSVTDDDKLTQHQAFILTVA
                     GATVGFGATWRFPYLVGENGGARMCFYSVSRCWLSASR"
     gene            complement(7401..8564)
                     /locus_tag="WGN93_001309"
     CDS             complement(7401..8564)
                     /locus_tag="WGN93_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0227212.1"
                     /translation="MQRKFDLAQKPVLLSYGIDYEQEKNRQGATGYDLTTFMQSNGLA
                     FKDTGNRYTYGPDTTLKTYGIFANANVALTDDLKISAGVRHQIIDSKTDGFVPPSESL
                     LADLLNQNKVPYQAGTVNSGKVKHHKTLFNLGANYSLTPNHSIFANFGQGYSLPDLQR
                     VLRDVGTGFAVNSDNVEPISVNSYDAGWVGVFGGSRAKLTGFYNTSDKVTQFLKDYSV
                     VVADTDERIYGAEFELNHKINDNWAVGGSIAYTRGQYKDASGQYRELGAFRISPTKAT
                     AFAQYTTPSEHKLRLQLLAIDGTQRAYKDSLIAKTNQKVRKTPEARISGYVVADLLGE
                     IKLPKGQLNFGIYNLTNKKYKSVFSQAAKVTYGELSSLSAQGRSYGISYTLNY"
BASE COUNT         2152 a         2050 c         2030 g         2343 t
ORIGIN      
        1 ccgtagagtc ggctccttcc ggctcagacg gcatacgttt atgccggcac ttcttaccgc
       61 cctcgtgccg gctatcccaa aactgctttg aacactgaac gctctttggt ttacttcaaa
      121 aacgcggcgt gataagcaat atgctcgcca ataaaactgg cgatgaagta atagctgtga
      181 tcgtagcctt tatggaaacg cacatcgacc ggctggtttg ccgcacggca ggtttcgata
      241 aaatcttcgg tacgcaattg tgtcggcaaa aactcatctt ccaagccttg atcgatgcgc
      301 ataccttgca ctttatagcc ttgttgaatg agtgagttcg catcatattg ctgccatttt
      361 tcacggtctt tccctaaata agcagtaaag gctttttctc cccacggcac gaggcttggc
      421 gataaaatag gcgaaaaggc agaaacactt tgataacgtt cctgattccg cagcgccaat
      481 accaatgcgc cgtgtccgcc cattgaatgc cccataatgg aacgtttgcc gttggtagga
      541 aagtgtttct caatcagacg gggcagctcg ttcaaaatgt aatcatacat ttgataattc
      601 gccgcccaag gctgttcggt cgcattcaaa taaaagcctg caccctgtcc taaatcgtaa
      661 gcatcatcgt tcggcacttg ctctccgcga gggctggtat cggaggccac cacaattact
      721 tgatgttctg ccgcataacg ctgaaagcct gatttggtaa tgaaattttg ttccgtacac
      781 gtcaagccgg aaagccaata aatcacacca agcggtcgat tttctggatt atttggcaaa
      841 tagacggcaa atttcatttc gcattgcagc gtttgggcat gatgcgccca aacttgttgc
      901 gaaccgccaa aaatttgatg ttgttcaatc agtttcatcg cataccttag tagtgaataa
      961 cggcgcggat tgatttacct tcgtgcatta actcaaaggc ttcattgatt tgatcgagtg
     1021 tcattgtgtg ggttacaaac ggttctaact caatgtcgcc tttcattgaa tcttccacca
     1081 ttttcggcag ttcagagcga cctttcacac cgccaaatgc tgaacctttc caaacacgac
     1141 ctgttaccaa ctggaacgga cgcgttgaaa tttcttgtcc tgcacctgct acgccgatga
     1201 taatggattg tccccaacca cggtgcgcac tttctaatgc ctgacgcatt acgtttacgt
     1261 tgccgataca ttcaaaggtg tgatcaatgc cccatttatt gatgtctaac aacacatctt
     1321 taatcggttt atcgtaatcg ttcgggttca aacaatccgt tgcaccgaac tgttttgcca
     1381 actcaaattt tgatggattg gtatcaatgg cgataatgcg gccggctttg gcttgacgcg
     1441 caccttgcac caccgccaaa ccaatcgccc ccaaaccaaa cacggcaaca gagtcgcctt
     1501 cttgcacttt tgccgtatta tgtaccgcac caatacctgt ggtaacgccg cagtcgagca
     1561 aacatacttg ttcatggttg gcttcagggt tgattttcgc cagtgaaact tcggcaacaa
     1621 cggagtattc actgaaagtc gaacagccca tatagtgata aatcggctga ccttgataag
     1681 aaaaacgcgt cgtgccgtcc ggcattaagc ctttaccttg tgtatcacgc actgagacgc
     1741 acaagttggt tttacctgaa caacaaaact cacattcgcc acattcggcg gtgtaaagcg
     1801 gaatcacgtg atcacccggt tttacgcttg acacaccttc gcccacagca acgaccacac
     1861 ccgcaccttc gtgtccaagc accacaggga atacgccttc aggatcgctt cctgataacg
     1921 taaacgcatc agtatggcac acgccagtgt gggtattgcg gattaacacc tcgcctttac
     1981 gcggcatttc tacgtcgatt tccacaattt gtaagggttg gttaggggcg aatgccaccg
     2041 ccgcacgaga tttgatggtt gaatcggttt gtttcatttc cattgtcttt cctcttaatt
     2101 cattgacaaa gttgccttac ctgagcaaca tagcaacagt ttacacttta gagttaactc
     2161 taaagcaagt gttttttact gtttttgttt agaaggaggg aaaatggctt ataccactgc
     2221 caaagccgcc gaaaaaatag gcatctccgc ccacacccta cgtttttacg acaaagaagg
     2281 cttgttgcct aatatcggac gtgatgaata cggtaaccgc tgttttaccg ataacgattt
     2341 gcaatggttg ggcttattgc aatgcttgaa aaatacgggg atgagcttaa aagacatcaa
     2401 acgctttgcg gaatgtaccg tcattggcga cgataccatt gaagaacgcc tttccttgtt
     2461 tgaaaatcaa atagaaaatg tgaagtgtca aattgccgaa ttaaaacgct atttagattt
     2521 gcttgaatac aaattggcgt tttaccaaaa agcgaaagca ttaggctcgg taaaagctgt
     2581 aaatttgccg caaattcctg aaacggctta gttttagtgc aataagcagg atttttgtcc
     2641 tgttcgtaat agaaatcaaa aatttgttgt ttaaaaagcg gattgtaagc aatgataaaa
     2701 aaatccacgc tctaatccgt tgcttgcttg tcttaaggta ttgaagcagc ggatgaagtt
     2761 aaaccacaga aaaaaaacgc cgcttggaag cggcgttttg atgctaaggt ttaattggca
     2821 ttttctttta aagccaaatc gacccgctcg cgcaattctt taccgggctt gaagtggggt
     2881 acatgttttt caggtacttc cacacgctcg ccggttttgg gattgcgacc gatgcgggca
     2941 ggacgatggt tcaaatcgaa gctgccgaaa ccgcggattt cgatgcgttg acctcgggca
     3001 agcgatctag tcatggtgtc aaccaagact tttacgctgt actctacgtc ttttgccaga
     3061 agatgcgtgc cgtttttggc ggcaaacact tctgccaaac gaaccattaa ctcagacttt
     3121 gtcatgtctg caaccttatt cttgttcgcc ggagagtttg gctttcagca ggtcgcccaa
     3181 gctggtggtg ccggcattcg cattggcggc ggcattgacg gagttcagtg cttcgcggct
     3241 ttctttggca tctttggctt taacggaaag tttgatgctg cggtttttgc ggtcaacggt
     3301 aacgatgacg gcttcaactt cgtcgccttc tttcagtttg gtggtcaaat cttcaacgcg
     3361 gtcggctgca aattcggaag caggcaggta gccttctact tcgtcagaca gggcgataac
     3421 agcacctttg gcgtcaacag atttcacgga acctttaacc aaagaacctt tgtcgttcac
     3481 gctgatgaag ttgccgaacg gatcgccttc cagttgtttg atacccaagg agatgcgttc
     3541 tttttccacg tcgattgcca atacgacggc ttcgacttct tcgccttttt tgtatttgcg
     3601 tacggcttct tcgccggatt cggtccagga caggtcggac aggtgaacca aaccgtcgat
     3661 gccgccaggc agaccgacga atacgccgaa atcggtaatg gatttaaccg cgccggagat
     3721 tttgtcgcct ttgttgtggt tggcggcaaa ttcttcccaa ggattggctt ggcattgttt
     3781 catacccaaa gagatacgcc ggcggctttc atcgatttcg aggatcatta cttcgacttc
     3841 gtcgcccaat tgtacaactt tgctcgggtg tacatttttg ttggtccaat ccatttcgga
     3901 aacgtgcacc aagccttcga tgccttgttc gatttcaacg aacgcaccgt agtcggtcag
     3961 gttggatact ttaccgaaca ggcgggtacc ttgcgggtaa cgacgggtca ggccgctcca
     4021 aggatcttcg cccagttgtt tcatacccag agaaacgcgt tgtttgtctt ggtcgaattt
     4081 caggacttta gcttctactt cttgaccgac ttccagaact tcgctcgggt gtttcacacg
     4141 gcgccatgcc aagtcggtga tgtgcagcag accatcgatg ccgcccaagt caacgaatgc
     4201 accgtaatcg gtaatgtttt taacgatgcc tttgatgacg gagccttctt gcaggttttc
     4261 cagcagggct ttgcgttctt cacccaaggt agcttccaga acggcgcggc gggacacaac
     4321 aacgttgttg cgttttttgt ccagtttgat cactttgaat tcaatttctt taccttcgaa
     4381 gtgagaagtg tcttttacag gacgtacgtc gaccaaagaa cccggcagga atgcgcggat
     4441 gctgctaatc ataacggtca ggccgccttt gactttgccg ttgatgatgc cggacaggat
     4501 gttgccgttt tccatggctt cttccagggc aatccaatcg gcagcgcgtt tggctttttc
     4561 gcgggacagt ttggtttcgc cgaagccgtt ttcgacggat tcgatggtaa cggtaacgaa
     4621 gtcgccgact ttaacttcaa tttcgccttg agcgtttttg aattcagcta catcaatcag
     4681 ggattctgat ttcagacctg cgtttacggt aacgaagttt tggtcgattg ccactacttc
     4741 agcggtaatc acctcacccg ggttcatttc ttgcagggta aagctttctt ccaacagctg
     4801 agcaaaattt tccatagaca tatataactc ttttcggtac accgccaagg ggtgcggggt
     4861 gggttggtgg atatctgccg tccttggcag ggcagacggg tacataaggt ttcagacggc
     4921 atatggggga tttttatgcc gtctgaaacg taatttgtgc gattatacct gaaaatttaa
     4981 acttcacgat accaatcaag cacttttttt acagtttctt ctatagtcag gcggcttgtg
     5041 tccaaaagca gggcatcggg ctgttgtttc aggggggcaa ctttgcggtt tcggtctgcc
     5101 tcgtctctgg cttcgatgtc ggacaggatg cgctcgaatg ccaaaccttc gcaggggatg
     5161 ccgatttgtt tggcgcggcg ttcggcacgg attttggatt ctgccgtcag gaagatttta
     5221 agttcggctt gggggaagac gaccgatccg gtgtcccgtc cgtcggcaac cagtcctttt
     5281 tcggtcagaa aatcgcgttg gcgttgcagc agggcggcgc ggactttagg caactgtgcg
     5341 actgcggatg cgcccatgcc gatggcttct gtccggatgc cgtctgaaac gtcttcgccg
     5401 ccgagcagga tgcggctgcc tgaaaatacg gcgggcagtt tttttgccag ttcggaaacg
     5461 ttttcttcat cgtgccatcc cacgccttgt ttttgtgcat atagggcagt caggcggtag
     5521 agtgcgccgg tatcgagata atcgtatccc aatgcggcgg caacgcgggc ggcaaccgtg
     5581 cctttgcccg atgcgcccgg gccgtcgatg gcgatgactt tttgtctgtt cataaggggg
     5641 attcctgatg gtttggggta tgggttttgc cgtctgaagg atgtgtttcc cgttggggcg
     5701 gattctacct gttttaaagg acgattgtct aagcagacgg aacgccgcct gcccgaaaac
     5761 atccgacaga agccggcaag ccggttcgga ttccggcgtt gcgggtattg tggcgggcat
     5821 caaggcaatg ccgtctgaaa gaggtatggc cttcagacgg catcgattgc tgcagattag
     5881 aacaggttgc tgacaaaaat cagcaaaatc accaacggca caagatattt cacataagca
     5941 aaccaaatat tgaccgtcgt atggttgcct ttgtaaagca attcttcctt cgcttcgtcc
     6001 ttcatcacaa aaccgacaaa cagcgcgaaa ccgagcgcgg tcagcataaa caagatgttg
     6061 ccgctgatgt agtcgaaggc atcgaaaata tttttgccga acacggaacg tctttccacg
     6121 aaccatagct cagaatggac gggatgttgc cgaaaatgaa gatggcggct aatacaatcg
     6181 taatcgcggc ggtacggcgg attttggttt tttcctgaat ggtcgtaatc aacacttcat
     6241 aaatggtcag cgaagtcgtc aatgcggcaa tcaggagcag cgagaagaaa atcacggcga
     6301 acacagatcc tgcccacata tgcgagaaca caatcggcaa actttggaat accaaagtcg
     6361 ggccggaatc gggggcaacg ccgaagctga agagcgacgg gaaaatcata aagccggcca
     6421 gtacggcgat gatggtattg gtaatggccg tgatgaccgc ggtttgcacc agattttcgt
     6481 tcttatccag atagctggac aaggtaatca tcacgccgaa acccaagctc aaggtaaaga
     6541 acacttgtcc taaaacgaag acgaacagtt cggctgtaat tttgctgaag tcaggtttca
     6601 gatagaaggt aatgccttcc attgcgcccg gcagggtaac gttgcgcaca accatggcaa
     6661 tcaggaataa aaacagcaaa ggcatcaggt attttgctgc tttttcaata ccgccgatca
     6721 cgccttttac caagatccat tggttcacaa ccacaaatag gaaggtgtag aaagcaattt
     6781 cccaaggact gttttcgatg tgttcggtaa agaaactttt ggtgacttcg ctggaaacag
     6841 gactggaaat gtccaaatta ccgccgatga tattaacaat gtagctgata acccagccgc
     6901 cgagcaccat gtaataagcc atgatgccga acgcgccgag cagcccatcc agccgaccag
     6961 tttccaaatt ttggcaatgg gtttgccgtt catcgggccg ccgaacgcat ccagcgcgtt
     7021 cacgcctttg cgccgtccga tgacattttc caccaaaatc atcgggatgc cgataaccag
     7081 catcgcgata cagaataaaa acacatacgc gcaccaccgt tttcaccgac caaatacggg
     7141 aaacgccacg tcgcgccgaa accgacagtc gcgccggcaa cggtcaggat aaaggcttga
     7201 tgttgggtaa gtttgtcatc atcggtgacg gatttggctt tgttggcgat gaccaagccc
     7261 aaatggtgct ggcgagatag gggctgtaag gtggggtgtc gtttcatggg ggttcctgtt
     7321 ggtaaattaa attttattat aaaataaaaa aaccacaaac actagggcga tgtttgtggt
     7381 attgtggcac ataatgctga tcaataattt aaggtataac ttatcccata acttctcccc
     7441 tgtgcagaca agctggataa ttcaccataa gtcactttgg cagcttgact aaatacactt
     7501 ttatattttt tatttgtcaa gttataaatc ccaaagttta actgaccttt aggtagtttg
     7561 atctcaccca ataaatccgc cacgacatag cctgaaattc tagcctccgg ggttttgcgg
     7621 accttttgat tggttttggc aatcaggctg tccttgtaag ctctttgtgt accatcaatg
     7681 gcaagtagtt gtaagcgtaa cttatgttca cttggtgtgg tgtattgagc aaaagcggtg
     7741 gctttggtag ggctgatacg aaacgcccca agttctcgat attgaccgct tgcatctttg
     7801 tattgacctc gtgtataggc aatgctacca ccgacagccc agttatcatt aatcttgtga
     7861 tttaattcaa actccgcccc ataaatacgc tcatcagtat cagcaaccac cacgctataa
     7921 tcttttaaaa actgggttac tttatctgat gtattataaa aacctgtcaa cttggcacgg
     7981 ctaccgccaa acactcctac ccaccctgca tcataactat tgactgaaat tggctcaaca
     8041 ttatcagaat taaccgcaaa acccgtccca acatctctta gcaccctttg taaatcaggc
     8101 aaactatatc cttgcccaaa attggcaaaa atactgtgat ttggagttaa tgagtaattt
     8161 gctccaagat taaataaggt tttgtgatgc ttcactttgc cagaattgac agttcctgct
     8221 tgatacggca ctttattctg gtttaataaa tcggctaata gcgactcact gggtggcaca
     8281 aaaccatctg ttttactgtc tataatttga tgccgtacac ctgccgatat ttttaaatca
     8341 tctgtcaaag caacattagc attggcaaat atgccgtagg tttttaaggt ggtgtcaggt
     8401 ccataagtgt aacggttgcc agtgtcttta aatgccaagc cgttgctttg cataaaggta
     8461 gtcaaatcat agcctgtcgc cccttggcgg tttttttctt gttcataatc gataccataa
     8521 ctaagtagta caggtttttg agcaaggtca aattttcttt gcaaagccag tcttg
//
LOCUS       DAWEYF010000082         8480 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.082, whole genome shotgun sequence.
ACCESSION   DAWEYF010000082 DAWEYF010000000
VERSION     DAWEYF010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.082"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            102..1286
                     /gene="coaBC"
                     /locus_tag="WGN93_001310"
     CDS             102..1286
                     /gene="coaBC"
                     /locus_tag="WGN93_001310"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ0227213.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPIIVANDVSIAMGKPTNQITIIGDDGELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1353..3509)
                     /locus_tag="WGN93_001311"
     CDS             complement(1353..3509)
                     /locus_tag="WGN93_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ0227214.1"
                     /translation="MPAPQPSAPYDPLTVEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTVAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYRELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTREMDAVAEGGIAGHWSYKSDSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPIDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDSE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3601..3807)
                     /locus_tag="WGN93_001312"
     CDS             complement(3601..3807)
                     /locus_tag="WGN93_001312"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ0227215.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3867..4484)
                     /gene="gmk"
                     /locus_tag="WGN93_001313"
     CDS             complement(3867..4484)
                     /gene="gmk"
                     /locus_tag="WGN93_001313"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ0227216.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEANGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSQEVIQRRLLKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLLHIVNACRLKRSRQLGFIADLLENS"
     gene            4612..5211
                     /locus_tag="WGN93_001314"
     CDS             4612..5211
                     /locus_tag="WGN93_001314"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ0227217.1"
                     /translation="MALKTSNMEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5257..6045)
                     /locus_tag="WGN93_001315"
     CDS             complement(5257..6045)
                     /locus_tag="WGN93_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ0227218.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAATGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDSL
                     GMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVKREGLKTVRWHEEAVDLLPAGASKMDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6370..7725
                     /gene="yegQ"
                     /locus_tag="WGN93_001316"
     CDS             6370..7725
                     /gene="yegQ"
                     /locus_tag="WGN93_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ0227219.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHDRNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSIAKQSQYVGHVTEIDENGWATIEVKNR
                     FAVGDSLEIIHPGGNQTIKLEQMARKGQPVDVAPGNGIQVKIPDMQGKEKALIARVLN
                     P"
     gene            7859..8335
                     /locus_tag="WGN93_001317"
     CDS             7859..8335
                     /locus_tag="WGN93_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ0227220.1"
                     /translation="MLAACQSGSAPKNAHTASADTPAGESCKVIRDDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPIANGRNLVTRQAANSVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRSVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
BASE COUNT         2150 a         2317 c         2008 g         2005 t
ORIGIN      
        1 ggggactcag acggcatttt gtatccaaac ggtaactaat gtatccgcac tttgttatag
       61 aatggctgct gtttttttct tcgtaattag aaattgtcaa aatgggtaaa catattcttt
      121 taggtgtaac gggcagtatt gcggcgtata agtcttgcga gttggttcgt ctgctgaaaa
      181 aacaggggca ttcggttacg gtggttatga gccgctcggc aactgaattt gtttctccgc
      241 tgacttttca ggctttaagc ggcaatcctg tcctgaccga cacgcacggc ggcaacggtt
      301 caaacggtat ggaacatatc aacctgaccc ggaatgcgga tgtttttctg attgcgccgg
      361 caagtatgaa taccgtggca aaaatctgta acggcgtggc agataaccta ctgaccagtc
      421 tggcagccgc acggaaatgt ccactcgcca tcgctcccgc gatgaatgtg gaaatgtggc
      481 tcaaccctgc caaccaacgg aatatcgcac aactggtttc agacggcatt actgtctata
      541 tgccgggctt aggcgaacag gcttgcggag aaaatggtat gggaaggatg ccggaacctg
      601 ccgaattgct ggatttgctt ccggacttgt ggacaccgaa aattttaagg ggcaagaaaa
      661 tcttgattac cgcaggtgcg acatttgaag ccattgaccc tgtcaggggc atcacaaata
      721 cctccagcgg aaaaatgggg gtagctttgg cgcgggcgtg ccgtgccgcc ggtgcggaag
      781 tcagcctgat tcacggacag cttcaaaccg cgctgccttt cggcatatcc gatacggttc
      841 aagccgtcag cgctgaagat atgcatcgcg cagtgcatcg tttgattgaa aagcaagatg
      901 cttttatttc tgttgccgcc gtctcagact ataaggttaa aaacaagagt acgcaaaaat
      961 tcaaaaaaga taaaaatgcc aaaccgttat ccatcgaatt ggatgagaac cccgatattt
     1021 tggcttctat tgcctcattg ccaaacccgc cgttctgcat cggttttgcc gctgaaacgg
     1081 agaatgtaat ggcatatgca cgagaaaaac gtattaagaa aaaaataccg ataatagttg
     1141 ccaatgatgt ttcaatcgcg atgggcaaac cgaccaacca gattaccatt atcggggacg
     1201 acggggaact atcttttccc gaaacaagta aagatgaagc ggcgatgcag attgttgaaa
     1261 ggcttgccgt atatttgaac aaataagcaa ttgaacggat aaaccataaa gcgggttgcc
     1321 tgttaatcaa aaggcaaccc gctttacctg cttcaacttc tgatgacttt gcggatatat
     1381 ggaatactat gcagattttg aataatctga ttcaattgat tcagattctt gactttcaat
     1441 aagaatttga attcgacaaa accttccgtt cccgactggg atttagacgg tgtttcgacc
     1501 gactcaatgt ccgcaccgga atcggaaatc gcttgcgcca ttaatgccaa caggccgtgg
     1561 ctgtcttccg attggacttg aagcccgaca cggtagttct gcccattcat attttcccag
     1621 tctgcatcca gctgctgttc ggaatcggac ttcaacaacg tcgggcaggt atccctatgg
     1681 ataatcatgc cttttccctt aaccaacagc aaacggatgg aatcaccagg aacaggatgg
     1741 cagcactctg caaaatgaat atgcccgctt tcctgaccat cgactttaat ggaactgagc
     1801 ctgacctcgc tgccgaaatg ctcccctgcc aactcggcaa tgtgcatggc gacataaaca
     1861 ggcagggtat gccccatacc gacgttgtac agcacttcct caaatgaagt ctgtttgtcg
     1921 ttgagatcgg caaggtattt ttctttgatg ccgtctgaaa gcaggacatc tttgggcagc
     1981 aaactcgaca gggctttttg taagaggctc tctcccaaaa cgaccgcatc gtgccggtta
     2041 aggtttttaa tatattggcg tatggcactg cgcgccctgc cggacacggc gaaattcaac
     2101 catgcaggat ttggtttggc atgttcggat gtaataattt cgacggaatc gccggttttg
     2161 agcttcgtac gcaacggcat catgatattg ttgatacgtg cggcaacggt tttgtgccca
     2221 atatcagtat gcaccgcata agcaaaatcg ataggtgttg cacccttggg caatgttagg
     2281 atttttcctt ttggcgtaag gatatagatt tcgtttggaa acaaatctac cttgacgtgt
     2341 tcaagaaact caatagcatt ggcactgctg gcctgcaaat ctaagatatt tttcagccac
     2401 cggtttgtgt gaagcaccgc ctgatcgacc gtcttagaat ctgatttata gctccaatgt
     2461 ccggcgatac cgccttcggc aacagcatcc atttcccgcg tgcgtatctg aacttcaatc
     2521 ggcaagccgt aagggccgac caaagtcgta tgcagacttt gataaccgtt gcttttcgga
     2581 atagcgatgt agtctttgaa ccgcccgggc ttgggctgat aaagggtgtg caatgcgccg
     2641 agtgcggcat aacaggcggg aatgctgttg acaatgacgc ggaaaccgta aatatccata
     2701 acctcggcaa agcgcagctt tttcgccatc attttctgat ggatgccgta caggtttttt
     2761 tccctgcctt tgattttggc ctctatattc gcgcctacca gcctctgacc gaatgcgcgc
     2821 aagactttgc cgacaacgtc ctgccggttc ttccggctct tgtccattgc tttttttaaa
     2881 gtctcgtaac ggttgggatg aaggttttgg aacgataaat cctgaagctc ccgatacgca
     2941 ttattcaaac ctatacggtt ggcaatttgc gcgtagattt caagggtttc ccttgcaatc
     3001 cggcggcgtt tgtccgggcg catcgaaccg agtgtccgca tattatgcag acggtcggca
     3061 agtttaacga caatcacgcg tacatctttg gtcattgcca aaatcagttt gcggaaactc
     3121 tccgcctgat gctctgcatg atcttcaaat ttgagttttt caagcttgga cagcccgtcc
     3181 accatctcgg caaccgtatt gccgaacacc gccgccattt ccccttttgt cacgcccgta
     3241 tcttccaata cgtcgtgcat cacgcctgca caaagaccct gtatgtccat atgccaaagg
     3301 gcgagctgcg tcgcaacggc aatcggatgc gtgatgtagg gctccccgct tttccgggtt
     3361 tgcccgtcgt gggcacgaaa cgcataggcg acagcttttt caagctccgc ctgttcctcg
     3421 ggcttgaggt aggaggcggt atggaaaagc agggcacgcg cttcgacggt cagggggtcg
     3481 taaggggcgg aaggttgggg ggcgggcatt tcagacggct ttcggtatgt atgtgttttt
     3541 catttcaaac cgtcggactg cacggcggca aagtgttccg gcgtgcgttt ccggcagaat
     3601 ttatttattg cgcgtcaaca gttctgtacc gatatgtccg gcggcgattt cccttaaggc
     3661 ggtaacggtc ggtttgttat tgcggacatc gtccacaagc ggcgtattgc cattttcaag
     3721 ctggcgggcc cgacgggccg ctaccaatgt caggtcaaaa tggttggaaa tttttccggt
     3781 acagtcttcg gtggtaatac gtgccatatt atttgctttc tttcaaaaat atttaaattg
     3841 ggaaaccagg tattttcgcg gtttttttag gaattttcca acaaatctgc aataaatccc
     3901 agttgccgcg accttttcag acggcaggca ttcacaatat ggagcaaatc ctcctccgcc
     3961 cgcgccaagt cgtcattgac cacgacaaag tcgaacaata cggactgttc gatttcatgc
     4021 cttgccttca acagcctcct ttggataact tcctgactgt ccgtcccgcg tccgttgagg
     4081 cgcgcggcaa gtacgtcgaa agaaggcggc aggataaaga tgccgacggc ttccggcagc
     4141 gcgtcgcgaa cctgcgccgc gccctgaacg tcgatttcca aaatcacatc atagcctgcc
     4201 gccgccaacg cattcacgcc ctccgcgctt gtgccgtaat agttgccgaa tacgtctgcg
     4261 tattccaaaa aagcttcctg cgcgataagc gactcaaact cttctttgga aacaaagtga
     4321 taatgtacgc cgtttgcttc gccttcacgc ggcgggcgcg tcgtgtgcga cacggaaacg
     4381 cgcaaaccgt tatggtttgc caatagccga gaaaccagcg tggttttgcc cgtgccggaa
     4441 gcggccgaaa tgataaagat gttgcctttt cgataagcgg acatattttt tacctgtata
     4501 ttttccagcc gattgtatca caacggacac tcggtttcct atttgccgat gcccatattt
     4561 tgccgctatt gttttgattg atttggcaag cggcaggctg acggctacaa tatggcgtta
     4621 aaaacatcaa acatggaaca cgcaatgctg gttcatcccg aagctatgag tgtcggcgcg
     4681 cttgccgaca aaatccgcaa aatcgaaaac tggccgcaaa aaggcatctt attccacgac
     4741 atcacgcccg tcctgcaaag cgcggaatac ttccgccttt tggttgattt attggtttac
     4801 cgctatatgg atcagaaaat cgacatcgtt gctggtttgg acgcgcgcgg cttcattatc
     4861 ggcgcggcac tcgcctacca tctcaacgtc ggttttgtcc ccatccgcaa aaaaggcaag
     4921 ctgccttttg aaaccgtatc gcaaagctac gcgctcgaat acggggaagc tgcggtggaa
     4981 attcacaccg atgccgtcaa acccggttcg cgcgtgctgc tggtcgatga tttggttgcc
     5041 acgggcggca cgatgcttgc cggactggag ctaatccgca aactcggcgg ggaaattgtc
     5101 gaagccgccg ccattttgga atttaccgac cttcaaggcg gcaagaatat ccgtgcaagc
     5161 ggcgcgccct tatttaccct acttcaaaac gaaggctgca tgaagggctg aaaaccgacc
     5221 ctgccgtctg aaaccggcag ggttgttatt atgcgttcaa atcacaccca aatcttgcaa
     5281 gcccctcaac acgccgtctt catcaacgcc ggggcaaaca tatttcgccg cttctttcgc
     5341 cgcctgttcc ccgttgccca ttgccacgcc gaacccgact tctgacagca tttccacatc
     5401 gttcaaaccg tcgccgaacg ccatcacgtc cgccatttcc aaacccaatg cttcaaccac
     5461 gcttctgata ccgtccattt tcgacgcacc cgcaggcagc agatcgaccg cttcctcgtg
     5521 ccagcgcacc gtttttaagc cttcccgttt cacaatatcc gaccagagcg gcatttcgtt
     5581 ttcctccgcg aacaccagca tctgatacac cggtttgctt gaaaaataat ccttatcggc
     5641 aaaaaaatcg ctggcgatat gcttcaaggc gcggcacacg cattccgaca gcgcggacac
     5701 ggcgatcccc tctccgccga caaacgcata atccataccc aagctatcca aatgcgcgca
     5761 aaccctgccc atcaaaccgg catccatcgg tacttcgcgc acagttttac cgtgcagcag
     5821 cgcaaactgt ccgtttatcg ttaccacggc atccataccc gttgccgcca tcatgtccct
     5881 gaccttttcg ggtatcgtcg ccaaagaccg ccccgttgcc aacgccgtca atatgccttt
     5941 gccgcgcaaa gccgccaccg ccgttttcac ggaaggacgc aaggtatccg tatatttgcg
     6001 gtacagcgta tcgtcaatat cgaaaaacac gattttggga ttcatcatat tctctctcgc
     6061 actcaaactg ccgcattgta tcccaatcag gcaaatactt gataaatcct tataaatttc
     6121 ccggcaaaat tgaccgcgaa cacgaaaagg cggataatcc gcccatcttc aaacaccctt
     6181 cagacggcat ttgcagcaat gccgtctgaa acatttttac aaagcacaca aatcatgttt
     6241 caacacacag gacgacacat aaagcgtcgc cctatatgtt gccctgattc ggaaagggtt
     6301 acgtccctcc caaataaagt ctgattctac cgccctaaag ggcggggttt caaccgaaaa
     6361 ggaaacacga tgaaagcacc cgaactttta ttaccggcag gcggtctcga acgtatgcgc
     6421 gccgcctacg attacggcgc agatgccgtt tacgccggca gcccgcgtta ctccctgcgc
     6481 gcccgcaata acgaatttgc caaactcgac gttctcgagc aaggcattaa agaagcgcat
     6541 gatcgcaaca agaaattctt ccttaccgtc aatacgctgc cgcacaactc caaactcaaa
     6601 accttcgttt ccgatatgga gcccttgatt gccatgaaac ccgacgcgct gattatggcg
     6661 gatccgggct tgattatgac cgtgcgcgaa aaatggccgg aaatgccgat ccacctgtcc
     6721 gtacaagcca acaccaccaa ctactggggc gtgaaattct ggcagaatat cggcgtcgaa
     6781 cgcatcatcc tgtcgcgcga attgagtatg gaagaaatcg ccgaaatccg ccaacaatgc
     6841 cccgacatcg aactcgaagt cttcatccac ggcgcattgt gcatcgccta ctcaggccgc
     6901 tgcctgttgt cgggctattt caaccaccgc gaccccaatc aaggcacctg caccaactcc
     6961 tgccgttggg actacaaagt ccacaacgct acggaaagtg atgcaggcga tgcccagctt
     7021 ctgcaaggtt ttaactttga aaaagcccaa gaagaagcca accaaaactt tgaaggcatc
     7081 aacggtcaaa aacgccatcc ctacgccgac aaagtcttcc tgattgaaga gtccaaccgc
     7141 ccgggcgaaa tgatgccgat tatggaagac gaacacggca cctacatcat gaattccaaa
     7201 gaccttcgcg gcattgaagt ggttgaaaaa ctcgccaaaa tcggcgtgga cagtctcaaa
     7261 gtcgaaggcc gcaccaagtc gctttattat gttgcacgtg tcgcccagtc ctaccgcaaa
     7321 gcgattgatg atgccgttgc aggccgtccg tttgattaca gcctgttgag cgaactcgaa
     7381 ggcctcgcca accgcggcta caccagcggc ttcctcgaac gccaccaaac ccaagactat
     7441 caaaactacc tgaccggcca ctctattgcc aaacaaagcc aatacgtcgg acacgttacc
     7501 gaaatcgacg aaaacggctg ggcgaccatc gaagtcaaaa accgcttcgc cgtcggcgat
     7561 tcactcgaaa tcatccaccc gggcggcaac caaaccatca aattggaaca aatggcccgc
     7621 aaaggccagc ctgtcgatgt cgcacccggc aacggcattc aggtcaaaat ccccgatatg
     7681 cagggcaaag aaaaagccct catcgcacgc gtattgaacc cctgagccac aatgccgtcc
     7741 gaaccccgtt ttcagacggc attttgttga atcttacggt acaatggcaa tgatttccca
     7801 cagcaaacaa ggacatccga catgaaaaaa aatcctcata ctctccgccg ccgccctgat
     7861 gctggcagcc tgccaatccg gcagcgcacc taaaaacgcg cacacggcat ccgccgacac
     7921 accggccgga gaatcatgca aagtcatccg ggacgacacc gcaggaagcg gcaaaaacat
     7981 catttaccgt tgctgcaacg gtcaggcggc aataaatgca gccattgcag acggcgtatt
     8041 ggaatcaggg attcccgtca gcttcggcgg cgggggcgta ccgattgcaa acggcaggaa
     8101 tctggttaca cggcaagcag caaacagcgt tggcaaatcc gactccgagg cctgcgaaca
     8161 cgccctaatc aatgccgccc gcaaattcca gcagaccgcc ggcaaactcg gcgggcgcag
     8221 tgttaccggc ttccacagct acttcgacaa gcaaccgctg caaggaggac aatacgactg
     8281 tcaggcaggc tcgttccacg tccgcgtggt catgcgcgcc aatgtcgtcc gttaacatat
     8341 cggcgaccaa aaaattaggc tgtgttttag taatctgttg atttcaatta tttgcaaagg
     8401 aaaagacaat tattttttcg gttaggaaga gacctatcct attgaataca tttaagttaa
     8461 atacgtctat caacactata
//
LOCUS       DAWEYF010000083         8245 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.083, whole genome shotgun sequence.
ACCESSION   DAWEYF010000083 DAWEYF010000000
VERSION     DAWEYF010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8245
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.083"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(207..1592)
                     /gene="pntB"
                     /locus_tag="WGN93_001318"
     CDS             complement(207..1592)
                     /gene="pntB"
                     /locus_tag="WGN93_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ0227221.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFSKLNGKISSSPLQLPAKH
                     KLNALALGVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TSSSGSQEIGEYREVKAADVAEMLKGANSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1658..2041)
                     /locus_tag="WGN93_001319"
     CDS             complement(1658..2041)
                     /locus_tag="WGN93_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ0227222.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRDFLAHTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAAQSTINTLACLFILFRLAFIWCYIA
                     DKAAMRSLMWAGGFACTVGLFVAAA"
     gene            complement(2045..3586)
                     /locus_tag="WGN93_001320"
     CDS             complement(2045..3586)
                     /locus_tag="WGN93_001320"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ0227223.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGWAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQPPSKKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIAGINIFGGFAVTRRMLN
                     MFKKG"
     gene            3876..4709
                     /gene="serB"
                     /locus_tag="WGN93_001321"
     CDS             3876..4709
                     /gene="serB"
                     /locus_tag="WGN93_001321"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ0227224.1"
                     /translation="MPHALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLSDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            4773..5996
                     /locus_tag="WGN93_001322"
     CDS             4773..5996
                     /locus_tag="WGN93_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ0227225.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGADGAY
                     ISFREGVARASEGRRLGVLILCGMLAGGGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIKIIPLAVCMFALIGVIAVWFP
                     EILGNGKAGNQLTFGGLTGWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIS
                     FAAAAAWNSVFPEMPSGSAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6157..7737
                     /gene="purH"
                     /locus_tag="WGN93_001323"
     CDS             6157..7737
                     /gene="purH"
                     /locus_tag="WGN93_001323"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ0227226.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLHKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGQPQIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIHPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANFDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
BASE COUNT         1830 a         2261 c         2334 g         1820 t
ORIGIN      
        1 taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt tgtgtcagtt
       61 tcagatgtag gtgcttattc ggacgggccg tctgaaaatg tttgccccaa tgcaaaaaaa
      121 tcactgcaaa ccttcataaa cggggtttgc agtgattttt tcaaatcaaa cagattgaaa
      181 acctgcgccg aattgttcag acggcattat tttttcagtt cggacagaat gtcatccacg
      241 gttttcttcg catctccgaa acacattacg ctgttttcgt tgaagaacag cgggttttgt
      301 acacctgcgt agccggtatt catcgagcgt ttgaagacga cgacttcttt tgccttccat
      361 acttccaaca cgggcatacc cgcaatcggg ctgttcgggt cggtttgggc ggcaggattg
      421 acggtatcgt tcgcaccgat gaccaagacc acatcggttt cggggaaatc gtcgttgatt
      481 tcgtccattt ccaacacgat gtcgtagggg actttggctt cggcaagcag tacgttcata
      541 tgaccgggca ggcggccggc gacggggtgg atgccgaagc gcacttctgt gccgttttta
      601 cgcaaaagct cggtgatttc ggcaacgggg tattgcgctt gtgcgactgc cataccgtag
      661 cccggggtaa tgatgacact gtttgcgcct ttcagcattt cggcaacatc ggcagctttg
      721 acttctcggt attcccctat ctcttggctg ccggaagatg atgtgccgct gtcgctgccg
      781 aaaccgccgg cgattaccga gacaaacgac cggttcatgg ctttgcacat aatgtaggac
      841 agaatcgcgc cgcttgagcc gaccaacgcg ccggtaacga tgagcaggtc gttggagagc
      901 ataaagcctg ccgctgcggc cgcccagccg gagtaggagt tgagcatgga cacgaccacg
      961 ggcatatctg cgccgccgat ggaggcaacc aagtgccagc cgaatgcgag ggcaatcagg
     1021 gtcataatca gcaggatgaa gccgctgccg tcaatgccga cgaatacgag cagcaacaca
     1081 aacgatacgc caagtgccag tgcgttgagc ttgtgtttgg cgggcagttg cagcgggctg
     1141 ctgctgattt tgccgttgag tttgctgaat gcgaccagcg agccggtaaa ggttaccgcg
     1201 ccgatgaaga tgcctaaata cacttcgacc agatggatgg tgtgcatatc gtgcgaaacg
     1261 ttgcccggcg cgatatagct gttgaagccg accaaaaccg ccgctaggcc gacgaagctg
     1321 tgcagcaggg caatcagttc gggcatttcg gtcatttcca cctttttggc tttgtagatg
     1381 ccgattgccg cgccgatgag catggcgatg atgatccagc ccagtccgtg ggtattgtcg
     1441 gaaaaaacag ttacaaaaag ggcgaccgcc ataccggcga taccggaata gcagccctgt
     1501 ttggcggttt cctgtttgga cagccccgcc agtgagaaga tgaataaaat tgcggcaacg
     1561 atatacgccg ctgttacgag tcctgaagac atggaaattc tccgattttc gatgatttgt
     1621 tttcaatgcc gtccgaactg ttcagacggt atctgtttca agcagccgcg acaaacagcc
     1681 cgacggtgca ggcaaatccg cctgcccaca tcagtgagcg catagcggct ttgtcggcga
     1741 tatagcacca gataaaggcg aggcggaaca ggatgaacag gcaggcaagc gtgttgatgg
     1801 tcgattgcgc cgcattgccg gttgcgtgtg ccgtcaaaac ggcggcggca aacggtgcaa
     1861 aggcttcaaa accgttttgc tgcgcggcgt gggcacgggc ggctgtgcct tgcgtgtgcg
     1921 ccagaaaatc gcgcggattg tggttgtctt taaaccggaa tccgcccgct tttttggcat
     1981 atgccgcaca aaaaagcggc aataggcagg caatcaggat gcaccaatag gcgaaagtca
     2041 tggcttaccc tttcttaaac atattcagca tacgccgtgt aaccgcaaag ccgccgaaga
     2101 tgttgatgcc ggcaatcagg atggcaacaa acgacagcag cgaaacaaag ccgttgccct
     2161 gaccgatttg cagcagcgcg ccgacgacga tgatgccgga gatggcgttg gtcacggaca
     2221 tcagcggcgt atgcagcgag tggctgacat tccaaacgac gtagtacccg atgacgcagg
     2281 cgaggacgaa cacgataaag tggttcaaga atgctgcggg tgcgaccgcg ccgacccaca
     2341 gcactaatac ggcggcgatg acggcaggcg cgagtttttt ccacagggga acgggtttcg
     2401 gctcgggctt ggcggcaggc gcggcttttt tagacggcgg ttgctgcggc tgggcggaaa
     2461 cttgaatcgg cggaggcggg aaggtgattt cgccgtcgcg ggtaacggtc atgttgcgga
     2521 taatcacgtc ttcaaaatcc agcgtgattt cgccgtcttt gttcgggctt aacagcttgg
     2581 tcaggttcac caagttggtg gcgtaaagct gggaagactg tccggcaagg cggtttgcca
     2641 tgtcggtgta gccgatgatt ttcacgccgt tgccggttac ggacaattcg cccgggcggg
     2701 tgagttcgca gttgccgccc gtcgccgccg ccaaatcgac gatgacggag ccggatttca
     2761 tgctttccac catttctttg gtaatcagct tgggcgcggg tttgcccgga atggcggcgg
     2821 tggtgatgat gatgtccact tctttcgcct gctcggcaaa gagcttcatc tcggctgcga
     2881 taaattcgtc gctcatcact ttggcgtagc cgtctccgct gccgcccgat tcttgtggga
     2941 agtcgagttt caggaacttg ccgcccatcg attcgatttg ttccgccact tccaagcggg
     3001 tatcgaacgc gcgcaccact gcgccgagcg agtttgccgt accgatcgcc gccaaacctg
     3061 ccacacctgc gccaatcacc aaaacctgcg cgggcggcac tttgccggcg gcggtgattt
     3121 ggccggtgaa gaaacggccg aaggcgttgg cggcttcaat tacggcgcgg tagccgctga
     3181 tgtttgccat cgaagacaaa gcgtccaaag cctgcgcgcg cgaaatgcgg ggcaccatgt
     3241 ccatcgccag cgcgttcact ttcttggcgc gcaaggcttc gaccaaagcc tcgttttggc
     3301 gcggccacag gaagctgacg atggtttgac cttcgttcaa aagcggcagc tcgccttcgg
     3361 acggcgcatt gaccttataa atcaaagggc aggcccaaac cgccgctttg tcggcaacgg
     3421 tcgcgcctgc tgtttggtaa gcggcatcgt ccaaacttgc cgcccaacct gcaccgcttt
     3481 cgacaacggt ttcaaagccc agtttgccca gcagggcgac ggtggcgggc gtacaggcga
     3541 cgcgggtttc gccggataat gactcgcgtg ggataccgat tttcatctct gaatcctttt
     3601 tcgggttgtt tatatgtatc gtgggttaaa tttaaatcgg ggcggggcgg agcaacgccg
     3661 taccggttta aaaccgattc acttcaaatg ttaatatatt ttagataatc cccttataac
     3721 gaattttcat caggctggca atagttgcgg cattttcccg tgttgtccga cacatactgc
     3781 cgtttgcgtt tgaagtcatt ttccgattgc agtcccgccc gccgtaacat tctttgccgt
     3841 ttcactatat aatccgcatt ttttgagccg ccgttatgcc gcacgccctc gtcctccaat
     3901 ttccctccgc cgaagccctg ccttccgact tcccctcccg cctgcccgaa cctgattgcg
     3961 ctgatgaaaa gcgtatgcgt tttattgttg aagaaggatt ttctttaagc gaaaaagacg
     4021 cggcgttact tggcagccgt caaatcgacc acgccgtgtt gtcggatatg gattttggcg
     4081 aactcggttt gattgtcagc gatatggatt cgacgctgat taccatcgaa tgcgtcgatg
     4141 aaattgcggc aggcgtgggt ttaaaagaca aggtagcgga aattaccgag cgttcgatgc
     4201 gcggagagtt ggatttcgag cagtcgttgc gcagccgcgt tgcgctgttg gcgggattgg
     4261 acgaacagat tttggcggac gtttatgaaa acgttttgaa gctctcgccc ggtgcggaat
     4321 ttttgttgga cgaatgcaaa aggcacgatg tgaaattcct gctggtgtcc ggcggcttca
     4381 cgttttttac cgaacgtctg caacaacgcc tcggcttcga ataccaacac gccaatgttt
     4441 tggaaattga aaacggcagg ttgaccggcc gtctgaaagg cagaatcatc gacgcgcagg
     4501 caaaggcgga tttattgcgc gaataccgca gccgcctcgg attgcagcca catcaggtgt
     4561 tggcgatggg cgacggtgcg aacgatattc cgatgctcaa agaagcgggc ataggcgtgg
     4621 cttaccgtgc caaaccgaaa gcgcgggccg ccgccgatgc ctgtatcaat ttcggcggtt
     4681 tggagcgtgt acgcggcctg ttcggatagg cggataggaa acggatgtcg tccgaaaggt
     4741 tttcagacgg catttgaacg gcaggaacga cagtgggacg cagaaaactt tggtttgccc
     4801 tggcagcagc aggcgttatc ggcggtttgg tcggcattgt gctgacggaa ctgatgcact
     4861 tcatacagca tacggcatac ggttatggcg cggacggtgc gtacatctcg ttccgcgaag
     4921 gtgtggcccg tgcttcggaa gggcggcgtt taggcgtatt gattctgtgc ggtatgttgg
     4981 caggcggcgg ctggtggttg ctcaaacgtt tcggtaagcc gcaaatcgaa atcaaagccg
     5041 ccttgaaaca gccgttgcag gggctgccgt ttctgacgac ggttttccat gttctgctgc
     5101 aaatcataac ggtcggactc ggttcaccgc tcggacggga agtcgccccg cgtgaaatga
     5161 ctgccgcgtt cgcttttgcc ggcggcaggc ggttgggttt ggatgaagac gaaatgcggc
     5221 tgctgattgc ttgcgcttcg ggtgcgggtt tggcggccgt gtataacgtg ccgctcgcct
     5281 ccacactttt tatcctcgaa gccatgctgg gcgtgtggac gcagcaagcc gtcgccgccg
     5341 cattgctgac ttccgtcatc gccaccgccg tcgcgcgcat cggcttaggc gacgtgcagc
     5401 aatatcatcc cgccaacctt gccgtaaaca cttcattact ttggttttcc gccgtcatcg
     5461 gcccgatact gggcgcaacc gccgtctttt tccagcgcac cgcccaaaaa ttccccttca
     5521 tcaagcgcga caacatcaaa atcattccct tggcagtctg catgtttgcg ctcatcggcg
     5581 tgattgccgt ttggtttccc gaaattttgg gcaacggcaa agcaggcaac caactgacct
     5641 ttggcggttt gaccggttgg caacacagcc ttgagctgac cgccgtcaaa tggctggttg
     5701 tcttgatggc gttggcggca ggcgcatacg gcggactgat tacgccgtct atgatgctcg
     5761 gcagcaccat ttcttttgca gccgccgccg cgtggaacag cgttttcccc gaaatgccgt
     5821 ctggaagcgc ggcagtcgtc ggagcggcgg tgtttctcgg cgtatcgctc aaaatgccgc
     5881 tgaccgccat tgtgttcgta ttggaactga cctacgcgcc gctgtccctg ctgctgcctt
     5941 tgtgcatcgg catggcgggg gcattgggaa catcgggaaa aatgggcttc aaataaatgc
     6001 cgacaaatgc cgtctgaaag gttttcagac ggcatttctt tgtaaattgt cagcaatatc
     6061 tgcaaaaacc tactgccaaa aaactagaaa tagcggataa taccgccccg aaaaagttcc
     6121 cctttcccca tccaactgtc agaaaaggaa gccccaatgt ccgtcatcaa acgcgccctg
     6181 atcagcctgt ccgacaaggc aggcgcggtc gaatttgccc aaactctgca caagctcggt
     6241 gtcgaaatcc tctccaccgg cggcacggcg aaactgcttg ccgatgcggg cgttcccgtg
     6301 attgaagtcg ccgactatac cggcttcccc gaaatgctcg acggccgcgt gaaaacgctg
     6361 catccgaaaa tccacggcgg tattttgggt cggcgcgatt tggacgaaca cgttgccaag
     6421 atggaagaac acggtatcgg caacatcgac cttgtgtgtg tcaacctcta ccccttcgcc
     6481 gccaccatcg ccaaaccaaa ctgcacactg gaagacgcga ttgaaaacat cgacatcggc
     6541 ggcccgacta tggtgcgttc cgccgcgaaa aactggaaac acgtcgccat cgttaccgac
     6601 accgccgact tccccgccat tgccgccgaa ctcgaagcca acaacggcgc attgagcgac
     6661 aaaacccgtt tcaacctctc acgcaaagca ttcagccaca ccgcccaata cgacggcatg
     6721 atttccaact acctgacctc cctttcagac gacgttttga gcggccagcc ccaaatcggc
     6781 gaattcccaa gccagttcaa ccaaagctgg attaaagtac aagacatgcg ctacggcgaa
     6841 aatccgcacc agcgcgccgc gttctaccgc gatattcacc ccgccgccgg cagcctcgcc
     6901 gcctacaaac agctgcaagg taaagaattg tcttacaaca acatcgccga tgccgatgcc
     6961 gcttgggaag ccgtcaaatc cttcgacgcg cccgcctgcg tgattgtgaa acacgccaat
     7021 ccgtgcggcg ttgccgttgc agccgatacc ttgaccgcct acaaactcgc ctacgccacc
     7081 gacaccacca gcgcgttcgg cggcatcatc gccttcaacc gcgaagtgga cggcgaaacc
     7141 gtcaaacaga ttaccgacaa ccagtttatg gaagtcttga tggcgccgaa gtttaccgcc
     7201 gaagccctcg aaatcgccgc cgccaagaaa aacgtgcgcg tattggaagt gccgcttgag
     7261 gcaggcgcaa accgcttcga actcaaacgc gtcggcggcg gactgttggt acaaacgccc
     7321 gacatctgcc gcatcagccg cgccgatttg aaagtcgtct ccaaacgcca accgaccgag
     7381 caggaatgga acgatttgct gttcgtctgg aacgtcgcaa aatacgtcaa atccaacgcc
     7441 atcgtgttcg gcaaaggcgg acaaacctac ggcatcggtg caggccaaat gagccgcgtg
     7501 gacagcaccc gcatcgccgc ccgcaaagcg caggacgcca atttcgacct caacggcgcg
     7561 tgtgccgcct ccgatgcctt cttccccttc cgcgacggcg tggatgtgat tgccgaacag
     7621 ggcattaaag ccatcatcca tccggcaggt tcgatgcgcg atcaagaagt cttcgacgcg
     7681 gcagacgaac acggcattgc gatggtggta accggcatcc gccacttccg ccattaaggc
     7741 agatgaacaa ggcaatgccg tctgaagggc tttcagacgg cattttgcgc tattttgtga
     7801 aggtagggat gacggttcgg gtattcctga cagggtggat tttcaaggtg ttgtataggg
     7861 tgtaggagga ttcgtaaaag gtgggatgca gggtgtgctt cagcccgctg catcaaaaat
     7921 ttttggagaa ccggcgggag tcggcggttt tggtttcggc ggggacggtg gaaatgggta
     7981 acattgacgg aatcgacgga agcggtgggc tgaagcccac ccttgtatat tggaatcact
     8041 gtatcatagc aacaaaccgc ctggccgcca cccgcgccca cccaaggcac acaaccgttg
     8101 cgtagctcag ggagcggcag ggcaacccat cgacacaacc ggacagttgc cggacaacac
     8161 aaccgaatgc aaggcaggtt tatgatgagt acccaatacc attacgcagg tatagtgaat
     8221 taaatctaaa ccagtacagc gttgg
//
LOCUS       DAWEYF010000084         8231 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.084, whole genome shotgun sequence.
ACCESSION   DAWEYF010000084 DAWEYF010000000
VERSION     DAWEYF010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8231
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.084"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(130..1062)
                     /gene="cysK"
                     /locus_tag="WGN93_001324"
     CDS             complement(130..1062)
                     /gene="cysK"
                     /locus_tag="WGN93_001324"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ0227227.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVPNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1256..1861)
                     /locus_tag="WGN93_001325"
     CDS             complement(1256..1861)
                     /locus_tag="WGN93_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227228.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1858..2709)
                     /gene="dapF"
                     /locus_tag="WGN93_001326"
     CDS             complement(1858..2709)
                     /gene="dapF"
                     /locus_tag="WGN93_001326"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ0227229.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAEWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVEQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            2846..3142
                     /locus_tag="WGN93_001327"
     CDS             2846..3142
                     /locus_tag="WGN93_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227230.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPTVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3156..3824
                     /locus_tag="WGN93_001328"
     CDS             3156..3824
                     /locus_tag="WGN93_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ0227231.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3897..6017)
                     /gene="pnp"
                     /locus_tag="WGN93_001329"
     CDS             complement(3897..6017)
                     /gene="pnp"
                     /locus_tag="WGN93_001329"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ0227232.1"
                     /translation="MFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYINGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6254..7117)
                     /locus_tag="WGN93_001330"
     CDS             complement(6254..7117)
                     /locus_tag="WGN93_001330"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ0227233.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAEEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7316..8179
                     /gene="rfbD"
                     /locus_tag="WGN93_001331"
     CDS             7316..8179
                     /gene="rfbD"
                     /locus_tag="WGN93_001331"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ0227234.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSAAIIRLLQQSNPVRGIYHYVGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         1967 a         2381 c         1908 g         1975 t
ORIGIN      
        1 cggcgacacc aacacctgat taaaacacaa ccggcgtttt cggcatatat gcaaaaacgc
       61 attttccggc acggcgttac accgataccg aaaaatgcgt ctgaatgttt cgacaatccg
      121 attaaagcat tatgccaaat ctgcaaaaag tggcgtagag agatagcgtt cgccataaga
      181 aggcagcagc acgactatca gcttgccttc gttttcaggc tgtttggcaa gctgcaacgc
      241 actccaaacc gccgcaccgg aagaaatacc caccaaaatg ccttcttttt ccgctattgc
      301 gcgggcggtt tcaaaagccg cttcgttcgg cactttggta atgctgtcgt aaattttggt
      361 attcaaaacg gtcggaataa agcctgcgcc gatgccttga atcgggtgcg ggcctttttc
      421 gccgccgctc aatacgggtg aagcttcagg ctcgacggca accactttaa cttcgggttt
      481 gtattttttc aacacttcgc ccacgccggt aatcgtaccg cccgtgccga cgccggcaac
      541 gaagacatcg actttgccgt ccgtatcccg ccaaatttcc tcggcggttg ttttgcggtg
      601 gacttcgggg tttgcctcat tgtcgaactg gcgcggcata aaataagtgt cgggatgcgc
      661 gtccaccaag gatttcgctt tggcaatcgc gcccgccata ccttcggcgg caggggtcag
      721 aatcagctcc gcaccaaacg cgcgcaacag cattttgcgc tccttactca tgctttccgg
      781 catggtaatc gccagcttgt agccgcgtgc ggcacatacc attgccaaac cgacacccgt
      841 attgccgctg gttgcttcga caatgacggt gtttttgttg attttgcccg ctttttcggc
      901 accctcgatc attgcttcgg caatgcggtc tttgacgctg ctgcctggat tgaaaaattc
      961 cagtttcacg gcaacctccg ccttcaaacc ttcggtcaga cggttcagtt tgaccaaagg
     1021 cgtgttgccg attagttcgg tgatgctgtt tgcaattttc atcttctgct cctgaataat
     1081 aaggtttcga cagtaaggcg caatccccat aggcatcctg tccgattgca ggggatttgc
     1141 gccgaaacat aaacaaattt cggatatggc tttatcctaa acctatgccg cctaaaaaac
     1201 caatatccaa aatttctttc tttataactt tttgttccga tacggccgca ccgtattatc
     1261 ttccaatttc tgaaagcagc agcaccagta ccgagacctg catcaacgct gccgtcaacc
     1321 cgccgagtcg cagctgcgag ccgccgaacg ttgacggcgg ctgccggtct ataccgcagc
     1381 ggtggacata ggcaaccgcc atcagcacaa actgcaacac gaaccaataa accggcttca
     1441 gcgcataaag tttgagcagt gccgcaaaca caaacacttg aaccgttccc gaaaagcaat
     1501 aatgcaccaa cgcacatatt ccgacaaaag caagcgtcat cgatacatta ctgacggcaa
     1561 aaagcccgag cagcggatgt tcggggtctg cctgccatcc gtttccatct gttttccggt
     1621 tccaatgccc gatgaaaaaa aatatgctgc ccaaagtcag gtaaaaatgg gggatgaaca
     1681 agggcgcggc gcgggtcatt ccccatatgc cgggcatcag ctttgccccc aaaaccgata
     1741 tgcccagcca cagcataata ctcgcccaaa accattgcaa cattcctgcg cggaatatca
     1801 gaaacagaaa aaccgccgca tacagtaagg cagacaaaaa atccaaatgc agcaaaatca
     1861 tgaatacgcc aactcgcctt caaacaccgt ttccgcaggg ccggtcatca tcacatcgcc
     1921 gccgcaggcc cattcgatat ataaagttcc gcccggcaaa atcacctcta ccgttttccc
     1981 ttcatccaac aaccccagac ggatacccgc caccacagcc gcacacgcgc ccgtaccgca
     2041 cgcttgggtt tcgcccacgc cgcgctcgaa cacgcgcaaa cgaatcgcgg ttcggctgac
     2101 aatctgcata aagccgacat tgacgcgttc gggaaactgc ctgtgcggtt cgataagcga
     2161 accggtttcg cgcaccggcg cgcattccac gtcatcgacc acaatcaccg catggggatt
     2221 gcccatattg acgcagctga caggctgaat gccggattcg agatgcaccc cgtaaataca
     2281 ggcatcatcc ccctcgcccg attcggggac aaacggtatt tcagacggca taaacctcgg
     2341 tttgcccata ttgaccgtaa ccatgccgtt atcggacaat ttcggaaaaa taacgccatt
     2401 tgccgtttca acacaaattt ctttcttatc ggtcaaaccc ttgtctgcaa caaaacgggc
     2461 aaaacaacgc gctccgttgc cgcattgctc gacctcgcta ccgtcggcat tgaaaatacg
     2521 gtaacggaaa tccacacctt cggtttccga acgcccgacc accaaaagct ggtcgaagcc
     2581 cacgccccgg aagcggtccg cccattccgc aatcggcgcg tcctcggggg taaaatcctg
     2641 actgaccgcg tcaatcacca taaaatcgtt gcccaaaccg tgcattttgg taaatttcaa
     2701 agtgttcata ttgttccgaa atcccgtatc gtctgttgct tccgaatccg aaatcccccg
     2761 caccgaaggg aaatgcttcc atctcccgcc gcctgaggat taaaatcagc cattatactg
     2821 tttgttaccc cttacaagaa acaccatgtt ccgcatatta ctgttgcttt tcccttgtgc
     2881 aatccttgcc gcctgcaccc gaaacatacc ggcaaacccg accgtttcaa attgcgcgca
     2941 tcttcaaaac cgcaccatcc tgtattttga cgcacacggc aaacccgccg acggcgcagt
     3001 aaagggcgga ttttacaaaa ttatcgaaat acagggtgca aactgcatcc ttattcaaga
     3061 ctttaacagc acgggcaatg ccctcggcgg atcctatgtg ccggactgcc gcaaatcatc
     3121 ccttttcccg aaaaatattt gacttcaaac tgcctatgaa ccacgacatc actttcctca
     3181 ccctgttcct actcggtttc ttcggcggaa cgcactgcat cggtatgtgc ggcggattaa
     3241 gcagcgcgtt tgcgctccaa ctccccccgc atatcaaccg cttttggctg atcctgctgc
     3301 ttaacacagg acgggtaagc agctatacgg caatcggcct gatactcgga ttaatcggac
     3361 aggtcggcgt ttcactcgac caaacccgcg tcctgcagaa tattttatac acggccgcca
     3421 acctcctgct gctcttttta ggcttatact tgagcggtat ttcttccttg gcggcaaaaa
     3481 tcgagaaaat cggcaaaccg atatggcgga acctgaaccc gatactcaac cggctgttac
     3541 ccataaaatc catacccgcc tgccttgcgg tcggaatatt atggggctgg ctgccgtgcg
     3601 gactggttta cagcgcgtcg ctttacgcgc tgggaagcgg tagtgcggca acgggcgggt
     3661 tatatatgct tgcctttgca ctgggtacgc tgcccaatct tttggcaatc ggcatttttt
     3721 ccctgcaact gaaaaaaatc atgcaaaacc gatatatccg cctgtgtacg ggattatccg
     3781 tatcattatg ggcattatgg aaacttgccg tcctgtggct gtaagcccca ttcattcccg
     3841 atacccgtaa aaaataccgt ctgaaacctg ttcagacggc actttcaccc taagcgttac
     3901 tcggcggcat tttcctcacg ggcaggcgcg tccagcaggg ctttgatgga cagacggaca
     3961 cggcctctgt cgtccacttc caatgctttc acgttcacca cctgaccgac ttgcaggtag
     4021 tcgccgacat tgcgtacgcg ctcgtgggcg atttggctga tgtgtaccaa accgtctttg
     4081 cccggcatca cactgacaat cgcgccgaca ttgttgtcga ggattttcac cacagtgcct
     4141 tcgtacactt tgcccacttc cacttcggca gtaatctgct cgatgcgttt tttcgccgca
     4201 tcgccggctt cttgagtggt tgcggcaatg gtaatcgtac cgtcttcggc aatattgatt
     4261 tccgtaccgg tttcagcggt aatcgcacgg atggtttcac cgcccttacc gataacttcg
     4321 cggattttgt cttggttgat tttcatcgtg aacaagcgtg gcgcgtgtgc ggacagctct
     4381 tgcgggcccg caacggcggc tttcatctga tccaagatgt gcagacgcgc ttctttggcc
     4441 tgcgccaaag cgatttgcat aatctctttg gtaatgcctt ggattttgat gtccatttgc
     4501 agcgcggtaa cgccttcggt cgtaccagcc actttaaagt ccatatcgcc caagtggtct
     4561 tcgtcgccca aaatgtcggt caggacggca aacttattgc cttccagaat cagacccatc
     4621 gcgataccgg caacgtgtgc tttcaaaggc acgccggcgg acagcaggct caagcagccg
     4681 ccgcagacgg aagccataga ggaagagccg ttggattcgg taatttcgga gaccacgcgc
     4741 atggtgtagc tgaaatcttc aggtttcggc aatacggcca acaatgcacg tttagccaaa
     4801 cgaccgtgac cgatttcacg gcgtttcggc gcgcccatgc ggcccacttc gccggtagag
     4861 tacggcggaa agttgtagtg cagcataaag cggtcggtgt attcgccgga cagcgcgtcg
     4921 atgatttgct cgtcgcgcga agtacccaaa gtcgctacgg caagggcttg ggtttcgcca
     4981 cgggtaaaca atgcggaacc gtgcgtgcgc ggcaatacgc cggtttggat gttcagcgga
     5041 cggacggtgc gggtgtcgcg gccgtcgatg cgcggttggc cgtccaaaat ttggctgcgg
     5101 acgacatcgg cttccaagtg tttgaaaatg cctttgattt cgttggctgc cagcgtgtcg
     5161 gtttcttcgg taatcaaggc ttcttttacc gcactccaag cttcgtccaa tttggcagaa
     5221 cgcgcttgtt tttgacggat tttgaacgct tctttaatgg tttcgccggc aatcccgcgg
     5281 actttggcaa ccagttcctc attggtttca ggtgctttcc aatcccaaag ttccggattg
     5341 acttcgtcgg caaattcatt gattgcattg atggcaacct gcatttgatc gtggccgtaa
     5401 accaccgcgc ccagcatcac gtcttcgggc aggattttgg cttcggattc caccatcaac
     5461 acggcttttg aagtaccggc gaccaccaag tccaattgcg atttcgccaa ttcggcttta
     5521 gtcgggttca aaacgtacac gccgtttata taacccacgc gtgccgcacc aatcggaccg
     5581 gcaaacggta cgccgctcaa caccagcgcg gcagacgcgc ccaacattgc aggaatgtcg
     5641 gaatcgattt cgggatcgac ggacacgacc atcgctacga tttggatgtc gtggtagaaa
     5701 ccttcaggga acagcggacg aatcggacgg tcgatcagac ggctggtcag gatttctttt
     5761 tcgctttgtt tgccttcgcg tttgaagaaa ccgccgggaa ttttgcctgc ggcgtaagtg
     5821 cgctcgaggt aatcgacagt cagagggaag aagtcttggc cttctttcac ttctttgttg
     5881 gtggtaacgg caaccaaaac cacggtgtcg cccatagaga ctttaacggc agcggcggct
     5941 tggcgggcga tttcgccggt ttccaaagta acggtttgat taccgtattg gaaggtctta
     6001 acgtgtttat tgaacattat tgttcctttc aaaataccgc actgctaaaa cactaataat
     6061 gcacactaaa atccgaatgt gcatagttag ggtttcagac cgtgcggcag gttgtaaaca
     6121 agctttcaga cgacatttcg gacgctgaaa gcaattccag attataaagg caaccatcct
     6181 taaaatccag tattgataca ataaaaaggc cgtctgaacc atatttcttt cagacggcct
     6241 tcaaacttaa aaatcaatcc tgagtcagca aagtcaatgc ttcccgatac ttctcgacag
     6301 ttttctgaat cacatcggca ggcactttcg gcgcaggggc ttttttgttc caaccgcttt
     6361 gttccagcca gtcgcggacg aattgtttgt caaaagacgg cggattggtg ccgactttgt
     6421 attggtcggc aggccaaaaa cggctcgaat cgggagtcaa tacctcatcc atcagcgtca
     6481 gcgtaccgtt tgtatccaaa ccgaattcaa atttggtatc gcaaatgatg atgccgcgcg
     6541 atttggcata ttccgccgct tctgtataaa gctgaatcgc tttggcgcgc acttcttccg
     6601 ccaattcttt gccgataatg cgttcgcatt cttcaaagct gatgttttca tcgtgatcgc
     6661 cgactgcggc tttggttgag ggcgtaaaaa tcacttcagg cagttgttgc gcttcctgca
     6721 taccttcagg cagttgaata ccgcaaaccg agccggtttt ttgataatct ttccaaccgc
     6781 tgcctgccag ataaccacgc acaatcgcct ctactttcac cggagtgagc tttttagcca
     6841 cgacggcgcg tttctctaaa gctttggctt cgttttcagg caaaacatcg taaaccgttt
     6901 gaccggtaaa gtggttgggc ataatatgcg ccagtttttt aaaccaaaaa ttggaaatct
     6961 gcgtcagaat ctcccctttg ctcggaatcg ggtcgtccaa aatcacatca aacgcggaca
     7021 ggcggtcgga agcgaccatc agcatacgtt tatcgtcgat ttcatataaa tcgcgcactt
     7081 ttccagaata gatctttacc aaaccaatct cactcatttc gccccccctg aaaatatctt
     7141 gaaaataccg acccgacacc cgacaggttt gaatcacaaa ccgatattct aaccgaagtc
     7201 ggcgcaaaac aatacccatg gcacaaaaag ccaacccgtc aaccgtcggc aaagttttgg
     7261 cactataata ccgacagcaa gtcctacaat acactttcac caaaggaaat acctcatgag
     7321 aatcctattg acaggctcga aaagccaact ggcacgctgc ctgcgcgacc gtcttccgga
     7381 agactgggaa accattgcga cggattccgc atccctagac attaccgatg ccgatgccgt
     7441 ctgcaacatg gtcaaaagtt tccaacccga cgccattgtc aacacggctg cctatactgc
     7501 cgtcgacaaa gcggaaggcg atgcggcagc ggcatttgcc gtcaatgctt ccgccgttta
     7561 caaccttgcc ttggcagcac atcgcgccca tgcccgattc atccacatct caaccgacta
     7621 tatctttgac ggtaaaggga aaaggcccta tcaggaaagc gactttacca atccttccaa
     7681 tgtatacgga caatccaaaa ccgccggcga actgctcgca ctgtctgcca atcccgacag
     7741 ccttatcctg cggacttctt ggctgtttag cgaatacggg gacaactttg tccgcaccat
     7801 gctgaacctt gcgcgggaac gttccccgct gtccgccgtc cacaaccaaa tcggctgccc
     7861 gacctatgcc ggcgacttgt ccgccgccat catccgcctg ttgcagcagt ccaatcccgt
     7921 tcgcggcatt taccactacg tcggcggcaa atccgtatcc tggtacgaat ttgcccaaca
     7981 tattttccaa gcggcatcgc aacagcagac atccttcccc gttcccgaat tgactgccgt
     8041 ttcagacaag gaatatccga ccgccgcccc caggcccgca tacagcattt tggactgccg
     8101 caaaatcgaa aacgacttca gcatcaaacc gtcagactgg caaaaagccc ttgcacaggt
     8161 cgtttccaag ctgctctgat gccgcccgcc tctccgtttc cgccgtcaag caccgccttg
     8221 gcggttttct t
//
LOCUS       DAWEYF010000085         8162 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.085, whole genome shotgun sequence.
ACCESSION   DAWEYF010000085 DAWEYF010000000
VERSION     DAWEYF010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8162
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.085"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            108..1277
                     /gene="prpF"
                     /locus_tag="WGN93_001332"
     CDS             108..1277
                     /gene="prpF"
                     /locus_tag="WGN93_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ0227235.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            1690..2889
                     /locus_tag="WGN93_001333"
     CDS             1690..2889
                     /locus_tag="WGN93_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ0227236.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIEAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLSNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMDKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELVGIL"
     gene            3247..3867
                     /locus_tag="WGN93_001334"
     CDS             3247..3867
                     /locus_tag="WGN93_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ0227237.1"
                     /translation="MAQFFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKEVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRRGCGDTAVFGL"
     gene            complement(3994..4437)
                     /locus_tag="WGN93_001335"
     CDS             complement(3994..4437)
                     /locus_tag="WGN93_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ0227238.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLATPPDRINIGSVVRHLEPMQLVECMGSNNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            4611..4979
                     /locus_tag="WGN93_001336"
     CDS             4611..4979
                     /locus_tag="WGN93_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ0227239.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEETKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            5024..6178
                     /locus_tag="WGN93_001337"
     CDS             5024..6178
                     /locus_tag="WGN93_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ0227240.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVLAWLSAVFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(6235..7107)
                     /locus_tag="WGN93_001338"
     CDS             complement(6235..7107)
                     /locus_tag="WGN93_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ0227241.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVENLWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            7192..8004
                     /locus_tag="WGN93_001339"
     CDS             7192..8004
                     /locus_tag="WGN93_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ0227242.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTISAGREVPHLSAEGVSVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         1774 a         2241 c         2357 g         1790 t
ORIGIN      
        1 ggcgaacccc gacagtttgc ggaatcaaac ggctttggtc ggagtggcag cctaatccac
       61 tataaaaatc gtgggcagag cccacgctac ataaggagaa tctagaaatg ccgcaaatta
      121 aaattcccgc cgtttactac cgtggcggta catcaaaagg cgtgtttttc aaacgttccg
      181 acctgcccga ggcggcgcgg gaagcgggaa gcgcacgcga caaaatcctc ttgcgcgtac
      241 tcggcagccc ggatccctac ggcaagcaga tagacggttt gggcaacgcc agctcgtcca
      301 ccagcaaggc ggtgattttg gacaagtccg aacgcgccga tcacgatgtc gattaccttt
      361 tcgggcaagt ttccatcgac aaaccttttg tcgattggag tggcaactgc ggcaacctca
      421 ccgccgccgt gggcgcattt gccatcgagc aaggcttggt cgataaaggc aagattcctt
      481 cagacggcat ctgcacggtc aaaatctggc agaaaaacat cggcaaaacc attattgccc
      541 atgtaccgat gcaaaacggc gcagttttgg aaacaggcga ttttgagctc gacggcgtaa
      601 cgttcccggc agccgaagta caaatcgaat ttcttgatcc agccgacggt gaaggcagta
      661 tgttcccaac cggcaatttg gtcgatgaaa ttgatgtgcc gaatataggc cgtttgaaag
      721 ccacgctcat caacgcgggc attccgaccg ttttcctgaa tgccgccgac ttgggctaca
      781 cgggcaaaga gttgcaagac gacatcaaca acgatgccgc ggctttggaa aaattcgaga
      841 aaatccgcgc ttacggtgcg ctgaaaatgg gtctgatcag cgacgtatcc gaagctgccg
      901 ctcgcgcgca cacgccgaaa gtcgccttcg tcgcgcccgc cgccgattac accgcctcca
      961 gtggcaaaac cgtgaatgcc gccgacatcg atttgctggt acgcgccctg agcatgggca
     1021 aattgcacca cgcgatgatg ggtaccgcct ctgttgccat tgcgaccgcc gccgccgtgc
     1081 ccggtacgct ggtcaacctt gccgcaggcg gcggaacgcg taaagaagtg cgcttcgggc
     1141 atccttccgg cacattgcgc gtcggtgcag ccgccgaatg tcaggacgga caatggacgg
     1201 ccaccaaagc ggttatgagc cgcagcgcac gcgtgatgat ggaaggttgg gtcagggtgc
     1261 cggaagattg tttttaaatt gacgtagcat gggtttgccc gcgagccata aacaggtcgt
     1321 ctgaaaaaca agtaaacatc aaatcactga ccattccttt cccttgccct gtggcggaag
     1381 gcggcaaatc acaaggaaga acacggaaac cccgataaaa gacagcttcc cgtattaccg
     1441 tcattcccgc gcaggcggga atctagacct gtcaatatgg aggattggta ggggaaaaca
     1501 ggtttcgtga gttctacatt ctggattccc gccacagcct gtcctcgcgt aggcggggac
     1561 ggaataacga tagaaaatgc ggcatacgct ttgcccaaag aggccgtctg aaacaccttg
     1621 cgcctgatgt ctgccttttt cagacgaccc cacaccaaaa aacaaccaca aactacaagg
     1681 agaaacatca tgtccgacca actcattctt gttctgaact gcggcagttc atcgctcaaa
     1741 ggtgccgtta tcgaccgcaa aagcggcagc gtcgtcctaa gctgcctcgg cgaacgcctg
     1801 accacgcccg aagccgtcat tacgttcaac aaagacggca acaaacgcca agttcccctg
     1861 agcggccgaa actgccacgc cggcgcggtg ggtatgttat tgaacgaact ggaaaaacac
     1921 ggactgcacg accgcatcga agccatcggc caccgcatcg cccacggcgg agaaaaatac
     1981 agcgagtctg ttttgatcga ccaagccgtc atggacgaac tcaatgcctg cattccgctt
     2041 gcaccgctgc acaaccccgc caacatcagc ggcatcctcg ccgcgcagga acatttcccc
     2101 ggcctgtcca atgtcggcgt gatggatact tcgttccacc aaactatgcc cgaacgtgcc
     2161 tacacttatg ccgtgccgcg cgagttgcgt aaaaaatacg ccttccgccg ctacggtttc
     2221 cacggtacca gtatgcgtta cgtcgccccc gaagccgcgc ggattctagg caaacctctg
     2281 gaagacatcc gcatgattat tgcccacctc ggcaacggcg catccattac cgccatcaaa
     2341 aacggcaaat ccgtcgatac cagtatgggt ttcacgccga tcgaaggttt ggtaatgggt
     2401 acacgttgcg gcgacatcga tccgggcgta tacagctatc tgacttccca cgccgggatg
     2461 gatgttgccc aagtggatga aatgctgaac aaaaaatcag gtttgctcgg tatttccgaa
     2521 ctttccaacg actgccgcac cctcgaaatc gccgccgacg aaggccacga aggcgcgcgc
     2581 ctcgccctcg aagtcatgac ctaccgcctc gccaaataca tcgcttcgat ggctgtggcc
     2641 tgcggcggcg ttgacgcact cgtgttcacc ggcggtattg gcgaaaactc acgtaatatc
     2701 cgagctaaaa ccgtttccta tcttgatttc ttgggtctgc acatcgacac taaagccaat
     2761 atggacaaac gctacggcaa ttcgggtatt atcagcccga ccgattcttc tccggctgtt
     2821 ttggttgtcc cgaccaatga agaactgatg attgcctgcg acactgccga acttgtcggc
     2881 atcttgtagc caaaaaaggg acgagtccgc acaatgccgt ctgaaacccc aaacgcccga
     2941 ttaggctgat gaggatttta gacggcattg ttcatttttt tgttatcttg catttttgtg
     3001 cggacggtgg aatttcatcc tgtaaacata aatatttgtc ggaaaacaga aaccctccgc
     3061 cgccatttct acgaaagcag gaaaccagca acgcaaagcg acagggattt gttggaaatg
     3121 accgaaaccg aacgaaccgg attcccgcct gcgcgggaat gacgggattt tctgtttttg
     3181 tggaaatgac gggattttga atttcgggcg tacaatacgg aaaacatgac gataaggaaa
     3241 aaaactatgg cacagttttt cgctattcat cccgacaacc cccaagaacg cctcatcaag
     3301 caggcggtcg aaatcgtcaa taaaggcggc gtggtcgttt atccgaccga ttcctgttat
     3361 gccttgggtt gcaaactcgg cgataaggcg gcgatggaac gcatactctc catccgaaaa
     3421 atcgatttga aacaccacct gaccctgatg tgcgccgatt tgagcgagtt gggcacatac
     3481 gccaaaatcg acaacgtaca gtttcgtcag cttaaggccg ccacgcccgg gccttatacc
     3541 tttatcttgc aggcgacgaa ggaagtgccg gcgcgcacgc tgcacccgaa acgcaaaacc
     3601 atcgggctgc gtattcccga taatgccatt gcacaagccc tgctggggga attgggcgag
     3661 ccgcttttaa gctgcaccct gatgctgccc gaagacggcg aaccattgac cgatccttat
     3721 gaaatccgcg agcgtttgga acacgccgtc gatttggtga ttgacggcgg ctggtgcgga
     3781 accgagccga ccaccgtcgt cgatatgacc gacggcacgg aactggtgcg ccggggttgt
     3841 ggcgatacgg cggtgttcgg tttgtaggga aaccgatgcc gtctgaagca tcggctgttc
     3901 agacggcatt gcgcgccttg ccggtggcag tccgaaatgc cggcgcgtat cgcgctcggt
     3961 cggaatatcc gtttgaaacg gcattttgat gcattactgc accgcaatcg gaattctcgg
     4021 ttcgtagagc aggtcgtagg tcggcttgtt gagcaggtct tggagcgtga aaccgtccag
     4081 atacgtgaaa aacgacttca ttgcaccgcc gagtatgcct gtcagacggc aggacggtgt
     4141 aatcaggcat tcgttgttcg aacccataca ttcgaccagc tgcatcggtt cgaggtggcg
     4201 gacgaccgag ccgatgttga tgcggtcggg cggtgtggca agccgcagac cgccgccttt
     4261 tccgcgcacg ctgtggagga agccgccttt gaccagcgcg gtaacgacct tcatcagatg
     4321 gcttttggaa atgccgtagg ttacggcgat ggtactgatg ttgaccagcg catcgtcgtt
     4381 gatggcagtg tagataagga cgcgcagccc gtagtccgta tgttgtgtca aatacatgat
     4441 tttctcggta tggattgtta ttcttatcgg tacggtttaa ggttcacgga caatacctta
     4501 atggttgaaa ccctgtccgt cggggcggta gaatgcagcc tgtctgcggc ggtatgccgt
     4561 ctgaaacatc cgcgctaccg tttgagaatt tgttattgta actcaaaatc atgaaaccgt
     4621 tgaaacgaca tcccgccctt atcgggcttt cgcgtgacca ccaccattcg ctttccctgt
     4681 gcgtgcgtct gttgcggacg ccggaagaaa ggcatcggga cgaactcgaa ccgcattttt
     4741 ccgaattgga aacccatttt cgcgaagaag aaaccaagtt tgccccaatt tggcagaatg
     4801 tcgcccccga attgaaacaa cgtttcgaga aagaccacgc ccgactgcgg cagatgatgg
     4861 caagccccga atacggtaac gcggcgtgga ataccgcttt tgccacaacc ctgcgcgacc
     4921 acgcgcgctt tgaagaacgc gagctgtttc ccgccgccga accgtttttg ccggcatgat
     4981 tccgttttgc ggcaaatata ttaatgataa acaaggaaca cacatgaaat ttaccaagca
     5041 ccccgtctgg gcaatggcgt tccgcccgtt ttattcgctg gcggctctgt acggcgcatt
     5101 gtccgtattg ctgtggggtt tcggctacac gggaacgcac gagctgtccg gtttctattg
     5161 gcacgcgcat gagatgattt ggggttatgc cggactggtc gtcgtcgcct tcctgctgac
     5221 cgccgtcgcc acttggacgg ggcagccgcc cacgcggggc ggcgttctgg tcggcttgac
     5281 tatcttttgg ctggctgcgc ggattgccgc ctttatcccg ggttggggtg cgtcggcaag
     5341 cggcatactc ggtacgctgt ttttctggta cggcgcggtg tgcatggctt tgcccgttat
     5401 ccgttcacag aatcaacgca actatgttgc cgtgttcgcg ctgttcgtct tgggcggcac
     5461 gcatgcggcg ttccacgtcc agctgcacaa cggcaaccta ggcggactct tgagcggatt
     5521 gcagtcgggc ttggtgatgg tgtcgggttt tatcggtctg attggtacgc ggattatttc
     5581 gttttttacg tccaaacgct tgaatgtgcc gcagattccc agtccgaaat gggtggcgca
     5641 ggcttcgctg tggctgccca tgctgactgc catgctgatg gcgcacggtg tgttggcttg
     5701 gctgtctgcc gtttttgcct ttgcggcagg tgtgattttt accgtgcagg tgtaccgctg
     5761 gtggtataaa cccgtgttga aagagccgat gctgtggatt ctgtttgccg gctatctgtt
     5821 taccggattg gggctgattg cggtcggcgc gtcttatttc aaacccgctt tcctcaatct
     5881 gggtgtgcat ctgatcgggg tcggcggtat cggcgtgctg actttgggca tgatggcgcg
     5941 taccgcgctt ggtcatacgg gcaatccgat ttatccgccg cccaaagccg ttcccgttgc
     6001 gttttggctg atgatggcgg caaccgccgt ccgtatggtt gccgtatttt cttccggcac
     6061 tgcctacacg cacagcatcc gcacctcttc ggttttgttt gcactcgcgc ttttggtgta
     6121 tgcgtggaag tatattcctt ggctgattcg tccgcgttcg gacggcaggc ccggttgaga
     6181 caaaccgccg cagatttcgg gtctgggcgg tttgcttttc agacggcagg gcggtcagtt
     6241 gccgtccagc cagcggtcgc gtgtggtttt ggcttcttca aaatagcggt acagggcttc
     6301 gcggtcgtcg gtggtcagga tgtttgccaa aacgtccaac tgtttgccca agccttgaac
     6361 cagttgcagc aggctgtctt tgttggcaag gcagatgtcc gcccacacgg cgggatgacc
     6421 ggaggcgatg cgggtgaagt cccgaaagcc cgtggcggcg aatttcagat attcctgtcc
     6481 gtcggggtgg tcgagaatct ggtggacata ggcgaaggcg gtcaggtggg gcatatggga
     6541 gacggcggcg aaaaccgcgt cgtggcgttg cgcgtccatc gtataaattt ccgcaccgac
     6601 cgcgtgccac aggttttcta ccaaggcaat gccgtctgaa tgttcgccgc cgtgtggcgt
     6661 gatgatgagt tttctgtggc ggaacagccc gaactgcgcg gcttgcgcac cgcttctgtc
     6721 cgaaccggca atcgggtggg cggcgatgca gcggtgcagg cggtcgggca gacagcggcg
     6781 gaaggcttcg atgaccgaag atttggtgct gccgacatcg gaaatccaag tgtgttccgg
     6841 caaaacgggg cgcagcgcgg tcaaaatggc aggaacggtg gcgacgggtg tggcaatcag
     6901 taccaagtcc gcaccgccga tgctgtccgc gtcgatggca acggaagccc ggtcaatcac
     6961 gccgcgttcc aatgcacgtt cgaggttgtc gcggtcggtg tcgataccgg taacggtgcg
     7021 gacgagtccc tgccttttga ggtcgagaac gaacgaaccg ccgatcagcc ctacaccgat
     7081 gagggcaata tggttcaaaa tgggcatttg tgtaaacggt tttcgcaaag taccgtcatg
     7141 gtagcctatc ggcggaatat gccgcaaggt cggcaggaaa aaggagaaga aatggacaaa
     7201 atcagagttg ccgccgtgca gatggtgtcg ggcgtgtcgc cggaaaccaa cgtcgccgcc
     7261 atgaaacgcc tggtcgcacg ggcggcggag cagggtgcgg attgggtgct gctgcccgaa
     7321 tattgggtgc tgatgggcgc aaacgatacc gacaaactcg cgcttgccga gcctttgggc
     7381 ggcggacgct ttcagacggc attgagcgaa acggcgaaag aatgcggcgt ggtgctgttc
     7441 ggcggaaccg tgccgctgca aagccccgag gcgggcaagg tcatgaatac tttattggtg
     7501 tacgggcgcg acggcaaacg gacggggctg taccacaaaa tgcacctctt cggcttttcc
     7561 ggtttgggcg aacgctatgc cgaagccgat accatcagcg cagggcggga agtgccgcac
     7621 ttgtcggcag aaggcgtgtc ggtggcggcg ggcatttgtt acgatgtccg ctttcccgaa
     7681 tttttccgcc gccagctgcc gtttgacgta ttgatgctgc ccgctgcgtt tacgcacacg
     7741 acgggcaagg cgcattggga gctgctgctg cgcgcgcgtg ccgtcgaaaa ccaatgttac
     7801 gtcgtggcgg cggcacaggg cggtttgcac gaaaacggac ggcgcacgtt cggacacagc
     7861 atgattgtcg atccgtgggg cgacgtattg gacgtattac ccgaaggcga aggcatcgtt
     7921 acggcagaca tcgatgccaa ccgcctgaac agcgtccgca accgcctgcc cgccttgaaa
     7981 taccgggttt tggatgccgt ctgaaggttc agacggcatc ggtgccgggg aatcagcggg
     8041 ctgtaggatg ggcttcagcc tgccatttcc atcaatccca catttctacc gttttcatcg
     8101 aatccatcga atccgcccct ttcgacgacc cagtcctacg caactgaacc gtcattccca
     8161 cg
//
LOCUS       DAWEYF010000086         8147 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.086, whole genome shotgun sequence.
ACCESSION   DAWEYF010000086 DAWEYF010000000
VERSION     DAWEYF010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8147
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.086"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            235..1167
                     /gene="pip"
                     /locus_tag="WGN93_001340"
     CDS             235..1167
                     /gene="pip"
                     /locus_tag="WGN93_001340"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ0227243.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIQHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLADALVQAVEDIFPRLL"
     gene            complement(1224..2420)
                     /gene="bamC"
                     /locus_tag="WGN93_001341"
     CDS             complement(1224..2420)
                     /gene="bamC"
                     /locus_tag="WGN93_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ0227244.1"
                     /translation="MPSEAFRRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSHAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKISQDSIRRLFDTVGLGGIYSTGERDKFIIRIEQGQNGVSDIFFAHK
                     AMKEVYGGKNKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKKPILPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAITE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2429..3304)
                     /locus_tag="WGN93_001342"
     CDS             complement(2429..3304)
                     /locus_tag="WGN93_001342"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ0227245.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMTNDTILRLSEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDQLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            3342..3596
                     /locus_tag="WGN93_001343"
     CDS             3342..3596
                     /locus_tag="WGN93_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227246.1"
                     /translation="MLPIVAYFTAGVKSGGSGMHGAAWRRMRRVCIFVFEIRLLRFAN
                     DIPAATVRNLFAGRARMPSEIEIEAVWRIRYNPRFGFFNI"
     gene            3611..5002
                     /locus_tag="WGN93_001344"
     CDS             3611..5002
                     /locus_tag="WGN93_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEZ0227247.1"
                     /translation="MSGHMGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLVFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
     gene            complement(5064..5816)
                     /gene="rlmB"
                     /locus_tag="WGN93_001345"
     CDS             complement(5064..5816)
                     /gene="rlmB"
                     /locus_tag="WGN93_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ0227248.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(5882..6370)
                     /locus_tag="WGN93_001346"
     CDS             complement(5882..6370)
                     /locus_tag="WGN93_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 family protein"
                     /protein_id="HEZ0227249.1"
                     /translation="MTALLVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGY
                     QIYGAGILWLVGLISLAGILTDYVAGIWGTKYTGAGKLAVRGALIGSIIGMFFSLPGL
                     VLGPLIGAAAGELISCRNMIQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            complement(6375..7094)
                     /locus_tag="WGN93_001347"
     CDS             complement(6375..7094)
                     /locus_tag="WGN93_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEZ0227250.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQTGAVQTFLLLKASGLT
                     LTKSTLWQLESLLDGTPPQEMAQAHKARLLAELKNHPPVAAFPPQEEMEHFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIKRVIYGAVEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRSVLSCFFQNKRKG"
     gene            complement(7098..8039)
                     /gene="miaA"
                     /locus_tag="WGN93_001348"
     CDS             complement(7098..8039)
                     /gene="miaA"
                     /locus_tag="WGN93_001348"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ0227251.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTHLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDGQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHMMLE
                     QGFIGEVENLRRRYPGLTADSPAIRCVGYRQAWKYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSGTHLIEAAKRFFGV"
BASE COUNT         1491 a         1898 c         2661 g         2097 t
ORIGIN      
        1 gtacggcgtt gcctcgtctt agctcaaaga gaacgattct ctaaagtgct caagcaccaa
       61 gtgaatcggt tccgtactat ctgtactgtc tgaggcttcg tcgccttgtc ctgatttttg
      121 ttaattcact atatcgtgat ttttcggcat ttgcctttcg gggcggcttg tgtttcgtgc
      181 gtgatgttgc gtgtgggaat gttcggattg tcagaggcaa tatgggagaa gatgatgtat
      241 gagataaaac agccttttca tagcggatac ttgcaggtgt ctgaaattca tcaaatttat
      301 tgggaagagt cgggcaatcc cgacggtgtg ccggtcattt ttttacacgg cggaccgggg
      361 gcgggggctt cgcctgaatg tcggggtttt ttcaatcccg atgtgttccg catcgtcatt
      421 attgaccagc gcggttgcgg acgttcgcgc ccgtatgctt gtgcggaaga caatacgact
      481 tgggatttgg tggcggatat tgaaaaagtc cgtgaaatgc tgggtatcgg gaaatggctg
      541 gtgttcggcg gttcgtgggg cagtactttg tcgctggctt atgcccaaac ccatccggaa
      601 cgggtaaagg gattggtgtt gcgcgggata tttttgtgca ggccgtctga aacggcgtgg
      661 ctgaacgagg cgggcggtgt gagccggatt tatccggaac aatggcaaaa atttgtcgcg
      721 ccgattgctg aaaatcggcg gaaccggctg attgaggcgt atcacgggtt gctgtttcat
      781 caagatgaag aagtgtgcct gtctgccgca aaggcttggg cggattggga aagctatctg
      841 atccgtttcg agccggagga agtggatgaa gatgcttatg cctcgctggc aatcgcgcgt
      901 ttggaaaacc attattttgt caacggcggc tggttgcagg gtgatagggc gattttgaac
      961 aatatcggca aaatacagca tatcccgacc attatcgtgc aggggcggta tgatttgtgt
     1021 acgccgatgc agagtgcgtg ggcgctgtcg aaagcctttc cggaagcgga attgagggtg
     1081 gttcaggcag ggcatcgtgc gttcgatccg cctttggcgg atgcgttggt tcaggcggtt
     1141 gaggatattt ttcctcggtt gttgtaaaaa gttccgcaca aaaaagcagc ttctgtttgg
     1201 aagctgcttt tgttttgaac ggtttaacgc agttcggaat ggagtttgcc caataatgcg
     1261 gatgcgtctt tgccggcata tgcgctgccg tctttgttga gcaggacgat gcgcgagccg
     1321 ttggcgacag gctcggcata gacaatcagt tccggctgtt cggcaggttt ctccgctttg
     1381 cctttgccca gcaggcgttt gaacaggccg ggtttttgtt cggtaattgc attgctttcg
     1441 ttcggggctt tttgaaccag gaaggcgtgg cgttcggtgt tttgaccgac gacggtcagc
     1501 ccgatgcggt cgagggcgag cgcggtgcgc cgccagtttc tgccgtagtc gccaaagaca
     1561 atcaggcttt tgccttcgat acgcgccatt tcgttggcgg cgggaaggat cggttttttt
     1621 gccgatgcgt tttccgcctg ctgtccgtca acgcccaaat attgcataaa gcgcgtcagg
     1681 aaagcggctt cgaggttggg atcggacggg gagggctgcc atacggtcgt gtctttgttt
     1741 ttgccgccgt acacttcttt catggctttg tgggcgaaga agatgtcgga aacgccgttt
     1801 tgaccctgtt cgatgcggat gatgaacttg tcgcgttcgc cggtggagta gatgccgccc
     1861 aagccgactg tgtcgaagag gcggcggatg ctgtcttgcg agattttggc gcggttttcc
     1921 gcccactcgg tttccatttg tccgatggcg ggttcttcgg atttgatgtc gaagccgttt
     1981 tcctgccaaa aggctttcag gagcggccag atttcggcat gagacttgcc gtcgacaacg
     2041 agccagcgtt ggctgccgtc gcgctcgagg cggacacctt tgacgctttt caatacttcg
     2101 gcatcggcag gctgttggac ggcgggtgtg cggcgttttt ccaaatcgct ggcgcggacg
     2161 gcgcccgaac cggcaggcag gcggtagagg ttgccttggt cggggttgtt caaatcaggt
     2221 gggacttcga gtttgatcag gcggtgcgac cggctttggt agtcgagctt gggctgttcg
     2281 gttttgctgc cggagcaggc ggcaagcccg atgagtgcga gcgcggcaat gacgggtttg
     2341 atatgggtca tcgtgtcatc ctgtgtgatg gatattaaag tgtttgttgc gttatgccgt
     2401 ctgaacgctt cagacggcat ggctatattt aaagttgtcc tgaggctttc agggcggcgc
     2461 ggacttttgc ctgtccgcct tccgtcagcg gaacgagcgg caggcggacg tgcggttcgc
     2521 atctgcccag ggcggatacc gcccatttcg gtgcggcggg gctgggttcg cagaacatgg
     2581 tgtcgtaaat cggaatcagc tggtcgttga gttcgcgtgc aagggcgata tcgccttgaa
     2641 gcgcggcgcg gcacatatcg gcaaagagct tgggcgcggc gttggcggct acggtaatca
     2701 cgccgtgtcc gccgcagagc atgaacggta gggcggtgtg gtcgtcgccg gacaggacga
     2761 cgaagccttc gggggcgcgg ttgatgagtt cgatgttgct gccgacgttg ccgctggctt
     2821 ctttaacgcc cacgatattg gggatttctg aaaggcgcag gatggtgtcg ttagtcatgc
     2881 tgacgacggt acggccggga acgttgtaga gtatcatcgg aatcgcggcg gcttcggcaa
     2941 cggctttgaa atggcggtac atgccttctt gcgaaggttt gttgtaatag gggacgacgg
     3001 agagggtgta gtccgcgccg gctttttcgg cggcttggga aagggcgatg gcttcgacgg
     3061 tgttgttcgc ccctgtgccg gcgatgacgg ggacgcgttt ggcaacgtgt ttgacgacgg
     3121 cttcgataac ggcggtgtgt tcttcgacgg agagggtggc ggattcgcct gtcgtgccga
     3181 cggcgacgat gccgtccgtg ccgttttcaa tgtgccagtc gattaagtcg cggagttgtt
     3241 cgtaatggat gctgccgtct tgattcatcg gggtaatcag ggcaaccagg ctaccttgta
     3301 acatacagaa ccttttatca gttgtggtgt agggggcggt aatgcttccg attgtagcct
     3361 actttaccgc aggtgtgaaa tccggcgggt ccggtatgca cggggcggct tggcggcgga
     3421 tgcgtcgggt ttgtattttt gtgtttgaaa tcaggttatt gcgttttgca aacgatattc
     3481 cggcggcgac ggttcggaat ctgtttgccg gacgggcgcg tatgccgtcc gaaatcgaaa
     3541 ttgaagcggt atggcggatt cgctacaatc cgcgctttgg ttttttcaac atttgaagca
     3601 aggaaacatt atgagcggtc atatgggaaa aggggcggat gcgcctgatt tggtgtacgg
     3661 tttggaggat aggccgccgt tcggtaatgc gctgttgagc gcggttaccc atcttttggc
     3721 gattttcgtg ccgatgatta cgcccgcgct gattgtgggc ggcgcgctgg aactgccggt
     3781 ggagatgacg gcgtatctcg tgtcgatggc gatggttgcg tcgggtgtcg gcacttattt
     3841 gcaggtcaac cgcttcgggc cggtcggttc ggggatgctg tctatccagt cggtgaattt
     3901 ctcgttcgtt accgtcatga ttgcgctggg cgcggggatg aaagagggcg gtttgactaa
     3961 ggatgcgatg atttcgacgc tcttgggcgt atcgtttgtc ggcgcgtttt tggtgtgttt
     4021 ctcggcgtgg cttctgccgt atttgaaaaa agtgattacg ccgacggtca gcggtgtggt
     4081 ggtgatgctg atcggcttga gtttggtaca cgtcggtatt accgatttcg gcggcggctt
     4141 cggcgcaaag gcggacggca cgttcggctc gatggaaaac ttggggctgg catcgctggt
     4201 gctgctgatt gtgctggtgt tcaactgcat gaaaaacccg ctgctgcgga tgagcggcat
     4261 tgcggtcggt ctgattgccg gctatatcgt cgcgctgttt ttgggcaagg tggatttttc
     4321 ggcactgcaa aacctgccgc tggttacgct gcccgtaccg tttaaatatg gttttgcttt
     4381 tgactggcac gcatttattg tggcgggtgc gattttcctg ttgagcgtgt ttgaggcggt
     4441 cggcgatttg accgcaacgg caatggtgtc cgatcagccg attgaaggcg aggaatacac
     4501 caaacgcctg cgcggcggcg tgttggcaga cggcttggtg tcggtgattg cgacggcttt
     4561 gggttcgctg ccgctgacaa cgtttgcgca aaacaacggc gtgattcaga tgaccggcgt
     4621 ggcttcgcgc catgtgggca aatatattgc cgtgattttg gtgctgttgg gtctgttccc
     4681 cgttgtcgga cgcgcgttta cgacgattcc gagtccggtt ttaggcggcg cgatggtttt
     4741 gatgttcggc ttgattgcga ttgcgggtgt gcggattttg gtcagccacg gcatccgcag
     4801 gcgcgaggcg gtgattgcgg cgacttcggt cggcttgggc ttgggcgtgg cgtttgagcc
     4861 ggaagtgttt aaaaacctgc ctgtcttgtt ccaaaactct atttccgccg gcggcattac
     4921 ggcagtcttg ctgaatttgg tcttgcccga agataaaacc gaggcggcgg tcaagtttga
     4981 taccgaccac ttggaacact gattttgaaa acgaatgccg tctgaaacag aatccctgtt
     5041 tcagacggca ttgtttttga ggcttacgct ttttcgtttt ttaatacgcg ctgccggcgg
     5101 gtttcgctta ataccattcc ggcagacacg gagacgttca tgctttcgac cgtgccgaac
     5161 atgggtatgg acaccagcat gtcgcaatgt tcgcgtgtca ggcggcgcat accgtcgcct
     5221 tcgttgccca tcacccatgc cgcgctgtcg ggcagatcgc aatggtaaag gtcggcgttg
     5281 ccgcccatat cggtgccgat gatccaaatg ccgtattctt tcagctcgcg cagggtgcgg
     5341 gcgaggttgg ttacggtgat gtaggggacg gtttccgccg cgccgctggc gactttgctg
     5401 acggtggcgt tcagccccgc gcttttgtct ttcggtgcga tgacggcatg tacgcccatt
     5461 gcgtcggcgg tacgcaggca cgcgccgagg ttgtgcggat cggtgatgcc gtcgagtatc
     5521 agcagcagcg gcggttcgct taagttttcc aatacgtctt cgaggtggac gtggtttttg
     5581 gaggcatcga taaatccgac cacgccctga tggcgcgcac ctttgctgat ggcgttgagg
     5641 cggtcggcat cggcaaaata tacgcggatg ttttcgtttg ccgccttttc caacacttcg
     5701 cgcgtgcgta catcgttttt gccttcttgg acatagagtt cgacgatgga tttggggttt
     5761 tgccacaatc gggcgttgac ggcatggaag ccgtagatag gtctttggtt tgccatatgg
     5821 tgctttgtaa aaagggttca gacggcatta tagcaatttg ccggtatgcc gtctgaaggg
     5881 gttaaaacag gtaggcgatg tatttcacca acaggataaa caagatggat acggcgcagc
     5941 cgattttgaa ggccgttccg acgacaagcc ccaacagcgt acccaagccc gctttacctg
     6001 cctgtatcat gttgcggcag ctgatgagct ctcctgcagc cgcaccgatt agcgggccga
     6061 gtacaaggcc gggaagggag aaaaacatgc cgatgatgct gccgatcaat gcaccgcgaa
     6121 cggcgagctt gcccgctccg gtatattttg ttccccatat acctgccaca tagtccgtca
     6181 gtatgccggc aaggctgatg agtccgacca gccacaggat gcctgcgccg tagatttggt
     6241 atccgccggc ataggcaagc agccatgttc cggcaaacat caatgctaat ccggggaggg
     6301 cggggtaaac gatgcccgcc gtaccgacgg ctatcagggc gagggcgagg atgacgagca
     6361 aggcggtcat aggttcaacc ttttcttttg ttctgaaaaa aacagcttaa tacggagcgg
     6421 cattcttctt gcaggattcc gccccgtatg gcggtgtgcg tattgaggcg tttgtcggca
     6481 aacaggttga cgatgctgcc tgctgcgcca gttttgggtt ctaccgcacc gtatatcacg
     6541 cgcttgattc gtgcctgtat cagtgcggac gcgcacatgg cgcagggttc gagggtgata
     6601 tatatgtcgc atccgtcaag gcggtagttt tgcatttcgc tgcctgcctg tgccaaggcg
     6661 ttgatttcgg cgtgtcggct gacattgcag tcggcaatgc aggtgttgtg tgccgatgcg
     6721 atgattttgc cgtcggaaac gatgactgcc ccgacgggta tttcgccgtc ggcggcggat
     6781 tgttctgctt ggcgcagtgc ttcgcgcatg aagtgttcca tttcttcctg cggcggaaag
     6841 gcggcgacgg gcggatggtt tttcaattcg gcaagaaggc gggctttatg cgcttgcgcc
     6901 atttcttgcg gcggtgtgcc gtccagcagc gactcgagtt gccacagcgt gcttttcgtg
     6961 agggtcaaac ctgatgcctt caataacaag aaggtttgaa ccgcgccggt ttgacgcagt
     7021 tcttcgagcg tacggatacc gagcctgtgt agggcggcga cggttttggg ggcgagcggc
     7081 ggcgtggtca gcatagttta tacaccgaaa aaccgttttg ccgcctcaat cagatgtgtg
     7141 cctgaagtgc cgtctgaaaa cgggtcggca acgcagtcta aaggtgtttt gcgcaaccaa
     7201 gtcagttggc gtttggcaag ttggcgggtg gcggcaatgc ctttctcgac aaatgccggg
     7261 aaatcggttt ttccatccag atatttccat gcctgacggt agccgacgca gcggatggcg
     7321 ggggagtcgg cggtcaggcc gggatagcgg cggcgcaggt tttctacttc gccgataaag
     7381 ccctgttcga gcatcatgtg gaaacgcagg gcgatgtttt catgcaggcg ggcgcggttt
     7441 tcgggaatca gggcggcggt atgcaaatca aaagggagcg tatgggaggt tgggctgccg
     7501 aggtgcgtac tcatcggttt gccggttaaa taataaactt ccaaagcgcg tccgatacgc
     7561 tggccgtcgt tcggtttcag acggcatgct gtttcagggt cgactttttg cagggtgcgg
     7621 tagagaaaat ccaagccgta catttgtttt tgttcgtcca agtcggcacg caggcaggca
     7681 tcggcttcgg gcaaatcgtt caaaccttgg gtcagggcgc ggaaatacat catcgtgccg
     7741 ccgacaatca gcggatattt cccacgcgcc gtgatttcgc caatcagatg cgtgcagtct
     7801 tcgacaaaac gggcggcact gtatgtctga acaggcgtaa tgatgtcgat aaggtggtgc
     7861 ggtacaaagg aacgctcggc atgagacggt ttcgccgtgc cgatgtccat atcgcggtaa
     7921 accagcgcgg aatcgaggct gatgatttcg acaggcaggg tttcggcaat tttgagggcg
     7981 agcgcggttt tgcctccggc ggtcggcccg agcagggcaa aggctttcgg ggtcggcatg
     8041 atgtttcagg gttgcgaaaa tgcggattat agcggaaagc gtgccgacgt tatattttag
     8101 tttgcggaag cacgccgacg gcaagggggc gtgtttaccg tatgcct
//
LOCUS       DAWEYF010000087         8028 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.087, whole genome shotgun sequence.
ACCESSION   DAWEYF010000087 DAWEYF010000000
VERSION     DAWEYF010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8028
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.087"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(303..2339)
                     /locus_tag="WGN93_001349"
     CDS             complement(303..2339)
                     /locus_tag="WGN93_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ0227252.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     TRTDWANTVERLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLGLADLQPWDLG
                     YAGEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSAHEETGVPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(2427..3299)
                     /locus_tag="WGN93_001350"
     CDS             complement(2427..3299)
                     /locus_tag="WGN93_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ0227253.1"
                     /translation="MEIWNRLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3569..5959
                     /gene="gyrB"
                     /locus_tag="WGN93_001351"
     CDS             3569..5959
                     /gene="gyrB"
                     /locus_tag="WGN93_001351"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ0227254.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIISDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            6058..7443
                     /locus_tag="WGN93_001352"
     CDS             6058..7443
                     /locus_tag="WGN93_001352"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ0227255.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLVGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNILGNQVLPKHPNGLRFTAYASDGTVLNEQVYYSVGGGFVVTEEDFDRQAETEK
                     AVPYPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETKIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(7514..7612)
                     /locus_tag="WGN93_001353"
     CDS             complement(7514..7612)
                     /locus_tag="WGN93_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ0227256.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
BASE COUNT         1849 a         2219 c         2233 g         1727 t
ORIGIN      
        1 cctgattttt gttaatccac tataaaatgc cgtctgaagc gttgtttgac cgtttcagac
       61 ggcattttta tcaaattcaa aaatattccg tcattcccgc gaaagcggga atctagaacg
      121 taaaatctaa agaaaccgtt ttatccgata agtttccgca ccgacagacc tggattcccg
      181 cctgcgcggg aatgacggga ttttggctta ctgtttttgt gaaaatggcg aaaccgtgca
      241 aatgctgatg ccgtctgaaa cactgtttga ttgtttcaga cggcattttt tgttcacatc
      301 gatcaagccg cgttgtcgaa accgctgtgg cgcaagagtg cgtctatgcg cggttcgcgt
      361 ccgcggaagg ctttgaagga ttctgccgcg ctgcgcgatc cgccgacggc gaggatttcc
      421 tgccaaaagc gtttgcctgt ggcggcgaca tcgtcgcttt cttcaaaggc ggcgtatgcg
      481 tccgcgctca atacttccgc ccatgcgtag ctgtaatagc ctgcggagta gccgccggcg
      541 aagatgtggc cgaagctgtt ggcgaagcgg ttgtattcgg gcggtcggac gacggcgact
      601 tctttgcgca cgctgtctaa aacctgttgc cagtttttca gacggccttc gtcgtcttcg
      661 ctgtaaatca tcatatcgaa gagggcgaac tccatctggc ggacgaggaa cattccgcgt
      721 tggaagtttt tggcggcgag cattttgtcg aagagttctt tcggcagggg aacgccggtt
      781 tcttcgtggg cggacatttg tgccaagaca ttgtattccc agacgaagtt ttccatgaac
      841 tggctgggca gttcgaccgc gtcccattct acgccgttga tgccggatac gcccagttcg
      901 tccacttggg taagcaggtg gtgcagcccg tgtccggttt cgtggaagag ggtgaggatt
      961 tcgtcgtggc tcaaacgcgc ttctctgccg ccgacgggcg gggcgaagtt gcagacgagg
     1021 taggcggtgg gcagttgcag cgtgccgtct gaaaaacggc ggcgaccttt gtagtcgttc
     1081 atccacgcgc cgccgcgttt gccttcgcgt gcgtacaaat ccatataaac gccgcctatg
     1141 gtttcgccgt tttgttgcaa ttcaaaatag cgcacgtctt tgtgccagac ggggacggtt
     1201 ttttcggtaa atccgatgcc gtaaagtttt ttgatttggg cgaacagtcc gtttaatact
     1261 ttgccgacgg ggaagtattt tttgacttcg gtttcgctga acgcgtattt ggcttcgcgc
     1321 agtttttcgc cagcatagcc caagtcccac ggttgcaaat cggcgagacc gaggctttcg
     1381 cgggcgaagg ctttgacttc ggcgaggtct ttttcggcgt agggtttggc gcggcgggcg
     1441 aggtcgtgca ggaagtttaa aacttgttcg ggggtgtccg ccattttggt tgccagcgac
     1501 aattcggcgt agtttttgaa gccgagcagt ttggcggttt gcagggcgtt tgcgagcgtg
     1561 cggtcgatgt tggcggtgtt gtcgaatttg ccgtcgtctg aaagttcgct ggcgcgggta
     1621 acgtaggcgc ggtagatttg ttcgcgcagt tcgcggttgt cggcgtattg gatgacggcg
     1681 aggtagtgtg gaatctgcaa gccgattttg tagcctgttt tgctttcgct ttgcgcggcg
     1741 gcggcaaaca tggcgagcgc gtcttcggga atgccggcaa gcggtgcggc atcgtcaaag
     1801 taaatgccga acgcgtcggt cgcgtctagg acgttttggg agaatttggc ggaaagttgc
     1861 gcgccttcgg tttgcagttt tgccagttct gcctgctgtt cgggcggcag ttccgcgccg
     1921 ctgaggacga aatcgcgcag atcgtggttg agtttggttt tttgtgcggg ggagagggtg
     1981 tcgaattcgg gggaattttt gatggttttg aagcggttgt acagctcgat gtcttgtccg
     2041 atttcggtga agaagacggt gatttcgggc atcagttcgt tatagacggc gcgcagttcg
     2101 ggcgtgtcgg cgacggagtt gaggtgcgac accacgcccc aaatcctgcc gacgcgctcg
     2161 gtgatgccgg tcagacgctc gacggtgttc gcccagtcgg tgcgcgtttg ggctttgatg
     2221 gcggcgattt gttcgcgcgc ttcggcgatg gcggtttgca gggcgggttt gatgtcttcg
     2281 gttttgattt ggtcgaaacg gggttcttcg cccaagtgga gcagtgcgtt gtcagtcata
     2341 agatgggttt cctttgcgtg ttgtgcttca gacagcatat cggcaatatg ccgtctgaag
     2401 ccggaaatgg ggtcggtcag ggaaagttaa agtgtttcgg agccggcggg gtaatttaac
     2461 aggcggtatt gtacgcgcaa aaattcgtcc ataaccgcct gttggatttc cagccgcttt
     2521 gaaacggggg aggcgaagcg gacgatgatg cggtatgcct tgtcatcgta cggcacgcgg
     2581 gtaacgcgcg gtctggcggc gggcgtgata aacagttttt ccgcctgcac gttttccaaa
     2641 tgccgttgga tggcggggat gtagggcgcg cacaagggct cgagtacggc tttcagacgg
     2701 catacggctt catccgaatc caaatggatg ggaacgggga tttcgaccgt atggatgaca
     2761 tagtcgccca aaatattgtc gcggcgcacg gggtggctca acaacaggct gttggggaaa
     2821 gaaacggtgg ttcccgcaag ctgtccgacc agggggttcg gaccgacctg catcatcagc
     2881 gtgttcaaca ggttgatgtc gaccacgcgc ccgcgcaggc cgttgatttc gatatagtcg
     2941 ccgaccgagt attgctgggt ggcagacctt aaaatactgc ccgacagaca cataatcagt
     3001 tcctttgtcg ccacgacgac cgccgccgcc accgcaaaca tcgacaaagc cagcgtttgg
     3061 atttgcgccg accagataaa tgccagcgaa aacagcacca aaagcagcgt tatattgcgg
     3121 ctggcaacca aaaaccgccg cttgctttcg atgccgaaat ccggatgccg tttgaagtgg
     3181 atattcaaca gaagggcgcg cgccagcagc aaagccgcaa ccgccgccac ggattcgacc
     3241 gcctccgcac gtatcgggac ggcaccgagc caagtgtcca acctattcca tatttccatt
     3301 tccgcgcccc tgtccgaaaa gtatagggtg tagattttag tggcaaaaaa acgcttttgc
     3361 cactttacgg gacaatcccc gacctgatgc cggaggcaaa cgtaccgttt catcttttcc
     3421 cggcggcaca ctgatgcgga taacgctgaa ttaggcggca aaatcggcta taatacacaa
     3481 ttatatatgt cgtcccgccc gctttttcta caaggtgcgg acttgttttg gcggcatcgc
     3541 aaaatctttt caaaatccgg caaaaaatat gactgaacaa aaacacgaag aatacggcgc
     3601 cgacagcatt caggtgctcg aaggcttgga agcggtacgc aaacgccccg gcatgtacat
     3661 cggcgacacg caggacggca gcggcctgca ccatatggtg tttgaagtat tggacaacgc
     3721 catcgacgaa gcgctcgccg gacattgcga caaaatcacc gtaaccatcc atgccgacca
     3781 ttccgtcagc gtggccgaca acggccgtgg catgccgacc ggcatccacc cgaaagaagg
     3841 ccgctccgcc gccgaagtca tcatgaccgt cttgcacgca ggcggtaaat tcgacaacaa
     3901 cagctacaaa atctccggcg gcttgcacgg cgtgggcgta tccgtcgtca acgcgctgtc
     3961 cgactgggtt acgctgacca tctaccgcga cggcaaagaa cacttcgtcc gcttcgtgcg
     4021 cggcgaaacc gaagagccgt tgaaagttgt cggcgattcc gacaagaaag gcacgaccgt
     4081 acgcttcctc gccagcacgg aaactttcgg caacgtcgaa tacagcttcg acatcctcgc
     4141 caaacgcatc cgcgaacttt cgttcctgaa caacggcgtg gacatcgaat tgaccgacga
     4201 gcgcgacggc aaacacgaaa gcttcgccct ttccggcggc gtggctggat tcgtgcaata
     4261 catgaaccgc aaaaaaacgc ccttgcacga aaaaatcttc tacgcgttcg gcgagaaaga
     4321 cggcatgagc gtcgaatgcg caatgcaatg gaacgacagc tatcaggaaa gcgtgcagtg
     4381 cttcaccaac aacatccctc agcgcgacgg cggtacgcac ctgaccgcgt tgcgccaagt
     4441 gatgacgcgc accatcaaca gctacatcga agccaacgaa gtcgccaaaa aagccaaagt
     4501 ggaaaccgcc ggcgacgata tgcgcgaagg tttgacctgc gtgttgtccg tcaaactgcc
     4561 cgaccccaaa ttttcgtccc aaaccaaaga caaactggtt tccggcgaaa tcggtcccgt
     4621 cgtcaacgaa gtcatcagcc aagccctgac cgacttcctc gaagaaaacc ctgccgaagc
     4681 caaaatcatc accggcaaaa tcgtcgatgc cgcccgcgcg cgcgaagccg cccgcaaagc
     4741 ccgcgaaatc acccgccgca aaggcgtaat ggacggcttg gggctacccg gtaaactcgc
     4801 cgactgccaa gaaaaagacc ccgcattgtc agaactttat ctggtcgagg gcgattctgc
     4861 aggcggttcc gccatgcagg ggcgcgaccg caaattccaa gcgattttgc cgcttaaggg
     4921 caagattttg aacgtcgaaa aagcgcgctt tgaaaaaatg ctcgccagtc aggaagtagc
     4981 cgctttgatt accgcgttgg gcgcgggcat cggcaaagaa gaattcaatg ccgagaagct
     5041 gcgttaccac cgcatcatta tcatgaccga tgccgatgtg gacggcgcgc atatccgcac
     5101 cttgcttttg accttcttct accgccaaat gcccgaactg gtcgagcgcg gctacatcta
     5161 tatcgcccag ccgcctttgt ataaagcgaa atacggcaaa caggaacgtt acctcaagga
     5221 cgagttggaa aaagaccaat ggctgctcgg tcttgccttg gaaaaagcca aaatcatttc
     5281 agacggccgc accatcgaag gcgcagaact tgccgacacc gccaaacaat tcctgttggc
     5341 aaaaaccgtc atcgaacagg aaagccgctt cgtagacgaa ctcgtcctgc gcgccatgct
     5401 acacgcgtcg cccattgatt tgacgtcgtc tgaaaacgcc gataaagccg ttgccgaact
     5461 ttccggtctg cttgacgaaa aagaagtcgc cctcgaacgc atcgaaggtc atgaaggaca
     5521 ccggttcatc aaaatcacgc gcaagctgca cggcaacgtc atggtcagct acatcgaacc
     5581 caagttcctc aacagcaaag cctaccaaac cctcacccaa accgccgccg cgctcaaagg
     5641 catggtcggc gagggtgcca agctttacaa aggcgaaaac gggtacgacg cggacagctt
     5701 tgaaaccgct ttggacatct tgatgagcgt tgcccaaaaa ggtatgtcca tccaacgata
     5761 caaaggcttg ggcgagatga accccgagca gctgtgggaa accacgatgg atcccgccgt
     5821 gcgccgcctg ttgaaagtgc gcatcgaaga tgccattgcc gccgacgaag tgttcgttac
     5881 gctgatgggc gacgaggtcg agccgcgccg tgcctttatc gaaaacaacg cgctgattgc
     5941 ccaaaatatc gacgcataag tgccgtttta aaaaaggaga cgggcatcgt gccgcgtctc
     6001 cttttggttt gtcaaacgga agccatgccg tctgaaaccg cctttcggag caaaaccatg
     6061 gtcagcattt ttgatatttt caaaatcggt atcgggcctt ccagttcgca tacggtcggc
     6121 ccgatgaagg cagccgccgc ctttgcggca ggtttggatg cacaggctgt tcgcatcgtc
     6181 atcgacattt acggctcgct cgccctgacc ggatacggac acggtacatt tgacgcgctg
     6241 atgctcggtt tggaaggcag cctgccgcac gacatcccgc ttgtcggcat tcccgaacgc
     6301 ctcgaacgca tccgcacgca gcacatcctc cggctcaacg ggcaagaaat ccgcttcatc
     6361 cccgaccgcg acctgaacat actcggcaat caagtgctgc ccaaacaccc caacggcctg
     6421 cgttttaccg cctatgcttc agacggcacg gtattgaatg aacaggttta ttattcggtc
     6481 ggcggcggct ttgtcgttac cgaagaagat tttgaccggc aggcggaaac ggaaaaagcc
     6541 gttccctatc cctataccag ttgcgccgaa ctgcttgccc gatgccgtct gaaccggctc
     6601 gacatctccg aagtcgtgtt ggcaaacgaa gccgcgcttg ccggatgcgg cgaagccgaa
     6661 atccgccgcc gcgccgctgc cgttgccgag gttatggaag gctgcatcaa acgcggcttg
     6721 ggtgcggacg gcgaactgcc cggcggattg aacgtccgcc gccgcgcccc gcagcttgcc
     6781 gccaagctca aagtcctgcg cgaaaccaaa atcgtcaaca cccagctctg gccgatggtg
     6841 tacgccatgg cggtcaacga agaaaacgcc gccggcggac gcgtcgttac cgcaccgacc
     6901 aacggcgcgg caggcatcat tcccgccgta ttgcactatt tccgcaagtt caatccgcac
     6961 gccacacagg aacgcgtcga aaacttcctg ctcaccgcag gcgcaatcgg catcctctac
     7021 aagaccaacg cctccatttc cggtgcggat gtcggctgtc agggcgaagt cggcgtagcg
     7081 tgttcgatgg cggcgggcgc atacgccgaa gtcatcggcg gcacgcccaa acaagtggaa
     7141 aacgccgccg aaatggcgat ggaacaccat ttggggctga cttgcgaccc cgtcggcgga
     7201 ctggtgcaaa tcccctgcat cgagcgcaac ggcatcgccg ccgaaaaagc cctcaaactc
     7261 ggcaccctcg cgctcttgga agacggcacg gacaaaaaag tctcgctcga cgaagtcatc
     7321 cgaaccatgc tgcaaaccgg ccgggatatg aaggcgacct acaaagaaac ctcgcttgcc
     7381 ggactcgccg ccacgctccg gaaaaaagcc gtccccgtat ccgtgcgcgt ggtcgagtgc
     7441 tgaggatgga cagaaacgaa aatgccgtct gaaaacagtt ttttagacgg catttcattt
     7501 atttcttgcg gctttaccgt ttcagtgcca gcgtcaacac gcccgccgta accagcccca
     7561 agcctatcca ttcctgcgtg ttcgggcgtt cgtctaagaa aaccaccgcc atcaggaatg
     7621 caaaccggcg ttgtttgcag catccggcaa gaatttttaa aaggtctttt ctaaaatatg
     7681 cagatattcg aatgtcgaat ttgccttatg attacggttt tctgtcttat ctgccttaaa
     7741 ccgccggtat tccgtttgaa ccaaatcata tttgccgaaa cgctcaaaaa tctcccttac
     7801 ctgcccgaca gacatcaagc cttcgttgtt gtagctgaga aaatatattg aaagtccgca
     7861 tccctaatca aagcctcaaa taccggaatc acatgcgatt ttgagcaagt ccgcgctaaa
     7921 acacatcgta cagcgcaaaa ccggatggga atggcaaaat ccggaaacaa acatttttca
     7981 aagcatacaa acaaaaaaat accaaccgga ggttggtatt ccttaact
//
LOCUS       DAWEYF010000088         8020 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.088, whole genome shotgun sequence.
ACCESSION   DAWEYF010000088 DAWEYF010000000
VERSION     DAWEYF010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8020
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.088"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(68..814)
                     /locus_tag="WGN93_001354"
     CDS             complement(68..814)
                     /locus_tag="WGN93_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ0227257.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(993..1664)
                     /locus_tag="WGN93_001355"
     CDS             complement(993..1664)
                     /locus_tag="WGN93_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ0227258.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WGN93_001356"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WGN93_001356"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ0227259.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLMMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /locus_tag="WGN93_001357"
     CDS             complement(2481..2963)
                     /locus_tag="WGN93_001357"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ0227260.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /locus_tag="WGN93_001358"
     CDS             complement(2995..3684)
                     /locus_tag="WGN93_001358"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ0227261.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPIADTLKCADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIHPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WGN93_001359"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WGN93_001359"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ0227262.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVAHTETKRSGKLKVIRADENELAEHG
                     RYLDGLGEACIWRKTQMPSENGGTEA"
     gene            complement(4571..5881)
                     /locus_tag="WGN93_001360"
     CDS             complement(4571..5881)
                     /locus_tag="WGN93_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0227263.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WGN93_001361"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WGN93_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ0227264.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="WGN93_001362"
     CDS             complement(6056..6355)
                     /locus_tag="WGN93_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227265.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="WGN93_001363"
     CDS             6706..7902
                     /locus_tag="WGN93_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ0227266.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAAVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         1886 a         2405 c         1958 g         1771 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcggtgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcac gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacagggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatctctga accggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tattccgttt tcgagtacgc cggtgatttt gttgatttcg tcttccatca
     1861 tcagcggttt gtcgatattc aagccgtgga catcgacgat ttggttgccg taaaaagtgg
     1921 tgtagccgat acgcaattca ggctgtccgc ccatagcgag cagtttgcgc gaaacaaggg
     1981 aacgcgcgct ttcgacgact tccacgggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcgtc cgcaatgcag acgaattttt ctgatgcgct ggcgacgatt ttttcgttga
     2101 ggtgtgcgcc gccgccgcct ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 caatatagac cgccaacccc gatacttcgt tcagggaaac gacgggaata tcatattggg
     2221 caagcagttc actggatttt ttggaagtag ataccgcgcc tttgattttt ttgccgctct
     2281 tacccaaggc ttcgatgaaa aagttgatgg tcgagccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatccgt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacggcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcatcgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggtggat gcccaatttt tcgacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagcccgg cgcggaaaag
     3181 ctgcggcgtt tgcgcctgcc aaaggctcgt ccgctcgacg gttgcactaa tgttcccacc
     3241 gtccgcgcac ttgagcgtat cggcaatggg aattgccaaa atcccacctt cggcagcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcaac gcgcggcatc
     3361 gtgtaccaga atattgtcgg tttccgccgc caaaccggtt tccaacagtt ttgccacacc
     3421 gttgcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacggcctca tgccgttcaa aaatcccaag cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatac tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagggcgata tttttgcgtt tcatgcctcc gtcccgccgt tttcagacgg catctgcgtc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatc gcccgtgctc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagtttg ccgctgcgtt tggtttcggt atgcgccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaattg ccgccgcgtc
     3901 atcgctaaat aaacttcgcc caaaagctcg cagtcgatca gcgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctctatc gtcagaccgt gcaccctcgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca gaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tttctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc agcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgctg ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgata gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atggcggtaa aaacgggctt gtgccgcacc gtttcacgca
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg ggtatcggca gccttggcgg
     5281 gtacggacgg cataaacagg ctgccgaccg tgcctcctac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac agcaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgtgcttc cgattcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtcccgatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat acccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgttagaat agcctgcttc ttttatcaac cgtttcagac
     6601 ggccccacta ctttcccgcc taggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcaccgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaataaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggtttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtgat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aagcccgctt cggcaacgcc
     7801 gccgtgatta ccactgccga cagcaaagcc gttgccgtgg tcattccgac taacgaagag
     7861 ctgatgattg cccacgacac tgcccgtttg agcggtctgt aaggttttat ccgcacacga
     7921 actgcctccg gaaatggagg cagttttttt atccggcttt ccatgcttaa acagcactgc
     7981 ctcttttcag acattgacgg ttgcagccgc ttacctgaac
//
LOCUS       DAWEYF010000089         7983 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.089, whole genome shotgun sequence.
ACCESSION   DAWEYF010000089 DAWEYF010000000
VERSION     DAWEYF010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7983
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.089"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WGN93_001364"
     CDS             complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WGN93_001364"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ0227267.1"
                     /translation="MSDNRLDAARRHSLFLARNLDSGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDAIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRDTKSPQHLSVVAMGKAGGYELNVSSDIDLIFTYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGNSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRNLHRQIRS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKLAELGIMP
                     SENVETLLAAYRFLRDIEHRLQYWDDQQTQTLPTSPEQQQLLAESMGFDSYAAFSDGL
                     NVHRNKVNQLFNEILSEPEEQTQDNSEWQWAWQDKPDEEGRRCRLKAHGFDAETVAAR
                     LDQIRHGHKYRHLSAHAQPRFDAVVPLFVQAAAEQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAEIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRRFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALSGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLANYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWRDVFGEEAATA"
     gene            complement(3151..3354)
                     /locus_tag="WGN93_001365"
     CDS             complement(3151..3354)
                     /locus_tag="WGN93_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227268.1"
                     /translation="MGFWNGVAKAVGEGMIEAANEHKALKMEYAEKSSEELHEIVKSD
                     GFFKNSTREKGAAYAVLKERGEV"
     gene            complement(3491..3964)
                     /locus_tag="WGN93_001366"
     CDS             complement(3491..3964)
                     /locus_tag="WGN93_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ0227269.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(4017..4298)
                     /locus_tag="WGN93_001367"
     CDS             complement(4017..4298)
                     /locus_tag="WGN93_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227270.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4385..4708)
                     /locus_tag="WGN93_001368"
     CDS             complement(4385..4708)
                     /locus_tag="WGN93_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227271.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(5041..6048)
                     /locus_tag="WGN93_001369"
     CDS             complement(5041..6048)
                     /locus_tag="WGN93_001369"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ0227272.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGKDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6280..6516
                     /gene="acpP"
                     /locus_tag="WGN93_001370"
     CDS             6280..6516
                     /gene="acpP"
                     /locus_tag="WGN93_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ0227273.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6672..7919
                     /gene="fabF"
                     /locus_tag="WGN93_001371"
     CDS             6672..7919
                     /gene="fabF"
                     /locus_tag="WGN93_001371"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ0227274.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1842 a         2120 c         2069 g         1952 t
ORIGIN      
        1 tagaatgcgc tattttaatg gaaacggcgg ggttttaaac ggttcttatt tgtttgtttt
       61 gatttttgct tgggtaaaaa atcccatcat tcccacaaaa acagaagcct gaaatcccgt
      121 cattcccgcg aaagaggaat ccggtttttg ggtttcagcc attcccgata aatcgcttta
      181 gctctgccgc aaccttaaaa cggcacggta cgaaaatacc gtctgaaacc cagattgtca
      241 ggcttcagac ggcatttttt gttcaggcgg ttgccgcttc ttcgccgaac acgtcccgcc
      301 acaatttcct gacattgccg taatgtgcca acagttcgcc ggttacttcg gtttttgccg
      361 cgtcgcgcag tttggtgttg tgctgctgcc ggcggtagaa gcggtaggcg gtgcggcttt
      421 gttcggcgag gtttttgtcg ataaggctgc agtcggcggc gatattcaag agggcgatgt
      481 tgccgtagtt ggcgagaagt tgcggatatt ttcgggcatg ggcaaggatg aggtattgga
      541 cgataaattc gacgtcgacc acgccgccgc gtgcgtattt gacgttgctg tcggcaggcg
      601 gatgggtggg gaacattttt tcgcgcattt cgatgatttc gcctgacaag gcggtttggt
      661 cgcgttcggc ggtgaggatt tcggtgcgga tgcggtcgaa ggccgtctga atttcgggcg
      721 tgccgcagat gaagcgggcg cgggtaaggg attggtgttc ccacgtccag gcgttttcgc
      781 gctggtattt ttcaaaggcc gcgatgctgt gggcgaggaa accggcgtcg ccattagggc
      841 gcaggcgcag gtcggtttcg tagaggctgc ctgcgccggt ggcggcggaa agccagttgg
      901 tcaggcgacg ggcgaggcgg ctgtacacgt cgcctgcgtc ggggtgggga tcgtcgtaga
      961 gatagacgag gtcgaggtcg gaggcgtagc cgagttcttt gccgccgagt ttgccgtaac
     1021 cgacgacggc gaattgcggg gtgtcgcggt gttttttggg catgtccgcc cacgcgcaca
     1081 gcagggcggc ggcgaggatg gtgtcggcga gggcggagag ttggtcggag agggattcta
     1141 ccgtccacag tccggcgagg tcttggacgg cgagacggaa gacttgggcg tgctggaagc
     1201 ggcgcagggt gtccatttgc gcttcagtat cgccgccgca ggctttgagg tcgtctgaaa
     1261 gggcggcggc gagtgcctgc caatcaaacg cggtatccaa aagctgcgcg ctgatgagtt
     1321 cgtccaacaa aatcggatat ttgttcagat acgccgccac ccaagaactt tggcccataa
     1381 tctctgccag ttgcgccaag gtttgcggat gttcgttgag gaaggcgaga taggcggatc
     1441 ggcggctgat gttttcgaga aaatccaaca gccgcatcaa tgtatcggtc gggttgcttt
     1501 gctctgccgc cgcctgtacg aacagcggca caaccgcatc gaaacgcggc tgggcgtgtg
     1561 cggaaagatg gcggtattta tggccgtggc ggatttggtc gagccttgcg gcgacggttt
     1621 cggcatcgaa cccgtgcgcc ttcagacggc atcgccgccc ttcttcgtcg ggcttgtcct
     1681 gccatgccca ttgccattcg ctgttgtctt gcgtttgctc ttcgggttcg ctcaaaattt
     1741 cgttgaacaa ctgattgact ttgttccgat gaacattgag accgtctgaa aaagcggcat
     1801 agctgtcgaa gcccatgctt tcggcaagca gttgctgctg ttcgggcgag gtcggcaggg
     1861 tttgggtttg ctggtcgtcc cagtattgca ggcggtgttc gatgtcgcgt aggaagcggt
     1921 aggcggcaag cagggtttcg acattttcag acggcatgat gcccagctcg gcaagttttt
     1981 tcagcgtttc ctgcgtgcct ttcagttgca gcgcgcgcat ttgtccgccg cgtatcatct
     2041 ggaaaatctg ggcgataaac tcaacttcgc ggatgccgcc cgcgccgagt ttgatgttgt
     2101 ccgccatgcc ttttttgctg acttcgctgc ggatttggcg gtgtaggttc cgcatcgcct
     2161 catacgcgcc gtaatccaga tatttgcgga acacgaaggg gcgcaccagc gatttgatgt
     2221 cgttcggata cggcgtaacc acacggcctt tgcaccacgc gtagcgttcc cattctcgcc
     2281 cctgtgtaat caaatattgc tccagcgcgg tttcgctcaa taccaacgcg cccgaattac
     2341 cgtccggccg cagccgcata tcgacgcgga acacctgtcc gtcggcggtg atgtcgttca
     2401 gcagcgcaat cagtttctgc ccgactttgg tgaaaaactc ttgattgccc cgttcgcgcc
     2461 tgccgtcggt gtcgcccgat tcgggatagg tgaaaatcaa atcgatgtcg gaagacacgt
     2521 tcaactcata gccgcccgcc ttgcccatcg ccaccacgct caaatgctgc ggcgatttgg
     2581 tatcacgccc gatcggcgtg ccgtacatgt cccgataata ggcgtaggca aaatccagcg
     2641 cggtattgac ggcaaaatcg gcaaacagcg taatcgtgcg ggttacttcg ttcaaatcgc
     2701 tgatacggtt gatatcgcgc acgataatct gcgacaccac ataacggcgc aacccgcgca
     2761 actgccgcgc caactcttcc tcgttttctt ccgcacggat tgcgtcccag tcggcaaagg
     2821 cttggaaatc cgcttcggtc aacaccttgt ccaacatcgg caggaaaatt tcgggcttga
     2881 gtttgccgga atcaaggttg cgggcgagaa acagggaatg gcggcgggcg gcgtcgaggc
     2941 ggttgtcgga catttcagat tccgtttgga aggatgacgg gaagatgatg gcggattcac
     3001 ttcaaatcag gacagggcga ggggatgccg taccggttta aagtcaagcc actatatcat
     3061 agcaaccttc gatgccgtct gaaaccttac cccgacatcc agacggatgc ctgccgataa
     3121 aaaacagcgg caaatgccgc cgtttcctgt tcacacctcg ccacgctctt ttaaaacagc
     3181 ataagccgca cctttctccc gtgtggaatt tttaaaaaaa ccatcactct ttacgatttc
     3241 atgcagctcc tcacttgatt tctccgcata ttccattttc aacgccttat gctcattggc
     3301 tgcttcaatc attccctcgc ctactgcttt tgccacacca ttccaaaaac ccataatcat
     3361 gtcctccaat cgtttcaaat aaataaggtc gttgtttctg tcaagaaaca acgacagttt
     3421 ataaactgtc ggaaaacaaa atgccgtctg aaggccggat aatgcttcag acggcatcgg
     3481 attgccggtt ttaaccctgc cctccgccgt tgttcaaata gtgttcccag tgagaatata
     3541 accgggcaat attttcttca taggtgtggg cagaaggaat ataaccgtct ttgggcggca
     3601 tatacctgac aaatgattct atttcttccg gataatcaaa atctgcataa attttttcaa
     3661 cttcccccaa aggatcctca aattcttctt ttctatggaa tacatcgctt aagaggacgt
     3721 acagccaatt tttaggggaa taatccctca tttccgaagc caaatcttcc agaacaggct
     3781 ttaattcaag aatattggat ttgttgatta aagatagttt gaacacacgt tcatcatgat
     3841 ctgaaagcgt catttttcgg gcataagctg ccacatcagc ccaacccaag tatttattcc
     3901 cataccccca cagaatatcc ttccaagaaa gacggacttt ttgcgcggtt aaatcaaggt
     3961 tcatttttta ctccgattgc ctgccccgtc attccgcccc ttccgattga cgcctgttac
     4021 gaaaagtctt ccaaatgacg gctgattgcc tcttcaacag tcggatgcca atccataaat
     4081 gaagcctgca attcctctaa aaccaactca ttgaataaat catccaaatt ccgccaatcc
     4141 gttttttcat ccggatagat gaaatttgcc ataacgacag tatgtttgtt ttgggaataa
     4201 tccgataagg cgcaaatcat cagataccgc cccgaatgct ccagataaaa aattcgtttt
     4261 tccaaaggaa accggttatt ccgttgcccg ttttccattt ttcatccttt ttaacgtatc
     4321 ggcttccgcg tccttcaaat tgagttacct gccttccgcc aagcaaacgc ccgcgcccct
     4381 ttcatcattt gaatatccgt ttgaccatat ttaccagata actatcttct ttatataaat
     4441 caatcagcaa aggcacgata cccggctcat aaaataattc tgtcgtatca gatgtttctt
     4501 ttaacgcgga aattatctcc aacagttcat acccgtatcg gggataagca aacaaatagg
     4561 ggactgcttc ccgcaaacat gaaaatgctt cgtaactttg catttcccat atatgttcat
     4621 ctttaaaatc actcaaatac cattcatcca attcactttc cggatcggat atcaatcgga
     4681 taaattcatt tagttcgtcc ttaaacatat caaatcctta aatataaaat cttttgatta
     4741 tccgccgtat ccttattttc cacatcatga atttcaacgc cgttcatatt ttgcgttttc
     4801 ccaagccgtc cgccacagta taaaattatt ttttgtatca attgcttata tatttaacaa
     4861 cttaccgccg gacttgcttt ggctgcgtat caagattgtc cggttcgcgg cgggcgtttg
     4921 ctttgtttca aacagggcgg cgcgtaaggg attttcaagg ggcggcaggc ggaaaaagga
     4981 aatgaaaatg ccgtctgaac ggcaaaacgt gcgtttagac ggcattttgg gcgggacgcg
     5041 tcatcgcgcc aaagccttca aacattcttt gaccaatgcc ggacctttgt atatcaatcc
     5101 gctgtacact tggacggcgg tcgcgcccaa gcggatttta tctgccgcat ccttgccttc
     5161 cataatgccg cctacgccga taatcggcag cttgccgtcg atgtggtctg ccaacagctt
     5221 caacacccga ttactttttt catgaacggg cagcccgctc aaaccgccct gctcgcctgc
     5281 gagcggatgg ctgccgagac ttgatttgtc gatggtggta ttggtagcga tgatgccgtc
     5341 catttcgacg gatttgacaa cgtgggcgat gtcttcgatt tgtgcttcat ccaaatcggg
     5401 ggcgattttg acggcgagcg gaacgtattt cccgtataca gaggcaagct gtgcctgttt
     5461 gtttttcaaa gcctcaagca atgcgctcaa ctcgtcgcca ccttgcagcg cgcggaggtt
     5521 tttggtgttg ggcgaggaaa tattgacggt aatgtaactt gcgtgtgcgt aggctttttc
     5581 aaggcagatt aaataatcat cggcagcgtt ttcgatgggt gtaaccgcgt ttttaccgat
     5641 gttgatgccc aatacgccac tgaatttact tttttcgatg ttgcgtatca tggtgtcgat
     5701 accgtggttg ttgaaaccca tgcggttgat gatgccttgg tgttcgggaa cgcggaagag
     5761 gcgcggctgc gggttgccgg gctgcggttt gggcgttacc gtgccgattt cgatgaaacc
     5821 aaagccgagc gcgcccaatg cgtcgatgta ttcgccgttt ttgtcgagtc cggcggcaag
     5881 tccgacaggg ttgggcaaat ccatacccat caattttaca ggtttggtac ggttgccggt
     5941 tacgggaatc agacccaatt tataaaccgt gtagagcgcg tcgagcgtga agtggtgggc
     6001 tttttcggca tcgagtgcaa acaggatgcg gcgggcaagt ggatacatga cagggctttc
     6061 tgcttcagat ggaaatgccg ccattttaac cgaaatcccg ccaaacatac ggcacacagg
     6121 tcaaacttga acgacaaaac ccgccgcacc caaaaatgta caaatcggca aatattgata
     6181 taatagtcat tagatagaaa actctattaa aagtcggtac aataccaccg atttatttcc
     6241 cttaaacaac ctgccgcaag gcataaagga acgactgata tgtcaaacat cgaacaacaa
     6301 gttaaaaaaa ttgttgctga acaactgggc gtaaacgaag ccgacgtgaa aaacgaatct
     6361 tctttccaag acgacttggg cgcggattct ttggacaccg tggagctggt tatggctttg
     6421 gaagaagcat tcggctgcga aatccccgac gaagatgccg aaaaaatcac caccgtccaa
     6481 ctggctatcg actacatcaa tgcccacaac ggctaaccgg tcgtcgcccg acacaacagc
     6541 ctctgctgca ccgcgcaata gaggcttttc ccttatatgg caaactgttt gaacccctgc
     6601 cgcaaattac agacggcatc tgcacgacag ccgcatatgc ccccattccg acaaccaaca
     6661 gcgaggttat catgagtcag agaagagtag tcattacagg cttaggtcag gtttcccctg
     6721 tcggcaacac tgtcgcagag gcttgggaca ccctgctcgc tggcaaaagc ggcatcggcg
     6781 cgattacccg ctttgacgca tccgacatca acagccgtgt cgccggcgaa gtgcgcggtt
     6841 tcgacatcgg acaatacatc agcgcgaaag aagcgcgccg gatggacgta ttcatccact
     6901 acggcattgc cgccgcattg caggcaatcg ccgattcggg cttggacgat gtggaaaacc
     6961 tcgacaaaga ccgcatcggc gtgaacatcg gttccggcat cggcggactg cccagcatcg
     7021 aggtcaccgg caaagccgta atcgaaggcg gcgcgcgcaa aatcaaccct ttctttatcc
     7081 ccggttcgct gatcaacctg atttccggac acgttaccat cctcaaaggc taccgcggcc
     7141 cgagctacgg gatggtttcc gcctgtacca ccggcgcgca cgccatcggc aattccgccc
     7201 gactgatcaa atacggcgac gcggacataa tggttgccgg cggcgcggaa ggcgcaatca
     7261 gcactttggg cgtgggcggt tttgccgcga tgaaagccct ctccacccgc aacgacgacc
     7321 ccgccaccgc ttcccgtccg tgggacaaag gccgcgacgg cttcgttatc ggcgaaggcg
     7381 cgggcatatt ggtgttggaa gaattggaac acgccaaaaa acgcggcgcg aaaatctacg
     7441 ccgaaatcgt cggcttcggc atgagttccg atgcttacca tatcaccgcg ccgaacgaag
     7501 aaggccccgc ccttgccgtt acccgcgcgc tgaaagatgc cggcatcaat cccgaagacg
     7561 tggattacgt caacgcgcac ggcacgtcca cccccttggg cgatgccaac gaaaccaaag
     7621 ccctcaaacg cgcgttcggc gaacacgcct acaaaaccgt cgtcagctcg accaaatcca
     7681 tgaccggcca cctgctcggc gcggcgggcg gcgtggaggc cgtgtacagc attttggcga
     7741 tacacgacgg caaaatcccg ccgaccatca acatttttga acaagacgtt gaagccggct
     7801 gcgatttgga ctactgcgcc aacgaagcgc gcgacgcgga aatcgacgtt gccatttcca
     7861 actccttcgg cttcggcggc accaacggca cgctggtctt caaacgcttc aaaggctgat
     7921 tccgcaaagc cgccgccgac atcgaaatgc cgtctgaaac cgtttcagac ggcattttta
     7981 tag
//
LOCUS       DAWEYF010000090         7884 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.090, whole genome shotgun sequence.
ACCESSION   DAWEYF010000090 DAWEYF010000000
VERSION     DAWEYF010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7884
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.090"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..143)
                     /locus_tag="WGN93_001372"
     CDS             complement(<1..143)
                     /locus_tag="WGN93_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ0227275.1"
                     /translation="MSVQTVTYNKFFMNTNQPAVYDPLTRALHWLTVAGFIGILTTIV
                     LWT"
     gene            385..1539
                     /gene="obgE"
                     /locus_tag="WGN93_001373"
     CDS             385..1539
                     /gene="obgE"
                     /locus_tag="WGN93_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ0227276.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            1622..2671
                     /locus_tag="WGN93_001374"
     CDS             1622..2671
                     /locus_tag="WGN93_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ0227277.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3359..4780
                     /locus_tag="WGN93_001375"
     CDS             3359..4780
                     /locus_tag="WGN93_001375"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ0227278.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPPADPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4863..5642
                     /gene="xth"
                     /locus_tag="WGN93_001376"
     CDS             4863..5642
                     /gene="xth"
                     /locus_tag="WGN93_001376"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ0227279.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            5629..5973
                     /locus_tag="WGN93_001377"
     CDS             5629..5973
                     /locus_tag="WGN93_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227280.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            5984..6514
                     /locus_tag="WGN93_001378"
     CDS             5984..6514
                     /locus_tag="WGN93_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ0227281.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGDVPRDWAQKQADTWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6743..7858)
                     /gene="asd"
                     /locus_tag="WGN93_001379"
     CDS             complement(6743..7858)
                     /gene="asd"
                     /locus_tag="WGN93_001379"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ0227282.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIETILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
BASE COUNT         2070 a         1952 c         2037 g         1825 t
ORIGIN      
        1 atcgtccaca ggacaatggt ggtcagaatg ccgatgaagc cggcaacggt cagccagtgc
       61 agcgcacgtg tcaacgggtc gtaaacggca ggttggtttg tgttcataaa aaacttatta
      121 tatgtaacgg tttgaacgga cattccgtcg ggtcggaatg tcaaaaaggc gcgattgtac
      181 caaagaagtt ggacataatt ttgtttgcag gctgaagatt tgcttaaaaa ttcattaaga
      241 tgggcggaac aaatagtttg ggtacggcgt gttgaaatac cgcttatccc ttataatagc
      301 gtccgaaatt ctgttcagac ggcatcaaaa cacacggtaa tccgtctgaa ccccccattt
      361 gaaaccaaca aacaagagca ttgaatgaaa ttcatcgacg aagcaaaaat cgaagtcgcc
      421 gcaggcaaag gcggtaatgg cgcaaccagt ttccgccgcg aaaaattcgt accgcgcggc
      481 ggcccggacg gcggcgacgg cggcaaaggc ggtagcgtct gggcggaagc cgacgaaaac
      541 accaacaccc tcgtcgaata ccgcttcgtt aaacgctacc aagccaaaaa cggcgaaaaa
      601 ggccacggtt ccgaccgtta cggcgcaggt gcggacgaca tcgtcctcaa aatgcccgtc
      661 ggcaccctca tccgcgacct cgacaccgac gaaatcgttg ccgacctcac ttaccacgga
      721 cagcgcgtct gcctagccaa aggcggcaaa ggcggcttgg gcaacatcca cttcaaatcc
      781 tccgtcaacc gcgccccaaa acaatccacg cccggcgaag aaggcgaagc ccgttccctg
      841 caactcgaac tcaaagtcct cgccgatgtc ggcttattgg gtatgcccaa cgccggcaaa
      901 tccaccctga ttaccgccgt atccgccgca cgccccaaaa tcgccaacta ccccttcacc
      961 accctgcatc caaacttagg cgtggtacgc atcgacgaaa accacagctt cgtgatggcc
     1021 gacatccccg gcctgattga aggcgcggca gaaggcgcgg gtttggggca tcgtttcctc
     1081 aaacacttat cgcgcaccgg attattgctg cacgtcgtcg atttggcgcc cttcgacgaa
     1141 accgtcaacc ctgccgaaga agcccttgct atcatcaacg aattgcgcaa atacgatgaa
     1201 gaactttacg gcaaaccgcg ctggctggtg ctgaataaac tcgacatgct tgacgaagaa
     1261 gaagcccaaa cgcgcactgc cgccttcctc gaagccgtcg gctgggacta ccccaaaccc
     1321 gacgaccgtt tccaatttga catggaaacc ccgcgcctct tccaaatcag cgcgctgacc
     1381 caccaaggca cgcaggaatt ggtacaccaa atcaaccaat acctgaccga gaaaaaacgt
     1441 atcgaagctg aaaaagccga agcggagaaa gcagcggcaa atgttgaaat tatcgaacag
     1501 cagcctaaaa cggatacggg cgtgtttaag ccggagtgaa aaaagaaagg gtttcagacg
     1561 atatttgttc tacaaaaggt tgtttgaaac aattttaaag caagattgaa atggattaaa
     1621 aatgtcatct aaccaatata tccagtcgct tgagttgaca aactttaccg ttcttccaaa
     1681 cgatactttt gaattttctg aaaatctcaa tgttattgtt gccgaaaacg gttgtggcaa
     1741 aacacatttg ttaaaaattt tatacagcct gctagaagta acatctaaca ccaaaaacag
     1801 attactgaaa acagaattgc aaaaaagttt tgccgataaa ttactgaatg ttttccgtcc
     1861 cgattccttg ggcaggttga gcaaacgttt gcaggggcgc gggcgtacgg aaatcgtttt
     1921 aaaactgcaa aacggcacta cgcatagtag tctgaatttt tccagtaact catcatcgca
     1981 agtcaatgtt caaagcatcg gattgaaaga aaatgaatat actccgacac ctatcttctt
     2041 acccagccgc gaattaatta cactttgccc ttggttcact tctttgtatc aaaaccaaag
     2101 catccctttc gaagaaactt ggtttgatgc ctgtatgcaa ttaaatcacc cgcttgccaa
     2161 aggccccaga gaaacaaaaa ttcgagaatt gctcgaacct attgagaacg cgatgggcgg
     2221 aaaagtatct gaagaacaag gaaggtttta tctatcgctg acaaatacgg gcggtaagat
     2281 tgaagcacct ttggtagcag agggtttgcg gaaatttgtc atgattgccc ggttaatcgc
     2341 aacaggggca ttgctggata aaggctatct attttgggat gaaccggaag ctaatctgaa
     2401 tcctaaattg atcaaagtgg ctgcccgtat tatttggtct ttatctcaac agggtattca
     2461 ggtttttatt gcaacacact ctttattctt attgagagaa ttggaacttt tgaagcttga
     2521 aaataacacg gatttacctg tacgtttttt ctcgttgatt gcttccgatg atggaacaaa
     2581 agtggagcaa gggaacagta ttaatgattt gaacacattg atattgttag atgaaaacat
     2641 tatgcaggca gacaggtatc tgaatatttg aggttaagct atgactacaa tcacagaaaa
     2701 gagattaacc tttgcttttc ctgaagatta ttacgttacc aagtatgacg aatgggaaca
     2761 ttataaaatt tttcagaaca gttgtaattt acgtaataaa attgatacaa atgaaaaggg
     2821 aaagaacggg ataaatcaaa gtgtagatga cgataatggc agctcaggtg tagatataat
     2881 agcccttcat gagtcgacac tttggctaat cgaaattaaa gattattacc gacttgggct
     2941 tgagccaaat gcccaatcaa tagatgaaaa actttctgac ctaccatatt taatcgcaag
     3001 aaaaattcga gattcattgg caggattggt ttctgctaaa tttaaagcag caaaacagga
     3061 agaaaaagat ttttctcgct tggctttaga ttgtaacgaa ataaaaatag tccttcatat
     3121 tgaaatgcct agtataagaa gtaaacttta tccctcgtca tcagatttag caaacttatt
     3181 aaaagataag tttaaattat cagaatttac aaaaaatttt gcaaactgtt atgcagaacc
     3241 aattttcaca aatatcagcc atattaataa tccgcaactg cgtaatgttc cttggtccgt
     3301 atctacagga acagaacaga aattatcatc cgagcaacaa agattaatcc ataatcccat
     3361 gaccaccatc tacaacaccc ttacccgcca aaaagaaccc tttgccccca tcgaccctga
     3421 aaacgtgcgt atgtacgttt gcggcatgac tgtttacgat tattgccact taggccatgc
     3481 ccgtgtgatg gttgtgttcg acatgattgc ccgttggttg cgtgagtgcg gctatccgct
     3541 cacttatgta cgcaacatca ccgacatcga cgataaaatc attgcccgtg cggctgaaaa
     3601 cggcgagacc atcggcgagc tgactgcgcg tttcattcag gctatgcacg aagatgccga
     3661 tgctttgggt gtgttgcgtc ccgatatcga gccgaaggcg acggaaaaca ttccgcaaat
     3721 gattgccatg attgaaaccc tgattcaaaa cggcaaggca tatcctgccg caaatggcga
     3781 cgtttactac gccgtgcgtg agtttgccgc ttacggacaa ctgtcgggca aatcgttgga
     3841 cgacctgcgc gcgggcgaac gcgtggaagt ggacggtttc aaacgcgatc cgcttgattt
     3901 tgtattgtgg aaagcggcga aagcaggcga accggcgtgg gaaagcccgt ggggcaacgg
     3961 ccgtccgggt tggcacattg aatgctctgc catgagtgaa aacctgttcg gcgatacctt
     4021 cgacatccac ggcggcggcg cggatttgca attcccgcat catgaaaacg aaatcgccca
     4081 aagcgtcggt gccagcggtc atacctgcgg ccacgaccac gcacaaaccc accacggtca
     4141 aagcattgcc agccacgtca aatattggct gcacaacggc tttatccgcg tggacggcga
     4201 aaaaatgtcc aaatcgttgg gcaacttctt cactatccgc gaagtgttga aacaatacga
     4261 ccccgaagtc gtgcgcttct tcatcctgcg cgcccactac cgcagcccgt tgaactattc
     4321 cgacgcgcat ttggacgacg caaaaggcgc gttgacccgt ctatacacca ccttgaaaaa
     4381 tacgccaccc gccgatccga tgccgtctga agccgacgat gactacacgc gccgctttta
     4441 tgttgcgatg aatgatgatt ttgatacggt gaaagcggtg gcggtgttgt tcgaacttgc
     4501 cggcgaagtg aacaaaacca atgacgcgca actggcaggc tgcctgaaag ccttgggcgg
     4561 catcatcgga ctgctgcaac gcgacccgac cgagttcctg caaggcggcg cggcttcaga
     4621 cggcctctcc aacgaagaaa tcgaagactt gattgcccgg cggaaacagg cgcgctccga
     4681 taaaaactgg gcggaatccg accgcattcg cgaccttctg aacgaacaca aaatcatttt
     4741 ggaagacaac gccggcggca cgacttggcg gcgcggttga aatccatcga aaagggtaaa
     4801 tgtgccgcat tttgcccttt tttgttcaga cggcattttt attgtgagaa cttattttta
     4861 ttatgcttaa aatcatttcc gccaacgtca acggcatccg ctccgcctac aaaaaaggtt
     4921 tttacgaata tatcgccgca tcgggcgcgg acattgtctg cgtgcaggaa ctcaaagcgc
     4981 aggaggctga tttgtctgcc gatatgaaaa atccgcacgg gatgcacggc cattggcatt
     5041 gcgccgagaa gcgcggttac agcggcgtgg cggtgtacag caaacgcaaa cccgacaatg
     5101 tgcaaatcgg tatgggcatt gaagaattcg acagggaagg gcggtttgtg cgttgcgatt
     5161 tcgacaggtt gagcgttatt tcgctttact tgcccagcgg cagcagcgcg gaagaacgcc
     5221 agcaggtgaa ataccgtttc cttgatgcgt tttaccctat gctcgaagcg atgaaaaacg
     5281 aaggacgcga cattgtcgtt tgcggcgact ggaacatcgc ccaccaaaac atcgacctga
     5341 aaaactggaa aggcaatcag aaaaattcag gtttcctgcc ggaagaacgc gagtggatag
     5401 gcaaggttat ccacaagctc ggttggacgg atatgtggcg cacgctttat cccgatgtgc
     5461 cgggctacac gtggtggagc aaccgcgggc aggcgtatgc gaaagatgtc gggtggcgca
     5521 tcgattatca gatggttacg cccgaacttg ccgccaaagc cgtgtccgca cacgtttata
     5581 aagatgaaaa attttccgac catgcgccgc tggtcatgga gtatgactat gctgccgaat
     5641 aaagttttgg gtaaatatga ttggaatgtg gacggaaaaa caggaatagg cgcagcatgg
     5701 gttgtcgctg cgtttatcct gcccatattg gtgtgggcga tatttatgtt gtcgcggatg
     5761 caaggctggc ttgcgccgac caaggcaaac ccgacatggg cgttggtgtg gctgctgatc
     5821 tgcatgccct gcctgctgat tgcgtccaaa tgtttgggtt ggaaaggctg gcggcgggtg
     5881 gtgaatattt ttgcctgcct gaccgtctgc gccatattga gcgtacccgc ttcgctgctc
     5941 atcgccttta ccctccggga cctgctgaaa taggcggggc ggtatgcagg gttttgaact
     6001 cgaagatttg acgctttggc tgatacgcga tgccggagag gatcagatgt ggatagaccg
     6061 ttgggcgatc agttatcccg tcgtgcagat gtccgaagcg tcggccggtc aaagcatagg
     6121 ggaatggcag gcagggcttc ggacggcatt tgaacgcata cgtggcaaat acgtcgccgt
     6181 tgtcgcacac ggtgcgggcg cggccgcatt tttggcgtgg ctgtatcagg cagacatcct
     6241 gacacggaag aaaattgcca acatcatcct tgtaccgcag cgtcccgata tttttcccga
     6301 cgatgcggaa cacactttcc aacgcgtccg ctgtccctgc cgtgccgcat tggtggtgtc
     6361 cgaacacggg gatgtgccgc gagattgggc gcaaaaacag gcggatacgt ggaacgcgcg
     6421 cctgttggtt tccccgcatt cgggcagttt gaacggtatg ctcggcggct ggcagtgggg
     6481 tatgaagctg atgcaggaaa tgttgctggc gtgaacgctt gccttatcgg aatttcggct
     6541 gtagcaggaa gtccgcatat cgggctgttt tcattgacgt gcaggcgcat caggttcgga
     6601 taaagtcggg ctgccgcata ccgccggaaa tggaatcctt tattttttac gtcggcagtg
     6661 ccggcagggc gttatccggc agggttgcaa ggaaaatgcc gtctgaaaca ggcttcagac
     6721 ggcatttcca ttcaaacagg gcttacaggc tgcccaacac gatacgcaat acgcggcgca
     6781 gcggctcggc cgcgccccac aagagctggt cgccgacggt gaacgcgctg atgtattcgc
     6841 cgcccatgcc cagtttgcgg atgcgtccga cagggacgga cagcgtgccg gtaactttgg
     6901 caggagtcag ctcgtggatg ctggcttctt tttcattggg gatgactttc acccagtcat
     6961 tcgcgcctgc caaaatcgtt tcgatttcgg aaacaggcag gtcttttttc aacttcagag
     7021 tgatggcttg gctgtggcag cgcatcgcgc cgacgcggac gcacaggccg tcaatcacgg
     7081 ttggattgtc gctgcggccg aggattttgt tggtttccac gccgcctttc cattcttctt
     7141 tggactggcc gttgcccaaa tccacgtcaa tccacggaat caggctgccg gcgagcggta
     7201 cgccgaagtt ggctttcgga tagtcttcgc tgcgcaggaa atcggatact ttgcggtcga
     7261 tgtcgagaat cgagccggca ggatcggcaa gttcgtccgc cacttgggcg tgaaccgcgc
     7321 ccataccgct gatgagttcg cgcatgtttt tcgcacctgc gccggaagcg gcttggtagg
     7381 tcatgctggt tgcccattcg accaaatcgt tttggaacag gccgcccaaa gccatcagca
     7441 tcagggagac ggtgcagttg ccgccgatgt agtttttcac gccgtttttg aggccgttgt
     7501 cgataacgtt gcggttgaca gggtcgagga cgataatcgc gtcgtctttc atgcgcagag
     7561 aagatgccgc gtcaacccag tagccgttcc agccgctgtc gcgcagggct tggaagacgg
     7621 atttggtgta atcgccgcct tggcaggtaa cgatgatgtc cattttggcg agttcggcaa
     7681 cattgttggc atctaataat gttttagccg cctgaccgaa atcaggggct gcgccgccga
     7741 cgttggaagt ggtaaagaaa aacgcttcag gaatgtgggc gaagtcgttt tcttctttca
     7801 tacgctgcat caaaaccgaa ccgaccatac cgcgccagcc gacgaaacct actttcattg
     7861 tgttgctcct tgaggaaaaa tcgt
//
LOCUS       DAWEYF010000091         7860 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.091, whole genome shotgun sequence.
ACCESSION   DAWEYF010000091 DAWEYF010000000
VERSION     DAWEYF010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7860
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.091"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..1334)
                     /locus_tag="WGN93_001380"
     CDS             complement(<1..1334)
                     /locus_tag="WGN93_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HEZ0227283.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDATRLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSG"
     gene            complement(1396..2745)
                     /locus_tag="WGN93_001381"
     CDS             complement(1396..2745)
                     /locus_tag="WGN93_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ0227284.1"
                     /translation="MLNPSRKLVELVRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRFLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVATNREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKTNDRT"
     gene            2888..3514
                     /locus_tag="WGN93_001382"
     CDS             2888..3514
                     /locus_tag="WGN93_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ0227285.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYIVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(3578..4996)
                     /locus_tag="WGN93_001383"
     CDS             complement(3578..4996)
                     /locus_tag="WGN93_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ0227286.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            5323..6051
                     /locus_tag="WGN93_001384"
     CDS             5323..6051
                     /locus_tag="WGN93_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ0227287.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(6110..6598)
                     /locus_tag="WGN93_001385"
     CDS             complement(6110..6598)
                     /locus_tag="WGN93_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ0227288.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWPLFGWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(7356..7820)
                     /locus_tag="WGN93_001386"
     CDS             complement(7356..7820)
                     /locus_tag="WGN93_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ0227289.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPVASESRSYVVMEEVKENPVLDLD"
BASE COUNT         2023 a         2127 c         1980 g         1730 t
ORIGIN      
        1 cccgacaggc ggatttgaag tttctccaca tatccggcgc gttcggcgcg gctggtttcg
       61 gggcggtgcg tattgagcga cgaccatttc caatgactgc gggctttgtt gagttcgggc
      121 gggagtctgg tggcgtccca cggggctttg cggctgtgca gctcgatatc cgactgtgcc
      181 gcgtgtccgc gcgtttgcag gacgtggagc aaatcgaggg cgcgggcggc gagcagggtc
      241 agggtttcag ggtcggtgtg caaggtttgg cggccggaga gtttgtcgga aatggtgcgg
      301 gtattgggca ggatgccgcc caaaaagccg ccgattgccg tacccaatcc gagcgagccg
      361 ccgagtgtgg cgatgtccag ccccaagccg atgagtgcgc cggttgccgc gcccgtgccg
      421 gtgcggatgc cgtattgttt gagcaattcg ctgtcgaacg ggtcttggcg gaaggcttgc
      481 ggcatccagt cgccgccgtc gatttcgctg tggtagaaac ggtagagggc aaacagccgc
      541 tgctgcatct gccgttcgag ttggcgtatt tccgcctgca tggtttgcag cacggtggcg
      601 gtatcctcgt tttcgtccac ttcctgcctg aaggcggcgg catcgagcag gaaatcggcg
      661 atttcgcggc gcgcttcgcc gtccagccgc tgccattcgc gccggcgcat ggctgtcagg
      721 cggtcaagtg tgctgcgttc gggcaacatg gtggcgaggt tttcccacag gcgtagttcg
      781 ccttcaaaat caaaggcgac ggtgtcgaac cctgcgaaaa cgtgcaggtt tctcctcgcc
      841 agcatggttg tccacgattc gggaggctgt ccgccggtaa agttgaacac gggcataacc
      901 ggtttggcgc accatgaaag gataatcaat tcatcccgat atttgtcgag aacgggttcg
      961 cgcgcgtcga tgacgtacat tgccatatcg ctttgcaaga cttgccgtaa gactttggct
     1021 tcctgattga aatcatggtg cgcgccgtgg ctgccgagaa actgttgcag ccgttcgatg
     1081 ccgtctgaac gattgtccgt atggttttcc agccattcca gcacgccgcc cgcgtcttcg
     1141 agtccgggcg tgtcgtacag gaaaaccagc gtgtctgcgc cgtcgctgat ggcggcttct
     1201 tcgacatgac gcgtggtcga tggggcgttt ctgacttcgc cgaaaccgct gtcgcgcaaa
     1261 agggtacgca ggagcgaggt tttgccggtg ttggtgtgtc cgacgacggc gagggaaagg
     1321 ggttgtttgt tcatgatgtt tttgaagaat ggattttcag acgacctttt aaggatggcg
     1381 gctttatggg gcgtttcaag tgcggtcgtt ggttttcaga cggccttcct gcgccgctct
     1441 gtcgggttcc agccacgccg cgccgcattc ggccagcgcg ttacgccaat gttccagctt
     1501 ttccgaaagg tcgtctgaaa gcccctgttc cgccaaaagc tgcaccaccg cgccgccctg
     1561 cgccgcttcc gaaagtcgga cgatctgccg caacacgccg cggtcgggca cagtttgggc
     1621 gcgcacgccg ataagcagtt gcgccggttt ctgcttcagc tctgtctcca gcgcggcaac
     1681 ctgttcccga ttggtggcaa cgcccttatc cagccattcc tgcgccagcc tgccctcgaa
     1741 ccattcgccg tcctgccatt cggtctccag catgaccgcc catttcggcg catcgttcaa
     1801 gacgattttc ggcgaaacgg cggacacggt ttcccgacgc gtatccgcat cggtgatttt
     1861 gttctgccaa cggcggatga ccgcctgata atagggtttt tccaaatcca atccgttttc
     1921 gcttgttttc aaaaggattt tgcataccgc ccaagccaag aagcgcggca ggatgccgta
     1981 gcaggcgata ctgccgacca gcagccccga ccaagcccgc gcatcggcaa tattgccgtt
     2041 cagacgacct tcgatgaccg cccgcgcatc aggcacggga aaacccagtt tcgcaggcag
     2101 ccatgccaac atttccacca gccgtaccga agacgaatcg cccaacagcg tgctttccca
     2161 gttgaacgta tattgccgca ccaaaagcag cagcaatacc gacaccagca ttccgagcag
     2221 cgtgcagagc cacaggctgt gcgacgttgc gcctattttc caacgtaccg aaggttgccg
     2281 ccactcgtcc gcatacagcc gcaacaccgc ctgatttaca gggtctttgc cccgaaacca
     2341 cgtcgccgga ctgctgaaaa aacgccccac tttcacgcgc aggaacaaca ttgccaacca
     2401 tactgccagc atcagcgtat tcatgcccaa cacgcccgcc aaaaccaaaa agaaattcag
     2461 accctgattg tccattagaa gataagttcc tgaaaaaccg gtaaaaaacg caaacgtcgc
     2521 cgccgccacc cacaaccaga acgaccccgc acgcacacgt tccaacgtct cccgcagcat
     2581 acggttcctg tcgatcatct ccgcccgacg gatgattttt tcctccgtac tgccgtccac
     2641 gcggcgcaaa gcctccgtcg cctgtacggg atcgccgctg aaaataaaac cgccttcgtc
     2701 caaaatacgg accagctcaa ccagttttcg ggatggattc aacataaaat gccgtctgaa
     2761 aataaaaaac agattttaac acacgcattt tcaagaatat tcacagtgta ggcaaagagt
     2821 aaatcccaca cagaggcaaa agtatcggcg taaactgact gcctctactt tcccgaaaga
     2881 ttgtgcgatg tatacaggcg aacgcttcaa tacttacagc catttgagcg gtttgattct
     2941 ggcggcggca ggtttggcgc tgatgctgct gaaaaccata ggacacgggg acggctaccg
     3001 tatcttcagc gtatcggttt acggcatcag ccttcttctg ctctatttga gttcctcgct
     3061 gtaccacgga attgcagccg gaaaactgaa aagcattttg aaaaaaaccg accactgcat
     3121 gatttatgtg ctgattgccg gaagctacac accgtttgca ctggtttctt tgagaaacgg
     3181 gccgggctgg acggtatttt cactgtcctg gctgctggcg gctgcaggaa tcgcacaaga
     3241 actcaccatt ggacggaaaa gcgaaaaacg actgctgtct attgcgattt atatcgtaat
     3301 gggctggatg gtcttggcgg taatgaaatc cctgacagcc tcactcccgc cggcaggact
     3361 ggcttggctg gcggcaggcg gtatgctgta cagcgtcggc atttactggt ttgtaaacga
     3421 tgaaaaaatc cgacacgggc acggaatctg gcatctgttc gtattgggcg gcagcatcac
     3481 ccaatttgtc agcgtgtacg gttacgtaat ctgaatgccg tctgaaaagc aaaacctccc
     3541 gatcctgaag attgggaggt tttctgtttg ccggacatca gcccttgtcg tggaactcgt
     3601 ggaattcata ctgataggac aaatcccgac ccgctttttt ctgtgccaaa taatcatcat
     3661 aaatggcacg gatttcctta cgcaacaaaa acagggctat caagttcggg ataaccataa
     3721 agccgttgaa catatcggac aggctccaaa ccaaatcgac tttgccgagc gtacctaaaa
     3781 cgatggcaag cagaaccaat gcgcgataga tgcccaagtg tcttcccctg aaaagaaaac
     3841 ggatgttgga ctcgccgaaa taataccagc cgataatggt cgtcaaggcg aaaaaggtca
     3901 gacacacggc aagcaattgc gaaccgaagc ccggaaatgc cttgttaaag gcaaattgag
     3961 taaccgccgc gccctgttcg cccgaaaggt tggcatcggt cagcaggata atcaatgccg
     4021 tagccgtaca taccaaaatc gtatcgataa acacaccgac aaatgccgcc ataccttgct
     4081 gcacaggatg cttcacatcc gcagtcgcgt gggcgtgcgg ggtagaaccc atccccgctt
     4141 cgttggaaaa cagaccgcgc gccacgccga aacgtatcgc ttcgcgcata ccgatacccg
     4201 ccgcaccgcc caaaacggct tcaggattga aggcggcggt aaagatgtgg ttgaacatcg
     4261 gcacaatata gtcggaaaat tcaaacagga taacgacggc gcacaaaata taaacaaccg
     4321 ccataaacgg cacgacaaac tgggcaatat tggcaatacg gttcacgccg ccaatcacaa
     4381 ccatgcccgc aaggacggca agcacaatac cgactgccaa agaaggcaca tcaaatgcaa
     4441 tggtaacggc agaagcaatg gagtttgcct gtgtcgcatt accgataaag cccaatgcga
     4501 taatcaacgc aatggagaaa aagcccgaca ggaaacgcgc cgcgcccctg ccgattttcg
     4561 gagtcagacc gtgcgtaata taaaacgccg gcccaccgat gtatttgccg tggctgacga
     4621 cgcggtattt ctgcgccagc agtgcctccg caaaaatcgt ggacatcccc aaaacggcag
     4681 aaacccacat ccaaaaaatc gcgcccggcc cgcctgcggt gatggcggtc gccacgccgg
     4741 cgacgttgcc cgtaccgatt tgcgcagata tggcaaccgc caacgcctga aactgcgata
     4801 aagacttgtc gtctttatcg cctttggcaa acaagccgcc gaatacagat ttgaatcccg
     4861 cacccagctt ggtaatctgc ggcgcaccga gatacagcgt aaaaaacagg ccgataccca
     4921 aaagcgcgta aatcagcagg tagtcccaaa ggaaccgatt gactgtaccc accagaacag
     4981 acaatatatt ttccataaaa taaaccttat cttacaatta aaatgactgc cttccaaaag
     5041 acattccaat aaggaaacac ggcgagcaga ccgtatttgc cgcaacagat gccttaaatt
     5101 gtcaacaatc ggggagaagc tgcgccatca taccgtaaaa tatcgttaat taaaacattt
     5161 ctttattttt aagcggaaag cggaggaaat cgctttcaga cggcatcgac aacggcacgg
     5221 cataaaacag gatattttgg gtacttgcaa cttatgttaa aatgccgacc gtaaaaaatc
     5281 tgacaaaaac agattaatta tttgaaataa gaaaggaaat ttatggcagg ccatagcaag
     5341 tgggcgaata tccagcataa aaaagcccgt caggatgcca aacgcggcaa aatcttcacc
     5401 cgtttaatca aagaaatcac cgttgcggcg cgtatgggcg gcggcgatcc cggtgcaaat
     5461 ccgcgcctgc gcctggcttt ggaaaaagca gccgaaaaca atatgcccaa agacaatgtg
     5521 caacgcgcca tcgacaaagg cacgggcaac ttggaaggcg tggaatacat cgaattgcgc
     5581 tacgaaggct acggcatcgg cggcgcggct ttgatggtgg actgcctgac cgacaacaaa
     5641 acccgcaccg ttgcggacgt acgccacgcg tttaccaaaa acggcggcaa cttgggtacc
     5701 gacggctgcg tggcgttcaa cttcgtgcat cagggctatt tggtattcga acccggcgtt
     5761 gacgaagacg cgctgatgga agcggctttg gaagccggtg cggaagacgt ggttaccaac
     5821 gacgacggtt ccatcgaagt cattaccgcg ccaaacgatt gggcgggcgt aaaatccgct
     5881 ttggaggcgg caggttacaa atccgttgac ggcgacgtta cgatgcgcgc ccaaaacgaa
     5941 accgaactct ccggcgacga tgccgtcaaa atgcaaaaac tgattgacgc gctggaagac
     6001 ttggacgacg tgcaagacgt ttacacttcc gccgtattga atttggactg atacgcagca
     6061 cagcagacat acaataaaat gccgtctgaa cctttcagac ggcattgatt tatttagccc
     6121 ttgcccacgc ccaccaaacc gtcaggacaa ccgccagaaa atacgccgcg ctccaaacag
     6181 gcaaagcaac ccccagcaga taatccggtt cggcacaatt tccgaacccg cgcacgacag
     6241 gctcgaacca accaaacaaa ggccagccct tcaatcggaa cgtccacggc gcaccgcacg
     6301 aaggagccgt acccggcggc agcgactgca accacaactg atatgccgca acagaaatac
     6361 ccgtaacggc cgggatgctg ataaagacag caccgaacaa accgcccgcc cttcttcttg
     6421 gtctgcacat caggacaatt gccgtacaca atgcggttgc caaaacgcat aaccgctgac
     6481 tgatacacaa aacgcaaggc tccataccca aaacatactg tgccgccaaa gaaccggcaa
     6541 atgcacagac cgaaacggca aacagcagcc aaacggcttt tctaaataac ggggtcattt
     6601 tctcaacaca ccaatcaaaa taccgatatg ccgattttgc tggatatatc ccgagatggc
     6661 aagggacgaa tcgacaccgg ctcaggtgcg gacgatttcg gttttcccga tatacacaag
     6721 acctaacaag ggacaaaacg gcgatttgcc cgcacaatgc ccgcaaaaaa atacatctag
     6781 aggatttgaa tttcggcaaa tttagtgaat caaaagttta tttcaatgaa atcatatgat
     6841 ttttttgaat aagcggattg acaggttttt gaaggaattt gttaccggat agccatcggg
     6901 caagtttttt gcaaaatttg aatcggtcgg gtaaattttc aaaaaataat tgacagcgga
     6961 taagaaacgg cggataattc ccgccgtcga gttgcttgat gcagcttgat ttttctcctc
     7021 tatttctcct ttgtagactt ggcacacatt caaccggatg tgtgcatttt tttatctccg
     7081 ctttttttga aatttaatta cttttattgt ttgaaattcc attctttaag aaatttaaca
     7141 agaaaaacgc ttgctttttg accggaaaag ctgcataatt cgttccgtta gctggttcga
     7201 gtagtcagtt aatagtttct cctctatttc tcctttgtag acttggcaca cattctattg
     7261 aatgtgtgca tttttttatc tgaagcaaca agcctctgtg cgtgatgttg ttatgtttca
     7321 tttaggtgtc aaaccgcata gccagcctga aatattcaat ccaaatccaa aaccggattt
     7381 tctttgacct cctccatcac aacataactc ctactctccg aagcgacagg cagttgcaat
     7441 aggatattgc ctagcatatc ccgataggca gacatatcgg gcaaacgtac tttaatcagg
     7501 tagtcgtatt cgcccgacac caagtggcat tccataattt gcggaatttt cagcacttct
     7561 tttttgaaat cttcgaaaat attgcccgat ttggattgca gcttcagctc gacaaaaacc
     7621 aatagcggtt tgcccaacag atggggattg aggtgggcgt gatagccgga aatataatgt
     7681 tcccgctcca aacggcgcac cctctctgta acgggcgtgg tggacaagcc taccttctcg
     7741 gcaagctccg tcatcgggat gcgggcattc tgttggagga tcttaagaat gcggaaatcg
     7801 attttatcta gttctttcat ttggattgcc ttgtatttat tattgatttt aacaaataga
//
LOCUS       DAWEYF010000092         7846 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.092, whole genome shotgun sequence.
ACCESSION   DAWEYF010000092 DAWEYF010000000
VERSION     DAWEYF010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7846
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.092"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(90..1886)
                     /locus_tag="WGN93_001387"
     CDS             complement(90..1886)
                     /locus_tag="WGN93_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ0227290.1"
                     /translation="MNTVSNYLSALREAMRAQGLDALVIPSADPHLSEYLPAHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIEHPNDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVAGKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLIDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2344..3597
                     /locus_tag="WGN93_001388"
     CDS             2344..3597
                     /locus_tag="WGN93_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ0227291.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3603..3755
                     /locus_tag="WGN93_001389"
     CDS             3603..3755
                     /locus_tag="WGN93_001389"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227292.1"
                     /translation="MPSETANRFQTALPRLWKKMPTSRKIRANFVIRSGRLKQIAPDL
                     FFRKTL"
     gene            3752..5263
                     /gene="lysS"
                     /locus_tag="WGN93_001390"
     CDS             3752..5263
                     /gene="lysS"
                     /locus_tag="WGN93_001390"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ0227293.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNQGELTVRVSGIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFERLTILDAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5340..5528)
                     /locus_tag="WGN93_001391"
     CDS             complement(5340..5528)
                     /locus_tag="WGN93_001391"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEZ0227294.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPEISRMLSSILAGYAWDTENPFVAK
                     SEQRLTALSEWVGQLESE"
     gene            complement(5532..6409)
                     /locus_tag="WGN93_001392"
                     /pseudo
     CDS             complement(5532..6409)
                     /locus_tag="WGN93_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
     gene            complement(6439..7566)
                     /locus_tag="WGN93_001393"
     CDS             complement(6439..7566)
                     /locus_tag="WGN93_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ0227295.1"
                     /translation="MSNWKPNIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1700 a         1993 c         2208 g         1945 t
ORIGIN      
        1 cttgcggcaa gatgaaaacg gtgcgggatg ttttgggaaa ccaatgccgt ctgaagggct
       61 ttcagacggc attttttgcg ccgtgctgtt taacgcgcca gcggttcggt gcgtttgatc
      121 agccacgctt ttgccgcgcc ttcggtcagc ggctcgaggc ggcggcggac ttcggcgtgg
      181 tagcggttga cccagtcgat ttcgccgtcg gtcatgaggg cggtgtctat caggcgggtg
      241 tcgatggggc agagggtcag ggtttcaaaa cagaggaagc tgccgaattc ggtttcttga
      301 ggggcggcga cggcttggtt ggcggcaagg ttttcaatgc ggatgcccca ttttcccggg
      361 cggtagagtc cgggttcgat ggaggtaacc atgccttttt tcatggcggt ttcgggcgtg
      421 gcgggggcgg cgaaggcgat gcgctgcggg ccttcgtgga cgttgaggaa atagcctacg
      481 ccgtgtccgg tgccgtggcc gtagtcgcat tgcgcctgcc acaggggttt gcggcaaatc
      541 gcatcaatca gcggcgaggg gatgttttct gggaacacgg cttcggcaag cgcgatatgg
      601 gctttgagaa cgagggtgtt gtcgcgtttt tgttcggcgg tgggtgtgcc gacagggacg
      661 acgcgggtga tgtcggtcgt gccgcctttg tattgcgcgc cggagtcgat gagcagcagc
      721 ccgttgccgc tgatggtgct gtggctttcg ggcgttgcgc tgtaatgcgg cagggcgccg
      781 ttggcgttga agcctgcgat ggtgtcgaaa ctcaatgaca caaaacccgg gcgcacgctg
      841 cggtggcggt aaagcatggt gtccacgtcg atttcggtca ggctgccgcc gttgccgatg
      901 atgtcttcaa actcggcgaa gaaaccgcac aacgccgcgc cgtcgtgttc catcgcttcg
      961 cggatgcggg cgatgtcggc ttcggatttg caggatttga acagcgtgga cgggttgatt
     1021 ccctcgataa ggcgcacgct ttcgggcagg cgcacaagcg tgctgacggc ggttttgttc
     1081 ggttcgataa gcaacgcgcc gccgatttgc gcgagtttgc cggcaacttg ggcgtaaggc
     1141 tcgaccgtga tgcctgcggt ttgcagcgcg gcggcggctt cggcgttcag acggcatcgg
     1201 tcggtaaaca ggacggcgtt gtctttgcca atcagcagga aggacacgaa aacgggattg
     1261 aaaggcacgt cgctgccgcg caggttggtc agccaggcga tgtcgtcaag cgaggaaacc
     1321 aagtggtaat ccgcgccttt ttccgccatc acggcgcgca cgcgggcgag tttttcggcg
     1381 gcggtttcgg agacgtaggc ggggtcgtgg atgaacacgg tttcggcagg aatggccggg
     1441 cggcttgtcc acacttggtc aagcagatcg tttgggtgtt cgatgcggat atttttggcg
     1501 gcgagtgatt gcgccaaagt gcgtttgccg gtgagcgaga ccatatcgga agggatgccg
     1561 acggcggcgt tttcgggcag gtttgccgcg agccattcgt tgtacggcgg cacttgaccg
     1621 cttttttgca gctcgatgcc gctgccggaa agctgtttgg cggcttgttc ccaatagcgg
     1681 ctgtccaccc atacacccgc ttcatcggtg gtcaggacaa atgtgccgac cgagccggta
     1741 aagcccgaca attcgcggcg cgcctgccag tgtgcgggca ggtattcgga caggtggggg
     1801 tcggcggaag ggatgacgag tgcgtccaag ccttgcgccc tcatggcttc gcgcaatgcg
     1861 gacaggtaat tcgatacggt attcataaca gttcctccaa tcgggttttg cggcttcaga
     1921 cggcatggac ggaaatctga aatgccgtct gaaaaacata accatcttat caaatcgcca
     1981 gcctgctgca aaacggacgg gctgatcgga tggtgcgtgt ttgcgcgaaa aaagcgatgt
     2041 aaggttgttt gttgtaaaat tttaggcata aaatgtcgtt tcatgccttt ttttggaagt
     2101 aatatggaaa atatagtcaa gtttgagcat gaagttctaa tagtgtgtgt tggcaggtat
     2161 ttggattacg ttacaatacg cgctttcatc aaaatttccc taccgagcgg tatcctgttt
     2221 ttgaagacgg taggatttgg gtttgtttgg gggcaatccc gcccaaattg gagcaataga
     2281 tagggctgtg tccgaatatg cggctctgtg tgttgaaaca cggttaaaaa tacggaagac
     2341 tttatgtccg aacaacatat ttcgacttgg aaaagtaaaa tcaacgcatt gggaccgggg
     2401 attatgatgg cttcggcggc ggtcggcggt tcgcacctga ttgcctcgac gcaggcgggc
     2461 gcgctttacg gctggcagat cgcgctcatc atcatcctga ccaacctctt caaatacccg
     2521 tttttccgct tcagcgcgca ttacacgctg gacacgggca agagcctgat tgaaggttat
     2581 gccgagaaaa gccgcgttta tttgtgggta ttcctgattt tgtgcatcct ctccgccacg
     2641 attaacgcgg gcgcggtcgc cattgtaacc gccgccatcg tcaaaatggc gattccctcg
     2701 ctgatgtttg atgccggcac ggttgccgcc ttgattatgg catcctgcct gattattttg
     2761 gtgagcggac gttaccgcgc tttggatcgc gtttccaaaa tcatcatcgt tactttgagt
     2821 atcgccacgc ttgccgccgc cggcatcgct atgtcgcgcg gtatgcagat gcagcccgat
     2881 tttatcgagc cgacaccgtg gacgcttgcc ggtttgggct tcctgatcgc gctgatgggc
     2941 tggatgcccg cgccgattga aatttccgcc atcaattctt tgtgggtaac cgaaaaacaa
     3001 cgcatcaatc cttccgaata ccgcgacggg atttttgatt tcaacgtcgg ttatatcgcc
     3061 agtgcggttt tggctttggt tttccttgca ctgggtgcgt ttgtgcaata cggcaacggc
     3121 gaagcagtac agatggcggg cggcaaatat atcgggcaat tgatcaatat gtacgccgtt
     3181 accatcggcg gctggtcgcg cccgctggtg gcgtttatcg cgtttgcctg tatgtacggc
     3241 acgacgatta ccgtcgtgga cggctatgcc cgtgccattg ccgaacccgt gcgcctgctg
     3301 cgcggaaaag acaaaacggg caacgccgaa ttctttgcct ggaatatttg ggtggcgggc
     3361 agcggtttgg cggtgatttt ttggtttgac ggcgtaatgg cgaatctgct caaatttgcg
     3421 atgattgccg cttttgtgtc cgctcctgtg tttgcctggc tgaattaccg tttggtcaaa
     3481 ggtgatgaaa aacacaaact cacatcaggt atgaatgccc ttgcattggc aggcttgatt
     3541 tatctgaccg gttttaccgt tttgttctta ttgaatttgg cgggaatgtt caaatgataa
     3601 cgatgccgtc tgaaaccgca aaccgctttc agacggcatt gccgcgttta tggaaaaaaa
     3661 tgccgacatc gcgtaaaata cgcgcaaatt ttgtgattcg gtcaggtcgt ctgaaacaga
     3721 ttgcgcctga tttatttttt cggaaaaccc tatgagcgaa caaaaccatc cgcaaaccga
     3781 gccgcagttg gacgaaaacc aaatcatcgc cctgcgccgc gaaaaactgc acaacatccg
     3841 ccaacagcgc aacgcctatc ccaacgactt caaacgcgac agcttcgccg ccgatttgca
     3901 cgcccaatac ggcgaaatcg gcaaagaaga actcgatccg caaggcattc ccgtcaaagt
     3961 ggccggccgc atgatgctga agcgtcaaat gggcaaggcg agctttgcca ctattcaaga
     4021 cgtgtccggg caaatccagc tttatctgaa caacaaaggc gtgagccaag aagttttgga
     4081 cgacttcaac cattgggatt tgggcgacat cgtcggcgcg gaaggcactt tgttcaaaac
     4141 caaccagggc gaactgaccg tacgcgtgtc cggcatccgc ctgctgtcca aatccctgcg
     4201 ccctctgccg gacaaacata aaggcttgag cgatcaggaa accaaatacc gccaacgcta
     4261 tgtcgatttg attgccaacg aagaatcgcg caataccttt atcaaacgca gccaaatcat
     4321 ccaatccgtg cgtaatttta tggtgggcga gcattatctc gaagtcgaaa ccccgatgat
     4381 gcacccgatt cccggcggcg cgacggcaaa acccttcgtt acccaccaca atgccttgga
     4441 cattccgctc tacctgcgca tcgcccccga gctgtatctg aaacgcttgg ttgtcggcgg
     4501 tttggaacgc gtgtttgaaa tcaaccgcag cttccgcaac gaaggtatgt ctgtgcgcca
     4561 taaccctgaa ttcaccatga tcgaattcta cgaagccttc tccgactacg aacgcatgat
     4621 gcaaatggcg gaagacatca tccgcaacgc ttcccgcgcg gtaaacggca cggcaaacat
     4681 cacttacaac ggcaaagaag tcgatttgga aagcccgttc gagcgtctga ccattctcga
     4741 tgccatcaaa aaatacaatc cgcactacac cgacgagcag ttgaacgatg cggagtggct
     4801 gaaaaaagaa atcgtcaaac acggcgaaag cctgcctccg tctccgggca tcggcagcct
     4861 gcaacttgcc ctgtttgaag gttgcgccga gggcaaattg tggaacccga ctttcattat
     4921 cgactaccct gtcgaagtgt ccccgttggc acgcgcatcc gacagcaaac cgggcttgac
     4981 cgaacgcttc gagcttttcg ttgtcggccg cgaactggca aacggctact ccgagttgaa
     5041 cgatccggaa gaccaagccg aacgcttcaa ggcacaagtg gcgcaaaaag acgcgggcga
     5101 cgacgaagcg atgcactacg atgccgacta catccgcgcg atggaattcg gcctgccgcc
     5161 gaccggcggc tgcggcatcg gcatcgaccg cttggtcatg ttgctgaccg attcgcaaac
     5221 catccgcgac gtgattctgt ttccgcagat gcgccccgag tagtcataaa aacagttgaa
     5281 atggcaatgc cgtctgaacc cgattggatt cagacggcat tttgtatggc ggtacggatt
     5341 tattcgcttt ctaactgacc gacccattcg gacaaggcag tcaggcgttg ttcggatttc
     5401 gccacgaacg ggttttcggt atcccacgcg tagcctgcca aaatcgaaga aagcatacgg
     5461 ctgatttccg ggctgcggtc gggcgcgtac acgacgtttt ggaagcggaa atcgtaccaa
     5521 ccgtccacac atcaggggtg gtaatccgaa tcaacacgcc ttcttgcctg tgcggcggac
     5581 ataaaccgtt ttttgactcc agcaccacac ctaaaatcgt gctgccttcg ggcaggtcaa
     5641 aggcttcaga cggcctgccc gtctgataaa tcagcatcct gcccgcaata tcgataacaa
     5701 ggtgcgcgac gaccagccgc ttgtcggaca gttcaatcag cacgatgtcc tcgtccgcag
     5761 ggcgcatacg cggctcgacc accaccaaat cccctttttc gataaccggc gacatggacg
     5821 tgtcgggcat ggcaacggca aacgtgtact gcgagggggc gaccaccgaa gcaaacaagt
     5881 cgaaactgcc tgtgagtttg cctgtacggg cgaaagccgc cgcctgacgg tctgacaaca
     5941 gggggcgtgg tgtgagcctc atcgacagtg ctttgccgtc ggcatcgctg tggttgtgcg
     6001 tatgcgtatg atggttgttg atggtcgtat cgccttggac atcgttaagg actatgctgt
     6061 ttgaacctgc cacggatttg gtcatctcat tgtaggcttg cgtcgtgatg cgctcttgct
     6121 tggtcatacc tgttacagcc tgtttcagca tttctaacgc tatgtgattc ttcctaaggg
     6181 tcgctatacc ggcttttgca gcttgctcat taccacaaga ggggcaaccc cagctacttc
     6241 ctatgaacat attggagtac ctcgaacagg tttggtttcc atgtttaggg cagttgatta
     6301 cacacggctt ggctgtaccc tcaaactcga ccaacttaat gccacgatga ccgaaacgtt
     6361 cctcaacctc agcagcagct tcttcaaatg tttttgacct tcttgccata ttgacctccg
     6421 gattattgat tattttggct atgctttaac gagggattgg aatgaggtaa agctgttgcc
     6481 ctctccccgc aatagttcca ttaggcgcgg atgaatgaat agtttgtccc tgccgatggc
     6541 gatttcttgc agcacaccta tgtctgaaag ctctttcagg tacttagagg ccgtctgccg
     6601 tttggctatc cctgccgctt ctaggttggc aatgcgtgta tatggctgct caaacagaag
     6661 atttaccagt tcgtgcgtgt agattccttg tgcgtgtgtc cgtatgtgtt gacgtgtctg
     6721 ctcaaacagg cggcgtatcg catctatttt cgctaccgtc caatcggcgg tgtcggctac
     6781 gccgtctaag atgtagatta tccagctttc ccagtcctgc cgttcggtta cgcctaaaag
     6841 caggcggtaa tagtccgccc tgttttcgat aatatagcgg ctcaaataca aaataggcaa
     6901 atccaaaagc cctttttcaa tcaatagcag gctgttcaat atgcgccccg tccgcccgtt
     6961 gccgtccgta aacggatgga tggcttcaaa ttggtaatgt gccgccgcca tgatgataag
     7021 cgggtctaaa tcgccgcttt cgtgaataaa ccgctcccaa tttgccagct tgccgcgtat
     7081 ggtttcttct ccttcgggcg gggtatagac aacatttccg ctgttgcctc cttttagggc
     7141 tgtgccgcct gttttgcgga tggccatttc gtaggggtgc ttgatggcgt tgcagaccat
     7201 gatggcggtt tgtgtgcata aagggcggct cgtcagtgat tcatagcctg caaacagggc
     7261 ggtgcggtat tgcagggctt ctttcgtggc agggtcttgc cgttccgtat ccatttgcag
     7321 ggattgaaac agcttgtccg tggtggttac gatgttttca atttccgaac ttgcacgggc
     7381 ttccataaca ggaagggtgt taatcagcat ggcttgattc ggtatcaatt ctgccgcctg
     7441 ctttaaacgg gcaagggatg cacgggcggc tatacaacgt ttcaggatgg ttttgctttc
     7501 aatatcctgt tttggcggca ggggtggtaa atcgttatag ggaatattgg gtttccagtt
     7561 gctcatattt aaaatttcgg aaaatttaaa gatgtttcca gtatatgttt acgccgtgta
     7621 tatatcaagg atatatgttt aaaaatttgg cttttgtaaa tatatgggcg gtaaaaccgc
     7681 attattttat gttgttacct attttacacc ttgtctgcac acgatttcca aacaacctaa
     7741 aaagaaacct gccgaaaggc aggtttaaag aggtcatttt aaatgtgaac taaagcttac
     7801 accctcgtag ggtatcgtgt atatcagacg tacttaatat acacta
//
LOCUS       DAWEYF010000093         7643 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.093, whole genome shotgun sequence.
ACCESSION   DAWEYF010000093 DAWEYF010000000
VERSION     DAWEYF010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7643
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.093"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(9..425)
                     /gene="dksA"
                     /locus_tag="WGN93_001394"
     CDS             complement(9..425)
                     /gene="dksA"
                     /locus_tag="WGN93_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ0227296.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(572..1363)
                     /locus_tag="WGN93_001395"
     CDS             complement(572..1363)
                     /locus_tag="WGN93_001395"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ0227297.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLQKEL
                     GVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVDTLSRYLGG
                     TRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1412..1819)
                     /locus_tag="WGN93_001396"
     CDS             complement(1412..1819)
                     /locus_tag="WGN93_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ0227298.1"
                     /translation="MGMRTIKYLAMALLLMFTVAGCQLAGWYPCPSLSGWCMPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSECVRW"
     gene            complement(1801..2505)
                     /locus_tag="WGN93_001397"
     CDS             complement(1801..2505)
                     /locus_tag="WGN93_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ0227299.1"
                     /translation="MTVLQQRYREVSDRIGKLVLQAGREPHSVRLIAVSKTFPSDGIR
                     KVYAAGQRDFGENYIQEWYGKTEELADLPDIVWHVIGDVQSNKTKFVAERAHWVHTIC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAAKHGVAPEEAVVLAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSDDMPAAIACGATHVR
                     IGSAIFGKRSRLECVQ"
     gene            2624..3667
                     /locus_tag="WGN93_001398"
     CDS             2624..3667
                     /locus_tag="WGN93_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ0227300.1"
                     /translation="MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPRIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTRDGNG
                     RVASHEILISNPAVRNLIRENKIAQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARKRAQNSESMSF"
     gene            3831..5057
                     /locus_tag="WGN93_001399"
     CDS             3831..5057
                     /locus_tag="WGN93_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ0227301.1"
                     /translation="MSTNNLHDILDEMVQVYSQKKQSRSETPAEIGAHLHPLLDRLCE
                     TAEAQSASDILISKGFPPSLKINGALTPQPQKALTGEETAAITASTMNAEQSEIFQRD
                     GEINYSVQSRSGTRYRANAYHSQGHAGLVLRRINHIIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPGHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRENMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHKQILIDIALNLSGIVCQRLALKKDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNINKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5343..7493
                     /gene="yccS"
                     /locus_tag="WGN93_001400"
     CDS             5343..7493
                     /gene="yccS"
                     /locus_tag="WGN93_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ0227302.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1895 a         2535 c         1655 g         1558 t
ORIGIN      
        1 tgccgccatc agtcggcaaa ctgttttttc atcctctctc ggcgttcttg ggactcaaca
       61 gataaagtgg ctgtcgggcg tgccagcagc cgcttcagac cgataggctc tcccgtatcg
      121 gcacagaatc cataatcccc ttcatcaata ttgcggatgg tcgcctgtat tttactgaga
      181 agttttcgtt cccgatcgcg ggtacggagt tccaatgcgt actcttcttc ctgtgtggca
      241 cggtcggcag gatcgggggc tgattcgtgt tcttggagat gccctgtcgt agcggaagca
      301 ttttcgatga gttcgtcttg catttttacc agcaattcgc ggaaaaaagc caaatgctcg
      361 tcattcatat aatcgtcttc cggcccgttc caattcaaaa tatcttgttc tgtcagcttt
      421 gccataatgt atatcctctc ggttcaccga aaaaaacaaa gcaccacaaa gtggctttat
      481 tcctttgatt tttataaggc ttattgccta gggcgttttt gaaaacgcgc atcataacac
      541 gttttggatt ggttttttta ttttctttac attattgata ttgccgttcc atttcctgcg
      601 aacggcgcac acaggcacaa acgccctcgc ttatggcttc ggcgacacga tgccgcctga
      661 aagcttccac ggcttcgtgg gttgtcccgc cttttgacgt tacatttttt tgaagcttct
      721 cgaaatcttc acccgtctgc tcggcaaggg caaccgctcc tttaaacgtt gccagactga
      781 gcgcgcgtgc ttctgccata tcaaaccctt gtcggatggc agcattttgc aatgcgtcca
      841 gcagataaaa cacataagcc ggtccgctgc cgctgatacc ggtaatgctg tgcatttgcg
      901 cttcatcttc caaccaaacg gtcaaaccga ctgatttcat gattcgatcg gcaatcctgc
      961 ggtctgtttc cgatacttcc gcttcggcaa acataccgga tacgcccagc ccgatttttc
     1021 cgggtgtatt cggcataacc cggacaatgc ggcgtgttcc cccgaggtaa cggctgagcg
     1081 tatcaaccga caatccagct gcaacagaaa gcaccaatgc gccgttggtg cggatatttt
     1141 tgcacgcggc ttccatatcc tgcggcttga cggcaaggat taaaacatcg tcggaatgaa
     1201 gctccggcaa ggtttcagaa gtttcgaccc ccaactcttt ttgcaaacgt tcgcgctttt
     1261 ccgcaccccg gttggcaata tggatgcggt aaccgccttg tttgaccaat ccgcccgcaa
     1321 cggcagccgc catattgccg ccgccgagaa aataaacatt cattatttct accctattca
     1381 aaattacctt actaaattca ttcccaattt tttaccatcg gacacactcg gacagaccgt
     1441 tgcgccgcaa cccctgcttt ttcaaacaat caaaaccttc ctgtttgaac gtctcaatca
     1501 aaggtttgcc gtcacgcgta cgccaatcca acccgcaggc ttcaaacttc cctattttcc
     1561 tgtaaaagta agattgttgt gcggattcat attcgtttgc cctaacggaa cgattgccgt
     1621 ctgaaagcgg tatctcgtag tcctctaaag acggcggact ctcgccgcca atatcccaaa
     1681 aatcgatggc agccggtttt ctcggcatac accagccgga caacgacgga catggatacc
     1741 aacccgccaa ctgacagccg gcaaccgtaa acataagcaa taacgccatt gcaagatatt
     1801 ttattgtacg cattccaatc tgctcctttt cccgaaaatc gcactgccga tacggacatg
     1861 tgttgcaccg cacgcaatgg cggcaggcat atcgtccgac atccccatag acagcacatc
     1921 cgccttaacg ccagccgtat tgaggtcggc aagcagtttc cgcatcgttt gaaattgcac
     1981 cttcaactcc gtttcactgc tgttggcttt ggcaacacac atcagtccgc gtacgacgat
     2041 attcggcaac ttcgccactt cgaccgcaag cacgaccgct tcttcgggcg cgacaccgtg
     2101 tttcgccgcc tcgcccgcaa tgttcacctc gatacacacc tgcaaaggcg gcattgagga
     2161 aggacgttgc ccgctcagcc ggacagcggt tttcagacgg catatggtat gcacccaatg
     2221 cgcgcgttcg gcgacaaact tggttttgtt ggactgcaca tcgccgatga cgtgccacac
     2281 gatgtcgggc aaatccgcca actcttccgt tttaccgtac cactcctgaa tatagttctc
     2341 gccgaaatca cgctgtccgg cagcataaac tttgcggatg ccgtctgaag ggaaagtctt
     2401 actgacggca atcagtctga cagaatgcgg ctcccttccc gcctgcagaa ccaattttcc
     2461 gatacggtcg gacacctccc gataacgctg ttgcaacacc gtcatagatt atcccctatt
     2521 aaaaatgatt aaacagttga aacccctcca gtcagggcgg tacaatcaag gttgttagaa
     2581 tcattccaac caatcgaaac attatactaa acagagccgc attatgcaga ttaccgactt
     2641 actcgccttc ggcgttaaaa acaaagcatc cgaccttcac ctgagttcgg gcatatcccc
     2701 tatgattcgg gttcacggcg atatgcggcg catcaacctt cccgaaatga gcgcggaaga
     2761 ggtcggcaat atggttacct ccgttatgaa cgaccaccag cggaaaatct accagcaaaa
     2821 cttggaagtc gacttctcgt tcgaactgcc caatgtcgcc cgattccgcg tcaacgcctt
     2881 caacaccggc cgcggccccg ccgccgtatt ccgcaccatt cccagcaccg tcttatcgct
     2941 ggaagaattg aaagccccgc gcattttcca aaaaatcgca gaatcgccgc gcggtatggt
     3001 attggttacc ggccccaccg gttcgggcaa atccaccacg cttgccgcga tgatcaacta
     3061 cattaacgaa acccagccgg cacacatcct gaccatcgaa gacccgatcg aattcgtcca
     3121 ccaaagcaaa aaatccctga ttaaccaacg cgagctgcac cagcacactc tcagcttcgc
     3181 caacgcgctg agttccgcat tgcgcgaaga ccccgacgtt atccttgtcg gcgagatgcg
     3241 cgaccctgaa accatcggct tggcactgac cgccgctgaa accggacact tggttttcgg
     3301 cacgctgcac acgaccggcg cggcaaaaac cgtcgaccgt atcgtggacg tattcccggc
     3361 gggggaaaag gaaatggtgc gctctatgct gtccgaatca ctgaccgccg tcatttccca
     3421 aaacttgctg aaaacgcgcg acggcaatgg ccgtgtcgcc tcgcacgaaa tcctgatttc
     3481 caaccccgcc gtccgcaacc tcatccgcga aaacaaaatc gcgcagatta actccgtcct
     3541 gcaaaccggg caggcgagcg gtatgcagac gatggaccaa tcgctgcaat cactggtgcg
     3601 ccaagggctg attgcaccgg aagtcgcacg caaacgcgcg caaaacagcg aaagtatgag
     3661 tttctgatac acaaccgcct tccggccata ccggcgggaa aacaaggtgc aaacacgccg
     3721 ggcgggacgc gacatccagc ccagcatacc cttccgaata ggaagcgtcc gccttcctgt
     3781 tgaaacctgc cgccgcaaac tgcaaggctt aaactgaaaa gaagttaacg atgagtacca
     3841 ataacctgca cgacatcttg gacgaaatgg ttcaagtgta ttctcaaaaa aaacaaagcc
     3901 gatccgaaac cccggccgaa atcggcgcgc acctccaccc gctgctcgac cgcctgtgcg
     3961 aaaccgcaga agcgcaaagc gcgtccgaca tccttatcag caaaggattc ccgccctcgt
     4021 tgaaaatcaa cggcgcatta accccgcagc cgcaaaaggc tctgacgggc gaggaaaccg
     4081 ccgccatcac cgcatcgacg atgaacgccg aacaatcgga aatattccag cgcgacggcg
     4141 aaatcaacta ctccgtccaa tcgcgcagcg gcacgcgcta ccgcgccaac gcctaccaca
     4201 gccaaggcca cgcaggtttg gttttgcggc gcatcaacca catcatcccg caaatgcagg
     4261 aattgggcct gcccgaaaaa ctcaaagacc tcgccgtcgc gccgcgcggg ctgttgatta
     4321 tcgtcggacc taccggttcg ggcaaatcca ccacgatggc gactatgctc gaacatcgca
     4381 acaaaaccct gcccggccat atcgttacca tcgaagaccc gatagagttt atctacaaac
     4441 cgcgccgctg catctttacc cagcgcgaaa tcggcgtcga caccataaac tggcagacgg
     4501 cggtacaaaa cgctatgcgc cagtcccccg acgtggtctg catcggcgaa gtccgcagca
     4561 gggaaaatat ggaatacgcg atgcagctcg cccaaaccgg ccacctgtgc atttttacgc
     4621 tccacgccaa caccgcgccg cagtcgctcg aacgcatact caacttctac cccaaagaac
     4681 agcacaaaca aatactgatc gacatcgccc tcaacctgtc cggtatcgtc tgccaacgcc
     4741 tcgccctcaa aaaagacaaa acgggcagga cggcggttgt cgatttgctc atcaacacgc
     4801 ccgccatcca agacttcatc ctgaagggcg acctgatgaa catcaataaa atcatggaaa
     4861 ccgccaaaac cgacggaatg cagacgatgg accaaaacct tttcgagctg taccgtcacg
     4921 gcatcatcag ttacgaagaa gccctgcgcc agtccgtttc cgccaacaac ctgcgattgc
     4981 acatccaact gcacaaagaa ggcaaaacgc ccgaactcct ttacgacagg gtcaacggtc
     5041 tcaacctcat ttcctgatcc gcaaaaccca atgccgtctg aaaaccgcat ccccgttttc
     5101 agacggcatg attttatccg ccccattcat gtgctacact ttatagtgga ttaaatttat
     5161 agtggattaa caaaaatcag gacaagacga cgaagccgca gacagcacaa atagtacgga
     5221 accgattcac ttggtgcttg agcaccttag agaatcgttc tctttcagct aaggcgaggc
     5281 aacgccgtac tggtttttgt taatccacta tattcacttc ataacaataa accggtaaaa
     5341 ccatgaaaac cccactcctc aagcctctgc tcattacctc gcttcccgtt ttcgccagtg
     5401 tttttaccgc cgcctccatc gtctggcagc taggcgaacc caagctcgcc atgcccttcg
     5461 tactcggcat catcgccggc ggccttgtcg atttggacaa ccgcctgacc ggacggctga
     5521 aaaacatcat cgccaccgtc gccctgttta ccctctcctc gctcacggca caaagtaccc
     5581 tcggcacagg gctgcccttc atcctcgcca tgaccctgat gaccttcggc tttaccattt
     5641 taggcgcggt cgggctgaaa taccgcacct tcgccttcgg cgcactcgcc gtcgccacct
     5701 acaccacact tacctacacc cccgaaacct actggctgac caaccccttc atgattttat
     5761 gcggcaccgt actgtacagc accgccatca tcctgttcca aatcatcctg ccccaccgcc
     5821 ccgtccaaga aagcgtcgcc aacgcctacg acgcactcgg cggctacctc gaagccaaag
     5881 ccgacttctt cgaccccgat gaggcagcct ggataggcaa ccgccacatc gacctcgcca
     5941 tgagcaacac cggcgtcatc accgccttca accaatgccg ttccgccctg ttttaccgcc
     6001 ttcgcggcaa acaccgccac ccgcgcaccg ccaaaatgct gcgctactac ttcgccgccc
     6061 aagacataca cgaacgcatc agctccgccc acgtcgacta ccaagagatg tccgaaaaat
     6121 tcaaaaacac cgacatcatc ttccgcatcc accgcctgct cgaaatgcag ggacaagcct
     6181 gccgcaacac cgcccaagcc ctgcgcgcaa gcaaagacta cgtttacagc aaacgcctcg
     6241 gccgcgccat cgaaggctgc cgccaatcgc tgcgcctcct ttcagacagc aacgacaatc
     6301 ccgacatccg ccacctgcgc cgccttctcg acaacctcgg cagcgtcgac cagcagttcc
     6361 gccaactcca gcacaacggc ctgcaggcag aaaacgaccg catgggcgac acccgcatcg
     6421 ccgccctcga aaccggcagc ctcaaaaaca cctggcaggc aatccgtccg cagctaaacc
     6481 tcgaatcagg cgtattccgc catgccgtcc gcctgtccct tgtcgttgcc gccgcctgca
     6541 ccatcgtcga agccctcaac ctcaacctcg gctactggat actactgacc gcccttttcg
     6601 tctgccaacc caactacacc gccaccaaaa gccgcgtccg ccagcgcatc gccggcaccg
     6661 tactcggcgt aatcgtcggc tcgctcgtcc cctactttac cccctccgtc gaaaccaaac
     6721 tctggatcgt catcgccagt accaccctct ttttcatgac ccgcacctac aaatacagct
     6781 tctcgacatt tttcatcacc attcaagccc tgaccagcct ctccctcgca gggttggacg
     6841 tatacgccgc catgcccgta cgcatcatcg acaccattat cggcgcatcc cttgcctggg
     6901 cggcagtcag ctacctgtgg ccagactgga aatacctcac gctcgaacgc accgccgccc
     6961 ttgccgtatg cagcaacggc gcctatctcg aaaaaatcac cgaacgcctc aaaagcggcg
     7021 aaaccggcga cgacgtcgaa taccgcgcca cccgccgccg cgcccacgaa cacaccgccg
     7081 ccctcagcag caccctttcc gacatgagca gcgaacccgc aaaattcgcc gacagcctgc
     7141 aacccggctt taccctgctc aaaaccggct acgccctgac cggctacatc tccgccctcg
     7201 gcgcataccg cagcgaaatg cacgaagaat gcagccccga ctttaccgca cagttccacc
     7261 tcgccgccga acacaccgcc cacatcttcc aacacctgcc cgaaaccgaa cccgacgact
     7321 ttcagacagc actggataca ctgcgcggcg aactcgacac cctccgcacc cacagcagcg
     7381 gaacacaaag ccacatcctc ctccaacagc tccaactcat cgcccggcag ctcgaaccct
     7441 actaccgcgc ctaccgccaa attccgcaca ggcagcccca aaatgcagcc tgaaaaagtt
     7501 tcggcatttt gtaagagagg gcagattgtc agacaggttg caagatagtg gataaggctt
     7561 tgcgcagggt aaatgcgtag caactgaacc gtcattccca cgaacctaca tcccgtcatt
     7621 cccacgaaaa cagaaaacca aaa
//
LOCUS       DAWEYF010000094         7594 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.094, whole genome shotgun sequence.
ACCESSION   DAWEYF010000094 DAWEYF010000000
VERSION     DAWEYF010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7594
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.094"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(75..1421)
                     /gene="mnmE"
                     /locus_tag="WGN93_001401"
     CDS             complement(75..1421)
                     /gene="mnmE"
                     /locus_tag="WGN93_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ0227303.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RTATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1552..1707
                     /locus_tag="WGN93_001402"
     CDS             1552..1707
                     /locus_tag="WGN93_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227304.1"
                     /translation="MEKRNTYALLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1704..2135
                     /locus_tag="WGN93_001403"
     CDS             1704..2135
                     /locus_tag="WGN93_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ0227305.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2269..6618
                     /gene="app"
                     /locus_tag="WGN93_001404"
     CDS             2269..6618
                     /gene="app"
                     /locus_tag="WGN93_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ0227306.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGRNPDQHRFSYQIVKRNNYKPDNSHPYNGDYHM
                     PRLHKFVTDAEPVEMTSDMRGNTYSDKEKYPERVRIGSGHHYWRYDDDKHGDLSYSGA
                     WLIGGNTHMQGWGNNGVVSLSGDVRHANDYGPMPIAGAAGDSGSPMFIYDKTNNKWLL
                     NGVLQTGYPYSGRENGFQLIRKDWFYDDIYRGDTHTVFFEPRSNGHFSFTSNNNGTGT
                     VTETNEKVSNPKLKVQTVRLFDESLNETDKEPVYAAGGVNQYRPRLNNGENLSFIDYG
                     NGKLILSNNINQGAGGLYFEGDFTVSPENNETWQGAGVHISEDSTVTWKVNGVANDRL
                     SKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVSGRGTVQLNA
                     DNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNATTTSTVTITGNESI
                     TQPSGKNINRLNYSKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLSGGTNLNG
                     NITQTNGKLFFSGRPTPHAYNHLGSGWSKMEGIPQGEIVWDNDWINRTFKAENFHIQG
                     GQAVISRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEKTITDDKV
                     IASLTKTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNGNLSLVGN
                     AQATFNQATLNGNTSASGNASFNLSNNAAQNGSLTLSDNAKANVSHSALNGNVSLADK
                     AVFHFENSRFTGQLSGSKDTALHLKDSEWTLPSGTELGNLNLDNATITLNSAYRHDAA
                     GAQTGSVSDTPRRRSRRSLLSVTPPTSVESRFNTLTVNGKLNGQGTFRFMSELFGYRS
                     DKLKLAESSEGTYTLAVNNTGNEPVSLDQLTVVEGKDNKPLSENLNFTLQNEHVDAGA
                     WRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAEKDNAQSLDALIAAGRDAAEKT
                     ESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAETRPATTAFPRARRARR
                     DLPQPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAEDRRNAVW
                     TSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDDGIGNS
                     ARLAHGAVFGQYGIGRFDIGISTGAGFSSGSLSDGIGGKIRRRVLHYGIQARYRAGFG
                     GFGIEPYIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHISITPY
                     LSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAKGPQLE
                     AQHSAGIKLGYRW"
     gene            complement(6934..7095)
                     /locus_tag="WGN93_001405"
                     /pseudo
     CDS             complement(6934..7095)
                     /locus_tag="WGN93_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1946 a         2192 c         1868 g         1588 t
ORIGIN      
        1 aaacggatcg gattcccgtt tttatgggat aacggaatgt tcagccggac accgccacga
       61 tgctttcgat ccgtttattt tccgatgcag aatctcgaaa aaatcacgcc gagcaggtcg
      121 tccgccgtaa actcgcccgt gatttcgccg catgcgacct gagccaagcg caagtgttcg
      181 gcaaacagct cgatttgatg gttgccgcac aatgccgcca gcgacaattc ttcctgcgct
      241 gctttgagtg cgttgacgtg ccgcgtccgc gccaaaaaca gcccttcgct ttcgccctgc
      301 caaccggcct cacgcaacaa cgtccgtttc agcgcgtcca agccgtcgcc agttttcgcc
      361 gacagcgcga tgacggtttc cgcgcccgta ccgaacccgc ctgccgcgtg tgcgtgcaaa
      421 tcggatttgc tgtggatttc gatgcgtttc aactccggcg gcaacgcgtc caaaatcgcc
      481 cgtgtctttt cattcaaacc ctcgcgcgga tcgaccaaca ccagcgcgac atcggcttcg
      541 gatacggctt tgcggctgcg ttcgatgccg atgcgttcga ccacgtcgtc cgtctcgcgc
      601 aaacctgccg tatcgacaat atgcaccggc acgccgtcaa tcaggatacg ttccctgacc
      661 gcgtcgcgcg tcgttccggc aatatcggta acaatcgcca cttcgtcgcc cgccagcgcg
      721 ttcaacaggc tggatttgcc gacattcggc gcgccgacca atacgacatt cagaccttcg
      781 cgcaaaatcg cgccctgctg cgcgttggca agcacatcat ccacggcgcg gcgcaagccg
      841 tccagtttgc cgcgtgcgtc tgccgcttcg agaaaatcaa tgtcttcctc gggaaaatcc
      901 agcgtcgctt cgaccagcat ccgcaaggta atcaaatctt cgaccagacc gtgtatccgc
      961 cgcgaaaaat cgcccttgag cgagcgcaac gccagacgcg ccgccgaacg gctggatgcg
     1021 tcaatcaaat ccgccacgcc ttccgcctgt gccaagtcca gtttgtcgtt caaaaacgca
     1081 cgtttggtaa actcgcccgg ttcggcaagg cgcgcgccca attccaaaca gcggttcagc
     1141 agcatatcca tcaccaccgg cccgccgtgt ccctgaagct cgataacatc ttcgcccgta
     1201 aaacttgccg gtgcggcaaa aaacagcaaa agcccgctgt cgattgcctg accgtccgcg
     1261 tccgtaaaat cagcataggt tgcggtacgc ggtttgggcg ttttcccaca caaagcctct
     1321 gccatcggca gcaggttttt ccccgatatg cgtatcacgc ccacgccgcc gcgcccgggt
     1381 gcggtagcga ctgccgcaat cgttggaacg ttatccgaca taaaaccccc gaaaattcaa
     1441 aacagccgcg attatagcaa atgccgtctg aagtccgacg gtttggcttt cagacggtat
     1501 aaaaccgcaa aaatgcttga taaatccgtc cgcctgacct aatataacca tatggaaaaa
     1561 cgaaacacat acgccctcct gctcggtata ggctcgctgt tgggcctgtt ccatcccgca
     1621 aaaaccgcca tccgccccaa tcccgccgac gatctcaaaa acatcggcgg cgattttcaa
     1681 cgcgccatag agaaagcgcg caaatgaccg aaaacgcaca ggacaaggcg cggcaggctg
     1741 tcgaaaccgt cgtcaaatcc ccggagcttg tcgagcaaat cctgtccgac gagtacgtgc
     1801 aaataatgat agcccggcgt ttccattcgg gaccgttgcc gccgccgtcc gacttggcgc
     1861 aatacaacga cattatcagc aacggggcag accgcattat ggcaatggcg gaaaaagaac
     1921 aagccgtccg gcacgaaacc atacggcaag accaaacctt caacaggcgc gggcaactgt
     1981 acggcttcat cagcgtcatc ctgatactgc tttttgccgt cttcctcgta tggagcggct
     2041 accccgcaac cgccgcctcc cttgccggcg gcacagtggt tgccttggcg ggtgctttcg
     2101 tgattggaag aagccgagac caaggcaaaa attaatgaca aatcctaggg cgtgcttcat
     2161 atccgcccga acgccgaacc gcacatatag gcacatcccg cgcgccgccc ggaagcggaa
     2221 gccgcgccct cccaaacaaa cccgaatccc gtcagataag gaaaaataat gaaaacaacc
     2281 gacaaacgga caaccgaaac acaccgcaaa gccccgaaaa ccggccgcat ccgcttctcg
     2341 cctgcttact tagccatatg cctgtcgttc ggcattcttc cccaagcctg ggcgggacac
     2401 acttatttcg gcatcaacta ccaatactat cgcgactttg ccgaaaataa aggcaagttt
     2461 gcagtcgggg cgaaagatat tgaggtttac aacaaaaaag gggagttggt cggcaaatca
     2521 atgacaaaag ccccgatgat tgatttttct gtggtgtcgc gtaacggcgt ggcggcattg
     2581 gtgggcgatc aatatattgt gagcgtggca cataacggcg gctataacaa cgttgatttt
     2641 ggtgcggaag gaagaaatcc cgatcagcac cgtttttctt accaaattgt gaaaagaaat
     2701 aattataagc ctgacaattc acacccttac aacggcgatt accatatgcc gcgtttgcat
     2761 aaatttgtca cagatgcaga acctgtcgaa atgacgagtg acatgagggg gaatacctat
     2821 tccgataaag aaaaatatcc cgagcgtgtc cgcatcggct caggacacca ctattggcgt
     2881 tatgatgatg acaaacacgg cgatttatcc tactccggcg catggttaat tggcggcaat
     2941 acacatatgc agggttgggg aaataatggc gtagttagtt tgagcggcga tgtgcgccat
     3001 gccaacgact atggccctat gccgattgca ggtgcggcag gcgacagcgg ttcgccaatg
     3061 tttatttatg acaaaacaaa caataaatgg ctgctcaacg gagttttaca aaccggctac
     3121 ccttattccg gcagggaaaa cggtttccag ctgatacgca aagattggtt ctacgatgac
     3181 atttacagag gcgatacaca taccgtcttt tttgaaccgc gcagtaacgg acatttttcc
     3241 tttacatcca acaacaacgg tacgggtacg gtaacagaaa ccaacgaaaa ggtttccaat
     3301 ccaaagctta aagtacagac agtccgactg tttgacgaat ctttgaatga aactgataaa
     3361 gaaccagttt acgcggcagg gggtgttaat cagtaccgtc caaggttaaa caacggtgaa
     3421 aacctttctt ttatcgatta cggcaacggc aaactcatct tatcaaacaa catcaaccaa
     3481 ggcgcgggcg gtttgtattt tgaaggtgat tttacggtct cgcctgaaaa caacgaaacg
     3541 tggcaaggcg cgggcgttca tatcagtgaa gacagtaccg ttacttggaa agtaaacggc
     3601 gtggcaaacg accgcctgtc caaaatcggc aaaggcacgc tgcacgttca agccaaaggg
     3661 gaaaaccaag gctcgatcag cgtgggcgac ggtacagtca ttttggatca gcaggcagac
     3721 gataaaggca aaaaacaagc ctttagtgaa atcggcttgg tcagcggcag gggtacggtg
     3781 caactgaatg ccgataatca gttcaacccc gacaaactct atttcggctt tcgcggcgga
     3841 cgtttggatt taaacgggca ttcgctttcg ttccaccgta ttcaaaatac cgatgaaggg
     3901 gcgatgattg tcaatcataa tgccacaaca acatccaccg ttaccattac agggaatgaa
     3961 agtattacac aaccgagtgg taagaatatc aatagactta attacagcaa agaaattgcc
     4021 tacaacggtt ggtttggcga gaaagatacg accaaaacga acgggcggct caaccttgtt
     4081 taccagcccg ccgcagaaga ccgcaccctg ctgctttccg gcggaacaaa tttaaacggc
     4141 aacatcacgc aaacaaacgg caaactgttt ttcagcggca gaccgacacc gcacgcctac
     4201 aatcatttag gaagcgggtg gtcaaaaatg gaaggtatcc cacaaggaga aatcgtgtgg
     4261 gacaacgact ggatcaaccg cacgtttaaa gcggaaaatt tccatattca gggcgggcag
     4321 gcggtgattt cccgcaatgt tgccaaagtg gaaggcgatt ggcatttgag caatcacgcc
     4381 caagcagttt ttggtgtcgc accgcatcaa agccatacaa tctgtacacg ttcggactgg
     4441 acgggtctga caaattgtgt cgaaaaaacc attaccgacg ataaagtgat tgcttcattg
     4501 actaagaccg acatcagcgg caatgtcagc cttgccgatc acgctcattt aaatctcaca
     4561 gggcttgcca cactcaacgg caatcttagt gcaaatggcg atacacgtta tacagtcagc
     4621 cacaacgcca cccaaaacgg caaccttagc ctcgtgggca atgcccaagc aacatttaat
     4681 caagccacat taaacggcaa cacatcggct tcgggcaatg cttcatttaa tctaagcaac
     4741 aacgccgcac aaaacggcag tctgacgctt tccgacaacg ctaaggcaaa cgtaagccat
     4801 tccgcactca acggcaatgt ctccctagcc gataaggcag tattccattt tgaaaacagc
     4861 cgctttaccg gacaactcag cggcagcaag gatacagcat tacacttaaa agacagcgaa
     4921 tggacgctgc cgtcaggcac ggaattaggc aatttaaacc ttgacaacgc caccattaca
     4981 ctcaattccg cctatcgcca cgatgctgca ggcgcgcaaa ccggcagtgt gtcagacacg
     5041 ccgcgccgcc gttcgcgccg ttccctatta tccgttacac cgccaacttc ggtagaatcc
     5101 cgtttcaaca cgctgacggt aaacggcaaa ttgaacggtc aaggaacatt ccgctttatg
     5161 tcggaactct tcggctaccg aagcgacaaa ttgaagctgg cggaaagttc cgaaggcact
     5221 tacaccttgg cggtcaacaa taccggcaac gaacccgtaa gcctcgatca attgacggta
     5281 gtggaaggga aagacaacaa accgctgtcc gaaaacctta atttcaccct gcaaaacgaa
     5341 cacgtcgatg ccggcgcgtg gcgttaccaa ctcatccgca aagacggcga gttccgcctg
     5401 cataatccgg tcaaagaaca agagctttcc gacaaactcg gcaaggcaga agccaaaaaa
     5461 caggcggaaa aagacaacgc gcaaagcctt gacgcgctga ttgcggccgg gcgcgatgcc
     5521 gccgaaaaga cagaaagcgt tgccgaaccg gcccggcagg caggcgggga aaatgtcggc
     5581 attatgcagg cggaggaaga gaaaaaacgg gtgcaggcgg ataaagacag cgccttggcg
     5641 aaacagcgcg aagcggaaac ccggccggct accaccgcct tcccccgcgc ccgccgcgcc
     5701 cgccgggatt tgccgcaacc gcagccccaa ccgcaacctc aaccccaacc gcagcgcgac
     5761 ctgatcagcc gttatgccaa tagcggtttg agtgaatttt ccgccacgct caacagcgtt
     5821 ttcgccgtac aggacgaatt ggaccgcgtg tttgccgaag accgccgcaa cgccgtttgg
     5881 acaagcggca tccgggacac caaacactac cgttcgcaag atttccgcgc ctaccgccaa
     5941 caaaccgacc tgcgccaaat cggtatgcag aaaaacctcg gcagcgggcg cgtcggcatc
     6001 ctgttttcgc acaaccggac cgaaaacacc ttcgacgacg gcatcggcaa ctcggcacgg
     6061 cttgcccacg gcgccgtttt cgggcaatac ggcatcggca ggttcgacat cggcatcagc
     6121 acgggcgcgg gttttagcag cggcagtctt tcagacggca tcggaggcaa aatccgccgc
     6181 cgcgtgctgc attacggcat tcaggcacga taccgcgccg gtttcggcgg attcggcatc
     6241 gaaccgtaca tcggcgcaac gcgctatttc gtccaaaaag cggattaccg ctacgaaaac
     6301 gtcaatatcg ccacccccgg tcttgcgttc aaccgctacc gcgcgggcat taaggcagat
     6361 tattcattca aaccggcgca acacatttcc atcacgcctt atttgagcct gtcctatacc
     6421 gatgccgctt cgggcaaagt ccgaacacgc gtcaataccg ccgtattggc tcaggatttc
     6481 ggcaaaaccc gcagtgcgga atggggcgta aacgccgaaa tcaaaggttt cacgctgtcc
     6541 ctccacgctg ccgccgccaa aggcccgcaa ctggaagcgc aacacagcgc gggcatcaaa
     6601 ttaggctacc gctggtaacc gccggatatg ccgaaagggg tctgacgatg ccaccgtgcg
     6661 ctgtcaaacc ctttttctgc cgccgccttg tgcctgctcc attgtctgat aaccgtcaaa
     6721 ttgattttta gcccatgttt ggtgggtcgg ggaaatctat atcttcgtcc gtgccgaaat
     6781 agtctgagac ctttgcaaaa ttcctttccc tcccgacagc cgaaacccaa acacaggttt
     6841 tcgtctattt tcgccccaaa tacctcctaa ttctacccaa ataccccctt aatcctccac
     6901 ggacacccga taatcaggca tccgggctgc tttttaggcg gcagcgggcg cacttagcct
     6961 gttggccgct ttcaaaaggt tcaaacacat cgccttcaga tggctttgtg cactcacttt
     7021 gctcagcccg aaataggctg cccgcgcata gcggaattta cggtgcagcg taccgaagct
     7081 ctgttcgacc acatatagtg gattaaattt aaaccagtac ggtgttgcct cgccttgccg
     7141 tactatttgt actgtctgcg gcttcgtcgc cttgtcctga tttaaattta atccactata
     7201 acgggtcttc gataaatatc ggttacgttt ggtttgcgtt tccgtcagcg gacggttgcg
     7261 gcaggctttg cgcataatgc cgttctgcaa ccgatgttct ttcagatgtt gccggttttc
     7321 cttgctgtcg tagcctttgt cggcatagac ggtcgtacct ttgggcagtc cttccaacaa
     7381 cggcgacagg tgtgtgcact catgggcatt ggtgggagtg atgtacagtt tctcgatata
     7441 gccttccgca tcggtacggg tatgttgttt gtaaccgagt ttgtagaggc tgtttttctt
     7501 tgtccaacgg gcatttttgt ccttactcag tgtggtttga ccgctgactt gtccctcttc
     7561 atcgacttct atggcctgac gctgttcgct gccg
//
LOCUS       DAWEYF010000095         7546 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.095, whole genome shotgun sequence.
ACCESSION   DAWEYF010000095 DAWEYF010000000
VERSION     DAWEYF010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.095"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            24..419
                     /locus_tag="WGN93_001406"
     CDS             24..419
                     /locus_tag="WGN93_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ0227307.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WGN93_001407"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WGN93_001407"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ0227308.1"
                     /translation="MFQKHLQKASGSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKVIGCLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIAATLADMAELFPERRLMLAREITKTFETFLSGTPGELQT
                     ALAADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYNLALSWKNK"
     gene            1375..1722
                     /locus_tag="WGN93_001408"
     CDS             1375..1722
                     /locus_tag="WGN93_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ0227309.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGIILFVEVKYRKNGRFGGSAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIKNITG"
     gene            1727..2320
                     /locus_tag="WGN93_001409"
     CDS             1727..2320
                     /locus_tag="WGN93_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ0227310.1"
                     /translation="MTTLPERVAAHFAESIRAKQEAGEVLAEPAAQAAEMMLQCLMND
                     GKILICGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDYIF
                     SKQVRALGRAGDILVGISTSGNSANVAEAVKAAHEHDMRVVALTGRDGGKIAAMLKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2384..2992
                     /locus_tag="WGN93_001410"
     CDS             2384..2992
                     /locus_tag="WGN93_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ0227311.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3000..3644
                     /locus_tag="WGN93_001411"
     CDS             3000..3644
                     /locus_tag="WGN93_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227312.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3684..4463
                     /gene="map"
                     /locus_tag="WGN93_001412"
     CDS             3684..4463
                     /gene="map"
                     /locus_tag="WGN93_001412"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ0227313.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGSVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4618..4917
                     /locus_tag="WGN93_001413"
     CDS             4618..4917
                     /locus_tag="WGN93_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ0227314.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5155..5529
                     /locus_tag="WGN93_001414"
     CDS             5155..5529
                     /locus_tag="WGN93_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ0227315.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5717..7183)
                     /locus_tag="WGN93_001415"
     CDS             complement(5717..7183)
                     /locus_tag="WGN93_001415"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ0227316.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1923 a         2296 c         1858 g         1469 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaggtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 attgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcgccgcgcg attggttgcc
      661 gtccgccgcc aatgccgtct gaagctcccc cggcgtgccg cttaagaacg tttcaaacgt
      721 tttggtgatt tcgcgcgcca gcattaatcg gcgttcgggg aacagttccg ccatatcggc
      781 aagcgtcgcc gcaattcggt gcggcgtttc aaacatcacg acgggaaacg ccgcccgcac
      841 ccatttggca aacagtttcc tgcgttctcc cgatttcggc ggcacaaaac cgttgaaata
      901 aaaatcggat ccctccacac cggccacgct caaagccgcc attaccgcgc ttgcgcccac
      961 gacggggaca actttaaacc ccgcctcgcg cacgcggcgg gcgagtttcg cgcccgggtc
     1021 gcacacagcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagaca
     1081 gccgataacc ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga cgagtttgcc
     1141 ctgaatgccg tacgcactca aaagctgcgc agtaacgcgc gtgtcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcacg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgccg gaggctttct gcaagtgttt
     1321 ctgaaacata agaatgccgt ctgaaaaaca aacattataa aggttaaacc gattatgcgc
     1381 ttaaaccaca aacagggcga ggcaggcgaa gatgccgcgc ttgccttcct ccaatcccaa
     1441 ggctgcacgc tgcttgcccg caactggcac tgcgcctacg gcgaaatcga cctgattgtc
     1501 aaaaacggcg gcataatact gttcgttgaa gtaaaatatc gcaaaaacgg gcggttcggc
     1561 ggttcggcat acagcatttc gccgtccaaa ttattgaaac tgcaacgaag tgtagagtat
     1621 tatctgcaac agaacaggct gaccaacgta ccgtgccgcc tcgacgcggt actcatcgaa
     1681 ggcagccgac cgcccgagtg gataaagaat attacaggtt gacgatatga cgacattacc
     1741 agaacgcgtt gccgcccatt ttgccgaaag catccgcgcc aaacaggaag ccggggaagt
     1801 gctcgccgaa cccgccgcgc aggctgccga gatgatgctg caatgcctga tgaacgacgg
     1861 caaaatcctg atatgcggca acggcggttc ggctgccgac gcacagcatt tcgccgccga
     1921 aatgaccggg cgttttgaaa aagaacgtat ggaactcgcc gccgtcgccc tgaccaccga
     1981 cacgtccgcc ctgaccgcca tcggcaacga ctacggcttc gattatatct tcagcaaaca
     2041 agtgcgcgcc ctcggacgcg ccggcgacat cctcgtcggc atttccacct ccggcaattc
     2101 cgccaacgtc gccgaagccg tcaaagccgc ccacgaacac gatatgcgcg tcgtcgcact
     2161 gaccggccgc gacggcggca aaatcgccgc gatgctcaaa gacaccgacg tactgctcaa
     2221 cgtcccccat ccgcgcaccg cccgcattca ggaaaaccac atcctgctga tacacgccat
     2281 atgcgactgt atcgactccg tactgctgga aggaatgtaa cccttttcag acggcatggc
     2341 gcaaagcaat gccgtctgaa acgcccaaga aaggaagccc ccgatgaaac ccaaaccgca
     2401 caccgtccgc accctgattg ccgccatttt cagccttgcc cttagcggct gcgtcagcgc
     2461 agtaatcgga agcgccgccg tcggcgcgaa atccgccgtc gaccgccgaa ccaccggcgc
     2521 gcaaaccgac gacaacgtta tggcgttgcg tatcgaaacc accgcccgct cctatctgcg
     2581 ccaaaacaac caaaccaaag gctacacgcc ccaaatctcc gttgtcggct acaaccgcca
     2641 cctgctgctg ctcggacaag tcgccaccga aggcgagaaa cagttcgtcg gtcagattgc
     2701 acgttccgaa caggccgccg aaggcgtata caactacatt accgtcgcct ccctgccgcg
     2761 cactgccggc gacatcgccg gcgacacttg gaacacatcc aaagtccgcg ccacgctgtt
     2821 gggcatcagc cccgccacac aggcgcgcgt caaaatcgtt acctacggca acgtaaccta
     2881 cgttatgggc atcctcaccc ccgaagaaca ggcgcagatt acccaaaaag tcagcaccac
     2941 cgtcggcgta caaaaagtca tcaccctcta ccaaaactac gtccaacgct gactcggcaa
     3001 tgccgtctga accgccttca gacggcattg cccgacaccc caaaagcaca atcaaaatgg
     3061 caaaaaaacc gaacaaaccc ttcaggctga cccccaaact cctgatacgc gtcgtattgc
     3121 tcatctgtat caccgccatc ggcgcattgg caataggcat cgtcagcaca ttcaacccga
     3181 acggcggcaa aaccctccaa accgaaccgc aacacaccga cagcccccgc gaaaccgaat
     3241 tctggctgcc aaacggcgta gtcggacaag atgccgccca acccgaacac caccacgccg
     3301 cctcatccga acccgcacag ccggacggca cagacgaaag cggcagcgga ctgccgtccc
     3361 ctgccgcacc caagaaaaac cgggtcaaac cgcaacctgc cgacacagct caaaccgaca
     3421 ggcagccgga cgacgccgga acacaagctg aaaacacact caaagaaacc cccgtactgc
     3481 ccacaaacgt cccccgtccc gaaccccgaa aagaaacacc cgaaaaacag gcgcagccca
     3541 aagaaacgcc caaagaaacg cccaaagaaa accataccaa accggacacc ccgaaaaaca
     3601 cgccgcccaa accccataaa gaaattctcg acaacctctt ctgacccggc acggcaggca
     3661 cacccgcaat ccaaggaagc attatgaacg gcatcatcat caaaaccccc gaagaaatcg
     3721 aaaaaatgcg cgagctgggc aaactcgtcg ccgaagccct cgactacatc ggacaattcg
     3781 tcaaacccgg cgtaaccacc gacgaaatcg acaaactcgt ttacgactac cacgtcaacg
     3841 tccaaggcgg ctatcccgcc cccctgcact acggcaaccc gccctacccc aaatcctgct
     3901 gcacctccgt caaccacgtc atctgccacg gcattcccga cgacaagccg ctcaaagaag
     3961 gcgacattat caacatcgac ctcaccatca aaaaagacgg cttccacggc gactccagcc
     4021 gtatgtttac cgtcggcaaa gtctccccca tcgcccaacg cctgatcgac gtaacccacg
     4081 cctccatgat ggcgggcata gaagccgtca aacccggcgc gacactgggc gacgtaggtt
     4141 acgcctgcca acaggttgcc gaaaacgccg gctattccgt cgtacaggaa ttctgcggac
     4201 acggcatcgg gcgcggtttc cacgaagccc cgcaagtgtt gcactacgga aaaaaaggac
     4261 agggctccgt tctaaaaccg ggtatgattt ttaccgtcga accgatgatc aaccaaggca
     4321 aacgccacct gcgtatcctc aacgacggct ggacggtggt taccaaagac cgctccctct
     4381 ccgcccaatg ggaacacgaa gtcttggtga ccgaaaccgg ctacgaaatc ctcaccgtca
     4441 gccccgcctc cggcaaaccc tgaagccgga cgtatccgcc ccataaaaac aaacaatgcc
     4501 gtctgaaaga aacggcagat atgatatata atataaaaac aggcttgacc cggcacatta
     4561 cgaaaacaaa gcaaatcgga atttgccccg caaccagaca aacttaaagg aagttttatg
     4621 aaaatatttg aaaatataga agatgttaaa gccatccgta aaaagaccgg gctgaaccag
     4681 atagacttct ggggcaaggt cggcgttacc cagtctggag gctcgcgcta cgaaaccggc
     4741 cgcaaaatgc ccaaacccgt acgcgaactg ctccgcctcg tccatatcga atgcatcgat
     4801 ttggcgaaag tcaacaaaaa agatatggaa atcgccgccc tgttgaaaaa acaccatccc
     4861 gacctgtatg ccgagttgtc caaacagacc aagtccgaaa gaaaaaaaca aagttaaacc
     4921 gcaacctccg gatgcccgac agtttttcat ttccgaaaaa cgcaaacaat gccgtctgaa
     4981 acaccggaca ggccgccgta tcccgcctgc cgcccctgcc tcaaaccgcc gaaccgcccg
     5041 aacccgcctt tttacaaact ttatccaatt tcctgtttat ttcaggatac gccgacatta
     5101 gaatgtcaaa cagctcgaaa cgggcaaact ccacatccat ccaaaggaat aaaaatgaaa
     5161 cttctgacca ccgcaatcct gtcttccgca atcgcgctca gcagtatggc tgctgctgcc
     5221 ggcacgaaca accccaccgt tgccaaaaaa accgtcagct acgtctgcca gcaaggtaaa
     5281 aaagtcaaag taacctacgg cttcaacaaa cagggtctga ccacatacgc ttccgccgtc
     5341 atcaacggca aacgtgtgca aatgcctgtc aatttggata aatccgacaa tgtggaaaca
     5401 ttctacggca aagaaggcgg ttatgttttg ggtaccggcg tgatggatgg caaatcttac
     5461 cgcaaacagc ccattatgat taccgcacct gacaaccaaa tcgtcttcaa agactgttcc
     5521 ccacgttaat caggcaacaa aaaacagcgt tttcagaaat gaaaacgctg tttttttgac
     5581 cgttccatta ttcgcaaaag ggaaaaaacg attacctgcc ccgtgtatca aaacctgccc
     5641 tgccggatga agggcataac cggcagggac ggcgtcaaca ccatatgggg gtacggcttt
     5701 tcttgaaaga ttcggcttaa atatccaata ctttcgcggt ataggcgata atttcatccg
     5761 ccctttcagg gttttcgttc aacttgatgc cgtaacccgg taccagctct ttcagacggt
     5821 cttcccaaga cggggcgcgc tcggggaagc attggtgcat cagccggatc atcagcggca
     5881 cagcggtcga tgcgcccggc gacgcgccca gcaatgcggc gagtgagccg tcggcgtggg
     5941 cgacaatctc cgtaccaaac tggagcacgc cgcctttttc ggagtctttt ttaatgattt
     6001 ggacgcgttg ccctgcggtg atgagttccc agtcgtcggg gtttgcctcg gggtagtatt
     6061 ccagcaggga ggcgaagcgt tcttctttgg ttttacgcaa ttcgcccagc aggtatttgg
     6121 tcagcggcat attcgcccag ccggcgcaca gcataggata gaggttgtcc atatggatgg
     6181 acagcggcaa atccataagc gagccttgct tgaggaagtt ggaacggaag cctgcgtaag
     6241 ggccgaacat aaggtggcgt ttgccgtcca cgttgcgtgt gtcgaggtgc gggacggaca
     6301 tcggcggcgc gccgacggaa gcctgcccgt acactttggc gttgtgttgt tcggcggttt
     6361 cggggttgct gttgcggaag aacaggccgg acacggggaa gccgccgtag cctttgcctt
     6421 cggggatgcc ggatttttgc agcagggtca gcgcgccgcc gcccgcgccg aggaagagga
     6481 agcgggtacg gagggtgagc tgcccgtcgg ggttgcgggt atcggcggtt ttgagcaccc
     6541 acgcgccgtc ggattcgcgt ttgatgtctt cgacgtggcg gttgaactcg gtttttacgc
     6601 ccttgccctg caaatatttc accatttggc gcgtcagccg tccgaaatcg acatccgtac
     6661 cttcggcgga gtagttggcg gcgacgggtt ggttttcgtc ccggccgcgc atcatcagcg
     6721 gagcccaatc ggaaattttg ttccgatcgg tggaaaattc catattttca aaaagttttt
     6781 gggttttaaa cgcgtcataa cgtttttgaa gataagaaca atggtcttca ttcatcacca
     6841 aagacatatg cggcacggca ttgatgaagg aattgtcttc caacttgcct tccgcgacca
     6901 gcgtcgccca aaactggcgg ctgacatgaa actgttcggc aatattgagg gcgcgcgccg
     6961 gatcgataat cccatttgca cccaacggcg catagttcaa ttcgcacagc gcggaatgcc
     7021 ccgtgccggc gttgttccac gcgtttgacg attccaacgc cacatcttcc aagcgttcaa
     7081 tcagggtgat ttcccaagac ggttcgagtt ctttgagcaa aacgcccaaa gtcgcgctca
     7141 taatgccgcc gcccaccaag acaacgtctg tcgcttcagc catggtttac tcctaaaaaa
     7201 caggcatctt ctgcccttat ggttatttgc cgtactacaa acgcctgaat cgcaaaagca
     7261 gggaaaaccg gcaatggtgt gtgtccgagt atgctgtttc ggggttggaa tgcgttgcaa
     7321 gtatggcttc cgacaccgct tcaggggctt gtaatatgtt atcgtgaatg tagtggattt
     7381 tactgggaaa tgcaaagttt ttctgtcgcc cgccaagtcg ggaaactgcg aaatgaaaaa
     7441 taaaaatagt tatttatcta tatatatcaa atttttaata gataaaaaat caaaattgtt
     7501 tatatattaa tttttaaaag attgtcagca tattgcgtta agtttt
//
LOCUS       DAWEYF010000096         7454 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.096, whole genome shotgun sequence.
ACCESSION   DAWEYF010000096 DAWEYF010000000
VERSION     DAWEYF010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7454
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.096"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            156..329
                     /locus_tag="WGN93_001416"
     CDS             156..329
                     /locus_tag="WGN93_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ0227317.1"
                     /translation="MKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVI
                     RKEAGKSLSQPEK"
     gene            393..1676
                     /gene="hemL"
                     /locus_tag="WGN93_001417"
     CDS             393..1676
                     /gene="hemL"
                     /locus_tag="WGN93_001417"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ0227318.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGSAIVGHAHPEVIEAVREAALGGLSFGAPTEGEIVIAEEIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIEGFKQFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAE"
     gene            complement(1892..2164)
                     /locus_tag="WGN93_001418"
     CDS             complement(1892..2164)
                     /locus_tag="WGN93_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HEZ0227319.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2175..2738)
                     /gene="orn"
                     /locus_tag="WGN93_001419"
     CDS             complement(2175..2738)
                     /gene="orn"
                     /locus_tag="WGN93_001419"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ0227320.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERTTP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2756..3643)
                     /gene="prmA"
                     /locus_tag="WGN93_001420"
     CDS             complement(2756..3643)
                     /gene="prmA"
                     /locus_tag="WGN93_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ0227321.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETIEDQDWVR
                     LTQAQFDPIRISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3761..5122)
                     /gene="accC"
                     /locus_tag="WGN93_001421"
     CDS             complement(3761..5122)
                     /gene="accC"
                     /locus_tag="WGN93_001421"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ0227322.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFITEEERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5235..5690)
                     /locus_tag="WGN93_001422"
     CDS             complement(5235..5690)
                     /locus_tag="WGN93_001422"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ0227323.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5672..5929)
                     /locus_tag="WGN93_001423"
     CDS             complement(5672..5929)
                     /locus_tag="WGN93_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ0227324.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6046..7086
                     /gene="queA"
                     /locus_tag="WGN93_001424"
     CDS             6046..7086
                     /gene="queA"
                     /locus_tag="WGN93_001424"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ0227325.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1552 a         1875 c         2217 g         1810 t
ORIGIN      
        1 agacggaaga gggaatcgca caaacggttg ttaaaggcaa aacgactcgg gcggaggtag
       61 aggcacgttt cgggaagcgc aaccctttcg gttgttatgc ctatcatgaa gtcagcctgc
      121 cgatttataa ttttttgccg accaatttca tttatatgaa atcagaacgc cggcattggg
      181 agtggtgtgt ggattacgac tgggaaggag ttgtccggga ctaccgcttt acacataaag
      241 tggaaaaaga cgagcgttcc gtcatccggg atgcggttgg cgtcatccgc aaagaagcag
      301 gcaaatcctt gtcgcaacct gaaaaatgat aaaatgggac tttctgcttc taagcccgaa
      361 acctgccgtt cagacggcat ttgaggataa atatgaaccg taacgaaatt ttattcgacc
      421 gcgccaaagc catcatcccc ggcggcgtga attcccccgt ccgcgcattc ggcagcgtcg
      481 gcggcgtacc gcgcttcatc aaaaaagccg aaggcgcgta tgtttgggat gaaaacggca
      541 cgcgctacac cgactatgtc ggctcgtggg ggtctgcgat tgtcggccac gcgcaccccg
      601 aagtcatcga agccgtgcgc gaagccgcgt tgggcggttt gtcgttcggc gcgcctaccg
      661 agggcgaaat cgtcatcgcc gaagaaatcg ccaaaatcat gccgtccgtc gaacggctgc
      721 gcctcgtcag ctccggtacc gaagcgacca tgaccgccat ccgtctggca cgcggcttta
      781 ccggccgtga caaaatcatc aaatttgaag gctgctacca cggccattcc gacagcctgt
      841 tggtgaaagc aggcagcggt ctgctcacct tcggtaatcc ctcttccgcc ggtgtgcctg
      901 ccgactttac caaacacact ttagtcctcg aatacaacaa catcgcccaa ctcgaagaag
      961 cctttgctca aagcggcaat gacattgcct gtgtgatttt ggagcctttt gtcggcaata
     1021 tgaatctggt taggccgtct gaagccttcg tcaaagccct gcgcgaattg accgaaaaac
     1081 acggcgcagt gttgatttac gacgaagtga tgaccggttt ccgcgtcgcg ctcggcggcg
     1141 cacaatcgct gcacggcatc acgcccgacc tgaccacgat gggcaaagtc atcggcggcg
     1201 gtatgccact tgccgcgttc ggcggacgca aagacattat ggaatgtatt tccccgctgg
     1261 gcggcgtgta tcaggcaggc accttgtcgg gcaacccgat tgccgtcgcc gccggtttga
     1321 aaacgctgga aatcatccgc cgcgaagggt tttatgaaaa cctgacggcg cgtaccgaac
     1381 agttggttca aggttttcgg acggcagcgg atgcggcggg catcgagttc accgccgaca
     1441 gcgtgggcgg tatgttcggt ctgtatttcg ccgcacacgc gccgcgaaac tatgccgata
     1501 tggcgcgttc caatattgaa ggcttcaaac agtttttcca cgggatgctc gaccgcggca
     1561 ttgcctttgg cccgtccgct tatgaagcag gtttcgtttc cgccgcgcat acgcccgagc
     1621 tgattgacga aacggttgcg gttgcggttg aagtgttcaa ggcgatggct gaatgatgtt
     1681 ttgacggaca gggtttctct gttcgatctg tttggcagat tgaagtaaga atgcacaccg
     1741 ccgtcattcc cgcgcaggcg ggaatctaga cctttcagtt tctgtaatga ttgaaaataa
     1801 cgggccgaaa tcagccgcgc ccggcaggaa gccgccgcca cctgaaacaa tgccgtctga
     1861 agccttcaga cggcatttta tcggaagcgc atcagaaaaa acggatagcg acatatgcgg
     1921 taaaagcaag ggcaattaca tagataaacc cctttataaa ttcaaaagtc tcatctatat
     1981 cgctatattt ttctttcagt tcgtcagatt ttcgataacg tttcattttc aagaccactt
     2041 catgaccaac aagcccgacc ttccggattc ccgcctgcgc gggaatgacg ggcgtgtata
     2101 tttttgattt caatctgctg taaaaatgcc gtctgaaatg caggatttgc gcttcagacg
     2161 gcattttttg tttcttattg cgcttcggct ctcggggcgg aaatcagaaa gtgttcgcgg
     2221 tagtggcgca tttcttcgat gctctccaaa atgtcgtcca atgccttgtg cgaaccgcgt
     2281 ttgaccacgc ttttggcaac gggcggattc cagcgtttgg caagctcttt gagcgtggaa
     2341 acgtcgaggt tgcggtagtg gaagtagttt tccagtttcg gcatatattt gaccataaaa
     2401 cgccggtctt ggtggatgga attgccgcac atcggcgtgg tgcgttcggg tacccattcc
     2461 gacataaagt ccagcagttt ctgttcgact tcggcttcgg tatgcgacga ttcgcgtacg
     2521 cgctgcgtca gccccgtcct gccgtgtgtg gcggtgttcc actcgtccat attgtcgagc
     2581 agctcgtcac tttggtggac ggcgtaaact tcggattgcg ccaatacatt caaatccgag
     2641 tcggtaataa tcatcgcgac ttcgataatg cggtcggttt cgggattaag ccccgtcatt
     2701 tccatatcga gccagcagag gttgttttta tcctgcacgg tgtttccttt ccgtttcagc
     2761 gttttacgcc gctcaatcgc gcccatcctt cttcggtttc cgcagggtcg aggtcgaacc
     2821 attggctgta aatgccgccg agttcttcgg cttgttcgtc caacaaaccg gataacacga
     2881 tgcggccgcc ttgtttggtg cgggcggcga gcatttcgcc gagcatacgt aaagggttgg
     2941 cgaggatgtt ggcgacaact acgtcgaatt gcccttgagg cagaccgtcg ggcaggaaga
     3001 attgtgcatc gacgttgttc tgttcggcgt tgtccttgcc ggcgcggacg gcttgttcgt
     3061 caatatccac gccgacggca gaacctgcgc cgagtttgag ggcggcgatg gtcaggatgc
     3121 ccgaaccgca gccgtagtcg aggacgcttt cgccgttttt gagttgcgta tccagccatt
     3181 tgaggcagag gcgcgtggtc gggtggctgc cggtgccgaa ggcgaggccg ggatcgaggc
     3241 gtaggttgac ggcagtgcct tcgggggctt cgtgccaaga gggggtaatc cacaggcgtt
     3301 cggaaattcg gatggggtcg aattgcgctt gggtcaggcg tacccagtct tggtcttcga
     3361 tggtttcgcc ggtgtatgcc aagtctttta acccgcattc ttgtgcggcg gtttggatga
     3421 tggcggcggc ttcgtcgtgt tcgccgaaca gggcgatgac tttgctctgc tgccagattt
     3481 gttcggcggg cataccgggt tcgccgaaaa tcgcctgttc gttttgcgta ccggcgtagg
     3541 catcttcgat ggcggcggag agtgcgccgt gttccatcag cgcgtcggcg aggcgttcgg
     3601 cgacggcatc gttgacgttg acggtgattt gttggtaggg catagcgggc tttcttaaca
     3661 gaccttcgga atagggtcgt actgtataag gggatgggtg tgtaacggaa atgccgtctg
     3721 aaaacggaca aactgtttca gacggcatat cggggacggc ttatttgtcc tgtttggctt
     3781 tgcgatcttc cagccagtgt tccaaatagt ggatgctgac gccgcctttt tggaaacccg
     3841 catcggcgaa caggtcgcgg tgaagcggcg tattggtttt gatgccggtt accgccagct
     3901 cggcgagtgc gacgcgcatt ttcgccattg cctgttcacg cgttttgccg tgtacgcaga
     3961 ttttgccgat caggctgtcg tagtacggtg ggatgcggta gccttggtaa atgtggctgt
     4021 ccacgcggat gccgaagccg ccgggcaggt ggcagctttc aatcggcccc gggctgggga
     4081 tgaagttgta cgggtcttcg gcgttgatac ggcactcaaa cgcgtggcct tcgacttgaa
     4141 tatccttttg tttgtattgc aacggcaggc cggcggcgat gcgcaattgc tcttgtacga
     4201 tgtccacgcc ggtgatgagt tcggtaaccg gatgctcgac ctgaacgcgc gtgttcatct
     4261 cgataaagaa aaattcgccg tcttcgtaca ggaattcaaa cgtacctgcg ccacgatagc
     4321 cgatgcgttt gcaggcgtcg gcacaggcgt tgccgatttt ggcgcgttct tcttcagtga
     4381 tgaacggagc cggtgcttcc tcgatgactt tttggtggcg gcgttgcagc gaacagtcgc
     4441 gctcggcaag atatacggcg ttgccgtgtt cgtcggcaat cacttggatt tcgacgtggc
     4501 gcggacgttg cagatagcgt tccatgtaaa ccatcgggtt gccgaatgcc gcgcctgctt
     4561 ctgccttggt catttcgaca gattggagga ggtcttcttt tttctcgacc acgcgcatac
     4621 cgcgaccgcc gccgccgcca gaggctttga taatgacggg ataaccgact ttatcggcga
     4681 ttttgaggat ttcttcgccg tcgtcgggca atgcgccgtc agaaccgggg acgcagggta
     4741 cgcctgccgc tatcatcgcg tgtttggcgg agactttgtc gcccatcagg cggatggtgt
     4801 cgggtttcgg gccgataaag gtaaagccgg actgctcgac ctgttcggcg aaatcggcgt
     4861 tttcggcaag gaaaccgtag cccggatgga cagcgtccgc gcagcttact tcggcggcgg
     4921 cgataatggc ggggacgtta aggtagcttt gcgcggaagc ggcagggccg atgcacacgg
     4981 attcgtcggc gagtttgacg tgcaggctgt ctttgtcggc ctcggaatgc acggcgacgg
     5041 tggcaatgcc catttcgcgg caggcacgga gtacgcgtaa tgcgatttcg cctcggttgg
     5101 cgattaaaac ttttttcagc atgatgactg ttcctgtggt tccggcaacc cgtccgtaaa
     5161 aaaaaggtgc gggaacgctg aagggggaaa gcatttcaga cggcatcgga agtttatgcc
     5221 gtctgaaaac aggattatcc gatgatgaag agcggttcgc cgaattcgac gggcgtaccg
     5281 ttttcgacca aaatttcttt gaccgtgccg gatttttcgg cttcgatttc gttcatcagc
     5341 ttcatcgctt cgatgatgca cagcgtgtcg ccggctttaa cctgttggcc gacttcgaca
     5401 aaaggcgcgg cattcgggcc gggtgcgcgg tagaacgtgc cgaccatagg tgatttttgc
     5461 gcgtcggaca aatcgcgggc ggcaggtgcg gcggcaggcg cggatgccgc aacgggtgcg
     5521 gcggcaggcg ttacggccgg cgcggcggca ggtacgggcg cggcgtaaac gggtgcggcg
     5581 gcgatggttc gggtgatgcg gactttttcc tcgccttcgg ttacttcgat ttcggcgata
     5641 cccgattctt caaccaaatc aatcagtttt tttaatttgc gcaaatccat ttctgttcct
     5701 ttaaaggctg ccggtgttcc ggcgggttgt tgcgttggtt tttcagaaaa cagccggctt
     5761 gcggcaacgg cgcaaaccgg gcggaatggt gttcggatac ggttttcctg tggtggaaaa
     5821 caaccgtgag aatgtgttta ttttcccgaa gttgtcggta aatgtccagt aaaatatcaa
     5881 aaaacggcgg tttttggggg aaatgtgcag gaagtttgat tttgcgcaca agatgttcca
     5941 ggttaagagt gtttattcta atctgttggt ttttcggaca aagatgccgt ctgaaaaagg
     6001 gctaaagtgc gtataatggc ggcttgcccg aacgagagtg taaaaatgga tatttcagat
     6061 tttgatttta ccctgcccga aaagctgatt gcccagcatc cgcccgaagt gcgcggcagc
     6121 agccgccttt tggttgcgtt gcccgatatg ccgctgcaag accgggtgtt cggcgatttg
     6181 ccggattatg tcgaggcggg cgacgttttg gtgttcaaca acaccaaagt catgaaggcg
     6241 cggctgtttg ggcagaaaga cagcggcggc aggatcgaag ccctgattga gcgcgtgttg
     6301 gacaaccata ccgcactggc gcacatccgt tcgtccaagt cccccaagcc cggtatgggg
     6361 ctggtgtttg aaggcggcat ccgtgccgtg atggtcgggc gtgagggcga actgttctgc
     6421 ctgcgttttg aaggcggtca aaccgtttac gaacttttgg aacagaacgg acacctgccc
     6481 ctgccgcctt atatcgaacg cgccgccgac gcggacgacg acagccgtta tcaaaccgtt
     6541 tatgccaaat atcagggtgc ggtcgccgcg ccgacggcgg gtctgcattt tacggaagaa
     6601 cttttgcgcc gcctgaaaga caaaggcgca gtaaccgcag aagtaaccct gcacgtcggt
     6661 gcgggaacgt tccagcccgt gcgtgtggaa aaaatcgaag aacacaaaat gcacagcgaa
     6721 tggtttgaag tgccgtctga aaccgccgcc gccgttgagg cggcaaaagc acgggggaac
     6781 aaagtctggg cggtcggcac gacttccatg cgcgccctcg aatctgccgc gcgtgcgacg
     6841 ggtcgtctga aagcggggca gggcgacacc gatattttca tcacgccggg ctaccgtttt
     6901 aatgttgtcg acaggctggt taccaatttt catttgccga aatcgacgct gctgatgctt
     6961 gtcagcgcgt tttcgggtat gggtcatatc cgcgccgcgt atcgttatgc ggtcgaacgc
     7021 gaataccgtt tcttcagcta cggcgatgcg atggttttgg ggcggaacga aggggtggta
     7081 cgttagaaca gccccaagtc tattggggga agacaagtgc cgtctgaacg gacgttcgga
     7141 cggcattctt ttgttgattt gaatgaaagg aactgtatga catagattca ggcgcgagag
     7201 gcgagaaact cagtcattgt tgatgacgcg caatacgtta aaattcattc cgttttggtc
     7261 gtataaacat attacatacg ccattttttt gtattcaagg ctgcctgaaa acagtgggca
     7321 agaatatcta acccaacgaa aagctgaaaa agcaacaaaa aataatctgc accttagtcg
     7381 gttggttagt ccaaccttag gggtgcagac cattcaatct ttcaggctgc ctttgtttgt
     7441 ttataagata aatt
//
LOCUS       DAWEYF010000097         7272 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.097, whole genome shotgun sequence.
ACCESSION   DAWEYF010000097 DAWEYF010000000
VERSION     DAWEYF010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7272
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.097"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(108..2711)
                     /gene="pepN"
                     /locus_tag="WGN93_001425"
     CDS             complement(108..2711)
                     /gene="pepN"
                     /locus_tag="WGN93_001425"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ0227326.1"
                     /translation="MSKIVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLSVKINGAAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASAGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEYSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNSFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLT
                     EAEQTFQFESVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLTHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIGLPKHEKLLAAVEKVISDDLLDNAFKALLLGVPPEAELWDGT
                     ENIDPLCYHQAHEALLDTIAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2847..3641)
                     /locus_tag="WGN93_001426"
     CDS             complement(2847..3641)
                     /locus_tag="WGN93_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ0227327.1"
                     /translation="MTTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLLHGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            complement(4391..5260)
                     /locus_tag="WGN93_001427"
     CDS             complement(4391..5260)
                     /locus_tag="WGN93_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ0227328.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWDGKKRETVLKQHFKHMAKLMLEYGLYWYAPAKRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLI
                     GRTEGLRALVKQFRKGSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLHFYPAWKSFPGEDAKADAQRMNRFIEDRVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5311..5847)
                     /gene="ruvC"
                     /locus_tag="WGN93_001428"
     CDS             complement(5311..5847)
                     /gene="ruvC"
                     /locus_tag="WGN93_001428"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ0227329.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADAP
                     LADRIAVIVRHIGEVVTVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5850..6089)
                     /locus_tag="WGN93_001429"
     CDS             complement(5850..6089)
                     /locus_tag="WGN93_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ0227330.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6119..7129)
                     /gene="dusB"
                     /locus_tag="WGN93_001430"
     CDS             complement(6119..7129)
                     /gene="dusB"
                     /locus_tag="WGN93_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ0227331.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLIS
                     DPTLRNTKKTLHRSDFADEGGVVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVRAAGVPVTLKTRLGWHDDHKNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECAAAILNHIRAIHAFYGDSAGV
                     RIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAEKTDSWACAYRPN
                     AF"
BASE COUNT         1614 a         1906 c         1927 g         1825 t
ORIGIN      
        1 atatgacttt gcggccgttt tgccattgcg taataaaacg atggggaagt gatgataaaa
       61 cgtgtgtgta actatatcag acggcattgt ttttctgttt gacggcctca atccaaaatt
      121 ttgccgacga tttcgcccac gtctttcgac aatccttcct gcgcccgaat gcgctgcaat
      181 gcttgtttca ccaagttttt gcggtgcggc tcgagcttat tgcagagatt gaacgcctgc
      241 actaggcggg cggcgacctg cgggttgaag cggtcgattt caatgacttt gtcggcgata
      301 aagcggtagc cgctgccgtc ttctgcgtgg aaatgcggga cgttgcggct gaagctgccg
      361 atgagcgaac gggctttgtt ggggttttcg aggctgaatt tcggatgctg caaggcggtt
      421 tgaacctgtt gcagggtgtc gctgcgacgg cttgagccga cgagggcgaa atatttgtcc
      481 atcaccagcg cgtcgtctga aaacttgtcg gcaaactgcg ccagcaggcg gttgcgcgta
      541 tcgctttcgt tgccgttgac ggcggacagg atgccccatt cgtgggtcat gttttgcgcc
      601 atttcgccgt atttttcggc aacggtttcg atgtgcgcgg ggtcggcgcg caggacgaag
      661 gcgcggcaga cgttgcgcag cgtgcgccag ccggcagctt cggggctgta ctcgtagctt
      721 tggttttcct gcttcgccgc ctgacggttc aattcgtgcc atttcggcag gaagcggacg
      781 gcgattgtat ccaacaaggc ttcgtgcgcc tgatggtagc acaacgggtc gatgttttcc
      841 gtgccgtccc acagctcggc ttcaggcggc acgcccaaaa gcagggcttt gaaggcgttg
      901 tctaagaggt cgtctgaaat gactttttcg acggcggcaa gcagtttttc gtgtttcggc
      961 aacccgatgc cgtctgaaag cgcggcaagg ttggcggcga cggcgcggcg gtagagcgtt
     1021 tgggcggctt cccagcgcgt gaaggcgtcg ctgtcgtggg tgagcaggag cagcaggtcg
     1081 tcgtcgctgt acggatagtt cagatgcact ggcgcgctga acccgcgcag cagcgaggga
     1141 acgacggctt cggttacgct ttcgaactgg aaggtctgtt cggcttcggt cagcagtaac
     1201 acggcttcgg ttgcgcgttt gccctgataa tcgaatgcca ccgcttcgcc gttgcggttc
     1261 agcagcccga ctttgacggg aatcatcatc ggctgcttgt ccgccatatc gggcgtgggc
     1321 ggcacggttt gtttgatggt taactcgaaa ctattgtttt tcagacgacc ttccgcttcc
     1381 aagacgggcg tacccgcctg gctgtaccac aaggcgaact ggtcgagatt gatgccgttc
     1441 gcgtccgcca tcgccgcgcg gaaatcgtcg caggtcacgg cctgcccgtc gtgtcgttgg
     1501 aaatagagct tcatgccttt ttggaagccc tcttcgccga gcaaggtgtg atacatccgc
     1561 accacttccg cgcctttttc ataaacggtc atggtgtaga aattgttcat ctcctcatag
     1621 ctggcggggc gcaccggatg ggcggtcggg cctgcgtctt cggggaactg gtgctggcgc
     1681 agcaggcgga tgttctcgat gcggcgcacg gcgcggctgg cgcggtcgcc ggaaaattct
     1741 tggtcgcgga acacggtcaa cccttctttc agcgaaagct ggaaccaatc gcggcaggta
     1801 acgcggttgc ctgtccagtt gtggaaatac tcgtgtccga ccacggattc gatgccttca
     1861 aaatcggtat cggtggcggt acggctgtcg gcaaggacga acttggtatt aaaaatgttc
     1921 agccccttgt tttccatcgc gcccatattg aaatcgccca cggcgacgac catgaaaata
     1981 tccaagtcgt attccaaacc gaagcgcgtt tcgtcccact tcattgcgtt tttcagcgat
     2041 tccacggcaa agccgacctt gggcttgtcc gcttcggtgg tgtaaaactc gattttgacg
     2101 tttctgccgc tcatggtggt gaaatagtct tccgtgaccg ccaaatcgcc cgcgaccaaa
     2161 gcaaacagat aactcggttt ggcaaacggg tcttcccatt tcacccaatg gcggccgtct
     2221 gaatactcgc cgccgtcgat tttgttgccg ttggagagca aaacgggata gcgttttttg
     2281 tccgcgacga tggtggtcgt gaacttggac atgacatccg gacggtcgat atagaacgtg
     2341 attttgcgga agccctccgg ctcgcactgg gtaaacaggt taccggcgga cgcatacagc
     2401 cccatcagcg atttgttttc cgccggcagg atttcggttt ccacttcgac ggtgaagcgt
     2461 tcggacggca cgtctgcaat cgtcagcgtc tcaccttcca acacataatc cgccgccgcc
     2521 ccgttgattt tgacggacaa gagtttcgcc gaaccgtcca acaccagcgg ctcccctacc
     2581 ctctgcggct caaccgtcaa acgcgacttc acgacggttt gcggttcggc aatatcaaaa
     2641 tgcaggtcgg tttcaaggat gcggtaggca ggcgtttggt aatctttcag ataacggacg
     2701 attttgctca tttttttctt tcaatattgt ttggtttgac tggaaaaggc ttcagacggc
     2761 ataggcaaac cctgcaccga tatgccgtat gaaaccgaaa catcagtgcg gacgcaccgt
     2821 caaacaaccg gttttaattt caatctttat ttccacgctt ggacaaattc tgcccaatgc
     2881 ggtttgtctt ctgtttgggc ggaaagatag tttctgatcc gcttgatttc catttcgtat
     2941 tcgtccgcgt cgaatctgcc gctgaccaga cagaaacgca gatacatcaa atacgtattc
     3001 acggcatcgg tttcacaata attgcggatt tccttcagcc tgcccgcgtg gaacgcatcc
     3061 cacaccttgc tgccgtccat acccagcttg cctggaaaac cgcacagttt cgccatatcg
     3121 tccagcggca cgtttgccct cggctggtaa agcgcgagca aatccatcaa atcgcaatga
     3181 cgttggtggt agcggctgat gtagttgttc cacttgaaat cgcggctgtc gccgaaatcg
     3241 ccgtcaccca tatcccaata gcgcgcggcg ttgatgccgt gtagcagcga acggtaatgc
     3301 agaaccggca ggtcgaaacc gccgccgttc caactgacca gttgcggcgt atgtttttca
     3361 atcaactcga aaaatttggc aatcacgact tcttcgccat cgtccatctc gccgattgta
     3421 ccgacatgga ctttatcctg cccccaacgc atgcagcacg aaatcgccac aatctgatga
     3481 agatgatgct gcataaaatc cccacccgtc tgagcacggc gtttttgctg ggcaaacagc
     3541 accacttcat cgtcgggcag cgaggacggc agctcgtaca atgttcggat accctgcaca
     3601 tcgggtacgg tttcaatatc gaaagccaaa atcgtggtca tgacagcacc ttgtatttaa
     3661 aacagacttg cgcctattgt gtcattaaaa ggcggataaa aaaagaggca accccccaca
     3721 ggattgcccc aatacctcaa atcagagatt tacgcttcac aaacaataca ggctttcgcc
     3781 tgcggctttg cccgcgtagc tcaactctac gccggcaaac ttttgtttca ccgtttccga
     3841 tgaaaccccg accaatcgca agactgaccg gaaaatcctt tcagacggca tttcctgcct
     3901 gtcgtgtaat tccatgtagc gaaatgtacg ccattttcta cgctttgcca agcatttttt
     3961 acaatataaa tgtcaaaaca ttaattttat aaaattgctg aaaatattaa atatatggat
     4021 ttttattttt tatatttcaa taaatataaa tttaattttg atttatattt aaatttaagc
     4081 ataaaatgtc aaatattaaa ggaaacatga aaggcatata ttaaatattt atttataacg
     4141 ctatgttttt aaagaaaatt aattttaata tattaactag attgtctgca tatattcata
     4201 ggtttgcggt atttcttcca aaacctgctt cgaatttccc gaccaagtct taaaaatatt
     4261 gttttttgag atacttaaat agcagcgatt atcaaatgaa atctgttcat ataatctgcc
     4321 attttgcatt taaaaaaaca atcaggagtt tcgactcgaa acgcctgata tgttttgtaa
     4381 ttttacgtag tcagtaaaaa tcggggctgc cttccggacg ggttttaaaa cgcttgtgca
     4441 gccaaaaata ttgttccgga tgttcgcgca ccctgtcttc gataaaacgg ttcatgcgct
     4501 gcgcgtcggc tttcgcgtct tcacccggaa aggatttcca agcagggtag aaatgcaatg
     4561 taaccgtatt gtctgcctcg cggacgggaa tggcgggtat cacttttgca tttgcaagcg
     4621 cggcaatgcg gctcaatccg gtaatcgttg ccgtctgaat accgaaaaaa tccacaaaaa
     4681 ccgaatcgtt gcgtccgaaa tcctgatcgg gcagatacag aaacggcgcg ctgcctttgc
     4741 ggaactgttt gacgagggcg cgcagccctt cggtgcgccc gataaggaaa acgttgtgat
     4801 aacggttgcg gcctttcaaa atctgttcgt ccaatatctt gtttttttgg tgggaataca
     4861 tactaattag cggaacatcc tgattaagcg cgtacaccgc catctcgaac gcggtaaagt
     4921 gcggatacag gatgatgact ttttcccccg ccgccagcgc gtcgtccaaa taatgcttat
     4981 tgcggtaacg caccagcgat ttcaggcgtt tggcaggcgc ataccaatat aagccgtatt
     5041 caagcatcag tttcgccata tgtttgaaat gctgcttcaa tacggtttcg cgcttttttc
     5101 cgtcccactc gggaaagcat tttgccaaat tgatttcgcc gatacggcgg cggggtttga
     5161 ccaaaaggta ggcgagcaaa cccgtcaggt cggcaagttt gtgcagcagc gcaaacggca
     5221 gaaactgcaa aacatacagt acaaaaaata taaatttcat ctcgatacac attttctttt
     5281 cagacggcaa aatacaaatg ccgtctgaaa ctattgaaac ctgccgcgct tgacctgcat
     5341 ccccgaagga ttgagtttgg cggcaagccc gtggttgcgt aaggcgtggg tcagcgcgac
     5401 ggcaagaccg tccgccgcat ccgcctgcgg cgttcccgat aagccgagca tctgcaccac
     5461 catatgctgc acctgttctt ttgccgcctt gcccttgccg actaccgcct gtttgacctg
     5521 caaggccgtg tattccgaaa cgggcagctt atggctgacc aatgccgcca atgccgcgcc
     5581 cctagcctga ccgagcatca gcgtcgatgc cggattgacg ttgacgaaca cctgttccac
     5641 tgccgcctgt tgaggcttgt aaacggtaac gacttcgccg atgtgccgga cgatgacggc
     5701 aatcctgtct gccagaggcg catcggcagg cgttttgatg cagcctgagg caacgtaaaa
     5761 atgatcgcgc cccctgacat cgatgatgcc gaaacccgtt acgcggctgc ccgggtcaat
     5821 gcccaagata cggacggttg ccgacatatt cacagcaaac cgtgttgaat cagtttttta
     5881 cgcaaggtat tgcggttcag tcccaacatg acggaggctt tggactggtt gccgccgcat
     5941 tgctccatca cgcacaccag cagcggtttt tccacctgat gcaataccat atcgtacacg
     6001 ccgcaaggtt cggtaccgtt caggtctttg aaatattgtt ctaaattttg tctgatgcat
     6061 tgggaaatat cgggaagggt atggggcatg attgcacttt caaaggataa tcaagtgttc
     6121 agaaggcatt tgggcggtag gcgcacgccc aactgtcggt tttttcggca agtctttcaa
     6181 gataacctgc aagcatgtcg tattgcgccg ccgcactgtc caagcggttg atttcacgac
     6241 gtgtctgttc gccgtcgggc atttcgtcga tgtaccagcc tatgtgtttg cgtgcgatgc
     6301 gtacgcctgc actatcgccg taaaacgcgt gtatggcgcg gatgtggttc aaaatagcgg
     6361 cggcgcattc tgccaaactc aaggcaggcg gtaaaacacc gtgttcggcg taatgtttca
     6421 aatcgcggaa gaaccacggt ctgccttgcg cgccgcgccc tatcatgatg ccgtcggcgg
     6481 cggtttgttt gaggacggcg gcggcttttt gcggcgaagt gatgtcgccg ttgacccaga
     6541 ccgggatgtt cagacggcat ttggtttcgg caatcaggtc gtaagccgcc tcgcctttgt
     6601 acatttgcgt gcgcgtgcgt ccgtggacgg caagggcggc aatgccgcaa tcttcggcga
     6661 ttttggcgat gacgggcagg tttttgtggt cgtcgtgcca acccaaacgg gttttgaggg
     6721 taacgggtac acctgccgca cggacgacgg cttccaaaat ggcggcaacc agcggctcgt
     6781 tctgcatcag cgcgctaccg gcttggacat tgcagacttt tttagcggga cagcccatgt
     6841 tgatgtcgat aagctgcgcc ccgaggctga cgttgtaacg cgcggcatca gccatctgct
     6901 gcggatcgct gccggcaatc tgcacggcaa cgacaccgcc ttcatcggca aaatcgctgc
     6961 ggtgcagggt ttttttggta tttctgagcg tcgggtcgct gatcagcatt tcgcacaccg
     7021 cccaacccgc gccgaaatcg cggcagaggc ggcggaaggg tttgtcggta atgcccgcca
     7081 tcggtgcaag tgcgatgggg ttgtcgataa aatagccgcc gatgtgcata atgggcccgc
     7141 gtttcaaaaa agtgcgacat tgtacatttt ttaagcagga tttccaatct ccggacgcgc
     7201 ccgcgattgg ggcgggcacc gttttatggc ataatccgca cacagatttc ctgccccgcc
     7261 actcacaggc gg
//
LOCUS       DAWEYF010000098         7264 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.098, whole genome shotgun sequence.
ACCESSION   DAWEYF010000098 DAWEYF010000000
VERSION     DAWEYF010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7264
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.098"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..821
                     /gene="lpt3"
                     /locus_tag="WGN93_001431"
     CDS             <1..821
                     /gene="lpt3"
                     /locus_tag="WGN93_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ0227332.1"
                     /translation="VKQSYSAGFMTAVSLPSFFNVIPHANGLEQISGGDTNMFRLAKE
                     QGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLGYGNGDNMPDEKLLPLFDKINL
                     QQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDKYDNTIHKTDQMIQTVFEQLQK
                     QPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYIVPLVLYSPNKAVQQAANQAFAPCE
                     IAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGDAGSLSIRDGKAEYVYPQ"
     gene            887..4201
                     /locus_tag="WGN93_001432"
     CDS             887..4201
                     /locus_tag="WGN93_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ0227333.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHER
                     FTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMCEWRELHHQLAQT
                     AIEMGLTTKETAFRRPPEIRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRTAKEAG
                     YEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVET
                     TKLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRP
                     VSYGKVAPEEAREIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYNERLPEMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSR
                     QNENHGNTVGWVENPTSAATAKTVGFDNPTYATQQPTPSLAGEGRGEGKTVAAQTNFS
                     ATSVSPLPNPLPQEREQSAAASTVSDGLHPANSQQTAPSLVGEGWGEGKTVAAQTNFS
                     ATSASPLPNPLPQERKQSAAASKVSDDPKPKKRPASPKGRLKPLPLADIRTFEAWLKT
                     AERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLT
                     LPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITKFLESNPDR
                     QAAIIPQLAHFIAKSAGDMRILEQIDQDAWTAQELPEHCYLNLRIIDDGGQELAGGRK
                     LHELQQQLGQAAAVTFRDNTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKE
                     KDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINA
                     DTLCDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAY
                     AELNGKLGKHPLTHLLKLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNP
                     ARDAAREADIQELEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPY
                     PVSVKRLLKEWERLNK"
     gene            4260..5867
                     /locus_tag="WGN93_001433"
     CDS             4260..5867
                     /locus_tag="WGN93_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ0227334.1"
                     /translation="MKSENNYERIVQNSKKFQHSQKNEMQKRITDLLQQLTNGIHERD
                     QIMAVSLLGAIAGHNTFLFGPPGTAKSLISRRLACAFENPQYFEYLMNRFSTPEEVFG
                     PVSIKALKEDRYLRKIEGYLPTADFAFLDEIWKSSPAILNNLLTIINEHIFKNGDERF
                     NVPLKALIAASNEIPPENQGLEALYDRFIIRLLVPPIEQEENFNRLLDSKPSSDKPEI
                     SEDLRISYHELAKWREQLHKVRLSTDTLLIIKYIREELAAQFDKLGVYVSDRRWQRAA
                     VLLKASAFCNGRKETNHSDVILLKYCLWTTPENRESVEQIVMNTIKSCGFDTGIDLAE
                     LDREKESLDKEINKELYHSQDVYETVEMSGKKYFPVQAVFKNVHNSHANKELKIYVPY
                     SKFRSKEKFYPIDSTGNEIQEIECEFDGQGCCKLELKVRGGHWNEQYKPFKFKPNVLF
                     HKGDKKQSINDRLIWSLSRSVMEINKALLDVLKLVTKKHAEHQQFLQSPFITQDDIDI
                     AVSGILDQIDKLNLRIKDCERLESLCR"
     gene            5858..>7264
                     /locus_tag="WGN93_001434"
     CDS             5858..>7264
                     /locus_tag="WGN93_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEZ0227335.1"
                     /translation="MSLNSKLSEQIRWIKASLQIDYADLFKQHGSLNGQIQQRLSDWQ
                     YQTKLALLQKNPFVLHEEKLKKHQQTEIFNQQSVDDYRYFCKLAGVPFEKEFWQQELT
                     QSKNSKPDKQNLPLKLLTEKWQQQLDYAKSQWYLEQLNQLRQEFIDKLKQELDTIRQL
                     AEQLEQFGFEAGLWFDNSIGNLSQQNIEEMKRWLNYLTQDKNAQQIAELLGKMRQIEQ
                     SEKIEQVKQTVYTKSPQIDVNSREEIIGLRLGKDLEYVLPSELALMADEETSTLFDLK
                     FLESKLMCFELQGMTYCDAPTEIIVEQKSQEDEKLGPMILCVDTSGSMVGLPENIAKA
                     MALFLGAKAKSENRSCFVINFSTGIETFELTSKTGISNLIAFLRQSFHGGTDAAPALR
                     HALKMMEQEIYQKADLLMISDFVMNSLPDDLLASIEIQRETGNQFNSLVIGDAFMSKR
                     LKTHFDREWIYNPNVQTIQ"
BASE COUNT         2201 a         1791 c         1634 g         1638 t
ORIGIN      
        1 ttgtgaaaca aagttattcc gcaggcttta tgacggcagt atccctgccc agtttcttta
       61 acgtcatacc gcatgccaac ggcttggaac aaatcagcgg cggcgatacc aatatgttcc
      121 gcctcgccaa agagcagggc tatgagacgt atttttacag tgctcaggct gaaaaccaaa
      181 tggcaatttt gaacttaatc ggtaagaaat ggatagacca tctgattcaa ccgacgcagc
      241 ttggctacgg caacggcgac aatatgcccg atgagaagct gctgccgctg ttcgacaaaa
      301 tcaatttgca gcagggcagg cattttatcg tgttgcacca acgcggttcg cacgccccat
      361 acggcgcatt gttgcagcct caagataaag tattcggcga agccgatatt gtggataagt
      421 acgacaacac catccacaaa accgaccaaa tgattcaaac cgtattcgag cagctgcaaa
      481 agcagcctga cggcaactgg ctgtttgcct atacctccga tcatggccag tatgtgcgcc
      541 aagatatcta caatcaaggc acggtgcagc ccgacagcta tattgtgccg ctggtgttgt
      601 acagcccgaa taaggccgtg caacaggctg ccaaccaggc ttttgcgcct tgcgagattg
      661 ccttccatca gcagctttca acgttcctga ttcacacgtt gggctacgat atgccggttt
      721 caggttgtcg cgaaggctcg gtaacgggca acctgattac gggtgatgca ggcagcttga
      781 gcattcgcga tggcaaggcg gaatatgttt atccgcaata agcgacgtga aaaccaataa
      841 aaacaaattt agatgatgtc ggggaagatg cccgaccgac aagactatgc aaaatatgaa
      901 aaaccaagta cgcggatcag gcatggatgc acgatccaat ccggccaatg tttcagacgg
      961 cctgcaaaac agttcgggtc atatcggtac caacacgcgt taccgcctga ccaaactcgg
     1021 cgaacaaatg gcgcgcctgc ccatcgaccc gaaaatcgcg cgcattttgt tggcggcgaa
     1081 gaaacacgac tgcatggcgg aaatattggt gatcgcgtcc gcactgtcga ttcaagaccc
     1141 gcgcgagcgg ccgctggaag cgcgtgatgc cgccgccaag gcgcacgagc gttttaccga
     1201 caagcaatct gactttcttg cctatctgaa tatttgggac agctttcagc gcgagcgcga
     1261 caaaggtttg tccaacaagc agctggtgca gtggtgccgc caatattttc tgtcgcacct
     1321 gcgtatgtgc gaatggcgcg agctgcacca ccagcttgcc caaaccgcga ttgaaatggg
     1381 tttgaccacc aaggaaaccg ctttcagacg acctcccgaa atcaggcagc tcacgtcgtc
     1441 tgaaaatgcg ggtgaccaag acttatccgc caagctcaaa caaaaacaac tggataaaaa
     1501 gcaacaccgc gcccaaatcc gcaccgccaa agaagcgggc tacgaacaaa tccaccgcgc
     1561 cctgctgacc ggccttatcg ccaacgtcgg catgaaatcg cccgacggca acgactacac
     1621 cggcgcgcgc ggcagccgct tccacctttt ccccgcctcc gccctgttca aagccaaacc
     1681 caaatgggtg atggcggcag aactcgttga aacgacaaaa ctttatgcgc gcgacgtcgc
     1741 cgttatccag cccgaatgga tagagcagga agccccgcac ctcgtccgct accactattt
     1801 cgagccgcac tgggaacaaa aacgcggcga agtcgtcgcc agcgaacgcg tgacgcttta
     1861 cggtctgacc gtattgccgc gccgccccgt gtcttacggc aaagttgccc ccgaagaagc
     1921 gcgcgaaatc tttatccgca gcgcgttggt ggcgcaggaa tgcgatttga aagcggattt
     1981 ttttgtccac aacaaaaagc tgattaaaga aattaccgaa ctcgaacaca aatcgcgcaa
     2041 gcaagacgtg ctggtcgatg acgaagccct gtttgcgttt tataacgaac gactgcccga
     2101 aatggcttgg aaagacgcgc aaggcagcgt ttggggaagt gaagattccg tacggattat
     2161 tgaatctgac aaagccgaga ggtcgtctga aaatgagcgc aacgagtttc gtaaaaacaa
     2221 gcgtaatggg tctcgccaaa atgaaaatca cggcaacacc gtaggttggg ttgaaaaccc
     2281 aacatcagcc gcaactgcaa aaactgttgg gtttgacaac ccaacctatg ctactcagca
     2341 acccaccccc tccctcgcgg gggagggtcg gggagagggc aaaacagttg ccgctcaaac
     2401 taacttttct gcaacttcag taagccctct ccctaaccct ctcccacagg agagggaaca
     2461 gagtgccgcc gcttcaacgg tttcagacgg cctgcatcct gcaaattccc agcaaaccgc
     2521 cccctccctc gtgggggagg gctggggaga gggcaaaaca gttgccgctc aaactaactt
     2581 ttctgcaact tcagcaagcc ctctccctaa ccctctccca caggagagga aacagagtgc
     2641 cgcagcttca aaagtttcag acgaccccaa acccaaaaag cggccggcat ccccaaaagg
     2701 ccgtctgaaa cctttgcccc ttgccgatat ccgcaccttt gaagcctggc tcaaaaccgc
     2761 cgagcgcgac aatccgcgtc tgctgttcct cagccgcgac gatctgatgc aacacgccgc
     2821 cgcgcacatt accgaagagc agttccccaa attttggcaa accgcagacg gcaagttcaa
     2881 actttcctac cgcttcgagc cgcaccatcc gctcgacggc gttaccctca ccctaccgct
     2941 gaccgtcctc aaccgcctgc acgcgccgtc gctcgaatgg ctggtgcccg gtatgttgcg
     3001 cgaaaaaatc cagctgctga ttaaagccct gccgaagcaa atccgccgca tttgcgtgcc
     3061 cgtacccgat ttcatcacca aattcctcga aagcaatccc gaccgccaag cggccatcat
     3121 tccccagttg gcgcacttta ttgccaaaag cgcaggcgat atgcggattc tcgagcaaat
     3181 cgaccaagac gcatggacgg cgcaagaatt gcccgaacac tgctatctga atctgcgcat
     3241 tatcgacgac ggaggacaag agcttgccgg cggccgcaaa ctgcatgaat tgcaacaaca
     3301 actcggccaa gccgccgccg ttaccttccg cgacaacacc caagaattcg agcgcgacaa
     3361 cgtgaccaca tgggacattg gcaccctgcc cgaatccatc aaattcgcac gcggcaaaca
     3421 acagctcacc ggctacctcg gtctgcaaaa agaaaaagac ggccgcatcg ccctgcgcct
     3481 gttcgacacc accgaagccg ccgagcaggc acaccgtcaa ggcgtgatcg aattgatgaa
     3541 actgcaatta aaagagcagg taaaagattt gaacaaaggc atccaaggct tcacccaagc
     3601 cgccatgctg ctcaaacaca tcaacgccga caccctgtgc gacgacctca cccaagccgt
     3661 ctgcgaccgc gcctttatcg gcgaagacga gctgccgcgc aacgaaaaag ccttcaaaga
     3721 acaaatcaaa cgcgcccgca gccgcctgcc cgccgtcaaa gaagccctca gccgctactt
     3781 gcaggaaacc gccgccgcct acgctgaact caacggcaaa ctcggcaaac acccgctcac
     3841 ccatctccta aaactacgcc tgcaaaccct gctcgccgcc ggcttcgcca cccgcacccc
     3901 gtgggcacaa tggccgcgcc tccccatcta cctcaaagcc atgaccctgc gcctcgaaaa
     3961 atacagcagc aaccccgccc gcgacgcagc ccgcgaagcc gatatccaag agctggaaca
     4021 aatgtggcag gaaaaaacag acagcctgat taaacaaggt ctccccattt cagacggcct
     4081 cgccgcgttt aaatggatga ttgaagaatt gagggtgtcg ctgttcgcgc aggaattgaa
     4141 gacaccgtat ccggtgtcgg tgaagcggtt gttgaaggag tgggagaggt tgaataagta
     4201 gtgatattat ccaatacatt tacaggaaaa tttctaactt acataaaagg tacaactcaa
     4261 tgaaaagcga aaataattat gaacgtattg ttcaaaattc taaaaaattc caacactctc
     4321 agaagaatga gatgcagaaa cgcataacag atttgctgca acaactcaca aatggcattc
     4381 atgaacgcga ccaaattatg gcggtttccc tacttggtgc gattgccgga cataatactt
     4441 tcctatttgg accgccggga accgcgaaaa gtctgatttc ccgccgtttg gcatgtgcat
     4501 ttgaaaatcc gcaatacttt gaatacttga tgaaccgttt cagcacacct gaagaagtat
     4561 tcggacctgt atctattaag gcattgaaag aagaccgata tctccgaaaa atcgaaggct
     4621 atttgccaac tgccgatttt gcatttttgg atgaaatttg gaaatccagt cctgcaattt
     4681 tgaataacct gctgaccatt atcaacgagc atatttttaa aaacggcgat gagaggttta
     4741 atgtgccact taaagccctg attgcggctt ccaacgaaat tccacctgaa aatcaaggtt
     4801 tagaggcact gtatgaccgc tttattatcc gtctgcttgt gccgccgatt gaacaagaag
     4861 agaacttcaa ccgtttgctg gatagcaagc caagcagcga caaacctgaa atcagtgaag
     4921 atttacggat tagttatcat gagcttgcca aatggcgtga acaactccac aaagtcaggc
     4981 taagtacaga tacattactg attattaagt atatcagaga agaattagca gcccagtttg
     5041 ataagttagg cgtttatgta tccgaccgac gttggcaacg tgcagccgta ttattaaagg
     5101 cttctgcttt ttgcaatgga cgcaaagaaa ccaatcatag cgatgtgatc ttgctgaaat
     5161 attgtctgtg gacaacacct gaaaatcgag agtcagtgga acaaattgtg atgaatacca
     5221 ttaaatcctg tgggtttgat acaggtattg atctggctga attagataga gaaaaagaga
     5281 gtttggataa ggaaataaat aaggaacttt atcattcaca agatgtttat gagacggttg
     5341 aaatgagtgg aaaaaaatat tttccagtac aggctgtttt caaaaacgta cataatagtc
     5401 atgctaataa agaacttaag atttatgttc catatagcaa atttcgtagt aaagaaaaat
     5461 tttatccaat agatagtaca ggaaatgaaa ttcaagaaat tgaatgtgaa tttgatgggc
     5521 aaggttgctg taaattggaa ttgaaagtgc ggggtggtca ctggaatgag caatataagc
     5581 cattcaaatt taaacctaac gttttattcc ataagggaga taaaaaacaa agcatcaatg
     5641 ataggttgat ttggtcttta tcacgttctg ttatggaaat caataaagca ttattagatg
     5701 tattgaaatt agtcaccaaa aaacatgcag aacatcagca attcctacaa agccctttta
     5761 ttacccaaga tgatattgat attgcggtat caggaatttt agaccaaatc gacaaactca
     5821 atttacggat taaagactgc gaacgtttgg agtctttatg tcgttaaata gcaaattatc
     5881 cgaacaaata agatggatta aagcttctct acaaatagat tatgcagatt tatttaaaca
     5941 gcatggttcg ttaaatggac agattcagca acgtttatca gattggcaat atcagaccaa
     6001 actggctttg ttgcagaaaa acccgtttgt attacatgaa gaaaagctaa aaaaacacca
     6061 acaaacagaa atttttaatc aacagtctgt tgatgattat cggtattttt gcaaattagc
     6121 aggcgtgcca tttgaaaaag aattctggca gcaggaatta acacaaagca aaaattcaaa
     6181 acccgataaa cagaatttgc ctttgaaatt gctaacagaa aaatggcagc agcaattaga
     6241 ctatgccaaa tctcaatggt atttagagca gcttaatcaa ttacgacagg aatttataga
     6301 taagttaaaa caggaactcg acactatccg acagcttgca gaacagttag agcaatttgg
     6361 ttttgaagca gggctgtggt ttgataacag tatcggcaat ttaagccagc aaaatattga
     6421 agaaatgaaa cgctggctga attacttgac ccaagataag aatgcccaac agattgctga
     6481 attactaggc aaaatgcgcc aaatcgaaca atctgaaaaa atcgaacagg taaaacagac
     6541 tgtttacaca aaaagcccac aaattgatgt gaattcgcgt gaagaaatta tcggattacg
     6601 tttaggtaaa gatttagagt atgtattgcc gtctgaattg gctttaatgg cagatgaaga
     6661 aacatcgact ttatttgatt tgaagttttt ggaatccaaa ttaatgtgtt ttgaattgca
     6721 aggaatgacc tattgcgatg ccccaactga aattatagtt gaacaaaaaa gccaagagga
     6781 tgaaaagctc ggaccaatga ttttatgtgt agataccagt ggttcaatgg ttggtctacc
     6841 tgaaaatatt gccaaagcaa tggctttatt tttaggagca aaagctaaaa gcgaaaaccg
     6901 ttcttgtttt gttatcaatt tttccactgg aatagaaact tttgaattaa caagtaaaac
     6961 agggatttcc aatttgattg cttttttacg tcaatccttt catggtggta cagatgctgc
     7021 cccagcttta cgtcatgcgc taaaaatgat ggagcaagaa atctatcaaa aggcagactt
     7081 attaatgatt tccgattttg tgatgaacag cttacctgat gatttgttgg catcaatcga
     7141 aatacaacga gaaaccggta atcagtttaa ttctttggtt attggtgatg cttttatgag
     7201 taaacgccta aaaacacatt ttgatcgtga gtggatatac aatcctaatg ttcagacaat
     7261 tcaa
//
LOCUS       DAWEYF010000099         7230 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.099, whole genome shotgun sequence.
ACCESSION   DAWEYF010000099 DAWEYF010000000
VERSION     DAWEYF010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7230
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.099"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(36..521)
                     /gene="purE"
                     /locus_tag="WGN93_001435"
     CDS             complement(36..521)
                     /gene="purE"
                     /locus_tag="WGN93_001435"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ0227336.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEACVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(561..1277)
                     /locus_tag="WGN93_001436"
     CDS             complement(561..1277)
                     /locus_tag="WGN93_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ0227337.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGRIVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFAAAAALLKGADGGDGGSIAQRSMYL
                     LLQSRVRMGNCESVIEIGRRYANRFKGTPAAPEAIFKIGECQYRLQQKDIARATWRSL
                     IQTYPGSPAAKRAAAAVRKR"
     gene            complement(1277..1945)
                     /locus_tag="WGN93_001437"
     CDS             complement(1277..1945)
                     /locus_tag="WGN93_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ0227338.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPMPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(1956..2141)
                     /locus_tag="WGN93_001438"
     CDS             complement(1956..2141)
                     /locus_tag="WGN93_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ0227339.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            2284..4260
                     /gene="mutL"
                     /locus_tag="WGN93_001439"
     CDS             2284..4260
                     /gene="mutL"
                     /locus_tag="WGN93_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ0227340.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELDGGGIRLIRVSDNGSGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSEATEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFNRASDYPTGNKPDTRNAFGASGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDADLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSPSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGKLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLNELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            4355..6484
                     /gene="dnaX"
                     /locus_tag="WGN93_001440"
     CDS             4355..6484
                     /gene="dnaX"
                     /locus_tag="WGN93_001440"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ0227341.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAATSCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPETETAQTSVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDNAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWQDEAGRETPAMQDKRVQIEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    5544..5583
                     /gene="dnaX"
                     /locus_tag="WGN93_001440"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            6565..6900
                     /locus_tag="WGN93_001441"
     CDS             6565..6900
                     /locus_tag="WGN93_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ0227342.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARDKAEETANKTMGAFTQGL
                     PPGVGDFFR"
BASE COUNT         1786 a         2216 c         1830 g         1398 t
ORIGIN      
        1 aatttaagcc actatatatt cgcggacggc gggttttaaa tctgttccaa ttccatactc
       61 aaaacagcct gttcctgttt ggctcggaag tctgccagtt tttgcgccag ttcgggggtt
      121 tcgttggcga gcatggaaac ggcgaacaat gcggcatttg ccgcgcctgc ctcgccgatg
      181 gcgaatgtgg cgacgggtac gcctttgggc atttgtacaa tcgataaaag cgaatcttcg
      241 ccgcgcaggt atttgctggg gacgggtacg cccaaaacgg ggacggtggt cttggcggca
      301 accataccgg gtaaatgcgc cgcgccgccc gcacccgcga tgatggcttt gatgccgcgc
      361 gcccgtgcgg tttcggcgta ttggaacatt aaatccgggg tgcggtgtgc ggaaacgacg
      421 cacgcctcat attctacgcc gaactcttca agaaactgcg ctgcctgccg cataacgggc
      481 caatcgctgt tgctgcccat gatgatgccg atttgaatca taaatcctcc ttggtgcgga
      541 tggggtaaaa agcggaaaaa ctatcgtttg cgtacggctg ctgcggcgcg ttttgccgcc
      601 gggctgccgg gataggtctg tatcaggctg cgccaagtcg cccttgcaat gtctttttgc
      661 tgcaacctgt attggcattc gccgattttg aatatggctt cgggtgcggc aggggtgcct
      721 ttgaaacggt tggcgtaacg ccgcccgatt tcgatgacgg attcgcagtt ccccatacgc
      781 accctgcttt gcagcaacag gtacatactg cgttgcgcga tgctgccgcc gtcgcctccg
      841 tccgcgcctt tcaacagggc ggctgcagcg gcgaacctgc cgcttttata gtgtttgagt
      901 gcctgattgt agaggttttg tgcggtttcg acggtatgtg cggatgcgct gccgccttcg
      961 gtattgaggt aatgctcttt caacttgcgg tcgtcgagtt tttggacgta tgccctgctg
     1021 gaagggtgtg ttttcgcatg ctccagtgct ttgactttgc cgtttaaggt ttccacttcg
     1081 ttcgacagcc ggacgattct gccttccaga tagtccaaac ggtcttgcaa ggtcggaacg
     1141 ggatagggaa tagcgtccga actacctgcc tctgcctgcg gttcgagccg catatcctga
     1201 atattgcggg aaacagggga agaacaggcg gcggatacgg acagccaaat gataaaaagc
     1261 ggtaatttgg tcttcattat tttttcagaa gcagggtcaa accgtcgccg acgggcaggg
     1321 tgatggggac aatccgcgta tcgttcggca ggttttgatt aaaatctttg aggatgccga
     1381 cgctgggcgg cgcatcggaa gccgcttcgc gcatcaccct tccgttcaac aaaatattgt
     1441 cgatggcaat gatgccgcct tgccggacaa gcttgaggca acgctcgaaa tattgcggca
     1501 tgggcggttt gtctgcgtct atcagtgcca aatcgtagct tccggcttca ccctgtgcaa
     1561 tcaaatcatc caatgtcagc aatgcgggtt gcaggtgcag gctgatttta tgtgccacac
     1621 cggcctcgtt ccaaacctga cgcgccgtat cggtaaaggt tacattgatg tcgcaggcgg
     1681 taatccgccc gtgttcgggc aacgccaatg caagcgcggt gctgctgtat ccggtaaata
     1741 cgccgatttc cagatatttt tccgcacgga tcagctttgc cagccaaacc aaaaccgccg
     1801 cctgttcgcg cgcaatcgcc attttgccca tacggtgatg cccggtcttc tcacgcagcc
     1861 gcgtcaaaac gggatgttcg ggttcgccga tggcgttcaa atagttttgc aggtccggtg
     1921 caacattgga cagatgggtc gtcatttcgg cgggttcagt cttggtaata ggtataaggt
     1981 tttttcgcta cttttgccgc ctcgaagttt tcctgttctt cgggattgag ttcgacatcc
     2041 cacaaaagcc cccggttttc caaacgctgc tgttccaact caggtttttc ttcaatcagg
     2101 cggttgagga attgtgtggc ttcggattgg tagtgataca tctttgcgct ccaattttac
     2161 gggatacggc gtgattatac tggtattttc caaacgggat aaacggcttt tatcaagaat
     2221 acaggcagaa agataagggg ttttattata gaataaagcg tttttgcaac ggaagcctac
     2281 cttatgccac gcattgccgc cctgcccgac catctcgtca accaaatcgc cgccggcgaa
     2341 gtagtcgaac gccctgccaa cgccttgaaa gaaatcgttg aaaacagtat cgatgcaggc
     2401 gcaacggcga ttgatgtcga gctggacggc ggcggcatcc gcctgattcg cgtcagcgac
     2461 aacggcagcg gtatccatcc ggacgacatc gaactcgcgc tccaccgcca cgccaccagc
     2521 aaaatcaaaa ccttaaatga cttggaacac gtcgccagca tgggctttcg cggcgaaggc
     2581 ttggcaagca tcgcctccgt cagccgcctg accctgacca gccgtcaaga agacagttcg
     2641 cacgcaaccc aagtcaaagc cgaagacggc aaactcagca gccccaccgc cgccgcccac
     2701 cccgtcggca ccaccatcga agccgccgaa ctcttcttca atacccctgc gcggcgcaag
     2761 ttcctcaagt ctgaagccac cgaatacgcc cactgcgcca ctatgctcga acgcctcgcg
     2821 ctggcgcatc cgcacattgc cttctcgctc aaacgcgacg gcaaacaagt gttcaaactc
     2881 cctgcacaaa gcctgcatga acggattgcc gccattgtcg gcgatgattt tcagacggca
     2941 tcattggaaa ttgacagcga caacggcgca ttgcggctct atggcgcgat tgccaaaccg
     3001 actttcgcca aaggtaaaac cgacaaacaa tactgcttcg tcaaccatcg ttttgtccgc
     3061 gacaaagtca tgctccatgc cgtcaagcag gcataccgcg acgtattgca caacgcactg
     3121 acgcctgctt tcgtcctctt tctcgacctg ccgcccgaag ccgtggatgt caacgtccac
     3181 ccgaccaaaa ccgaaatccg cttccgcgac agtcagcagg tgcaccaact tgtgttccac
     3241 acgctcaaca aagcccttgc cgacacacgc gccgacctga ccgaaagcgt cagcaacgca
     3301 ggcgaagtgt tgcatgacat taccggcgtt acgcctgcac caatgccgtc tgaaaacgac
     3361 agcgaaaatc tgtttaatcg cgcatccgac tacccgacag gcaacaaacc cgatacgcgc
     3421 aatgcctttg gtgcatcagg caaaaccgcg cctatgccct atcagtccgc atatgcgccg
     3481 caacaacgca gcctgtccct gcgcgaaagc cgcgcggcaa tgaacaccta tgccgaactc
     3541 tacaaaaaaa ccgacgatgc cgaccttgag ttaagccgat tcgagcaggc acgtttcggc
     3601 aatatgccgt ctgaaacgcc tgctccccaa acagatacgc cgctttcaga cggcatcccg
     3661 tccccatccg aactgccgcc gctcggtttc gccattgccc aattgctagg catctacatc
     3721 cttgcccaag ccgaagacag cctgctgctc atcgatatgc acgccgctgc cgaacgcgtc
     3781 aactacgaga aaatgaaacg ccaacggcag gaaaacggca agctgcaaag ccaacgcctg
     3841 cttattcccg taacctttgc cgcgtcccac gaagaatgcg ccgccctcgc cgattatgcc
     3901 gaaacgctgg caggcttcgg cttggaattg tccgatatgg gcggcaacac cctcgccgtc
     3961 cgcgccgttc ccgccatgct cggcaaagcc gatgtcgtct ccctcgccaa agacgtatta
     4021 aacgaactcg cccaagtcgg cagcagccaa accatcgagg aacacgaaaa ccgcatcctc
     4081 gccacgatgt cctgccacgg ctcgatccgc gccggccgcc ggcttaccct gcccgaaatg
     4141 aatgcgctcc tgcgcgatat ggaaaacacg ccgcgcagca accagtgcaa ccacggccgt
     4201 ccgacttggg tcaaactgac tttgaaagaa ttggacgcac tgttcttgcg cggacaataa
     4261 gccgaaagtg ctagaatacg ccgcccgaga ccgccgttca gacggcattc cgacgcaccg
     4321 acagaaacat cacgaccgaa accaagagaa aaatatggcc tatcaagttc tcgcccgaaa
     4381 atggcggccc aaaacctttt ccgacctagt cggtcaggaa cacgtcgtca aagccctgca
     4441 aaatgccttg gacgaaggca ggctgcacca cgcctacctg ctgaccggta cgcgcggcgt
     4501 gggcaaaacc accatcgccc gcatccttgc caaaagcctc aactgcgaaa acgcgcaaca
     4561 cggcgaacct tgcggcgtat gcgaaagctg tacgcagatc gatgccggac gctatgtcga
     4621 cctgctcgaa atcgacgccg cctccaacac aggcatcgac aacatccgcg aagtcttgga
     4681 aaacgcccaa tacgcgccga ccgccggcaa atacaaagtc tatatcatcg acgaagtgca
     4741 tatgctttcc aaaagcgcgt tcaacgctat gctcaaaacg ctggaagagc cgcccgaaca
     4801 cgtcaaattc atccttgcca cgaccgatcc gcacaaagtc cccgttaccg tattaagccg
     4861 ctgcctgcaa ttcgtcttac gcaatatgac cgcgcagcag gttgccgacc accttgccca
     4921 cgtcctcgac agcgaaaaaa tcgcctacgc cccccccgcc ctgcaacttt tgggacgcgc
     4981 cgccgccgga tcgatgcgcg atgccttgag cctgctcgac caagccatcg ccatgggttc
     5041 gggcagcgtt gccgaacaag acgtccgcca aatgatcggt gcggtcgata aacaatacct
     5101 gtacgaactg ctgacaggca tcgtcaacca agacggcgaa gccctgctgg caaaagcaca
     5161 ggaaatggct gcgtgtgccg tcggctttga caacgccttg ggcgaacttg ccatactgct
     5221 gcaacacctc gccctgatac aggcagtgcc gaatgccttg gcgcacgacg accccgattc
     5281 cgatattttg caccgcctcg cccaaaccat aagcggcgaa caaatccagc tttactacca
     5341 aatcgccgtc cacggcaaac gcgacctgag cctcgccccc gacgaatacg ccggctttat
     5401 gatgaccctg ctgcgtatgc tggcgttcgc acccttggcg gcaacatcgt gtgatgcaaa
     5461 cgccgtgatt gaaaataccg aacttcaatc cccatcggca caaaccgccg aaaaggaaac
     5521 cgccgcaaaa aagccccaac cgcgccctga aacggaaacc gcccaaacat ccgttcagac
     5581 ggcatccgca gcggcaatgc cgtctgaaag caaaactgcc gaacccgttt ccaatcaaga
     5641 aaacaacgat gttccgcctt gggaagacgc gccggacgaa gcccaaaccg cagccggcac
     5701 ggcgcaaacg tcggcaaaaa gcattcagac ggcatccgaa gccgaaacgc cgcccgaaaa
     5761 ccaagtttcc aagaacaagg cagccgacaa cgaaaccaat gcccccttgt ccgaaacgcc
     5821 gtctgaaaac cccattcagg caacaccgaa taatgaagcc gttgaaacgg aaacatttgc
     5881 acacgaagcc cctgcagaac ctttctacgg ttacggcttt ccggataatg actgccccgt
     5941 agaagacaac gcagaaatcc cgccgcccga ttgggaacac gccgcccctg ccgataccgc
     6001 aggcggaggc gcggacgaag aagcagaagc gggcggcatc ggcggaaaca acacgccgtc
     6061 cgccccgccg cccgaatttt ccaccgaaaa ctgggcagcc atcgtccggc atttcgcccg
     6121 caaactcggc gcggcgcaaa tgccggcgca acactccgcg tggacggaat accatcccga
     6181 caccggcctg atggttttgg cgatgaccgc cgaagcacgc gccaccgccg acaaaaaacg
     6241 cctcgacaaa atccgcgaca cccttgccca agcctacggg ctgcaactca ccctgcaaac
     6301 ccaagactgg caggacgaag ccggcagaga aacccccgca atgcaggaca agcgcgtcca
     6361 aatcgaagac aggcaaaaag cacaagcatt gctcgaagcc gaccccgccg cacaaaaaat
     6421 cctccaagca ttcggcgcgc aatggcagcc cgaatcactg gaattggcgg caaaccggcc
     6481 ataaacagat ataatgccgc ccgaaccctt cggacggcat tgccgtttcc ctcattcatt
     6541 caaacacaaa caggagtatt cagtatgttc ggaaaagccg gattaggcgg cctgatgaaa
     6601 caggcgcagc aaatgcagga aaatatgaaa aaagcgcaag ccaaacttgc cgaaaccgaa
     6661 atcgaaggcg aagcaggcaa cggcttggtc aaaatcacaa tgacctgcgc gcacgaagta
     6721 cgcaaaatcg acatcagccc cgatttgatt caagaagccg ccgacgacaa agaaatgctc
     6781 gaagacctca tcctcgccgc cctcaaatcc gcccgtgaca aagccgaaga aaccgcaaac
     6841 aaaacaatgg gcgcattcac gcaaggtcta ccccccggag tgggcgactt cttccgctga
     6901 tacccaaccg tcattcccac gcaggcggga atctagaacg tagaatctaa gaaaccgttt
     6961 tactcgataa atttccgtgc cgacgggtct agattcccgc gttcgcggga atgacggcat
     7021 attttttgca tttgatataa agggtcgttt gaattttgtt cagcaagtgc aaagtgttgc
     7081 acataaaagg gcgcaggata gaggcaaagc gggcgtaggt cgggctgtag caactgtatt
     7141 tttcaccccg tcgggcaaaa atatagtgga ttaacaaaaa ccagtacggc gttgcctcgc
     7201 cttagctcaa agagaacgat tctctaaggt
//
LOCUS       DAWEYF010000100         7214 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.100, whole genome shotgun sequence.
ACCESSION   DAWEYF010000100 DAWEYF010000000
VERSION     DAWEYF010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7214
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.100"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(16..771)
                     /locus_tag="WGN93_001442"
     CDS             complement(16..771)
                     /locus_tag="WGN93_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ0227343.1"
                     /translation="MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPRAGE
                     LKQPVTNVSWFAANAYCTAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(949..2127)
                     /gene="nirK"
                     /locus_tag="WGN93_001443"
     CDS             complement(949..2127)
                     /gene="nirK"
                     /locus_tag="WGN93_001443"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HEZ0227344.1"
                     /translation="MKRQALAAIIASMFALAACGGEQAAQAPAETPAASAEAASSAAQ
                     AAAETPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYHYWT
                     FDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTST
                     FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKG
                     KKGAQGLQPFDMDKAVAEQPEYVVFNGHVGSIAGDNALKAKAGETVRMYVGNGGPNLV
                     SSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRA
                     FNKGALGQLKVEGAENPEIMTQKLSDTAYAGSGAASAPAASAPAASAPAASASEKSVY
                     "
     gene            2509..4764
                     /locus_tag="WGN93_001444"
     CDS             2509..4764
                     /locus_tag="WGN93_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ0227345.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRVKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSKEAREKLFDFFFWTSWSASTNRPGEVFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEIPAEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IVISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4943..5476
                     /locus_tag="WGN93_001445"
     CDS             4943..5476
                     /locus_tag="WGN93_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ0227346.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRDKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5539..6723)
                     /locus_tag="WGN93_001446"
     CDS             complement(5539..6723)
                     /locus_tag="WGN93_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ0227347.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNVGFTVTNQQAGSRRF
                     QRFAGTDTQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILGKQRAIVFGNFRMGNIRDVYDSSYDFSTVVNHISRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNGSYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6763..7167)
                     /locus_tag="WGN93_001447"
     CDS             complement(6763..7167)
                     /locus_tag="WGN93_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ0227348.1"
                     /translation="MTAQPCPICTAQNEDVLLQTPKLRVITVHNDSGSPAFCRVIWHE
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1598 a         1763 c         2026 g         1827 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aagttgtgca agacatattt
       61 ggattgcagg ctggtacgga tgccgtagcg gaggaaggcg gcatagttgg acgagtcgct
      121 cgacccgata gacgcgccgc tgcaaaacat ttgcgcgttg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagcccg tgcatatcat aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggcctttc cgtccgccgt cggcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cggtgcaata
      421 ggcgttggcg gcaaaccagg aaacattggt taccggctgt tttaattcgc ctgccctggg
      481 tgcgtagctg cggctgccgt ttttcatcca atgcttcaga taagcgggtt ctgcctgttt
      541 ggaaccgatc ctgccttttt gccattgggg gtggctgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgagtgccg gcgagtgccg caccgaggaa aaataaccgg acgtacttca taaagcctcc
      781 tgacaggcgg ttagcattga tttttcagac ggcattttaa acgaaaagct gcgaatgccg
      841 tctgaagaat caatcttccg aaaggaaaga ttggttgtta aaaaaccact gccgtgcgta
      901 atgaagtacg gcggcagtgg tttgtcccgc taatgacggg tatccggttt aataaacgct
      961 tttttcggat gcagaggctg ccggggcaga agcagccggt gcggaagcag caggggcaga
     1021 agccgcgccg ctgccggcgt aagcggtatc actcaatttt tgagtcataa tttcagggtt
     1081 ttccgcaccc tctactttca attggcccaa cgcgcctttg ttgaatgcgc ggaagatgga
     1141 gtggtcgacc aaagtgtagc tgcccgggat gtcgactttg aattcgacaa tggcggagcc
     1201 tccggcagga acgatggtgc tttgtacgtt ttcgttaatc agcttgccgc cttcaacata
     1261 aactttgtcg aagatttcgc cgatgacgtg gaaggaagac accaggttcg gaccgccgtt
     1321 accgacgtac atacgcacgg tttcgcctgc tttggctttc agcgcattat cgccggcgat
     1381 agaacctaca tgaccgttga atacgacgta ttcaggctgt tcggcaacgg ctttgtccat
     1441 gtcgaacggt tgcaggcctt gcgcgccttt tttgcctttg gtgtagaagt cgccttgaac
     1501 gatgtagaac tctttatcca ctttcggcag gccttcttta ggctcgacca aaatcagacc
     1561 gtacataccg ttggcgatgt gcataccgac cggcgcgacg gcgcagtggt agatgtacag
     1621 gcccggttgc agggctttga agctgaatgt ggaagtacgg cccggggcgg taaaggtcgc
     1681 ggctgcaccg ccgccctgac cggttgcggc gtggaagtcg acgttgtgcg gaacggtaga
     1741 agacgggttg ttggagaatt cgacttctac agtatcgcct tcgcgtacgc ggatcatgcg
     1801 gcccggaacg tcgccgtcaa atgtccagta gtggtattcc accccgtcgt ccattttcat
     1861 ggttttttcg acggtttcca ttttcacgcg gactttggca ggatagtcgc ggtcgattgc
     1921 gggaggtact tcgggagcgt gggtggtaac cgcatcgatg acgggcagtt cgcctgcagg
     1981 cgtttcggcg gcagcttgtg cggcggaact tgcggcttct gcggaagcgg caggggtttc
     2041 ggcaggagct tgagcagctt gttcgccacc gcaggcggct aaagcaaaca tagaagcgat
     2101 aattgcagct aaggcttggc gtttcatgat gttttccttt tgtaagaaaa gtaaattgtc
     2161 ctgaaaggat tggttaagaa cttggtgtga ttatgcggtt gccccattgc gggcattttg
     2221 atttaagtca aataattcat aaaatatgaa cttaaaatga cacttctaat actttataac
     2281 tactaaaaat tacaatgaat aggctgattt gccagggctt cggcagagca ggcaaaggca
     2341 gggcaatttc cgagtaaaga ataatgatag ttattatcat atatgtattt gttttatatg
     2401 tgagtttgtt tgaacaaatg tttatttgcg cggtaaaccg tgctacaatc tttaacattc
     2461 atattctgtg aattttaaac aactgcttta ttaaaaggag ctctcaaaat gggacagtac
     2521 aagaagctgt ggtacttgct gtttgccgtt ctggcagtat gctttaccat tcttggctat
     2581 atgggcagcg aggtttataa gaaagccccg ccttaccccg aacaggtcgt ttccgcatca
     2641 ggcaaggtct tgatgacgaa agacgatatt ttggcaggtc agtctgcgtg gcagagtacc
     2701 ggcggtatgg aagtcggttc gattctgggc cacggcgcat atcaggctcc ggactggacg
     2761 gccgactggc tgcatcgtga gttgtccgct tggttggatt tgaccgcgca acagacttac
     2821 ggcaaaaaat tcgacgaggt ttcccccgaa gaacaagccg ttctgaaaac ccgcctggct
     2881 gacgaatacc gcaaccaaag ccgcgtgaag gaagacggtt ctgtggtcat cagtgatacg
     2941 cgcgtgaaag ccatcgaaag catcctgccg tactaccacg gtgtttacgg cgacgatccc
     3001 gcactgcaaa ccacccgcga acactttgca atgaaaaaca acacattgcc aagcaaagaa
     3061 gcgcgtgaaa aactgttcga cttcttcttc tggacttctt ggtctgcttc gaccaaccgt
     3121 cccggcgagg tctttaccta caccaacaac tggccgcatg agcctttaat caacaacgta
     3181 ccgactactg aaaactatat gtggtcgttt accagcgttg tattgctctt gatgggcatc
     3241 ggtttgttga tgtggggtta ttccttcctg accaaacacg aggaagtgga aatcccggct
     3301 gaagatccga tttccaaaat ccaactgacc ccttcgcaaa aagcattggg caaatacgtc
     3361 ttcctgacgg ttgccctgtt tgtggtacaa gtattgctgg gcggcctgac cgcgcactac
     3421 accgtcgaag gtcagggttt ctacggcatc gatgaggcgt tgggctttga aatgtccgac
     3481 tggtttccct acgccctgac ccgtacttgg cacatccaat ccgccatctt ctggattgca
     3541 accggctttt tgacggcagg tttgttcctc gcgccgattg tcaacggcgg taaagatccc
     3601 aagttccaac gtgccggcgt aaacttcctc tatatcgccc tcttcatcgt ggtcggcggt
     3661 tcttacgcgg gcaacttctt cgcgttgacg cacatccttc ccccggaatt taacttctgg
     3721 ttcggacacc aaggttacga atacctcgat ttgggacgtt tctggcaact ccttttgatg
     3781 gtcggactgc tgttatggct gttcctgatg ttgcgttgca cggtttccgc ctttaaagaa
     3841 aaaggcgtgg acaaaaacct gttggcaatc tttgtcgctt ctatggtcgg cgtgggcgtg
     3901 ttctacgcgc cgggcctgtt ctatggtgaa aaatccccga ttgccgttat ggaatactgg
     3961 cgttggtggg tggttcacct gtgggtggaa ggcttctttg aagtatttgc cactgccgcc
     4021 tttgcctttg tcttctacaa tatgggcttt gtccgccgca gtaccgccac tgcctccact
     4081 ttggccgctg ccgccatctt tatgttgggc ggcgttccgg gcacgctgca ccacctgtac
     4141 ttctccggct ctacctccgc ctctatggca atcggcgcct gcttctccgc tttggaagtc
     4201 gtgccgctgg tgttgctggg ccgtgaagca tacgagcatt ggtcttacca acacctgtcc
     4261 gactgggcaa aacgcctgcg ttggccgctg atgtgcttcg tggcagtcgc cttttggaat
     4321 atgatcggtg ccggcgtatt cggcttcctg atcaatccgc cgatttccct gttctatatt
     4381 caaggtttga acacttctgc cgttcacgcg cacgccgcct tgttcggtgt gtacggtttc
     4441 ttggcattgg gcttcgtatt gttggttgcc cgttatttga aaccgaacgc gcagtttgat
     4501 gacaaactga tgacttgggg cttctggctg ctcaacggcg gcttggtcgg tatgattgtt
     4561 atcagcctgc tgcctgtcgg cgcgattcag gcatacgcct ccatcacgca cggtctgtgg
     4621 tatgcccgca gcgaagagtt cctgcaaatg gaaatcctcg ataccttgcg ttgggtacgt
     4681 acggcagctg acttgatctt tatcggcggt gcaatctgcg ttgccatcca agccactaaa
     4741 atcgtattcg gccgcgacaa ataagttttg cggtatgaaa tgagcaactg cacccgtttt
     4801 cgggtgcagt tttttattgc ggattgggac gggaatggaa aaggatgtgg attttttatt
     4861 ttaatcggct atacaattgc tgctttcatg ccgtctgaag cacgtttcag atggcatcgg
     4921 tttacatcag ataaggataa aaatgggtat ttacgatttt caaatgaaag atgcagaagg
     4981 caatgcggtt gatttgtcag gctatcgcga caaggttctg ctgattgtca acacggcaac
     5041 gcgttgcggt ctgaccccgc aatacgaggc tttgcagaag ctgtatgcac aatataccgc
     5101 agaaggcttg gagattttgg attttccgtg caaccagttc cgcgaacagg ctcccgaaag
     5161 cagcggagaa attgcccaag tgtgtatgat gaagtttggc acgaagttta agattttcga
     5221 caaaatcgaa gtcaatggag caaataccgc gcccttgtat gcctacctga aatccgtcaa
     5281 accgcaagat aaaggcaatc atctgtttaa agatttcgtg ttgaagctcg cagctttggg
     5341 agagaagcgc gacgaaggcg acatcaaatg gaactttacc aaattcctcg tcaaccgcga
     5401 cggcgaagtg gtcgagcgtt ttgcgcctag tgttacgccc gaagaaatcg aagccgatat
     5461 tcgggcattg ctgtaatctg ccgccgtctt gggaaatgcc gtctgaaggc ttcagacggc
     5521 atttgtccgt ttgcgggttt attccgagat atcggcaaca ccgctttcgg ggaagatggg
     5581 caaatccggc ggtgggagca aggtatccaa agtcagggcg gacgcatcga gtgtggggta
     5641 gccttcaaac gcgaccgaat aactgccgtt tccgttcata cggattcggg cgtgcgcgcc
     5701 cagagggaaa gtaattttgt cggcaatatg tccgaacggg aaacctgtca gcacaggaat
     5761 ttttgccgta cgagaaatat ggttgaccac ggtagaaaaa tcataagacg aatcgtatac
     5821 atcgcggata ttgcccatac ggaaattgcc gaacacgatg gcgcgttgtt tgcccaaaat
     5881 acccgaaaga tacagcgtat tgagcatacg ttcgatgcgg tagggctgtt cgccgacatc
     5941 ttcgaggaac aaaatgccgc cgtcgatgtc gggcatataa ggcgtgccgg cgagcgaggc
     6001 gaggacgctt aagttgccgc cccacaatat gccttcggtt tcgacatcgg cgcgttggat
     6061 ataaggaaca tcaacggtca ggcggttttg ggttgcaccc ttgataaagg catccatcgt
     6121 aaacgcaccg ggggcgggtt tgccaaaatc gctataagcc atcgggccgg caaaactcat
     6181 catattgcct tttgccaaca atgccagctg gacggcgcat acgtcgctga atccgaaaaa
     6241 cagcgtgccg tgttcgcgca tccttgcgcc gagcgaagca aaatcgatat gcggcagaat
     6301 ccgcgccgca ccgtaaccgc cgcgcaagcc catcagcact ttaggcgtgg cgacgcggcc
     6361 ggaagcgacc tcttggaaat cggcggcacg ttgcgtgtcc gtgccggcaa accgttggaa
     6421 acggcggctg cccgcctgtt ggttggttac ggtaaaaccg acattgtaaa ggcgggttaa
     6481 ggctgtgttg acgcggttgg tgtcttcggc aaatcctgac gaagcgacaa cgcgcagaag
     6541 gttgccgtcc gaactttgac ggcgtggcgt ttggagaggc acggttcggg ctttcacaac
     6601 ggaatgggaa gagggaaggg gcggaacgga tgtggcggat gtgccgcaag cctgaagcag
     6661 ccccgcgccg gcagcggcgg tgcaggtttt cagaaaacgg cggcgggagg tcggttcggt
     6721 cataatttcc ctttcatacg gtttcagacg gcattggcgg gcttaaagca gctttttaag
     6781 ctgttccgtc caatcttgcg gcagggtcat accgtgtttc cggacggggt ttgcccaaat
     6841 cggcgcgggg aaagacgcat cgttttcaaa gcgggcgata atatgccaat gcaggtgcgg
     6901 cacgacattg cccaagctgg cgaggttgat ttttgccggc cggaacactt ggcgcatagc
     6961 ggcttcgact ttgtacacca tttccatcaa ttcgccgcgt tccgctgccg aaaggtcggt
     7021 catttcggcg atgtgttcat gccagataac acggcagaat gcaggcgaac cgctgtcgtt
     7081 atggacggtg atgacgcgca gcttgggggt ttgcagcaaa acgtcttcat tttgcgccgt
     7141 gcagatgggg cagggttggg cggtcatttt tccttattcc tgaaagtgtt taaaaaacgg
     7201 taggataatt tctg
//
LOCUS       DAWEYF010000101         7201 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.101, whole genome shotgun sequence.
ACCESSION   DAWEYF010000101 DAWEYF010000000
VERSION     DAWEYF010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7201
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.101"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(86..955)
                     /locus_tag="WGN93_001448"
     CDS             complement(86..955)
                     /locus_tag="WGN93_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ0227349.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            complement(1050..1967)
                     /gene="hisB"
                     /locus_tag="WGN93_001449"
     CDS             complement(1050..1967)
                     /gene="hisB"
                     /locus_tag="WGN93_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ0227350.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(1964..3061)
                     /locus_tag="WGN93_001450"
     CDS             complement(1964..3061)
                     /locus_tag="WGN93_001450"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ0227351.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            complement(3107..4396)
                     /gene="hisD"
                     /locus_tag="WGN93_001451"
     CDS             complement(3107..4396)
                     /gene="hisD"
                     /locus_tag="WGN93_001451"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ0227352.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(4393..5292)
                     /locus_tag="WGN93_001452"
     CDS             complement(4393..5292)
                     /locus_tag="WGN93_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ0227353.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            complement(5396..6049)
                     /locus_tag="WGN93_001453"
     CDS             complement(5396..6049)
                     /locus_tag="WGN93_001453"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ0227354.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            complement(6128..6781)
                     /locus_tag="WGN93_001454"
     CDS             complement(6128..6781)
                     /locus_tag="WGN93_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ0227355.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            7058..7142
                     /locus_tag="WGN93_001455"
     tRNA            7058..7142
                     /locus_tag="WGN93_001455"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7092..7094,aa:Leu,seq:caa)
BASE COUNT         1476 a         1717 c         2125 g         1883 t
ORIGIN      
        1 tcataatcgg gactgatttt aagcgtgggg tgataaaaat gccgtctgaa atatgttcag
       61 acggcattgt gtttggaaaa ggcaatcagt gttctgccaa tttcaggtaa acgccggaaa
      121 cgtcctgttc gccgtagccg gcttcgactg ctttgcggta gctggcagca acggtttcga
      181 cggcgggcag ggtgttgcct gcctgttcaa gctctttgac ggcgaggttg aggtctttgg
      241 aggcgtgttt gagggcgaag gcgggtggga attcgcggtt tgcccacagg gattttttgg
      301 tttggaacat gggcgagtcc attgccgagc cgccgatggc ttcgacgatg gtgtcggtat
      361 cgatgccgaa ctgccgcgcc atcagcatgg cttcgctgta agcttcgccg aaaatgccca
      421 agagcgagtt caagacgagt ttcgcgcccg aacctttgcc gacatcgccg aaatggaagg
      481 tttttttgcc gacgagggaa aatatttttt gcagcgggtt taaaacggct tcgctgccgc
      541 cgaacagaat cagcagcgtg ccgttggtgg cgggcccgac cgatccggaa acgggtgctt
      601 cggcaaactg tccgcctgcg gcttcgacaa gtgctttgac ggcgaggttt tcggtcgggg
      661 agatggtgct catgttgacg atgattttgc cggccaatcc gtcgcggact ccgttcagga
      721 tgtcgcacac ggcggcatag tcggaaacca tcaggaaaat gacgggatag tcgcggacga
      781 gttcggcggt gttgccgtaa acttttgcgc ctttggcgga gatgggggca gttttgtcgg
      841 gcgagcggtt gtatacgccg acttcgatgc cgccgtccaa gagccgcgtt accataggca
      901 gacccatttg ccctaagcct atccagccga tttgtgtgta ttcgtttgcg gacatgatgt
      961 ttactccttt tctgtttgta gtgtagtgta atcttatctg ttccgatacc gtctgaaaag
     1021 cctgcgggtg tttcagacgg tatggttttt tatgcggtca gcgtgccttt ggtcgagggg
     1081 gtctgtcctg ccatgcgcgg gtcgtgttcg actgccatac gcagggcgcg cccgaaggct
     1141 ttgaatacgg tttccgcctg atggtgggcg tttttgccgc tgaggttgtc gatgtgcagg
     1201 gtcatcatac tgtggttgac gatgccgtgg aaaaattctt caaacaaatc gacatcgaaa
     1261 cgtccgatta gtgcgcgggt aaattcgatg ttgtacacga gtccggggcg gccggaaagg
     1321 tcgatgacga cgcggctgag ggcttcgtcg agcgggacgt aggaatgtcc gtaacggcgg
     1381 atgccttttt tgtcgccgag tgcctgccgg attgcttgtc cgagtgtgat gccgatgtct
     1441 tcggcggtgt ggtggtcgtc gatgtgcagg tcgcctttgc agctgatgtc gatgtcaatc
     1501 atgccgtggc gggcgatttg atcgatcatg tgttcgagga agggtacgcc ggtatccagc
     1561 ctgcttttgc cgctgccgtc gaggttgatg gagacggtga tttgggtttc gcaggtattg
     1621 cggttgacgg taacgctgcg gcagccggca gcagatgcgg tttcggcaat ttgggtttcg
     1681 gcagttccgg tgctttctgc ggcggtttcg gggacagtgc gttcgcggtg ttttctgtcg
     1741 agccagcctt tgggtttgcc ggtgtgtttt tcgagttttg ccatcaggct gggacggatg
     1801 ccgcgtgcat ctgggtcttc tgcctgcttt tcaaggcgtt gtttgagttt gtagagtgcg
     1861 acgggggtac ggtagccgca gagtttggcg agcttggaca gcgaacctgc ttcttgggcg
     1921 agggtcagaa agttgtgcag ttggcgttgt gttttagtca aattcatagg aaatccgttg
     1981 gttggcagta aagttggcga atgatgttga gaacggcatc gttttgtgcg gggctgccta
     2041 cggtaatgcg caggcagtgt tccaaaagcg ggtgcgcgcc atgcagtttt ttaaccaaga
     2101 tgcggttttg tttgagcgtg tcaaacaaca aatcggcatc gggtacgcgt atggtaatga
     2161 agtttgcctg acttggaaag gtgttcagac ggcatatttt gcccaattcg gcgaacatcc
     2221 gttcgcgttc gtttttcagg ctgtcgatgt tggcagagat gatgccgtag tgttgcaggg
     2281 cgagtttggc ggtggtcagg ctcagttggt tcatattgta gggcggcagg attttttgca
     2341 gttcgccgat gacttcggga cagcctgccg catagccgat acgcagtccg gcaaaaccga
     2401 ttttgctgac ggtacgcatg acgatgaggt tgggaatgct gcccgcctgc ggcaggaagc
     2461 tgtcgccgtt gaatgcgccg taggcttcgt cgacgacgac gatgccgtct gaagcttcga
     2521 tgacggcttc gatttcggca cgcgtgaaac atacgccggt ggggttgttg gggtaggcga
     2581 taaaggtcag ggcagggcgg tgcttcctga cggcttcgag gacggcgggc aggttgaggg
     2641 tgaaatctcc gttcagtgga acgccgacat aatccatgcc gtacagcgcg gcgttgtggc
     2701 ggtacatgac gaaactgggt tcggctgcca acattgccgc gcccggtttg gcggtcagca
     2761 tcgtgatgaa ctgtatcagc tcgtccgagc cgttgcccag cgcgatgtcg gcgcagtcgg
     2821 gaatgtcgaa cgccgaacgt aatgcttcct gtaaaccgct gccggaggga ttggggtaaa
     2881 gatggatggg cgcggcggca agccgtgcct gccattcctg caacagcgtt tcatgtccgg
     2941 caaaagggtg gacgggactt tccatcgaat cgagtttggc aaagccgggc ggaacgtcgg
     3001 caatctgata tgccgacata gcttgtatgt cgtcgcggat gaaggagcgg acggatttca
     3061 tcgtgtttcc ttaatggttg gaatatgcct gtacgccgtt tcggcattat ttcatacgga
     3121 actctgccgc gcgggcgtgg gcggtcaggc tttcgccgtg tgccagcacg ctggcggttt
     3181 cgcctaattt ttgcgcgccc tgttccgaaa cctgaatcag gctggagcgt ttttggaaat
     3241 catatgtccc caaaggcgag gaaaagcggg cggttcggct ggtgggcaat acatggtttg
     3301 gaccggcgca gtagtcgccg aggctttcgc cggtgtagcg tcccatgaaa atcgcaccgg
     3361 cgtggcggat ttttttcgcc cattcctgcg gattttcgac tgacagttcc aagtgttcgg
     3421 gggaaatgta gttggcgatt tcgcaggctt cgtccaagtc tttggcgagt atcatcgcgc
     3481 ccctgttgcc gagcgaggct tcgatgatgt cgcggcgcgg catagtttcg atcaggcggt
     3541 ccatagcggc ttctacttcg tcgagatacg cttgcgacgt gccgatgagg atggcttggg
     3601 caatttcgtc gtgttcggcc tggctgaaca aatccatcgc cacccaatcg gcaggtgtcg
     3661 tgccgtcggc gatgaccagg atttcagacg gccccgccac catgtcgatg ccgaccacgc
     3721 cgaacacgcg gcgtttggcg gcggcgacga aggcgttgcc cggaccggtg attttatcga
     3781 cttgggggat ggtttccgtg ccgtaggcga gggcggcaac cgcctgcgcg ccgccgacgg
     3841 tgaagacttt ggttacgccg gcgacgtatg cggcggcaag tacgatgtcg ttgcgttcgc
     3901 cttttggtgt cggcacgacc atgatgattt ctttcacacc tgcgacgtgg gcgggcatgg
     3961 cgttcatgat gacggaactc ggatacgccg ccttgccgcc ggggacgtaa atgccgacgc
     4021 ggtcaagcgg tgtgatttgt tgtcccaaca gcgtgccgtc ttcatcggtg tagctccacg
     4081 attccatttt ttggcgttgg tggtagcttt cgacacggcg ggcggcggtc tgcaatgccg
     4141 tctgaacgtc gttcggaatg cgctcgaacg ccgcgttcaa atcggcttgc gtgagtatta
     4201 aatcatcgat gcttttagcg tttgtctgat cgaatttgtt ggtgtattca atcaaagccg
     4261 catcgccgcg cttttgcacg tcggcgcaaa tgtcggcgac gatgcgttcg gtttcggggt
     4321 tttgcgcggt ttcaaaagcc agcagggctt tgagtccggc ttggaaatcg ggcgattggg
     4381 tgttgagttt tttcatgatt tggttttttc cttttttatt tttggattgg gggtcgtctg
     4441 aatattctct tgttcagttt ctgtctctgt tttgggtctg atatacgctt tttctccccc
     4501 gctaccaaac ttcaattcgg gcaggcattt ttgttgcaga ccgagtttgg ctaatacctc
     4561 ttcgctacga gaggtagtgc ggaaacggta acgggattgt tttctaccgt ttttggtttc
     4621 ctcaaccatt gtttcaaaac cgtccacttc gtatgcactg acaacagcgt tttgcagacc
     4681 ggtgtgaacg ccgataacgt atttcacttt tgaagcaaca tctttaccga taacccagtt
     4741 gcccaacgta cgcgatttga ggttggcatc gtcttggttg tcgaaaaggt agtctaattc
     4801 ttcgtcagta tctaaatcga aagcattgtg gattttgatg gcgagaatca gcccgtcggg
     4861 gttaatctcg ttaagtggga gagaagagaa tccaaagcgg cgatctagtt cttctacgct
     4921 aataccaccc ggaccatgcc cggcaatttt atttttgagt tttttaccca agacagattt
     4981 aacaaaatga attaaggcag attcggcggc gagtgcttcg acttcagtca gatgatagct
     5041 gatgatatag cgaccgagtt tcttgcattt ggagatggct ttgagtttcc gatcgataat
     5101 ctcgccggag actgggtctt gtgaacgact agcaacccat tcatgctcga agatacgatt
     5161 accgcagcct ttgccgatgt agaggatttt gtcttttttc aggtcggtca gacaatagac
     5221 ataaaaccga cgctcgccgt tattcaaaac ggaaagggtt gaatctgaga atttttttat
     5281 ttttgcaacc attttaactt ctcctataca gtttactgcc ggtgatattt tcagacgacc
     5341 tgtcggcggg aacggatagg gtcgtctgaa aacgcatctt tattcaaatg gatgcttact
     5401 tcgccttcac tgcgccgccg aacgcctgaa taatcggctc cagcagcgcg tatttcgttt
     5461 tcaaagcagc cttgttgacc accaggcggc tggaaatgtc gacgatgtgt tcgactgctt
     5521 ccaagccgtt tgccttcaag gtgttgcccg tcgaaaccaa gtccacaatc gcatcgctca
     5581 agccgaccag cggcgcaagt tccatcgagc cgtacagttt gataatgtcc acatggacac
     5641 ccttgccggc aaaatgagat gccgcgattt caggatactt cgtggcaatc ttcagacggc
     5701 atccgggttg cgaagctgct tcgtaatcaa accctttacg cacagcaacc atcatgcggc
     5761 acttggcaat ctccaaatcc aaaggccggt aaagccccgt gccgccgtgt tcgatcagca
     5821 cgtctttgcc cgcaatgccg aagtccgccg cgccgtagcg gacataagtc ggcacatcgg
     5881 ttgcgcggac aatgacaagg cggatgtttt catggttcgt cccgataatc agcttgcgcg
     5941 atttttcagg ctcttcagtc ggaacaatgc cggcagcggc aagcagcggc agcgtctcct
     6001 caaaaatgcg ccccttggat aaggcgatgg tcaaagcatt atcctgcatg gtgtggatgt
     6061 cctttgtcgg ttgaaacaat aatgccgtct gaataggcgc cgacggtgca gacggcatac
     6121 ggttttatca gagcagagtc cttacatcgg cagcaatcgt ttccggctcg cttccgtaag
     6181 gcgagaaaat ggcaacctca ccgtttttgt cgatgagata cgcaccggaa gagtggtcga
     6241 ccaaatagtt ttcgctgtcg tctttttgat tgactttggc agaaaccacg cggtattgct
     6301 gcttgatgac cggcaggttt tggtcgcccg ttgccgtcag accgataaag tccggattga
     6361 actgtttggc atacttgccg atgatttcag gcgtgtcgcg ttccggatcg atgctgacga
     6421 acaccacttt cacgtcctta gcctgcccgc ccaactgctt caacgtgtcg ctgtacgtca
     6481 aaagctctgt cgggcagaca tcgggacagt gcgtaaagcc gaaagacaga atcacgacct
     6541 tgcctttcaa atcgctcagg ctgaaaggct tgccttcgcc gtcggtcagc gtgaaatcgc
     6601 cgccgatgtc ttccttacgc atatccgtac cgcgcgtttg cggctttgcc gcattttccg
     6661 cagctgacgc ggatgcactt gaagaagcgg cttgcgccgc actgttgtct tgaggtttgc
     6721 aggcggcaag cgcggcaagt acgaaaacgc ccggcaaaaa ggaacgcggt acggaaaaca
     6781 tgacaatctc ccaagaataa atagcaaaac ctgattcgta cggaatttga atatttccat
     6841 cttaacgcgt ttggcagatt taatgtagta tttttttacg ttgtttgcac ggcaggaatt
     6901 gccgaatcat acagaatctt tggagcggaa agaacagtaa gattaaaata ataaaaattc
     6961 tatttaaaat caaaaataaa ataaaaacag ataaaataat ttcaaaaaaa aggtttacag
     7021 aatttcaaaa gccattataa tgacgacttc ttcaccagcc caggtggcga aattggtaga
     7081 cgcaggggac tcaaaatccc ccgccgcaag gtgtgtcggt tcgagtccga ccctgggcac
     7141 cacaaccgct tttagagcgg ttattttttt gtctattgct gtttaatgaa atagataaaa
     7201 c
//
LOCUS       DAWEYF010000102         7088 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.102, whole genome shotgun sequence.
ACCESSION   DAWEYF010000102 DAWEYF010000000
VERSION     DAWEYF010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.102"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(69..428)
                     /gene="rnpB"
                     /locus_tag="WGN93_001456"
     ncRNA           complement(69..428)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WGN93_001456"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(507..1610)
                     /gene="prfB"
                     /locus_tag="WGN93_001457"
     CDS             complement(507..1610)
                     /gene="prfB"
                     /locus_tag="WGN93_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ0227356.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1713..2606)
                     /locus_tag="WGN93_001458"
     CDS             complement(1713..2606)
                     /locus_tag="WGN93_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ0227357.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2948..3397
                     /locus_tag="WGN93_001459"
     CDS             2948..3397
                     /locus_tag="WGN93_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ0227358.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3471..3779
                     /locus_tag="WGN93_001460"
     CDS             3471..3779
                     /locus_tag="WGN93_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227359.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3895..4737
                     /locus_tag="WGN93_001461"
     CDS             3895..4737
                     /locus_tag="WGN93_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ0227360.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4727..5473
                     /locus_tag="WGN93_001462"
     CDS             4727..5473
                     /locus_tag="WGN93_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ0227361.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5495..6082
                     /locus_tag="WGN93_001463"
     CDS             5495..6082
                     /locus_tag="WGN93_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ0227362.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6088..6267
                     /locus_tag="WGN93_001464"
     CDS             6088..6267
                     /locus_tag="WGN93_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ0227363.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6499..6939
                     /locus_tag="WGN93_001465"
     CDS             6499..6939
                     /locus_tag="WGN93_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227364.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1807 a         1884 c         1616 g         1781 t
ORIGIN      
        1 acacaaccta aataaaaatg ccgtctgaac catatttcag gtttcagacg gcatttgcgt
       61 atcggatgca caccggacgg gcggtaagcc gggttctgtc tcggacagtc attcctctag
      121 gcataccgtt accggtatgc tcaagcaacc tacccgaacg ctcggcgggc agcgtcattg
      181 cgttctgttt ggtcttgctc cgaatggggt ttggcctgcc gcatattgtt accaaatgcg
      241 cggtgcgccc ttaccgcacc ttttcaccct tgcctgtgct gccaaagcag ccatcggcgg
      301 ttttgctttc tgttccactt tccgtcgcgt taccgcgccc ggccgttaac cggcattcta
      361 ccctgcggag cccggacttt cctccccgta tgccttacgc gatacgcggc gactgtctgc
      421 tcgtcccgtg tgcggcgcgg attataacac gaaacgcaaa aatgccgtct gaaacggtac
      481 aggtttcaga cggcatacgg ttcaaactac acgccctgtt tcaggctggc ttcgataaag
      541 ccgtccaaat cgccatccaa tacggctttg gtgttgccga cttcgtagcc tgtacgcaag
      601 tctttgatac gtgaggaatc caaaacatac gaacggattt ggctacccca acctacatcg
      661 gatttacctt cttccaacgc ctgtttctct tcattgcgtt tgcgcatttc caattcatac
      721 agtttggact tcaacatttc catcgcggcg gctttgttgg cgtgttgcga acggtcgttt
      781 tgacattgca ccacaatccc cgtcggctcg tgggtaatgc gcacggcgga gtcggtttta
      841 ttgatgtgct gaccgcccgc gcccgatgcg cgataggtgt cgatacgcaa atcggcgggg
      901 ttgatttcga tttcaatgga atcatcgatt tcagggtaaa cgaacacgga ggcaaacgaa
      961 gtatggcgtt tgttgttcga gtcaaacggt gaatagcgca ccaagcggtg aacgccggtt
     1021 tcggtacgca gcaaaccata ggcgtattcg ccttccactc ggatagtcgc gcggttgatg
     1081 cccgcgattt cgccgtcgtc ttcttcgagg atttcgattt tgaagccttt gcgctcggcg
     1141 tagcggctgt acatacggaa cagcataccc gcccagtctt ccgcttccgt accgcccgcg
     1201 cctgcggtga tgtcgataaa gcagttgttc gggtcggcgg gctggttgaa catccgtttg
     1261 aactccaaat ccgccatctg tttttccagc cccgccacat cttcctgcac ggcggcaaaa
     1321 ccttcttcgt cgttttcttc gacggtcatt tcaatcagca tgcggttgtc ttcgatgccc
     1381 gaagcgatgt tgtcgagcgt caacacgatg ccttcgagga ttttgcgctc tttgccgatt
     1441 tcttgggcgc gtttcgggtc gttccaaagt tcggggtctt cggaaagacc gataacttct
     1501 tccaatcggt ctttcttacc ctgataatcc atataaactc ggatgtcttc gctgcgcttt
     1561 tccaaatcat tcagggtatt gttgagctgg ttgattactt cggcttccat gattcttttg
     1621 ttctttcaaa attttagggg cgtattgtac gggattcggg tatttttttc tatggataaa
     1681 gccttctaga aacacgttcg gacggcatag cgtcaataac ggtatgccgc cagtttgcgt
     1741 ttgatttcag gcaatgcggc acgtgctgcc tcctcaccca actggatggc acgttttttc
     1801 tgatcgaatc cgccgactgc acccaaatcc aaaacctgcg gtttgataac cacatccgcc
     1861 tgccccaact cattttgcaa cgcggaaacg ctcattacgt tcagcgtctg atcgagataa
     1921 gagaagaagc cttggctgat gtttttgccc ggacgggcgg aaatatcgac ggcaatcacg
     1981 aaattcgccc cctgccgccg ggcggcactg acgggcacgg gctgcgacag accgccgtca
     2041 acatatgtat gcctgccgat gataacgggt tggaacacat tgggaatggc ggcggaagcg
     2101 cgcacagcct gcccggcatt cccttgattg aaagcgacgg ccttgccggt ttcaaaatca
     2161 gtagcaacag cggcaaattt gatgggaaac tgctgaatct gcctgccgcc gacttttcgg
     2221 ttgatgtaat tttgcagctt ttcgcctttg ataaaaccac tggtggacaa ggttaaatcg
     2281 actaaatcgg ttttgcctaa aatttcggct tccaattcga ggcggtcggg cgacataccc
     2341 gatgcaaaaa ggctgccgac aatcgaacct gccgatgtgc cggtaaccac cttcacagga
     2401 ataccgtttt ctttcaaaac cttaataata cctacatggg caaatccttt agatgcgccg
     2461 ccaccgagtg ccaaaccgac cactgcggcg ggtttggcgg tttgcaccgg cttgcgggcg
     2521 gcattatttc ccgccgtgcc gcaggcggca agcaacgcgg cggcggcgat tgccaaaagc
     2581 ggtctgattt ttgaaaacgt taccatattt tccattcctt tatatatcgc accccgtcaa
     2641 aaagagggat tgcttttctt aacaaccccc tttgacagcc aagcaaatgg gggctttgtt
     2701 aagtcatcat caaaattaat atttcttttt ttcctttacg gaaattatat ttgaaggcat
     2761 actatccaag gtgggaatta tctcacaaca ccgccgttat ccaaatatcc cgcctttttc
     2821 ccttcctttc catcaaaata ctttcttttt atattcatta acttgttaaa tcattggctg
     2881 ccgggtgtca gtttttccga caaaatccgt ctaatggggt atcaacagaa ccaaaacagg
     2941 aacacttatg aaaatcggaa caacttggca gacggcatcc gctatgctgg ttttgcgtct
     3001 gtttgccgca tatgaatttt tggaatcggg tttgcaaaaa tggaacgggg agaattggtt
     3061 ttctgaaatc aacgatcaat tcccattccc gttcaacttg ctgccggacg cgttaaactg
     3121 gaatctcgct atgtatgcgg agcttttact gcccgtactg ttgcttttgg gtttggcaac
     3181 gcgtctgtcg gcattagggc tgatggtcgt taccgccgtc gcttgggctg cggttcacgc
     3241 cggttcgggt tacaatgtct gcgacaacgg ttataaaatg gctttaattt atatcgtggt
     3301 attaatcccg ctgcttttcc agggtgcggg cggatggtcg ctggatacgc tgctgaaaaa
     3361 acggttttgc ccccaatgcc gtctgaagca agattgattc agtcgtggaa tctgacttta
     3421 aacattccaa ccttatctcg ttaacttgat attctgaaaa ggaaatagaa atgaacaaaa
     3481 acattgctgc cgcactcgcc ggtgctttat ccctgtcttt ggccgccggt gcagttgctg
     3541 ccaacaaacc ggcaagcaac gcaacaggcg ttcataaatc cgcccatggc tcttgcggcg
     3601 cgtccaaatc tgccgaaggt tcgtgcggcg cggctggttc taaagcaggc gaaggcaaat
     3661 gcggcgaggg caaatgcggt gcgaccgtaa aaaaaaccca caaacacacc aaagcatcta
     3721 aagccaaggc caaatctgcc gaaggcaaat gcggcgaagg caaatgcggt tctaaataat
     3781 cccacccctt caaaccaagc cgcgtttttc agtaaaatgc ggctttttta acggcaaaca
     3841 aagatttttt aacaagcaca tcattctttt gtgccatccg aaccgggtaa aaatatgatt
     3901 caacacgcag gcttgggcta ccgccgcgac ttggcggaag actttctctc gctttccgaa
     3961 aacagcccga tatgctttat cgaagccgca ccggaaaact ggctgaaaat gggcggctgg
     4021 gcgcgcaaac agtttgaccg tgtggcggaa cggctgccgc tggcgttgca cggattgtct
     4081 atgtcgctgg gcgggcaagc accgctggat actgatttga tagacggcat caaagaaatg
     4141 atgcgccgtt acgattgcac gtttttctcc gaccatttga gctactgcca cgacggcggt
     4201 catctttacg atttgttgcc gctgcccttt accgaggaaa tggtgcatca tacggcgcgg
     4261 cgtatccgcg aagtgcaaga ccgtttgggc tgccgcatcg ccgtggaaaa cacgtcctac
     4321 tatctgcatt ccccgcttgc cgagatgaac gaggtcgagt tcctcaacgc cgtcgcacgt
     4381 gaggccgatt gcggcattca tctggatgtg aacaatatct acgtcaacgc cgtcaatcac
     4441 ggcctgttgt cgccggaggc ttttttgaaa aacgttgacg cagatcgcgt gtgctatatc
     4501 catattgccg gacatgacgt ggaaacgccg gaattgttga ttgatacaca tggcgcggca
     4561 gttttgccga ctgtttggga cttgctcgaa cttgcctatg ccaagctgcc gacgattccg
     4621 cccaccctgt tggaacgcga ttttaatttc ccgccttttg ccgaactcga agccgaagtc
     4681 gccaaaatcg ccgattatca aacgcgtgcc ggaaaggaat accgccgtgc agcctgaaac
     4741 ctccgcccaa taccagcacc gtttcgccca agccatacgc gggggcgaag ccgcagacgg
     4801 tctgccgcaa gaccgactga acgtctatat ccgcctgata cgcaacaata tccacagctt
     4861 tatcgaccgc tgctataccg aaacgcggca atactttgac agcgaagaat ggagccgtct
     4921 gaaagaaggt ttcgtccgcg acgcgcacgc ccaaacgccc tattttcaag aaatccccgg
     4981 cgagttccta caatattgcc aaagcctgcc gctttcagac ggcattttgg cactgatgga
     5041 ttttgaatat acccaattgc tggcagaagt tgctcaaatt ccggatattc ccgacattca
     5101 ttattcaaat gacagcaaat acacaccttc ccctgcggcc tttatccggc aatatcgata
     5161 tgatgttacc gatgatttgc atgaagcgga aacagccttg ttaatatggc gaaacgccga
     5221 agatgatgtg atgtaccaaa cattggacgg cttcgatatg atgctgctag aaataatggg
     5281 ttcctccgcg ctttcgtttg acaccctcgc ccaaaccctt gtcgaattta tgcctgagga
     5341 cgataattgg aaaaatattt tgcttgggaa atggtcaggc tggactgaac aaaggattat
     5401 catcccctcc ttgtccgcca tatccgaaaa tatggaaggc aattccccgg gccaaaacca
     5461 tctatccgca taaaattacc ttgttcccga tactatgccg ctacccgacc tgaccgatgc
     5521 cgaattaata gagtcgcgta aactgcttct gcattttgcg cggcttcagt tgcccgacca
     5581 ccctgatttg gctgaagatt tagtgcagga aacattgctg tccgcataca gcgcaggcga
     5641 cagttttcaa ggcagggcac ttgtcaacag ctggcttttt gccatattga aaaacaaaat
     5701 tattgacgca ttacgtcaaa tcggaaggca gaggaaagtc tttaccacac tggatgacga
     5761 gctactggat gaagcatttg aaagccattt ttcccaaaac gggcattgga cgccggaagg
     5821 gcagccgcaa cattggaaca ctccggaaaa atcattaaac aacaacgaat tccaaaaaat
     5881 tctgcaaagc tgcctataca acctgcctga aaacaccgca cgggtattta ccctgaagga
     5941 aatactcggt ttttcatccg acgaaataca acaaatgtgc ggtatcagca cgtccaacta
     6001 ccacaccatt atgcaccgcg cccgagaatc attgcgccaa tgcctgcaaa tcaaatggtt
     6061 caaccaagaa aacccgaagt aaacgttatg aaaaaatgcc gcgatatcgc cctgcttctt
     6121 tccaaacatc aggaccggga aaccaccccg ggcgagaaga tttccatata cacacacctg
     6181 ctgttctgtc cgtattgccg tgaatataaa agacaacttc aaaccatcaa aagatcactg
     6241 gcaaaaacaa ccagaacttc aaaataaatg ccgtctgaaa aggcttcaga cggcataagc
     6301 tgacggaaaa aaatcaaacc gatttactgt tatcggcagt tcatccataa tacacgcttc
     6361 aaaagcagca tattcctcca tacggaatat ataaatacgc aaaacacgaa ggctgcatca
     6421 atttgcttta tttgccttat ttcacagacg gcgctacccc tcccgcccaa cccgttcttt
     6481 ctgaatgagc agatttcaat gattaaggaa accctaatgc gcccaatctt cctatctttc
     6541 gttttactcc ctattttgat aaccgcctgc agcacaccgg acaagtctgc ccgatgggaa
     6601 aatatcggca caatctcaaa cggcaatatt catacatata tcaataaaga cagcgtgaga
     6661 aaaaacggaa atctgatgat tttccaagat aaaaaagttg ttaccaatct aaaacaagaa
     6721 cgttttgcca acacccccgc atacaagact gccattgccg agtgggaaat ccactgcaac
     6781 aacaaaacat accgcttaag ttcgctacag ttgtttgata caaaaaacac ggaaatttcc
     6841 acacaaaact acacagcctc ttccctccgc ccgatgagca tcctgtccgg gacattaacc
     6901 gaaaaacaat atgaaaccgt atgcggaaaa aaactctgat tgcaacttat acacaaactt
     6961 acccacaaac cttatcataa aaatgccgtc tgaaatactg aaatatcagc atttcagacg
     7021 gcattttgcc attccctgaa aattatccac aaagttatcc acattatttt ttaaaaccgg
     7081 cttccatc
//
LOCUS       DAWEYF010000103         7057 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.103, whole genome shotgun sequence.
ACCESSION   DAWEYF010000103 DAWEYF010000000
VERSION     DAWEYF010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7057
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.103"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            140..721
                     /locus_tag="WGN93_001466"
     CDS             140..721
                     /locus_tag="WGN93_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ0227365.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="WGN93_001467"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="WGN93_001467"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ0227366.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="WGN93_001468"
     tRNA            1860..1937
                     /locus_tag="WGN93_001468"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="WGN93_001469"
     tRNA            1962..2038
                     /locus_tag="WGN93_001469"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="WGN93_001470"
     tRNA            2066..2141
                     /locus_tag="WGN93_001470"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2277..2783
                     /locus_tag="WGN93_001471"
     CDS             2277..2783
                     /locus_tag="WGN93_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ0227367.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2780..4558
                     /locus_tag="WGN93_001472"
     CDS             2780..4558
                     /locus_tag="WGN93_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ0227368.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4671..5495
                     /locus_tag="WGN93_001473"
     CDS             4671..5495
                     /locus_tag="WGN93_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ0227369.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6257..7045)
                     /locus_tag="WGN93_001474"
     CDS             complement(6257..7045)
                     /locus_tag="WGN93_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ0227370.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRIAQPAMITVSLRR
                     TGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDVGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
BASE COUNT         1503 a         1827 c         2120 g         1607 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 ttttgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agtcgggacg ggcagtcatt gggtaagaaa atcatgagaa tccgcgtgtt
      481 gaaaaccgac ggccgcaatc ccggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ttttcagacg gcatttttat cttcagaacc
      781 gctcaagcat cgtgcagtga agccgcgtgc agggtgtttt ccatcaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aattccacgt cgccgcacag gctgccgtcg tccaaacggt tgatgcccac atcgataacg
      961 accgcgccgg gtttgatcca ttcgcctttg acaaagttcg gaatgcccac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgcc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag caattccaac gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagcgg tagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ctcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggca gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc caccgaccaa aaccacggcc aggcaaggca tgtgcagatt gtcctgttgg
     1561 cgttgcgcta ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatattga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttctcgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtggg tttttctgtc ttttatggtt tttgtcggag gctttgatgg
     2281 ttgacgcttg gtctgtccct gattttgaat cgaaaatctg tccgcccgag gcgttggcgg
     2341 cgcgtttggc gttgttgccg cgcccgctgg tgtttaccaa cggctgtttc gacatcctcc
     2401 acagggggca cgttacttat ctggcgcagg cgcgttcgat ggggggcgcg ttggtgctgg
     2461 cgttgaatac cgatgcttcg gtgcggcgtt tgggcaaggg cggcgaccgc ccgattaatc
     2521 ctttggagaa ccgtgccgcc gttgccgccg ctttggaaag tgtggatttg gtaacgtggt
     2581 ttgacgggga tacgccggcg gcgttgattg aggcggtcaa acctgagatt ttggtcaagg
     2641 gcggcgattg ggctgcggat aagattgtcg gtgcggcaga aacgttggcg cgcggcggtc
     2701 aggtgttttc aattccgttt ctgcaccaga cttcgacaac gaagactttg gcaaaaatcc
     2761 gtgcggcaga gggcggaaaa tgacggtttt gaagctttcg cactggcggg tgttggcgga
     2821 gcttgccgac ggtttgccgc aacacgtctc gcaactggcg cgtatggcgg atatgaagcc
     2881 gcagcagctc aacggttttt ggcagcagat gccggcgcac atacgcgggc tgttgcgcca
     2941 acacgacggc tattggcggc tggtgcgccc attggcggtt ttcgatgccg aaggtttgcg
     3001 cgagctgggg gaaaggtcgg gttttcagac ggcattgaag cacgagtgcg cgtccagcaa
     3061 cgacgagata ctggaattgg cgcggattgc gccggacaag gcgcacaaaa ccatatgtgt
     3121 gacccacctg caaagtaagg gcagggggcg gcaggggcgg aagtggtcgc accgtttggg
     3181 cgagtgtctg atgttcagtt ttggctgggt gtttgaccgg ccgcagtatg agttgggttc
     3241 gctgtcgcct gttgcggcag tggcgtgtcg gcgcgccttg tcgcgtttag gtttggatgt
     3301 gcagattaag tggcccaatg atttggttgt cggacgcgac aaattgggcg gcattctgat
     3361 tgaaacggtc aggacgggcg gcaaaacggt tgccgtggtc ggtatcggca tcaattttgt
     3421 cctgcccaag gaagtagaaa atgccgcttc cgtgcaatcg ctgtttcaga cggcatcgcg
     3481 gcggggcaat gccgatgccg ccgtgctgct ggaaacgctg ttggtggaac tggacgcggt
     3541 gttgttgcaa tatgcgcggg acggatttgc gccttttgtg gcggaatatc aggctgccaa
     3601 ccgcgaccac ggcaaggcgg tattgctgtt gcgcgacggc gaaaccgtgt tcgaaggcac
     3661 ggttaaaggc gtggacggac aaggcgttct gcacttggaa acggcagagg gcaaacagac
     3721 ggtcgtcagc ggcgaaatca gcctgcggcc cgacgacaga ccggtttccg tgccgaagcg
     3781 gcgggattcg gaacgttttc tgctgttgga cggcggcaac agccggctca agtgggcgtg
     3841 ggtggaaaac ggcacgttcg caaccgtcgg tagcgcgccg taccgcgatt tgtcgccttt
     3901 gggcgcggag tgggcggaaa aggcggatgg aaatgtccgc atcgtcggtt gcgctgtgtg
     3961 cggagaattc aaaaaggcac aagtgcagga acagctcgcc cgaaaaatcg agtggctgcc
     4021 gtcttcggca caggctttgg gcatacgcaa ccactaccgc caccccgaag aacacggttc
     4081 cgaccgctgg ttcaacgcct tgggcagccg ccgcttcagc cgcaacgcct gcgtcgtcgt
     4141 cagttgcggc acggcggtaa cggttgacgc gctcaccgat gacggacatt atctcggggg
     4201 aaccatcatg cctggtttcc acctgatgaa agaatcgctc gccgtccgaa ccgccaacct
     4261 caaccggcac gccggtaagc gttatccttt cccgaccaca acgggcaatg ccgtcgccag
     4321 cggcatgatg gatgcggttt gcggctcggt tatgatgatg cacgggcgtt tgaaagaaaa
     4381 aaccggggcg ggcaagcctg tcgatgtcat cattaccggc ggcggcgcgg caaaagttgc
     4441 cgaagccctg ccgcctgcat ttttggcgga aaataccgtg cgcgtggcgg acaacctcgt
     4501 cattcacggg ctgctgaacc tgattgccgc cgaaggcggg gaatcggaac atacttaaaa
     4561 aatacaccct ttttcaacac ggggcggcat ccgtccgaat ccgtccggat tctgccgccc
     4621 gacagactgc cgcccaggcg ggcggggttt caaacattga ggaaattcta atgaaatggc
     4681 tcttcaccct tttggcggta ctcaatattg ccgtattcgg cggcacggtg ggctataaat
     4741 tggccgttaa agcgacgggc ggcgtgccgg aaaaccgggc cgtcgaaaac acgccccccg
     4801 caacgcccgc cgccgacaat gcggcggcat ccgtggagga tacggcggca ctgctcaaac
     4861 cgggcgacat cctgaccgaa gagcaggccg agcagttgcg cttgaaaaag gaagcggaac
     4921 agaaaaaact gagggagaaa aaacagcgtg aagaaaaagc ccgccgcgaa aaactcgccg
     4981 ccgaaaaggc gcaggcggaa cgcgaaaacg gcgcggcgga tgccttatgc gccgcgcagg
     5041 caagcctcac gatggacgaa gacgactacc accgcatcaa agggcttttg ggcaaatggt
     5101 cgcacgttgc cagcaggagc gttgaaaaac gcaccgccaa agccaaacct gccgacaaaa
     5161 cctaccgcgt cgtcctgccc gtttccgccg atgccgaaaa tcaggcggcg gagctgtctg
     5221 ccaaaggttt caaccccata ccgtttgacg gcgcattgag tttgggtgtc ggcaacagtc
     5281 gggaaaacgc ccaagccctg caaaaccggc ttgccggcgc cggattcggc ggggcgcata
     5341 ttgtcgaaca ctttgccgaa gccgacaggc aggacgattc tttgagcgtg tcgcgtatga
     5401 cggttttgtt taccggcgtg aatgccgccg atgcggacga aatccgtaaa atcacgtccc
     5461 tatacggcaa actgaacctc aagtcttgca aataggcgcg aaagccggac gataaacgcc
     5521 aaacccaccg cgaaggtggg tttggcgttt cggttttgag tatctgatat ataaaaaggg
     5581 aatgtatgtc tcgtatatgc cgactccaag tgtgaaagtg atgatgggga aatatggtgt
     5641 ttaatggttc ggaacggacg gcttccgagt ggttttgatt atacgctaat aataataatt
     5701 atcaataaaa atttaaaaat aaatgcagat tttttgtaat acgatgaaaa ataaacaaat
     5761 taacctgtcc gccgatgttt gtgattcggg tcggcaaact ttcattgtgt cggacaaatc
     5821 ggggtcggca ggcatagctg agggcttcgt gcctgacgga aataagcctg ccgtgtttga
     5881 acatccgtcc gatttggcgc ggacagggtt gtcattcggg ggtgtttgag cgtggattcg
     5941 gggatgcaaa agcggtaaaa ccgttgcgga tgaaggctta cggacggctt taggtatttt
     6001 taagtgtatt caaacaacaa caaaacgctt cttctattgc cgtatttagg gcttgcgcgg
     6061 cagcctgcac accgtggagg ccgagtgttt cgttggttgc ggcatcggga cgggcggcaa
     6121 ggttttccgg ccggtttttc cattttttcc gacagagccg tgatgcttgg gaatggcggt
     6181 ttgcccgttt cagaccgccg ccgttttggg ctgcgatgcc gtctgaaccg ttcagacggc
     6241 atttttgccg cctttttcaa tattccgccg aatgccaaaa cggctgtccg actgtcggcg
     6301 tgctggcttg cgctttgtcg cgtgcttcga ccggtccggc ttcaaatgcc agccgtccgg
     6361 attcgacggc gagtgcgaag gcgcgtgcca tattgaccgg atcgccgctg cgggaaacgg
     6421 cagtattcaa aagcacgccg tcaaaacccc attccatcac ttgtgccgcc tgtgagggca
     6481 aacccaagcc cgcgtcgata atcagcggcg tgtcgggcag gcgttcgcgc aggacgttca
     6541 acgcgtaggc gtgaaccgcg cccaaacccg tgccgatcgg agccgcccac ggcattaacg
     6601 cctgacagcc cacatcgagc aggcggcggc aggcaatcag gtcttcggtg caataaggca
     6661 gcactttgaa gccgtcttta atcaggattt ccgccgcttc gacaagttgg aacacatccg
     6721 gctgcaaggt gtcgtcgtcg ccgatgagtt cgagtttaat ccaatcggtt tcaaacactt
     6781 cgcgcgccat ttgcgccgtc gttaccgctt cctgcacgct ttggcagcct gccgtgttcg
     6841 gcaggacggg aacgccggtt tcttgaagca gcgaccaaaa cccctgaccg tgcgcctcgc
     6901 cgccgcttcc cgtgcggcgc agcgagacgg taatcatcgc gggttgggcg atacggacgg
     6961 attgtttgag gatttcaggg gtcgggtagg cagccgtgcc gagcagcagc cgtgaaggga
     7021 aagtttctcc gtatagggtg agcataatgg gttcctt
//
LOCUS       DAWEYF010000104         7001 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.104, whole genome shotgun sequence.
ACCESSION   DAWEYF010000104 DAWEYF010000000
VERSION     DAWEYF010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7001
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.104"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(76..1497)
                     /locus_tag="WGN93_001475"
     CDS             complement(76..1497)
                     /locus_tag="WGN93_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ0227371.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1857..2216)
                     /locus_tag="WGN93_001476"
     CDS             complement(1857..2216)
                     /locus_tag="WGN93_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ0227372.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFYRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2213..2818)
                     /locus_tag="WGN93_001477"
     CDS             complement(2213..2818)
                     /locus_tag="WGN93_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ0227373.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2865..3347)
                     /locus_tag="WGN93_001478"
     CDS             complement(2865..3347)
                     /locus_tag="WGN93_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ0227374.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3551..3648
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3859..4959
                     /gene="gcvT"
                     /locus_tag="WGN93_001479"
     CDS             3859..4959
                     /gene="gcvT"
                     /locus_tag="WGN93_001479"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ0227375.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            5121..5507
                     /gene="gcvH"
                     /locus_tag="WGN93_001480"
     CDS             5121..5507
                     /gene="gcvH"
                     /locus_tag="WGN93_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ0227376.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNDDLPGAPETANSDPYGAGW
                     FFKIKPANVADYDGLLTAEQYAGEVD"
     gene            5652..6899
                     /locus_tag="WGN93_001481"
     CDS             5652..6899
                     /locus_tag="WGN93_001481"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ0227377.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFSAAVLPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYTLDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     AAASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKNPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHEYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIRALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1787 a         1674 c         1968 g         1572 t
ORIGIN      
        1 tgtcggaaag gaaaaatatt gatttgatta tgccggaatt taaaatgccg tctgaatgtt
       61 cagacggcat agcgtttaca gcagtttgaa aacgaaaaag ataagggtat gtacgatgaa
      121 gacgggtgtc aggaaggcga ccgaccacat catatagccg aagaaagtcg gcatcggtac
      181 gccgcgctgt tcggcaatgg ccttgaccat gaagttcggt gcgttgccga tgtaggtcag
      241 tgcgcccatg aataccgaac ccatagaaac cgccagcagc gaatgaaaca gggtacccgt
      301 catcaaggct tgggcatcgc cgcccgccat attgaaaaaa acgagataag tgggcgcgtt
      361 atccaagaat gccgacaata tgccgctcat ccaaaaatac atcacattaa tcggatgacc
      421 tgccgtatcg tgaaccagcg ataccacccc gcccagcgcg cctgcctcgc ctgctttcag
      481 aatgctcagg acgggaaaga tggtgatgaa gatgccgagg aagagtttgc ccacttcggc
      541 gatgggttca aagttgaatt cgttgcctgc gcggacttgt ttgggcgtga ttgccataga
      601 tacggcggtc aatgcaatca ggatgacatc gcggacgagg ttttgcaggg cgtaacggct
      661 gccgaggatt tcaaatcccg ggtgttcggg tttccaaagg ccggacatta gaaccgcgcc
      721 gaccacgccc gaaagcagga ggaagttcca tttgccgaag atggcgattt tttcgggttt
      781 ttcctgttgt gccggcgtat cttgtgcaat gctttcctgt ttgaagaaac ggttgtcgat
      841 gaaatagaag gcggtcaaca ggacagcggt gctgatcagg acgggggcga acatatgttt
      901 gaccgtccac atgaaatcta cgcctttgag gaagccgagg aagagtgggg ggtcgcccaa
      961 aggggtcaga ccgccgccga tgtttgcaac caggaaaatg aagaagatga cgatgtgcac
     1021 gcggcgggta cggttttggt tggctttcag cagcggacga atcatcagca ttgctgcgcc
     1081 ggtcgttccc atgatagagg caagtgccgt accgacggca agcagggcgg tgttgagctt
     1141 gggtgtgccg ttcaagtcgc cccaaaccaa aatgccgcct gaaatggtgt acagggcaag
     1201 cagcagcagg atgaaaggga tgtattcttc aacgagtgcg tgtgcgacgg tatggatacc
     1261 ggcggacgcg ccaaaaacca aactgaacgg gatgaggaag agcaatgtcc aaaaggcggt
     1321 aattttgccg taatggtgat gccaggtatg cgaaaaaaac aagggaccca atgcgataga
     1381 cagcaaaatc agggcaaagg gcaggcccca cagcaggttt aggtttgcgc cgtccaaatc
     1441 tgcggcgtaa accgatgctg ggaaaagcat tagtgaaaac aggggtaggt ggcgcatcgt
     1501 gtttcctcga ttcaagcact gccttgcgcg gcgcgtggga gtgatacagg caccgtgccg
     1561 cccggacata ggcggactgt gctgcctgtt tgtttttgaa aaaagttttc cgattgattg
     1621 taaagtaaat aatcaggata aaccagtttc ccaaaccgga aggcggcggg aaggcggatt
     1681 gctgtgcttg ggaatatatg ttctttttga taaataattt tatttaaaac aaataaatat
     1741 atgtctttaa taaataatct atcgaaaacg aaaaatgaat ttattttaac atatatttgc
     1801 aatgaaacag gtttgccccc cccgtttgtt tgcccttatc cctttcagta cggcattcaa
     1861 gattcgggcc tgcgccacat ccatatggcg acaagggaac aaaaaaccga tgaaaccgcc
     1921 ccgacccacc agcgttgggg aaactgccaa aacattatca ggcaggatgc ggtcatcata
     1981 ctgatggcga atattttggc tttgcgcggc actgcgccgt tttgttccca gttatgaacc
     2041 atcgggccga aatagcggtg ccggtgcagc cagcggtaaa agcgcgggga tgcctttgcc
     2101 cagcaggcgg cggagagcag tacgaacggc gtggtcggca acagcggcaa aaaaatgccg
     2161 atgataccca acagcaggga gatgcagccg caggcaatta aaagataacg tatcattttg
     2221 aaatattttt cttattgtgc ggataagggc aggatgtgat accgagtttt gcccagcctt
     2281 catgtcccat tttttccagc agggcgatat tgcgttcgaa tattgccgaa gcgtcgggaa
     2341 aggcttgtgc ggctttggca atgctgtctt cgcggatgag gtgcagcgtc ggatagggag
     2401 aacggttggt gtagttgccg atgtcgtcgg gttcggtatt ctgaaagcgg aattggggat
     2461 ggaacggtgc gatttggacg atgccttcca agccgttttc gataacggcg gcatcggcaa
     2521 tatcgagcat atcgttgaat acgtcgaaat cggggaatag ggtcgggtga accagcaggg
     2581 tggtttccag ttcggtggcg ggtgtattgc ccagtcgctg cagttcttcg tccaagtctt
     2641 ccaaaaaact gtcaaggtgt ttggcttcgc tgattgcgat gcggacaagg tttttaacgt
     2701 ggggggcttt ggcaaaggga cacaggttca gaccgatgac ggctttttcc aaccattgtc
     2761 cggtgtgttc ggcaacagca tctttatttt cggaagtatt gatattcatt attgtcatgt
     2821 aaatgtgttt gcagattgca cgtgcgggaa aatcgggaag ggcactattc cttcagcagg
     2881 tggttgagcg gcagggaggt ggtgtgtttg atttctttta aaacaaagct cgattgcgca
     2941 tcttgtacgc cgtggtggga caggagcgta tccaaaacaa aatgggaaaa cgcgttcata
     3001 tcggtaaaaa acgcctgaag caggtagtcg gtttcccctg tcagggcgaa gcagctcaag
     3061 acttcaggcc attttcgaac cgatgcggca aagtcttccc gcgcgtcttt tgctttgcgg
     3121 atggaaacgc ggataaatgc ctgaagcccc aggttgacgg attccggaga cagcagcgcg
     3181 gcatattggc ggacgatgcc ggcatcttcc aactgcttca gacggcgcag gcacggagaa
     3241 ggcgaaagtg cgacacgttc ggacagttcg acattggtca gcctgccgtt ttcctggaga
     3301 acctgtaaga ttttaatatc ggttttgtct aaagtgagtt ggggcatatt tgcgttccgt
     3361 tttaaggaat tcggattgtc tgtccgtatg tttgcggcaa tccgcacaga tggagaccat
     3421 attaacatat aaaaagttat accgtcatcc gggacaaatt ttgttttcgg aaaatcatgt
     3481 gaaaacagag gcggtcggtt tgcatctctt ttaagacggc ttgcccaaac cgccgattca
     3541 agacataatc gggaaatgtg caggagagtg ttacacccaa ctacaatgta accaccgaag
     3601 gcgcagacac ccttaaatcg ctcaggtatc agggactgca cattgaaaca aacaatctgg
     3661 agagcggcgt tggaataacg tccaccgaag gggagaaggc cgtctgaacc accattcaga
     3721 caaccgcgca aagcagtgag cagactggtt tgccatcatg cggatacggc cgaaaatctc
     3781 aggttcaagg acagataggg tcatccgcgc acaggtgcgc gggtggcatc tgaacaaaaa
     3841 atccggagaa acttgagaat gattactctg aaaaccaccc catttcatca agcccatcaa
     3901 gatgcaggcg cgaagccggt agattttgcc ggctgggagc tgcccatcca ttatggttcg
     3961 caaatcgccg aacacgaagc cgtgcgcacc gacgccggta tgtttgacgt atcccatatg
     4021 cttgttaccg acgtagcagg cgcaaatgcc aaagcctttt tccgcaaatt gattgccaac
     4081 gatgtcgcca agctcgcttt tgtcggcaaa gccctttatt ccgctttgct caacgacaac
     4141 ggcggcgtga ttgacgactt aatcgtttac cgcaccaacg aagccgaaac ccaataccgc
     4201 atcgtgtcca acggagcgac tcgcgaaaaa gacacggcgc aattccacaa agtcggacaa
     4261 gagttcggcg ttgcctttaa tccgcgctac gacctcggca tgctcgccgt acaaggccct
     4321 aaagccatcg aaaaactcct gaccgtcaaa cctgaatggg cggatgtgat tcacggcctc
     4381 aaaccgttcc aaggtgcaga cttgggcaac gattggtttg tcgcccgcac cggctatacc
     4441 ggcgaagacg gcgtcgaagt gattctgccg ggcactgaag ccgtcgcatt cttcaaagcc
     4501 ctgcaagcag caggcgtaca accttgcggt ctcggcgcgc gcgacaccct gcgcatggaa
     4561 gccggcatga acctctacgg caacgatatg gacgacgata ccagcccgct cgaagcaggc
     4621 atgggttgga ccgttgattt gaaagacgaa agccgcgatt ttgtcggcaa agctgccttg
     4681 ttggcattga aagaaaaagg cgttgccgtc aaacaggtcg gtttgctgct cggcaaaggc
     4741 ggcatcctgc gcgcgcatat ggaagtgttg accgacaaag gcaaaggcga aaccaccagc
     4801 ggcgtattct cgcccagcct gaaacaatcc atcgccatcg cccgcgtacc gaaagacttt
     4861 gacggcgata ccgctaaagt gctgatgcgt ggcaaggaag tggacgtgcg cgtattgaag
     4921 ttgccgttcg tccgcaacgg tcaaaaacag tttgattaat atcggttcag acggcatttt
     4981 catttcatat gccgtctgaa agcaggtttt aattgttgtc cgatacggac gtttgtagaa
     5041 agccttgaac aaggtatctg tggatattga ttcatataga tgccgtctga aaataacccc
     5101 taccaatgga gaatcaaacc atgagcaaca acatcccagc agaactgaaa tatgttgcca
     5161 gccatgaatg gctgcgcctt gaagaagacg gtaccatcac cgtcggcatt acccaccacg
     5221 cgcaagagct gttgggcgac atcgtgttcg tcgagctgcc cgaagtcggc gcaaacctgg
     5281 ctgccgaaga gcaagccggt gtggttgagt ctgtaaaagc cgcatctgac gtgtacgcgc
     5341 cgattgcggg cgaagtcgtt gccgtcaacg atgacttgcc cggcgcacct gaaactgcca
     5401 acagcgaccc ttacggcgca ggctggttct tcaaaatcaa accggcaaac gttgccgact
     5461 acgacggtct gctgactgcc gaacaatacg cgggcgaagt ggactaaacc ctatcctgat
     5521 aatgggatgc ctgatttgag aaactgcact ttcagacggc aaggatgcgt ttggaagtgc
     5581 ggtttttgtc tgtgtcttca aggtcagtta ggctataata acggtctata tccatcttta
     5641 ccgatttttt catgcaactt accgctgtcg gactcaatca tcaaaccgca cctttaagca
     5701 tacgggaaaa gctggcgttt tccgccgccg tcctgcccga agccgtccgc aatcttgccc
     5761 ggagcaatgc ggcaacggag gcggtaatcc tttctacctg caaccgcacc gagctttact
     5821 gtgtcggcga ttcggaagaa atcatccgat ggcttgccga ttaccacagt ttgccgattg
     5881 aagaaatccg tccgtatctg tacacgctgg atatgcagga aaccgtgcgc cacgccttcc
     5941 gcgtcgcctg cgggctggat tcgatggtgt tgggcgagcc gcagatttta ggacagatta
     6001 aggatgccgt cagggttgct caagagcagg aaagtatggg taagaaactc aatgccctgt
     6061 tccaaaaaac cttttccgtt gctaaagagg tccgtaccga tactgccgtc ggcgagaact
     6121 cggtttctat ggcggccgct tccgtcaagt tggcggagca gatttttccc gacatcggcg
     6181 atttgaatgt cttgtttatc ggcgcaggcg aaatgattga gctggttgcc acttattttg
     6241 ccgccaaaaa tccccggctg atgacggttg ccaaccggac gctggcgcgt gcacaggagt
     6301 tgtgcgacaa gctcggtgtc aacgccgaac cgtgcctgct gtccgatctg cctgccattt
     6361 tgcatgagta cgacgtggtg gtttcttcaa cggcaagcca gttgcccatt gtcggcaaag
     6421 gtatggtgga gcgcgcattg aaacaaaggc agagtatgcc gttgtttatg cttgacttgg
     6481 ccgtgccgcg agacattgag gcggaagtcg gagatttgaa cgatgcctat ctttatacgg
     6541 tggacgatat ggtcaatatc gtccaaagcg gcaaggaggc aaggcagaag gccgccgccg
     6601 ccgccgaaac gctggtgtcc gagaaggttg ccgaatttgt caggcagcag cagggcaggc
     6661 agagtgtccc gttaatcagg gcattgaggg atgagggaga gaaagcgcgc aaacaggtct
     6721 tggaaaatgc gatgaaacag cttgctaaag gcgcaacggc agaagaggtt ttggaacggc
     6781 tgtccgtcca actgaccaac aagctgctgc attcgccgac ccaaactttg aataaggcgg
     6841 gggaagaaga taaggatttg gttcatgccg tcgcgcagat ttatcatttg gacaaataac
     6901 ggtgcgccgg gaaaaatgcc gtctgaagag gtttcagacg gcattttttt gtgccgcctg
     6961 acaacatcgt aaaatcccac attatatcga tgtaatcaca a
//
LOCUS       DAWEYF010000105         6770 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.105, whole genome shotgun sequence.
ACCESSION   DAWEYF010000105 DAWEYF010000000
VERSION     DAWEYF010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6770
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.105"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(130..489)
                     /gene="rplT"
                     /locus_tag="WGN93_001482"
     CDS             complement(130..489)
                     /gene="rplT"
                     /locus_tag="WGN93_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ0227378.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(502..699)
                     /gene="rpmI"
                     /locus_tag="WGN93_001483"
     CDS             complement(502..699)
                     /gene="rpmI"
                     /locus_tag="WGN93_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ0227379.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(846..1367)
                     /gene="infC"
                     /locus_tag="WGN93_001484"
     CDS             complement(846..1367)
                     /gene="infC"
                     /locus_tag="WGN93_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ0227380.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1385..3298)
                     /gene="thrS"
                     /locus_tag="WGN93_001485"
     CDS             complement(1385..3298)
                     /gene="thrS"
                     /locus_tag="WGN93_001485"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ0227381.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKL
                     VDACDPITEDSSVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVE
                     WEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3351..3427)
                     /locus_tag="WGN93_001486"
     tRNA            complement(3351..3427)
                     /locus_tag="WGN93_001486"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3391..3393),aa:Val,seq:gac)
     gene            3606..4721
                     /gene="tgt"
                     /locus_tag="WGN93_001487"
     CDS             3606..4721
                     /gene="tgt"
                     /locus_tag="WGN93_001487"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ0227382.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVIGQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQAQFHENRARGTD"
     gene            4731..5813
                     /locus_tag="WGN93_001488"
     CDS             4731..5813
                     /locus_tag="WGN93_001488"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ0227383.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            6005..6406
                     /locus_tag="WGN93_001489"
     CDS             6005..6406
                     /locus_tag="WGN93_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ0227384.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(6469..6759)
                     /locus_tag="WGN93_001490"
     CDS             complement(6469..6759)
                     /locus_tag="WGN93_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227385.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGGGNIGSMGLKVPR"
BASE COUNT         1718 a         1822 c         1582 g         1648 t
ORIGIN      
        1 aatttaatcc actatatttt aacgcaaatt tatttaaaaa aatagacttt aaagaaagaa
       61 aatcaatcac atagaatttc tgcaaacaaa gaaaaaagga agccgcagct tccttttcaa
      121 ttttttggat taagcagcca aagcagcttt ggctttttca accaattgtg caaaagcggc
      181 tttatcgaac acggccaaat cagccaatac tttgcggtcg atttcgatag aggcgcgttt
      241 cagaccattc ataaatttgc tgtaagacaa cccgttttca cgcgcacctg cattgatacg
      301 gacaatccac aattgacgga attggcgttt gcgttggcgg cggtcgcggt atgcgtattg
      361 gccggctttc attaccgcct gcttggcaac gcggtaaacg tttttacgac ggccgcggta
      421 gcctttggct aacgcgaaga ttttttggtg acgggcacgg gcggtaacac cgcgttttac
      481 gcgtggcata ttctaaactc cttaagcgta gggtaacatt ttagcaacag aagccaaatc
      541 gcgatcgttt accatagagg taccgcgcag ttggcgtttg tttttggtgg tctttttagt
      601 caagatgtgg cgtttgaacg catgagcgcg tttcacaccg ccgttaccca gtactttaaa
      661 gcgttttttc gcgctagact tggttttcat tttaggcatg ggaaaactcc attcgttatc
      721 ggataaggca ttagggggtt ttaaaacatc agtttcaaac acttgaaccc acaataccac
      781 ggttttttgc cgcaattgaa aacttactcc gaagcggcaa tcggagtaag cggagaatta
      841 tagctttatt ttttcttcgg cgcaatcatc atcaccattt ggcgaccttc cattttggga
      901 aaggactcga tttgcgccac ttcagccaaa tcttctttta cacgttccaa aagttgcgcg
      961 ccgagttgct ggtgagccat ttcacggccg cggaaacgca atgtcacttt gactttatcg
     1021 ccgtcggcaa ggaagcggtt aatgttgcgc atcttgattt gataatcgcc ctcatccgta
     1081 cccggacgga atttaatttc cttgatttgt acctgctttt gatttttctt ggcttcgtcg
     1141 cgcttcttgg cttgttggta tttgtattta ccgtaatcca tcagtttgca tacaggcggt
     1201 ttagcagttg gggaaatctc taccaaatcg acatcctgcc cttcggccat agccaaagct
     1261 tcacgaactg aaacgacacc aagctgttcg cctgactcac tgattaaacg cacttctttg
     1321 gcggtaattt cgccgttgat tcgtgcttcg cgttcttgag cgatgatgaa tactcctata
     1381 aaaattaatg attgacgagg gcatcagtga tttcttgctg caattgcgca atgaaatcat
     1441 ccaaatccaa agaacccaaa tcttctgctt tgcggcgtac cgccactttg ttttcctgct
     1501 tttctttatc gccgacaacg atttgataag gaaaacggta ttggctgttg tcgcggattt
     1561 tgtaaccgat tttttcgtta cgcaaatcca actcggcgcg gaatcctgcc gcctgcaatt
     1621 tggcagccac ttcacggcag taatccgctt gattttcggt gatattcata atcaccattt
     1681 gaaccggcgc cagccataac gggaaagagc ctgcatggtt ctcaatcaga atgccgataa
     1741 accgctccaa agaacccaaa atggcgcggt gcaacattac agggcgagcg cggtcattgt
     1801 tttcggttac atattctgca tccaagcgtt ccggtaagac gaaatctagt tgcaatgtac
     1861 cgcattgcca agaacgaccc aaggcatctt tgacgtgata ttcgatttta ggcccgtaaa
     1921 acgcaccttc gccaggcaac tcttcccact ctacgccaca agcggtcaat gcatcacgca
     1981 agccttgttc ggccttatcc caaacttcgt cagaacctgc acgttgttca gggcggaggg
     2041 acaacttcac agcaacatca tggaaaccga actgtttgta gatgcgaacc aacaattcat
     2101 tgaatgcgcg cgcttcgctg acgatttggt cttcggtaca gaaaatatgc gcatcatctt
     2161 gcacaaaacc gcgaacacgc atcagaccat gcaatgcacc gcttggttca ttgcggtggc
     2221 aagaaccgaa ctcggccaaa cgcatcggca aatcgcgata tgagcgcaaa ccgttattaa
     2281 aaatttgcac atgacccgga cagttcatcg gtttcaccgc gtattcgcgt ttttctgaac
     2341 tggtcacgaa catattgtct ttgtagttgt cccaatggcc ggatttttcc caaaaggttt
     2401 tatccataat ttgaggcgtt ttgacctctt tataaccggc ggcgttcagc tctttacgca
     2461 tatgctgttc aatcacttgc cacaaagccc agcctttagg atgccaaaac accatgcccg
     2521 gcgcttcgtc ttgcagatgg aacagatcca attgcttgcc aagtttgcgg tggtcgcgct
     2581 tttcggcttc ttcgatacgt tgaatatagg ctttcaactc gtcttttgtc gcccaagccg
     2641 taccgtatat gcgttgcagc atttcattgt tgctgtcgcc gcgccagtat gcgcccgcca
     2701 acttggtcag tttgaagttt ttcaggaaac gggtattcgg aacgtgcggt ccgcggcaca
     2761 tatcgacata ttcctgatga tgatacatcc ccatcgcttc cacttcgggc atatcgtcaa
     2821 tcaggcgcag tttgtattct tcgccgcgct cttgaaaaat tttaatcgcc tccgcacgcg
     2881 gagtcatgat tttgaccaca tcatagtctt gggcaatcaa ttctttcata cgcgcttcaa
     2941 tggcggcaac atcttccggt gtaaacggtt tttccgtggc gatgtcgtaa taaaagccct
     3001 cttcaatgac ggggccgata accatttttg cattaggata gagttgcttg acggcatgcc
     3061 cgacaagatg cgcgcaggaa tggcggatga tttcgatgcc ttcctgatct ttcggagtaa
     3121 tgatttggac gcttgaatct tcggtaatcg gatcgcacgc atcgaccaat ttgccgttta
     3181 ccttgcctgc cactgccgcc ttcgccaaac cggcaccgat agacgcagca atttgagcca
     3241 cggtaacggg ggattcgtat tggcggactg agccgtccgg caaggtaata ttcaacatca
     3301 aacgctccga aagattaaaa aataacggca taaatgccgt tatggggatt tggtaggcac
     3361 gattggattc gaaccaacga cccccaccat gtcaaggtgg tgctctaacc aactgagcta
     3421 cgtgccttca aagaattttt gcattttatc gggtcgtttt aatttttgca agaggtatgt
     3481 gcatttcttt atgcaacatt gtggcaagat ttggggatgt cgtctgaaaa accgtgggaa
     3541 ttcatttata atgccgtctt ttaaaacata tttcgccccc tgtcgcccaa ctgacattca
     3601 atcttatgct taaatttact ttacacaaaa aagacggata cgcccgacgc ggcacgctgg
     3661 agttgaacca cggcaaaatt gaaacgccgg tatttatgcc tgtcggtact tacggctcgg
     3721 ttaaggcgat gaacccgcaa aacctgcacg acatcaaggc gcaaattatt ttgggcaaca
     3781 cttatcattt gtggctgcgt ccgggtttgg aagttatcgg gcaattcggc ggcctgcacg
     3841 gttttatcgg ctgggacaaa ccgattttga ccgactcggg cggttttcag gttttttctt
     3901 tgtcggatat gcgcaagctg acggaagaag gctgtacgtt caaaagcccg attaacggcg
     3961 acaagctgtt tttatcgcct gaaatttcta tgaaaatcca aacggttttg aactcggaca
     4021 tcgcgatgca gttggacgaa tgcacgccgg gcgaggcgac gcgcgaacag gcgcgaaaat
     4081 cgctgcaaat gagcctgcgc tgggcggaac ggagcaaaaa agcctttgaa gatttgaaaa
     4141 acccgaacgc actgttcggc atcgtgcaag gcgcgatgta tgaggatttg cgcgaagaat
     4201 cgctgcgcgg tttggaacag tttgattttc ccggccttgc cgtcggcggt ttgtccgtcg
     4261 gcgaacccaa gcccgaaatg taccgtatgc tgcgcgccgt cggtccgatt ctgccggaac
     4321 acaagccgca ttacctgatg ggcgtaggca cgccggaaga cctcgtgtac ggcgtggcac
     4381 acggcatcga tatgttcgac tgcgtgatgc ccacccgcaa tgcacgcaac ggctggctgt
     4441 tcacccgttt cggcgatttg aaaatcaaaa acgccaaaca caagctcgac aagcgtccga
     4501 tagacgaaag ctgcacctgc tacgcctgcc aaaacttcag ccgcgcctac ctgcaccatc
     4561 tgcaccgcgc cggcgaaatc ttgggcgcac agctcaacac catccacaac ctgcatttct
     4621 accaagtcat tatggcggaa atgcgcgatg ccatagaaca aggcaaattt gccgactggc
     4681 aggcacaatt ccacgaaaac cgcgcacgcg gcacagactg attcccggca atgccgtctg
     4741 aagccgcttc agacggcatt ttgccgcttt accctacccg cactattttt cagaaaccga
     4801 tcatgcttcc attccttcca gaaccctccc tttcctatac gcaacaaaac cgtaccgccg
     4861 ttttgctgtt gaacctcggc acgcccgacg cgccgaccgc gcaggcggta cgaccttatc
     4921 tgaagtcctt tctgaccgac cggcgcgtcg tcgaactgcc caaatggctg tggtatccca
     4981 ttctgcatgg tctggtactg acgttgcgcc ccaaaaaaag cgcgcacgcc tatgaaaaaa
     5041 tctggtttaa ggaaggttcg cccctagaag tttacacagc acgccaagct gccgcgcttg
     5101 ccgaacgtat gcccgacctc atcgtccgcc acgccatgac ctacggcaat ccttcggtgg
     5161 cagacgtatt gtcggaactg aaggcgcaag gcgcgggcag actgctggtc atcccgatgt
     5221 acccgcaata tgccgcttcc agcagcggcg cggcagtaga taaggtgtgc gaacaattac
     5281 tgctgcaacg gaaccaaatg agcgtccgca ccgtttcgcg cttttatgac gataccggct
     5341 acattgatgc gatgaaaaac cacatcctcc gatattgggc ggaacacgga cgtgggaaaa
     5401 aactgatgtt gagttttcac ggcgtaccgc agaagcacta cgacctcggc gacccctatc
     5461 ccgacgagtg ccgccacacc gccaaactgc ttgccgaagc actggaactg accgaagacc
     5521 aatatgtcgt atcgttccaa agccaattcg gcagggcaaa atgggttaca ccgagcacgc
     5581 aggatttgtt cggcaaactg cccaaacagg gggtaaccga gctggacgta ttctgcccgg
     5641 gctttttggc agactgtttg gaaaccatgg aagaaatcgc cctgatgggg cgggaacagt
     5701 tttacgaagc aggcggcaaa agctaccgct acatcccctg cctcaacgac aaccccgact
     5761 ggatagacgc actcgtcgca cttgccgaag aaaaccttgg cggctggcgt tgaaactgtt
     5821 tgacccatgt ctaaaatgcc gtctgaacgc cgtgttcaga cggcattttc ccgctacttt
     5881 agcgtatgat ggcatctatg ccggacaaca acatcaagtg caaccttact accgattcgg
     5941 caaaaaaatc tttcacccgc tacgcaaaat caacaacaag gtttcaaaca ttaaggaaac
     6001 accaatgaac acaacccgac tgccgaccgc cctcgtcttg ggctgcctct gcgccgccgc
     6061 ttctgccgcc gacaacagca tcatgacaaa agggcaaaaa gtgtacgaat ccaactgcgt
     6121 cgcctgccac ggcaaaaagg gcgaaggccg cggaaccatg tttccgccgc tctaccgctc
     6181 cgacttcatc atgaaaaaac cgcaggtgct gctgcacagc atggtcaaag gcatcaacgg
     6241 tacaatcaaa gtcaacggca aaacctacaa cggattcatg cccgcaaccg ccatcagcga
     6301 tgcggacatt gccgccgtcg ccacttatat catgaacgcc tttgacaacg gcggcggaag
     6361 cgttaccgaa aaagacgtaa aacaggcaaa aggcaaaaaa aactaaacag acaaaatgcc
     6421 gtctgaaacc ggcaatccgg cttcagacgg cattcaaatc aaacctttct aacgcggtac
     6481 tttcagcccc atagacccga tattgccgcc accgtcaacc tccttcgcgg tcagcataaa
     6541 gccgccgatg tcaatacggc cgcactcgac cggctcctga ctgtcggaac gcttatcgaa
     6601 aagctcggca aggctcaaac cctcttcgcc cgcttccagc ctcaaaccgt aagcaagtgc
     6661 caaatcaccc gaacgtgctg ccggcgaaac gacaaactcg ccgaaaaaat caaaatgctc
     6721 acggacaccg atacccgtct cggtaaagta tttcgccatt ttatagtgaa
//
LOCUS       DAWEYF010000106         6712 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.106, whole genome shotgun sequence.
ACCESSION   DAWEYF010000106 DAWEYF010000000
VERSION     DAWEYF010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.106"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(43..810)
                     /locus_tag="WGN93_001491"
     CDS             complement(43..810)
                     /locus_tag="WGN93_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ0227386.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(898..1725)
                     /gene="mutM"
                     /locus_tag="WGN93_001492"
     CDS             complement(898..1725)
                     /gene="mutM"
                     /locus_tag="WGN93_001492"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ0227387.1"
                     /translation="MPELPEVETTLRGIAPRIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPRCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1777..2442)
                     /locus_tag="WGN93_001493"
     CDS             complement(1777..2442)
                     /locus_tag="WGN93_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEZ0227388.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGRWL
                     SLSEDVVCVPRDMSMSAENMALADVSVDMLLFPHTLEGGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRRLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPEWDGYLGGKALAAGAAR
                     VAD"
     gene            2621..4597
                     /locus_tag="WGN93_001494"
     CDS             2621..4597
                     /locus_tag="WGN93_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ0227389.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDIYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIVRLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSSQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4665..5357
                     /locus_tag="WGN93_001495"
     CDS             4665..5357
                     /locus_tag="WGN93_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HEZ0227390.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIRGGYVSINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMIAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
     gene            5854..6456
                     /locus_tag="WGN93_001496"
     CDS             5854..6456
                     /locus_tag="WGN93_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ0227391.1"
                     /translation="MPTLSQGLPNNYIYRENGVEFGLVQIRYPEHIELLHRWMNMPHV
                     IPQWQLNKSLSELSVYFEKMLADDHQRLYLVSINGEWVGYAEVYEGARDRLSGYYTAD
                     KNDLGWHLLLAEAQAVGKGYLRAIMRLLSFFIFEHSPAKKIVGEPDASVKPYEVVAQE
                     LNYMPQYQIVMPEKTAMLYFCDKEGFYCKFAHYLNASIKE"
     gene            6461..>6712
                     /locus_tag="WGN93_001497"
     CDS             6461..>6712
                     /locus_tag="WGN93_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227392.1"
                     /translation="MPIFLNAIQNPNSSLPVFLLDFSGEISQDAFDDWLIAMSDLLAS
                     EQSFALIYHSRTGLTLPNNYRQIEAVWYKTHKESFFKYCK"
BASE COUNT         1829 a         1974 c         1427 g         1482 t
ORIGIN      
        1 tccacaaaag cgaatcatac tgccacattc cgacaaccgg tttcagacgg caatatccgc
       61 atcgtcggcg acaacggcac ggatgctttc ttcgatttta tcttttaaag cataacggtc
      121 ttcgctttcc gccgcgtccg ccacgcaaac gaaatcgact tttatcgtta attttttcat
      181 agacacaatg cgccacagac aggtcggcaa accgacatcg gcatatgagg gacgagccgt
      241 cctttttccc gtttcgtcat aataacgcag cgcgaccgcc aaaacctttg cccccgcatc
      301 aatggcggat tggaacagcg cggctttgaa cggcaaaagc cccaatccgg aggaagtccg
      361 cgcttcgggg aaaaaactga cgttttgacc gcgttgcaag gtttcgcaga cggcgcggtt
      421 aatcggttcg atgtcgcgcc gcgaattgcg gttgatgaac accgttcccg cgttctgccc
      481 catcttgccc aataccggcc agcttttgat ttcctgcttg gcgataaagc tgctcggata
      541 aaccgcgctc atcgcgaaaa tatccagcca ggacacgtgg ttggcggcaa ccaagacacc
      601 gttcggatgt tcgggtgcgg gtctgcccac ctccaatccg atatccaaag ccgccaaaac
      661 ccccctgccc aactcgatta ccgcccgatt gcgcgactcg gggcaaccgc cgtcaatacc
      721 gcgcaggttt ttcccggttt tgaacagcca gaccgccaaa cggcacaagc ggcgcagacg
      781 tgtaaaaaat gaagctttat ttgaagacat gagcaattct ttcccgataa tcggtgtttg
      841 ttgttgaaac gttcggacgg cataccgata aaatgccgtc tgaaaccgtt ttcagtccta
      901 tttctgacag ttcgggcaat aaaacgtgcc gcgctgcccc aaagtttctt tcacaaccaa
      961 accgccgcac cgggggcacg gctgattgtg ccgcccgtac actgtatatt cctgttggaa
     1021 gtagccgctt ttgccgtcgc tgtccacaaa atccctcaag gtactgccgc ccgtttcaat
     1081 ggcgcgctgc aacaccgctt tgacggtttc aaccaaaagc gcgcactctt tctttttcag
     1141 gcggttggca ggacggtggg gcgaaatgcc cgctctgaac aggctctcgt tggcataaat
     1201 gttgcccaca ccgaccacga ccgcattgtc catcagggca agtttgaccg cgcgcttctg
     1261 cgccttcagc cttgcataca gataatccgc acaaaatgcc tccgacaaag gctccggccc
     1321 cagtttttcc aacagcggat gatgttcttc gattccctca taccaaagta tcgcgccgaa
     1381 ctttctcgga tcgcggtaac gcatgaccgt gccgtctgaa aacacaatat cgacgtgatc
     1441 gtgtctgtcc ggcctgccga tacgtccgtc cgacggcgta aaaatccgca agctgcccga
     1501 catccccaag tgaatcagca aaatccccgt ttggaaacgg acaatcagat acttcgcccg
     1561 cctgccgcag gacaacacct gccggccgga caaaatctcc cccaaatcgg gattaatctg
     1621 ccagcgcagc ttcaattggc gcaataccac ggcttccacc gttttccctt caatacgcgg
     1681 cgcgatgccg cgcaacgtcg tttccacttc cggcaattca ggcataaccc ctcccgacat
     1741 ttcttctgac agatgccgtc tgaaagacgg ctgtccctaa tccgcaaccc ttgccgcacc
     1801 cgccgcaagg gctttgccgc ccaaataccc gtcccactcg ggcaggggcg ttacgcccgc
     1861 cgcccttttg accaaaacca aaccgtacac tgcggcacac tgcggccacc aacggtcgcc
     1921 cgccttttcc ataaaccgcc aaaagcgtat ttgcccgagc gacgaaacgg gcggcagata
     1981 caccataaat ttcccaaatt caatatcgaa accggcatcg gcaagccgcc ttttcaactc
     2041 gggcaacggc agacaaaacc gtttttccgg caggcgttcg ccgtcaaacc aacggctgaa
     2101 tccccagagc gaatacggat tgaaacccgt cagcatcaaa cgtccggacg gtttcaatat
     2161 ccggtgcgcc tcggacagga tttgcgaagg aacaccgcct tccaaagtat gcgggaaaag
     2221 cagcatatcc acagaaacat ccgccaaagc catattttcc gccgacatcg acatatctcg
     2281 cggcacacag acaacatctt cagacaggct cagccacctg ccgcccacct gaaccgcaca
     2341 cattcccgaa aaacggtatg aatccagata ccgcccgaag aaatcctgtt ccaattttgc
     2401 aacataccgc cccatcgccg tatcttcaaa ccatgcatcc atattgcgtc cgtttcaaac
     2461 agattgcctg ccgatattct attccaaaca ggatttctgt caaaaaacac atcggccgcc
     2521 catttccgaa tccgcataaa gttcctgtaa aacttgacgc tttttcagtc aaacagtacc
     2581 atcggacgat aaaatatgtt tattccgccg aatataaatc atgtccaaac tcaaaaccat
     2641 cgctctgacc gcatcaggtc tgtccgtttg tccgggtttc ctatacgccc aaaacacctc
     2701 atcacaccaa atcggtttgg cgattatgcg cttaaactct tcaatactcg acctgccccc
     2761 gacaaaacaa tatttccaat ccggcagcct gtggagcgag ctgcgccaag gcttccggat
     2821 gggcgaagtc aatcccgaac tggtacgccg ccacgaaagc aaattcatcg caagccacag
     2881 ctatttcaac agggtcatca accggagtag accctatatg taccatatcg ccaacgaagt
     2941 caaaaaacgc aatatgcccg ccgaagccgc cctgcttccc ttcatcgaaa gcgcgttcgt
     3001 caccaaagcc aaatcacacg tcggcgcatc aggattatgg cagtttatgc ccgctaccgg
     3061 caggcattac ggcctggaaa aaacaccggt ttacgacggc aggcacgaca tttacgccgc
     3121 caccgatgcc gcactcaact atctgcaata cctctatgga ctgttcggcg actggccgct
     3181 cgcctttgcc gcctacaact ggggtgaagg caacgtcgga cgcgccatca accgcgcccg
     3241 cgcccaaggg ctcgaaccga cctacgaaaa cctgcgtatg cccaacgaaa cgcgcaacta
     3301 tgtccccaag ctgctcgccg tgcgcaacat tattgccact ccccaatctt tcggcatgaa
     3361 tatcagcgac atagacaaca aaccctattt tcaggcagtc gaaccggatc gtccgctcga
     3421 caacgaagcc atcgtccggc ttgccggcat cacgcaaagc gagctgctcg ccctaaaccc
     3481 cgcattcaac gtccccgcgt ttatccccaa aagcaaacgc aaactgctgc ttcctgtcgc
     3541 gtccgtacaa accttccaaa gcaactacct caacgccgca cccgacagcc tgttttcatg
     3601 ggaagtctat acgcctgccg ccaaaaccag cctgtccgac atctcgacgg caaccggcat
     3661 gagcattgcc gacatcaaac gcctcaacaa cctgaacggc aaccttgtca acgcaggacg
     3721 cagcatcctt gtcgccaaga acggcaaaac ccttcagacg gcatcggaat ccgtcgtttc
     3781 catcgacatc gacaatacgc ccgacaccta ccgttccaat atgccggcag gcacggtgaa
     3841 cgtcggcatt gcccgaatcc gacccgccgc cgcacagaca gcggacatta ccgtcgcacc
     3901 tttgccgcag aaaaccgtcc gtacggaacc cgatcccctt gtccgcattg ccgaacctgc
     3961 ccttgcgaca gccgcagcgc aacctcaaac cgaaaaacag accgccatgc cgtctgaaac
     4021 ccaaaccgca acactcgcgc agatcatccc ccaaaacgac atgcaggcgg cagacgaact
     4081 catgcagctt gttgcccgaa acaacctgcg ccgacaggct gaagaaacca tctccgccgt
     4141 catcggcacg cctgacacag ttgccgaaca caacatttcc tcatcttcgc aacataccgt
     4201 tgccgccgac ggcaaacgcc gggcacgttt ggaaacgcgc gtagccaaag ctgccgacgg
     4261 cgaagccgaa atctccccgc tccatgccag catccaccgc gttgtagaag gcgacaccct
     4321 gttcaacatt gccaaacgct acaacgtcag tgtagccgac ctgattgtcg ccaacaacat
     4381 caaaggcaac accatccaaa aaggacaggt actccgcctg gcgcaggcag cccctgccca
     4441 aacccgtatt gaaaaagtat cctacaccgc gcgcaaaggc gacaccttca aaagtatcgc
     4501 cgcgcgcttc aatatccata tcgacgacat ccgccggctc aatcccaacc tgaacaccat
     4561 caatccagga cagagggtta aactgattgg aagctgattc ggatacggca catgacagga
     4621 ctttctcagt cctgtctttt tcatcccaca tttcccatac catcatgaaa ctcatcaaat
     4681 acctgcaata tcaaggcata ggaagccgaa agcagtgcca atggctgatt aggggcggct
     4741 acgtctccat caacggaacc tgtatggacg acaccgatgc agacatcgat tcctcatccg
     4801 tcgaaacgtt ggatattgac ggggaagcag taaccgtcgt tcccgaaccc tatttctaca
     4861 tcatgctcaa caagcctgaa gattacgaaa cttcgcacaa acccaagcac taccgcagcg
     4921 tattcagcct gttccccgac aatatgcgga acatcgatat gcaggcggtc ggcaggctgg
     4981 atgcggatac gaccggcgta ttgctgatta ccaacgacgg caaactgaac cacaacctga
     5041 cttcgccgag cagaaaaatt cccaagctat acgaagtaac gctcaaacac cccacaggag
     5101 aaacgctctg cgaaaccttg aaaaacggcg tgctgctcca cgacgaaaac gaaaccgttt
     5161 gcgccgctga tgccgttttg gaaaacccga ccaccctgct gctgaccatt accgaaggga
     5221 aataccacca agtcaaacgc atgatcgccg ccgccggcaa ccgcgtgcaa caccttcatc
     5281 gccggcgatt cgcacatctg gaaacagaaa acctcaaacc cggggaatgg aaatttatcg
     5341 aatgtccaaa attctgaaat aacatccaag aattccattt atattcatcc acatactcat
     5401 taaatatatg gtttaaccca atttaacgca aaaaatcaat taatgagtta tcaaagatta
     5461 ttgatgaatt tcaccatcaa catccagagc taaatgagag gattgcttta tttgatttaa
     5521 aaagaccaaa atttgaaaag gtgtgcctaa atcgtgttcg cttttttaca agaggttatc
     5581 aagataacgc caaccgtcca gaacccgtgg tttgcgaacc aatttgcaat ccaatatcac
     5641 cacagtttct aaggtgtgtt gaacattgat aacattattt gtaaaaatga tgaaaatttt
     5701 aacgctttta ttagtttttg catgaaaaac gtgcgatttt tctcattttt cattgcaaat
     5761 accaaatatt caacacaccc taatgagaga atagaaatgc tagaaatcta taccgattct
     5821 tttaatcaag atcaatgcag taaaatcaat cgattgccaa ctttatctca ggggttgcca
     5881 aacaactata tttacagaga aaatggggtt gaatttgggt tggtgcaaat acgctaccct
     5941 gaacatattg aattgttgca tcgttggatg aatatgcccc atgttatccc tcaatggcaa
     6001 ctcaataaat cattgtctga gctgtctgtt tattttgaaa aaatgttggc tgatgatcac
     6061 cagcgtttgt atttggttag tattaatggc gaatgggttg gttacgccga agtttatgaa
     6121 ggggcaaggg atagactatc agggtattat acagctgaca aaaatgattt gggttggcat
     6181 ttgttactag cagaggcaca ggctgttggc aaagggtact tgcgtgccat catgcgtcta
     6241 ctaagctttt ttatttttga acattcacct gctaaaaaaa ttgtgggtga acctgatgca
     6301 agtgtaaaac cctatgaggt agtcgctcaa gaattaaact atatgcccca atatcaaatt
     6361 gtaatgcctg aaaaaactgc aatgttatat ttttgtgaca aagaagggtt ttattgtaag
     6421 tttgcccatt atttaaatgc cagcattaaa gagtgatgtt atgcctattt ttctaaatgc
     6481 tattcagaac ccaaatagct ccttacctgt atttttactc gatttttcag gcgagattag
     6541 tcaagatgca tttgatgatt ggttgattgc tatgagtgat ttgttagcca gtgagcagag
     6601 ttttgccttg atttaccata gtcggacagg gctgacactc cctaataact accgccagat
     6661 tgaggcggtt tggtacaaga cgcacaaaga atcgttcttt aaatattgca ag
//
LOCUS       DAWEYF010000107         6681 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.107, whole genome shotgun sequence.
ACCESSION   DAWEYF010000107 DAWEYF010000000
VERSION     DAWEYF010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6681
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.107"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(101..1234)
                     /gene="nrdB"
                     /locus_tag="WGN93_001498"
     CDS             complement(101..1234)
                     /gene="nrdB"
                     /locus_tag="WGN93_001498"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ0227393.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1295..2482)
                     /locus_tag="WGN93_001499"
     CDS             complement(1295..2482)
                     /locus_tag="WGN93_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ0227394.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(2475..3488)
                     /gene="dcm"
                     /locus_tag="WGN93_001500"
     CDS             complement(2475..3488)
                     /gene="dcm"
                     /locus_tag="WGN93_001500"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ0227395.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            complement(3546..5825)
                     /gene="nrdA"
                     /locus_tag="WGN93_001501"
     CDS             complement(3546..5825)
                     /gene="nrdA"
                     /locus_tag="WGN93_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ0227396.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTSQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPCVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            6354..6665
                     /locus_tag="WGN93_001502"
     CDS             6354..6665
                     /locus_tag="WGN93_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ0227397.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         1784 a         1493 c         1420 g         1984 t
ORIGIN      
        1 aaggaacaat aaccgatcct acccgctgtt tttcccatca tacaacatac aaatgccgtc
       61 tgaaacatcc ggcttcagac ggcatttttt caaaaaacgt ttacaactca aaatcgccca
      121 aatcatccgt attcacttca gaatcgatct gaccgatcaa ataagaggat atttccactt
      181 cctgcggcgc gacctgtacg ttatcggacg acagccacgc attaatccac ggaatcgggt
      241 tttgatttgc gccttcaaat ccggccggca accccaccgc ctgcatacgc agattggtaa
      301 tatattcgac gtattgggat aagatttctt tgttcaaacc gatcatcgaa ccgtctttaa
      361 acaaatatgc cgcccattct ttttcctgtt ccgccgcttt tttgaagagt tggaaacatt
      421 cgtcctgcaa ctcagcggca atttctgcca tttcagaatc atcgacaccc gaacgcatca
      481 gattaagcat atgctgcgtg ccggtcaggt gcagggcttc gtcgcgggca atcagtttga
      541 tgattttggc gttgccttcc atcaactcgc gctcggcaaa agcaaacgag caggcgaatg
      601 aaacgtagaa acggatggct tccaacacgt tgacgcacat caggcagaga tagagttttt
      661 tcttcaaccc gcgcaaagac acagtaatgg gttttccgcc gacattgtgc accccttcgc
      721 ccaacagatt gtaatactgg gtgtattcga ttaagtcatc gtaatagcag gcaatgtctt
      781 cggcgcgggc ggtaatgtat tcgttttcga caatatcatc aaacacgacc gacggatcat
      841 tcacaatatt gcggatgatg tgggtatagc tgcgcgagtg gatggtttcg ctgaagctcc
      901 acgtttcaat ccacgtttcc aactcgggaa tcgaaaccaa aggcagcaaa gcaacattcg
      961 gactgcgccc ttggatggaa tcgagcagtg tttggtattt cagattgctg atgaaaatat
     1021 gtttttcgtg ttcaggcagg ttggcgtagt cgatacggtc gcgcgacacg tcgatttctt
     1081 ccggccgcca aaaaaacgac aattgttttt caatcagttt ttcaaatacc tcgtatttct
     1141 gctggtcata acgggcgaca ttcacaggct gaccaaaaaa catcggctca ttcagcgcgt
     1201 cgtttttggt tttgggaaag gtgctgtatg acatgactag gtgttcgcag gacataatct
     1261 attctctata ttaattaaaa atgatctgta agttttaact aacctgctga gactttatat
     1321 atttaataaa attttctaaa gttaaaacat gggttttccc aaaagttcca aatgttttta
     1381 cggattcttt agggacaact aaggttaaat tctcatcact catttcctga atttgagtat
     1441 cagatatacc ttcttgtaga gtaaataaat gcttatgagg aattcgatct gcttcattta
     1501 aaacttggcg ccagcgatcc ttacaagtag tctttgaacc tagcattgtc agcttttcag
     1561 tttgaaatat gaaattccct gattcatcca tcgcatggta ctcttcactt ccaggaaata
     1621 aaaaatctgg tttctttttc ccttctgtct tcgcttgcgt ctcaaatttt aaggaaaatt
     1681 cgtcaaatat tcttgataaa tgtaactcta aagattttcc tgctcttgct tttctgcgat
     1741 ttgtaaaaga atgtgcaaaa ttaatgaagc tatccaaatc agtaattttt gatttaataa
     1801 tttcaaattc acgtttttca aaaatggaaa ataattcata ttcctttgaa acccattgtt
     1861 ttaacacatt actaacgtta gttttattta atgcaatatt ttcccttgcc aaaactgcca
     1921 tttcttcagt tttggggaag ttaggaaata gtgaaaataa ttttgttagg ttatcctcta
     1981 cttcttgttt tttaggtaaa tataaacttc ctggtaaaat gttagtttct gcgataaata
     2041 tttcaatatc ttcatctgaa gataaaacaa aagcatggaa taataaatct ttataacaag
     2101 ctctgcacaa taccaataag gaaccactat atttatcact taaaaattca aaattcttgc
     2161 caaaacccgt aattctcgcc tcatttctcg tgccttggcc gtaatattta aaattgctat
     2221 tagtgacgct tccatcttgc caattaattt tgattgaaat agttttattt gttccctttt
     2281 ggcaaactac atcaaagagg tcgtctgaaa aatgtttttg aatataaaat cctgattggt
     2341 gactaccagt agtaccaaca tcattgggac gaatataacg acagtatact gcaattgatt
     2401 tatttgctgt ctgtattgct gaagctacta agtcatcgga tttatttact acttgtattg
     2461 tctgagctgc caagtcattc attttttaac tcatttataa tttgtttagc aatagcttga
     2521 accaacggta cagcaattga attgccaaac tgcttgtatg cagctgtctt ggatactgca
     2581 tcaataacaa aatctttagg aaatcccatt aaacgcgagc actccctagg tgtcagcttc
     2641 ctaggatttt ttcctttctg agggatgagt atttcggaac catctttgta atatcgtgca
     2701 gatagagttc gtgatattcc atctaaatca actaatccaa aaccaaatcc attacccttt
     2761 gccttatgtt ttttagcgta attttgaagg taaagccata agttatcaga aagagtaaaa
     2821 gaattatcta catcatcttc caaaatttgc tttaattttg gttgtgattc tggtggggaa
     2881 ggaaaattga aatttatttc cttattaaaa tattgtctat caaaacctac aataaaaata
     2941 cgctccctat tttgaggaac ataatatttt gcattcataa cttgataaaa tatctgatag
     3001 tcaagctctt ctaaagtccc tttaattact ttaaatgtat ttcctttgtc atgcgaaaca
     3061 aggtttttca cattctctaa aagaaaaatt ttaggtcgat gttttccaat aatttcagca
     3121 acatcaaaaa atagagttcc ctgcgcctta tctaagaagc ctgtttctcg tcctaggctt
     3181 tttttctttg aaacaccagc tatagagaat ggctgacacg ggaatcctgc tgttaataca
     3241 tcaaacttac ttggaatagc tgctttggtt tcctttaatg taatatctcc ataaggaata
     3301 tcattaaaat ttacttggta ggtttgacgg gctttatcat cccattcact agaaaataca
     3361 catcgcccac caacattctc cattgcaatg cgaaaaccac ctattcccgc aaataaatca
     3421 ataaaagtaa atttctcatt atttaaggta actatattat ctaattgatt ttgtatttta
     3481 tttttcatat tttatatttc agatgattta ttaatctaaa ggccatctga aaactccccc
     3541 tttcatcaaa tcttacaagc cccgcccgcg cagccgtcat cctgaatatc ggtctgcgta
     3601 tcgtccgcac cgtcgcgggt gttatggtag tacagggttt tgacgccgta tttgtaggcg
     3661 gtcagcaggt ctttgagcat ttgtttcata gaaactttgc cgccttcgaa tttgcccggg
     3721 tcgtaggcgg tattggcgga aatcgattga tcgacgaatt tttgcatcac gccgacaagt
     3781 ttcaggtagc cttcgttgcc gggaagctgc cacagggttt cataggcatt tttcagggtt
     3841 tcaaactccg gcacgacttg tttcaaaatg ccgtctttcg atgctttgac cgttaccaat
     3901 ccgcgcggcg gctcgatgcc gttggtggcg ttggcgattt gcgaactggt ttcagacggc
     3961 atgagcgcgg tcagggtgga gttacgcagg ccgtatttga cgatgtcggc acgcaggctt
     4021 tcccagtcgt aatgcaaagg ctcgccgcag acggcatcca aatctttttt gtaagtgtcg
     4081 atgggcagtt tgccttgcga ataaacggtt tggttaaaga gcgtgcacgc accgtattct
     4141 ttggcaaggt ttgccgatgc tttgagcagg taatactgta tggcttcaaa ggtacggtgg
     4201 gtcagaccga gcgcggagcc gtcgctgtag cggacaccgt ttttcgccag ataataagca
     4261 tagttaatca cgccgatgcc gagcgaacgg cgacccatag tagaggtacg cgcggcttct
     4321 accggatatc cctgataatc taaaagtgca tcgagcgcac gcacggtcaa gtcggcaagc
     4381 ccttccaatt cgtccaagct gtttaatgcg cccaagttaa aggcagacag tgtacacagg
     4441 gcgatttcgc cgttcggatc gttgatattg tccagcggtt tggtcggcag ggcgatttcc
     4501 atacacaagt tggactgatg aacaggcgcg acgcacggat cgaacgggct gtgcgtattg
     4561 cagtgatcga cgttttgaat gtagatgcgc ccggtcccgg cacgctcctg catcagcgtg
     4621 gaaaacaggt cggcagccgg aatgatacgc ttgcgtatgt tcgggtcttg ctcgtatttc
     4681 gtatagagcc gctcaaattc gtcttggtcg gcaaaaaacg cttcgtacaa ccccggaacc
     4741 tcgttgggcg aaaacagcgt aatgttgccg cccttaatca ggcgggtgta cagcaggcgg
     4801 ttgatttgca cgccgtaatc aagctgacgg atacggttgt cttccacacc gcggttgttt
     4861 ttcaacacca gcaggctttc ggcttcgata tgccacaagg ggtagaacaa agttgccgct
     4921 ccgccgcgca cgccgccttg cgaacaggat ttgaccgccg cctgaaacat tttgaaaaac
     4981 ggaatgcagc cggtatgccg cgcttcgccg ccccggattt cgctgtccaa accgcggata
     5041 cgtccggcat tgatgccgat gcccgcacgc tgggaaacgt atttcacaat cgcgctggtg
     5101 gtggcgttga tggaatccag gctgtcgtcg cattcgatca gtacgcagct tgagaactgg
     5161 cgcgtaggcg tacgcacgcc gctcataatc ggggtcggca gcgatacttt aaatgtggaa
     5221 acggcatcgt aaaaccgttt gacgtaatcg aggcgtgttt ctttgggata tttgctgaaa
     5281 agacacatcg ccaccagaac atataagaac tgcggtgttt cataaatctg gctggtaacg
     5341 cggttctgta ccagatattt gccttcgagc tgtttgacag cggcatagga aaaggacata
     5401 tcgcgttcgt ggtcgatata ggcgttcagt tcatcaaatt cttcgcggct gtaatcctca
     5461 aggatatgcc tgtcgtattt tccggcatcg gtgagctttt taacgtggtc gtaaaggtgc
     5521 ggcggctcgt attcgccgta ggctatttta cgcagatgga aaatcgccaa acgcgcggca
     5581 aggtattggt agtccggagt atcttccgaa attaaatcgg cagcggcctt gatgatggtt
     5641 tcgtggatgt cgtcggtgcg gatgccgttg tagaactgga tgtgcgattt caactcgacc
     5701 tgcgacacgg aaacattttc caatccttcc gccgcccaag taacgacacg gtgaatctta
     5761 tccaaatcaa tggcttctaa tcttccgtct cgtttggtta ctttcaaatc agtcggtgta
     5821 ttcatcgctt cctcttccac tcttgatatt caagacacgg tcttttcaaa caaattaaga
     5881 cagacaatat agtggatttt tggcattttc tccagtcttg acaacggttg catttttcag
     5941 tttcaggcaa tgcgcgataa aacccgcctg tcgtattttt cctataatat ttgttttatc
     6001 tgataattct ttaccgataa aaaacgggta aattttttgc cttttgaccg gctccggcta
     6061 caaggcggtg aaataaggat tttccgacga aaaaggaaag cttccggttt tctgcccctg
     6121 cgaattgtta aattttgcaa agtatgattt tgccgcgccg ccgccgacaa attccatttt
     6181 cttaccgatt gaaatttatt attgagatta atgtgttatt tgaatccgca tatcaaacgg
     6241 caagttttgt cggctgaatg agtctgaaac tgccgacaat ttgcccgttc catccttcca
     6301 tcctatactg gaaggaatga caaactgaaa ggatcgtcat atctgtcaaa aagatgcttg
     6361 ccatactgtt gtctgcaata ttgggactgg tatcgacaac tgccgctgcc ggtacgtcag
     6421 aacccgccca ccgccatacc aaacatatcc gcaaggcaaa caagcagatg ctgcaccccg
     6481 aatgcaggaa atatttggaa cgccgtgccg cgtggtaccg atcgcaaggc aacgtgcagg
     6541 aattgcgcga aaacaaaaag gcgcgcaaag cattccgctc cctgccttat gcggaacaga
     6601 aaatccaatg ccgggcggct tatgaggctt tcgatgattt cgacggcggc agtttccgcc
     6661 gttaatccca tataaaatat g
//
LOCUS       DAWEYF010000108         6645 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.108, whole genome shotgun sequence.
ACCESSION   DAWEYF010000108 DAWEYF010000000
VERSION     DAWEYF010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6645
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.108"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            716..2164
                     /gene="gnd"
                     /locus_tag="WGN93_001503"
     CDS             716..2164
                     /gene="gnd"
                     /locus_tag="WGN93_001503"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ0227398.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFIEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2227..3498
                     /gene="waaA"
                     /locus_tag="WGN93_001504"
     CDS             2227..3498
                     /gene="waaA"
                     /locus_tag="WGN93_001504"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ0227399.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRGERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGVLMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKTLSSEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3539..3988
                     /locus_tag="WGN93_001505"
     CDS             3539..3988
                     /locus_tag="WGN93_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ0227400.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSREARRE
                     VEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            4021..4995
                     /locus_tag="WGN93_001506"
     CDS             4021..4995
                     /locus_tag="WGN93_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ0227401.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNSSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFKLAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEGDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFVFLKYGLA
                     FVLGFIGVKMLIMHWVHIPISVSLSVVFGALGASVLTSLVYTKKQSDK"
     gene            5064..5139
                     /locus_tag="WGN93_001507"
     tRNA            5064..5139
                     /locus_tag="WGN93_001507"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5097..5099,aa:Lys,seq:ttt)
     gene            5358..6611
                     /gene="murA"
                     /locus_tag="WGN93_001508"
     CDS             5358..6611
                     /gene="murA"
                     /locus_tag="WGN93_001508"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ0227402.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMVVEGA
                     GELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
BASE COUNT         1522 a         1616 c         1930 g         1577 t
ORIGIN      
        1 agagcggttt ctgttttttc cgataaatgc cgcaatctca aatcccgtca ttcccacgaa
       61 agtgggaatg acggaatgta ggttcgtggg aatgacgcgg tacaggtttc cgttacgtat
      121 ccccatccga aagtttattt atacacaagc aatccaaagt tatctgactg aaatattgtg
      181 agatttaccc gcaaatctca ttttttccac cacttataca caaattcgga tgcgcactct
      241 gccgatttgc agaaataaga cattcgtgcc gacacctgac catttccaca agttccaaac
      301 acgcttccgg cttaaatctc cacagcattc ccgttcttaa aggcaccggc agccattcgg
      361 taaagaaaag taggatgcca tctgcacaac aagcaaacta tccacaaaac ttattcccca
      421 taaaaaacaa tccacaggta tgcacaaaag ggaatccgcc ttaccgacac cctaaaaaaa
      481 ggtaatcctg atgattttta aaataaaaaa aagttaccca cagaaaattt ctcctatcaa
      541 tataatcatc gtttttttat ttaattttta tattttattt ataagccttc agggaaacgc
      601 acggtaaagc gtaaaggcat cttttcaaaa aattaaaaag ttaaggattg ttaaacaagt
      661 gtaaatcagg tagagttgcg gtcgataaat taaatctata acggagcttc ctgcaatgaa
      721 aggcgatatt ggcgtaatcg gtttggcggt tatggggcaa aacctgattt tgaatatgaa
      781 cgattgcgga tttaaggtgg ttgcctacaa ccgaacaatc ggtaaggtgg acgaattttt
      841 aaacggcgcg gctaagggaa cggatattgt cggcgcgtat tccctgcaag acttggtcga
      901 taagctggca aaaccgagaa aaatcatgat gatggttcgc gcaggttcgg tcgtcgacga
      961 ctttatcgaa caactgcttc cgttgttgga agaaggcgac atcattatcg acggcggcaa
     1021 tgccaattac cccgacacga cacggcggac acattacctt gccgaaaaag ggattttgtt
     1081 tgtcggggcg ggcgtatccg gcggcgaaga aggcgcgcgg cacggcccgt ccattatgcc
     1141 gggcggggat aagcgcgctt gggaagccgt caaaccgatt tttcaggcga ttgccgccaa
     1201 aacgccgcag ggcgaaccgt gttgtgactg ggtcggcagg gacggcgcgg ggcattttgt
     1261 caaaatggtg cataacggca tcgaatacgg cgatatgcag ttgatttgcg aagcgtacca
     1321 gtttatgaaa gacggcttgg ggctgtctta cgacgaaatg caccgcgtgt ttgccgagtg
     1381 gaacaaaacc gagctggatt cttatctgat tgaaatcact gcggcaattt tgggctataa
     1441 ggacgaaggc ggcgaaccgc tggtcgagaa aatcctcgat acggcagggc aaaaaggcac
     1501 gggcaaatgg acgggcatca atgctttgga tttgggtatt ccgctgacgc tgatttccga
     1561 agcggtattc gcccgctgcg tttcgtcgtt catagaacag cgcgtgcaga ccggcaagct
     1621 gttcgcccga accgttacgc ccgtcgaagg cggcaaacaa gaatgggtcg aggcgttgag
     1681 acaggccctg cttgcatcta aaatcatttc ctacgcacaa ggctttatgc tgatccgcga
     1741 agcgggcgaa agctacggct gggatttgga ctacggcaac actgcgctgc tgtggcgcga
     1801 ggggtgcatc attcgcagcg cattcttaag caatatccgc gacgcgtatg aaaacaatcc
     1861 cgatttggtg ttcttgggtg cggatccgta tttcaaaaat attttggaaa actgcctgcc
     1921 ggcgtggcgc aaggtggttg ccaaggcggt cgaatgcggc atccctatgc cctgcatggc
     1981 atcggcgatt acgttcttgg acggctacac gaccgaacgt ctgcctgcca acctcttgca
     2041 ggcacagcgc gactacttcg gcgcgcacac gtacgaacgc accgacaaac cgcgcggcga
     2101 gtttttccat accaactgga cgggcaaggg cggagatacc gcttcgacaa cctacgatat
     2161 ttgattccgt tgccgaaatg ccgtccgaac cgttcggacg gcatttgttt tgcaggaaat
     2221 agaaagatgt tccaatggct ttatgatgta ttgtggctgc ttgcgccgat atggatacgg
     2281 cgttatttgg acaaacgctc cggaagtgcc ccggcatatc gggcgcatcg gggcgagcgt
     2341 ttcggcaagc cgtatccgaa tcccgttacc ggcgcggttt ggatacacgc cgtttcggtc
     2401 ggggaaacgc gtgccgccca acctttgata cgcgagttgc ggcagcgttt tcccgatgcg
     2461 ccgctgctga tgacgcagat gaccccgacg ggacgggaaa ccgcgcaagt tctgtttccc
     2521 gatgcgcaat gccgctatct tccgtatgac aaaaaaacgt gggtacggca gtttttgcgc
     2581 gaacaccgcc cgatgttcgg cgtattgatg gaaacggaaa tctggcccaa cctaatgaag
     2641 gaatgccggc gcgcgggtgt gccgctgttt ttggcgaatg cgcggctgtc ggaaaaatcg
     2701 ttgaacggtt atctgaaagt ccgccgcctg atccgtcctg ccgccgcttc gctgacgggt
     2761 tgtctggcgc agacggaggc ggatgcggcg cggttggcga aattgggcgc ggcatccgtg
     2821 caggtgtgcg gcaataccaa atacgacctg atgccgtcgg aacagatgaa aacgctggcg
     2881 gggcagtttg aaaaacgcat cggaggccgg ccggttgccg tgtgcggcag cacgcgcgtt
     2941 tatcggggcg aagacgaggc ggaaaaactg ctggcggcgt ggcaacaata tcgcggcgat
     3001 gcgctgctgg tcgtcgtgcc gcgccatccc gagcattttc agacggtatt tgaaacggca
     3061 aaacgcttcg ggtttaaggt tcagcggcgc agcgacggtt tgccggtcga acctgatacg
     3121 caggtgtgga taggcgacag tatgggcgag ctgtatgcgt attacctgtg cgccgatgtt
     3181 gcttttgtcg gcggcagtct ggtcgattcg ggctgtcaga acatcatcga accgctttcc
     3241 tgcggcgttc cgacgatatt cggcttttcg acctacaatt tttccgaagc ctgccggcac
     3301 gccttggcat cgggtgcggc ggttcaagtc gaatcggcgg atgcgtggcg tgaagccgtt
     3361 gaaaaaacct tatcgtccga ggggggcgga atgcagatgc aggcgcgcgt ggacggcttt
     3421 atcgcacaac atcgcggagc gggcgcgaga atcgccgagg cggtgcggga agcggtatgc
     3481 ggacatcggg ggcgatagtg atacaatccg tatccgagtt ttccggttgg agtaccgtat
     3541 gagtatttat gccgtcgcgc acatcgtcca cctgtattgc gccattgcct ttgtcggcgg
     3601 cgtgtttttt gaagtgctgg ttttgtccgt cctgcatacg ggacgggtgt cgcgcgaggc
     3661 gcggcgcgaa gtggaaaagg caatgtctta ccgcgccgtc agggtgatgc cgtttgtggt
     3721 cggactgctg ttcgccagcg gcatcgtgat ggcggcaaac cgctatcttt ctatattggg
     3781 cgaaccgttt gccacttcct tcggtacgat gctgacgctg aaaatcctgt tggcgttcag
     3841 cgtgttggcg cacttcgcca tcgccgtcgt caaaatggcg cgttccacac tgaccgtcgg
     3901 ctggtcgaaa tacatacaca ccgtcgtctt tacccatatg ctgctgattg tctttttggc
     3961 aaaagcgatg ttttatatca gctggtaaca caactacatt tcaaatcagg agattgaacc
     4021 atgacagaat atcccggcat cgggtcgccg ttgttttacg gcgttttttt tgcggcagtg
     4081 ctggtcatga ttgccttgga tatgttttcg ctgaagaaaa acagcagcca taaagtcggc
     4141 gtcaaagaag ccttggcatg gagcggcttg tgggttgccg tatcctgcct gttcgcaggc
     4201 tggctgtatt tcaaactcgc cggcaatccc ggctacggcg cggcagtcgc aaaagaaaaa
     4261 gtattggaat tctttaccgg ctacattttg gaaaaatcgt tggcagtcga caatattttc
     4321 gtgttcctga tgatattcgg ctacttcaaa gtcgcaccgc agtttcagca ccgcgtgctg
     4381 ctgtacggcg tattgggcgc attggtattg cgcactgtca tgattttcgt cggcgcggca
     4441 ctggttcagc agttcgagtg gattctgtat ctgttcggcg cgttcctgct ctataccggc
     4501 atacacatga tgaagcccga aggcgatgag gaaggggatt tggcaaacag caggctgctg
     4561 aatgccgtca agaaagtcgt tccggtcggc acggaatttc acggcgagaa attttttact
     4621 gtcgaaaacg gtaaaaaaat cgccacgccg ctgtttttgg tgctggtcat gattgaattg
     4681 agcgatgtcg tttttgccgt ggacagcatc cccgccgtct ttgccgttac caccgatccg
     4741 tttatcgtgc tgacttccaa tattttcgca attctgggct tgcgggcgat gtatttcctg
     4801 ctggcggatg tggcggaacg cttcgtattc ctgaaatacg gcttggcatt cgtgttgggt
     4861 tttatcggtg tgaaaatgct gataatgcat tgggtgcata tcccgatttc cgtttcgctg
     4921 tcggtcgtgt tcggcgcatt gggtgcatcg gtgttgactt cattggttta tacgaaaaaa
     4981 cagtccgata aataaaatgc cgtctcaacg ccgacaaaat ggttgacagc atcaggcttg
     5041 atgtatagaa tttcgagctt gtcgggtcgt tagctcagtc ggtagagcag cggactttta
     5101 atccgttggt cgagcgttcg aatcgctcac gacccaccag ataaaacaaa aaagctgagt
     5161 tttcaaaact cggctttttt tgttttccga caatccttgt tcggaaagcg cggcatttcg
     5221 tcaaattctt tggtgcggct tccgtatttt tcccgaaaat cccttataat tccgcctctg
     5281 caaccttcat cgggtgatgc tttatgcgtt gtcccgagta ttgaaatatt acaagtaccc
     5341 accaggaaag aacaaacgtg gacaaactga aaatctccgc aaacggcccg ctcaacgggg
     5401 aaataacggt ctcgggcgcg aaaaacgcgg cattgccgct gatgtgcgcg ggtttgctga
     5461 catcgggtac gttgcgcctg aaaaacgtcc ctatgctggc agatgtgaaa accacgcaaa
     5521 agctgcttca ggggatgggc gcgcgcgtcc tgactgacaa tatcagcgaa tttgaaatca
     5581 acggcggtac ggtaaacaat acctgcgccc cttacgaatt ggtacggacg atgcgggcct
     5641 cgattttggt gctggggcct actttggcac gtttcggcga ggcgcaagtc agcctgccgg
     5701 gcggctgcgc catcggttcg cgccccgtcg atcagcattt gaaaggcttg gaagcgatgg
     5761 gtgctgagat tgttatcgaa cacggttacg tcaaagccaa aggcaaactc aaaggtacgc
     5821 gcgtggcgat ggatgtcgtt accgtcggcg gcacggaaaa cctgctgatg gcggcgacgc
     5881 tggcggaagg tacgacggtt ttggaaaact gcgccattga gcctgaagtg gtcgatttgg
     5941 cggaatgcct ggtcaaaatg ggcgcgaaaa tcagcggcat cggtacgtcc acgatggttg
     6001 tggaaggcgc gggcgagcta cacggctgcg aacacagcgt cgtccccgac cggattgaag
     6061 cggggacgtt tctgtgcgcg gtggcgataa ccggcggcag ggtggttttg cggaatgccg
     6121 ccccgaaaac gatggaagtg gtgttggaca aactggttga ggcaggtgcg gtgattgagg
     6181 cgggcgatga ttggatcgcc atcgatatgc ggcagcgtcc gaaggcggtg gacatccgca
     6241 cggtcgtcca ccccggcttc cccacggata tgcaggcgca gtttatggca ttgaatgccg
     6301 tggcggaggg aagctgccgc gtggtggaaa cgatttttga aaaccgcttt atgcacgtcc
     6361 ccgagttgaa ccggatgggg gcgaacatta caaccgaggg caatacggca tttgtgcagg
     6421 gtgtggaacg gctttccggc gcagtcgtca aggcgacgga tttgcgtgcg tccgcaagcc
     6481 tcgttatcgc cggtttggcg gcgcgcggcg aaaccgtggt cgaacagatt taccacttgg
     6541 atcgcggtta tgaaaatatt gaaaaaaaac tcggcagcgt cggcgcgaaa atcgagcgcg
     6601 tatccggctg atcgggttgc gatgccgtct gaagccttca gacgg
//
LOCUS       DAWEYF010000109         6609 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.109, whole genome shotgun sequence.
ACCESSION   DAWEYF010000109 DAWEYF010000000
VERSION     DAWEYF010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6609
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.109"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(136..1269)
                     /locus_tag="WGN93_001509"
     CDS             complement(136..1269)
                     /locus_tag="WGN93_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227403.1"
                     /translation="MFKKFKLVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGKEVWLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     IREEKQGDKLPDFPLNLENLEKEVSRYAEAAARRSGGRRDLSH"
     gene            complement(1443..1892)
                     /locus_tag="WGN93_001510"
     CDS             complement(1443..1892)
                     /locus_tag="WGN93_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227404.1"
                     /translation="MENRFEKIVKDIFSFTQFVSEAENEIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCNISHFLHFADRA
                     EADIPNQSRSYAEYWWEMEMFKMSVLEDWERSGRPLNWEKWQRQYRS"
     gene            complement(2058..2411)
                     /locus_tag="WGN93_001511"
     CDS             complement(2058..2411)
                     /locus_tag="WGN93_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227405.1"
                     /translation="MDKICVTEQDVNILASDRNYELNIEIFIDDIIHFQITDESYKVK
                     FSEYLFENKTENNSDGNPTANYFFEIIDDSYMDWLKEESFGFFEKKYYKAYIFFFSDS
                     VIEVISSTEPVFYSK"
     gene            complement(2897..3433)
                     /locus_tag="WGN93_001512"
     CDS             complement(2897..3433)
                     /locus_tag="WGN93_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ0227406.1"
                     /translation="MDYNQTVLSHLQNFWKHHDIKGFTWALGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDRFQLGKTVN
                     IGRPWVEQSSFQHFLISLPYPYGQELEYMDNVRFFWLLPITQPERLFLNTHSVEDLET
                     RFDELGIDYLDINRASVI"
     gene            complement(3514..4056)
                     /locus_tag="WGN93_001513"
     CDS             complement(3514..4056)
                     /locus_tag="WGN93_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ0227407.1"
                     /translation="MINHIEKYTGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYIT
                     LGLSKHDLNYKSRSEILFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVVYLPRS
                     IVDSTKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQ
                     FLLDNEVGNLSDMNRKPFTW"
     gene            complement(4184..4411)
                     /locus_tag="WGN93_001514"
     CDS             complement(4184..4411)
                     /locus_tag="WGN93_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227408.1"
                     /translation="MDIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            complement(4470..4793)
                     /locus_tag="WGN93_001515"
     CDS             complement(4470..4793)
                     /locus_tag="WGN93_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ0227409.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     RLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            complement(4783..5136)
                     /locus_tag="WGN93_001516"
     CDS             complement(4783..5136)
                     /locus_tag="WGN93_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227410.1"
                     /translation="MGIKNEQIIICKKYNTEIYPISDVSKIGVAENVKQANLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            complement(5120..5818)
                     /locus_tag="WGN93_001517"
     CDS             complement(5120..5818)
                     /locus_tag="WGN93_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ0227411.1"
                     /translation="MVRTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNNQTLISNRIHPFYSDSKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPTPLKAYNLTVADWHTYFVKSSQAETEGVWVHNDCPPYKRPNNATTKAQRESVQGKP
                     CVEYGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGRLSQY
                     SKEQKRKLSNGNKK"
     gene            complement(5949..6326)
                     /locus_tag="WGN93_001518"
     CDS             complement(5949..6326)
                     /locus_tag="WGN93_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ0227412.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRDIVIGISTIIDFLMVPNWELFEIKASPWLPDSVGIHERYERFT
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            complement(6357..>6609)
                     /locus_tag="WGN93_001519"
     CDS             complement(6357..>6609)
                     /locus_tag="WGN93_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227413.1"
                     /translation="KYPYPMDIPRDIVIGIGTIIDFLMVQNWKLFEIKASPWLPKSVK
                     INERYERFRVMLRYIFTDLDVEDWKFFYFPIQHSKGRLR"
BASE COUNT         1866 a         1463 c         1176 g         2104 t
ORIGIN      
        1 ccgtttaatg tgtatttccg ttttttggat tgtggttttc aatttgtagc gaatcggatt
       61 cggcatatac ggcattgcaa aaagcgtttg actctccaat gccgtctgaa aaccggtttc
      121 agacggcatt tgcgttcagt gagaaaggtc gcgcctgccg cccgaacgtc tcgccgcagc
      181 ctctgcataa cggctcacct ctttttccaa attttccaag ttcaaaggaa aatcaggcag
      241 tttgtctccc tgtttctctt cgcggataat ccgcccgcca tccaaatacc acgtctgttg
      301 cgcatgatag gtctgtatat ccgccgttac gccatccgct ttcaatgcta ccgtcgaaga
      361 ttgtgcaata aaaagatttc cgtttttcaa ataatattcg aaactctggc gtttttttcc
      421 attgtcgaaa ctccaataga ctttttgcgg cagaccgtcc gcatcatagc cgaccacaag
      481 actgttcgcc ttcatccccc ggggcatcaa ttcccgcata ttctgataaa acacagaatc
      541 gcgcgagtcc gatgcaatcc ggttgctctc ttcgcggaag tcccaaacct tctgctcatc
      601 attcgcgaca tcccggtatt tcgccaaata tacctgggcc atctgataac acccgaggca
      661 atgctcataa acatcttccc cgattttccc gcgccccgac gcatcaaata ccgaaccgtc
      721 cggttgccaa acaacccgat attctcctgt cgtttcataa ttttctccgt gagccgttcc
      781 gccgtacaca tttacagaaa acggacgatc gttccgatac agatattcgg cattaacaaa
      841 cgcttccggc gagcgttgcg aaagcgaaac cgcaaccaaa ccgccctcgc cgatatggta
      901 atccagccaa acctctttcc catgttcctg ctccgttacg tgaaaccatt tcgccttttc
      961 tttcaaacga ctgagccgga tagcgagcgc gagataatcc ttctccgact gcaacggacc
     1021 gtcatccaca gctccggcaa gactttcctc cgtcctcatc gattccttca cgatgacaac
     1081 cgccctgtcg gcatttcgga acaggcgggc aagtttcgcc acaaaagcat tcggattttc
     1141 aggtatttca gttgccgtat cgctcaaaaa ccaacgcgga ttaatctcat aggcaatacc
     1201 cgtccccagc caaaaggcaa atacaagggc aaaaaatgac aacaatacca gtttgaattt
     1261 tttaaacata tttatttttc gtttaattcg tttaacagga tatatcgatt atatcagacg
     1321 agctttgatt gtttgatttt taatctaatc tacgcttgct gccgtacttt aaaaaaacct
     1381 atgcaggctg cggcttgtta ctcttgtttg ctttgattca aattttcaac taattcaaat
     1441 gcttaagatc gatattgcct ttgccatttt tcccaattta acggtcttcc cgagcgttcc
     1501 caatcttcta aaaccgacat tttgaacatt tccatttccc accaatattc ggcatatgaa
     1561 cgtgattgat tgggaatgtc ggcttctgcc cgatcggcaa aatgcaaaaa atgagaaata
     1621 ttgcaaacta tattattttc aggaacttct tcggcaaata gatgcttgac tgactgtaac
     1681 gcttcggtct gatatttttc tgtccatttc tcccattttt caggctttcc cgatatttcc
     1741 caatcttcca atgcggaagc attcaagatt tccaattccc accaacagtc gtaataacgg
     1801 gaggattggt taggaatctc attttctgct tcggaaacaa attgggtaaa actaaaaata
     1861 tccttaacga ttttttcaaa tctattttcc ataggttgcc gcccctccca attgcgtgcc
     1921 aacaatttcg gcaaaatcaa gccggcaagc cccggcatcc tgtgctaatc ggagaaaatg
     1981 ccgtctgaaa gccgaatacc gcttcagacg gcattttgat tgttgggttt ttaatcagag
     2041 ctttgtttga taatttgtta ttttgaataa aatacaggtt ctgtcgagct gataacttct
     2101 attacagaat cgctaaaaaa gaaaatgtaa gccttataat atttcttttc aaaaaaacca
     2161 aaactttctt ctttcaacca gtccatataa ctgtcatcta ttatctcgaa aaaataattt
     2221 gcagtaggat ttccatccga attattttct gttttatttt cgaataaata ttctgaaaat
     2281 tttactttat aagattcatc tgttatttga aaatgaatta tatcgtcaat aaatatttca
     2341 atatttaatt cataatttcg gtcggatgcc aaaatgttca catcttgttc ggtaacacaa
     2401 attttgtcca cataaaatct gtgattattg ttagaaaatt gtaatggttt acacaatcgt
     2461 tttccatatc taatttttgt tttcttattg ccctgccgga taaagcaggt ctgcctccgt
     2521 actgtctatc ctcacattta ctttcctgcc atcggctttt atctccccgg ttttaccgtt
     2581 tttgccaact ttgcggcttt ggcggcggca atgttgaagg cggcttcgac ggtttcggcg
     2641 gcattggggt tgacccgtac tcatccgcaa acggcaacac gacggacggt gtttgctttt
     2701 cagccgtctg ccgttttgac caaggtgctg ccgtggaagg agcaggtgta ggatttttga
     2761 agaactcagt tctcaatatc ctatttcaaa tgaaggaaat gccgtctgaa aattaaacac
     2821 ggtttcagac ggcattttga ttgttggatt tccaatccaa cctacgcttg ctgaaagatt
     2881 tcaaacaaca taaatatcaa ataacgcttg cacgatttat atccaaataa tcaataccta
     2941 gctcatcaaa tctcgtttcc aagtcttcta ctgaatgagt attcaagaaa agtctttctg
     3001 gctgggtaat tggcaataac cagaaaaatc ggacattatc catatattcc aattcttgcc
     3061 cataaggata aggcagagaa atcagaaaat gctggaagga tgattgctca acccacggtc
     3121 tgccgatatt gaccgttttc cctaattgaa atcgatcggg ataatgcata cttgcagatg
     3181 ccagcattgc caaggtctca atatgttcag gtgtttcaaa tgggctgatg ataaaaaact
     3241 cctgccctaa aaattgacct attccagagc tgacataaac ccaaggctca tcttcatgat
     3301 taggaatcac ttggaaaact tggaaatcgg gaagttcttc aacaatcctt cctaaagccc
     3361 aagtaaatcc tttaatatca tgatgtttcc aaaaattttg caaatgagat aaaacagttt
     3421 ggttatagtc catgcttttt agcctgtttt caaaggtcgc ctgaaacctg aaacaaggtt
     3481 tttcagacgg cattgaccgt ttgaagaagg tatttaccaa gtaaacggtt tccgattcat
     3541 atccgaaagg ttgccaactt cattatccaa caagaactgc tcaaaagcat tccaaccttt
     3601 cttttccacc aattctgctt cctgtttata caaggggaca agcaaaggga aaacgatatt
     3661 gtagtgttcg ccataacaga cctgaaaatc atcatcgaaa taaaatgggg cggaaacata
     3721 cagtgcatcc atttttgttg aatcaacaat gcttctgggc aaataaacaa cctgcccccg
     3781 aagaaggatt tttttattct caatgatggt ttctgccaac catcttaaaa atggaaaaat
     3841 ctgattttca tcatatttta aagaacatac aaaaagtatt tcagatctgc ttttataatt
     3901 cagatcatgt ttgcttaacc ctaaagtaat ataagttttt aaatccctgt taggggaaga
     3961 gggaatagct gcgatattta atttgtactg acttcccgaa tcacttttcg agccatgaga
     4021 aatagtgcct gtatattttt caatatgatt aatcatattt ttcttagctt cccatcactg
     4081 tatcgaaata atcatagacc agattgagac aaaacgcctt gttcccattg atagaaagtc
     4141 cgtctgaaaa gtaaaagcgt ttcagacgga ctacgtttgc cgactatccg acccacttta
     4201 ttatccaatg agattcttgc aggtattctt ttaatatttc taagttttcg acccagtcat
     4261 cgtaactgtc aaatgatgag aatttgtcat ttgaagataa cagtatcaga aatcccccgg
     4321 tattttcctg atcatcaata atttttatga atttttcttc aggattgacc ccattcagga
     4381 taacccccaa agtattgaat tttatgtcca tagacacacc ctaatcttta atgggaatat
     4441 ggttttttca acccaaccta cactttttgt tagttcccat acgaaccaaa accttcataa
     4501 ttacaatcat ttttttgtgc aataccaaat aacgtagttt caatagctaa aatgttttca
     4561 agggaaggga cgatattgac ggaacaatag caagtccaca tttctccgaa ttcatcttgt
     4621 tcaatactga tttgaaaatc ttgccgataa gaaatgagcc ggctttctat tgattgcaga
     4681 ttcttttgag aacctcctat aaaaaactct attatcatag gttttgtcaa atcaaaccct
     4741 agttcttgat attgtttcag tacatctgaa gtagattttt cgtcaattat catttaatag
     4801 caactcatca aaccatacgt cttcataacc gttttcccca attaaaaaac ggtaaccggg
     4861 cggaagtgtc aaaaagggga tgatttcggg tcgccatatt tgcaaatgga aagtatgcaa
     4921 gggcaggaaa aaatttttat cataggagaa gttttcaccg gcccagatat accaaccgtt
     4981 agtatcacct ttgggacggt gccttaaccc gttaatcgga tacaggtttg cctgtttgac
     5041 attttcagca acaccgattt ttgaaacatc ggaaatagga tatatttctg tattatattt
     5101 tttacaaatt attatttgtt cattttttat tcccattact cagtttcctt ttctgttctt
     5161 ttgaatattg gcttaatctc cccccttgtt ttgcagaaca agtcggacat tgcggttgta
     5221 ctgattcaat tgctctcatc ttagatttgt caattgtccc tgtttcataa tactcgacaa
     5281 ctaatggttt tttatggtcg gcaatcattt tttcggctaa tttaccgtat tcaacgcagg
     5341 gttttccttg tacactttct cgttgtgctt ttgtcgttgc gttatttggt ctcttatagg
     5401 gcggacaatc attatgaacc caaacccctt ccgtttccgc ctgactgctt ttgacgaagt
     5461 aggtatgcca gtcggcaacg gtcagattgt aggctttgag cggtgttggt ttgacaacga
     5521 tgttgcggac ggtttgggtt ttgccgcttt cggataacag cctgcttccc gctttcaaat
     5581 cttccgcttt aatccatttg ctgtccgaat aaaacggatg gatgcggttg gaaatcaggg
     5641 tttggttgtt gccgatgccg tctgaaattt caatgtaaac ggtttcctgg tacggattgc
     5701 cgtatcgggc ggtaacaggt ttgtatccag tttttccact ggtttcatct ttggcgaaga
     5761 cgcggtcgcc ggcttgaata tgggcaatgg ctttgtagcc gtctgccgtt ctgaccaagg
     5821 tgctgccgtg gaaggagcag gtgtaggatt tttgaagaac ttagttccca atatcctgtt
     5881 tcaaataagg ggaaggtcgc ctgaaaatta aacacagttt cagacggcat tttgattgcc
     5941 ggggtttgct attttttgtt gtaataatca aatcgcacgt tgactatgtc tttctcggta
     6001 aaaatataac ggagcattgt tgtgaatctt tcataacgtt catgaattcc cacgctatca
     6061 ggtagccaag gggaagcttt aatttcgaaa agctcccaat ttggaaccat taaaaaatca
     6121 ataatggtac tgattccaat cacaatatcc cttggtatat ccatcggata aggatatttt
     6181 tttctaacct cgattaaatc attctccaat ttccaatatt cttcatcatc ccacaccccg
     6241 tcatcatacc atttgccaat aaatgaattt tcgtcatacc cctcaaaata aggaacgttt
     6301 cttataatat ccttgaactc acacataata atgtatctcc aatataatta aacttttcat
     6361 ctcaatctac ctttactatg ttgtattgga aagtaaaaaa atttccagtc ctctacatct
     6421 agatcagtaa aaatataacg gagcattact ctgaaccttt cataacgctc attaattttg
     6481 acacttttag gcaaccaagg agaagcttta atttcaaaaa gtttccaatt ttgaaccatt
     6541 aaaaaatcaa taatggtacc gattccaatc acgatgtccc ttggtatatc catcggataa
     6601 ggatatttt
//
LOCUS       DAWEYF010000110         6469 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.110, whole genome shotgun sequence.
ACCESSION   DAWEYF010000110 DAWEYF010000000
VERSION     DAWEYF010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6469
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.110"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(141..1529)
                     /locus_tag="WGN93_001520"
     CDS             complement(141..1529)
                     /locus_tag="WGN93_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ0227414.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLIDHILRDADIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGWRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGKSERRYKDR"
     gene            1857..2804
                     /locus_tag="WGN93_001521"
     CDS             1857..2804
                     /locus_tag="WGN93_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ0227415.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            complement(2857..3189)
                     /gene="trxA"
                     /locus_tag="WGN93_001522"
     CDS             complement(2857..3189)
                     /gene="trxA"
                     /locus_tag="WGN93_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ0227416.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            3487..3960
                     /locus_tag="WGN93_001523"
     CDS             3487..3960
                     /locus_tag="WGN93_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ0227417.1"
                     /translation="MTDFSVWETAPFGATVDYILQRYNNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMADDLNDHIHLENDILFARVLAS"
     gene            complement(4030..4851)
                     /gene="nadE"
                     /locus_tag="WGN93_001524"
     CDS             complement(4030..4851)
                     /gene="nadE"
                     /locus_tag="WGN93_001524"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ0227418.1"
                     /translation="MMRIFSTGGKMDTQAVITHIARWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTADLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            5048..6403
                     /locus_tag="WGN93_001525"
     CDS             5048..6403
                     /locus_tag="WGN93_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ0227419.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTAVQGAGSEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASISKLAQTLSYSMTQNVRT
                     HTARFERQTQALQHYRPDISVCKKNIDRFQTALPAAFSQLLARRRQSLSAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDC
                     I"
BASE COUNT         1470 a         1708 c         1743 g         1548 t
ORIGIN      
        1 gtactggttt ttgttaatcc actatattgc agattaatcc tttgggtatc aaagccgggc
       61 ggtgttgaaa cattgcaaaa atgccgtctg aaactcgaaa tcggtttcag acggcattgg
      121 tttatgaggc aggttggggc ttagcggtct ttgtaacggc gttcgctttt gcctgcaaaa
      181 gaatcgccgg ctttacgttt gcctttgaag ccttcgccgg tttttttgaa accgtctttc
      241 ttaaagcctt ctttcttgaa accttcgccg cgcgttttgc cgccgaagcc ttctttgccc
      301 ggtttatgat cgccgcgcca accgccggat ttacgatcgc cccagccgcc tttgcctttc
      361 ggcttgccgc ctgcggattt gcgtttgcgg gtcggttcca tgccctcgat ggtcagttcg
      421 ggcagttttc ggttaatgta tttttcgatt ttgtggactt tgacgtattc gttcacttcg
      481 gcaaacgtaa tcgcaatacc cgtgcggcct gcgcggccgg tgcgcccgat gcggtggacg
      541 tagtcttccg cctgtttcgg caggtcgtag ttgataacgt gggtaatggt cggtacgtcg
      601 ataccgcgtg cggcgacgtc ggtggcaacc aaaattttgc agcggccttt acgcaaatcc
      661 atcagtgtgc ggttgcgcca gccttgcggc atatcgccgt gcaggcagtt ggcggcgaaa
      721 cctttttcgt acagttcatc cgcaatgact tcggtcatgg ctttggtgga cgtgaaaatc
      781 acgcattgat cgatgtcggc atcgcgcagg atgtggtcga tcaggcggtt tttgtgacgc
      841 atatcgtcgc agtacagcag ttgttcttcg attttgcctt ggtcgtccac gcgttcgact
      901 tcgatgattt cagggtcttt ggtcagtttg cgtgccagtt tgccgaccgc gccgtcccaa
      961 gtggcggaga acaataaagt ctgacggtcg ctcggcgttg cttccacgat ggtttcgatg
     1021 tcgtcgataa agcccatatc caacatacgg tcggcttcgt ccagaatcag cacttccaaa
     1081 cgttcaaaat cgactttgcc gctttgcatc aagtccatca ggcggcccgg cgtggcgaca
     1141 atcagatcga ccggtttgct cagggcgcgg gtttggtagc cgaacgatgc gccgccgacg
     1201 atgctgacgg tacggaacca acgcatattt ttggcatacg ccagcgcgtt tttctcgact
     1261 tgagccgcca attcgcgggt cggggtcaac accaaagcac gcgggccttt gcccggtttt
     1321 tcgctgcgtt tggtcagtcg ctgcaaagtc ggtaacagaa aggcggcggt tttgccggag
     1381 ccggtttgcg ccgaagccat gatgtcgcgg ccttccaaag caaacggaat cgcctgcgcc
     1441 tgaatcggcg tcgggctttc gtaaccctcg ctgctgacgg cggacaaaat gtttttatca
     1501 aggttcaaat cggcaaattt aatagacatg gctatccttg gaagacaaca acgcccgcgt
     1561 ccgaaaggtt cagacggcct gaagcaggga agggtaacga tacggggaat gtgaagttac
     1621 agggttgtcg caagcggctt gcttgtggtt tacatcgacg gcaacctgca cagatacgct
     1681 ttgcaaaatc aaagcaacag aagaaacgcg cccgtaaggg cggtttaggt tggaaggcga
     1741 tggcttcgta tgacaagata agcggtggat ggtatagggt ttgcccgaaa cggtcaagca
     1801 atcgggcgtt aattacagta aaattgccgt tttccacttt attccgcctg aaaccaatga
     1861 ccgacatcac accgtttgcc aaccgcttgg gcaaaaacat caaacacctt atgaaatggg
     1921 cgaaacgcaa cggcatcgaa gcctggcgca tttacgaccg cgacatcccc caattcccct
     1981 ttgccgccga tgtttacggc gatcgaatcc accttcagga atacgatacc ggctggctga
     2041 tgcggcccga agaatacgaa gcgtggcttg ccgaagtctt ggaagccgtc gccttcgtta
     2101 ccggttttgc gcccgaacaa atccgcctca aacgccgcga acgccaaaaa ggtttgcagc
     2161 aatacgaaaa aaccggcaag gcgggcgacg atttcgtcat caccgaaaac ggccgcaagt
     2221 tttgggtcaa ccttgataag tatttggata cggggctttt tttggatcat cgaaacacgc
     2281 gcaaaaaagt cggcgaaacg gcggcgggca aacgtttttt aaacctgttt tcctacaccg
     2341 gcagcttcac tgtctatgcc gccaccggcg gcgcggcatc cagcgaaact gtcgatttgt
     2401 ctaacactta tctcgattgg gcgagacgca attttgaatt gaacggcatc gatacggaac
     2461 ggcataaaat cgtccgcgcc gacgtgttcc aatatcttca gacggcatat ggggaaggca
     2521 ggcggttcga cctcattgtg atggacccgc ccagtttttc caacagcaag aaaatgtccg
     2581 acatcctcga catccagcgc gaccacaaaa agctgattga cggcgcggtg aagctgctcg
     2641 cttcagacgg cattttgtac ttttccaaca acctgcgcag cttcgtctta gacgacttgg
     2701 tatcggaaca atacgccgtc aaagacattt ccaaacaatc cgttcccgaa gatttccgca
     2761 acaaaaaaat ccataggtgc tgggaaatcc gccacaaatc ttaagggtgc gaaaaagccg
     2821 ccggaatctt ccggcggctt tttcgattgc gctttatcag gcgatagagg cttcgacaaa
     2881 ggcggtcagc tgaccttttg ccaatgcgcc gactttggtg gcgacgactt cgccgttttt
     2941 gaacaccatc agggtcggaa tgccgcgcac gccgaaacgg gacggggtgg cttcgttgtc
     3001 gtcgatgttg attttgacca ctttcagacg gccttcaaat tcggcggcaa tgtcgtccaa
     3061 aatcggggca atcattttgc aggggccgca ccacggagcc caaaagtcca gcaggacggg
     3121 gatatctgca tttaaaacgt ctttttcaaa agcggcatcg ctggtgtgta caatcaattc
     3181 gctgctcatt atttttcctt ttcggttggg attggcacga tagcgtgcag gatagggctt
     3241 gggcataaaa atttcaagtg ggcgggcggg ataatagttt ttctgtaccg ccccaatcgc
     3301 ctttgcaaat tctaaaaaac ggttcggaca gtattttatt tttgaaaatt acttttatta
     3361 tcaaagtgta aggaatgttt ttgaagctgt acagaaacgc gcgggcggtg tatgctccgt
     3421 ttaaatagat tcttaaagta tgaatgttca aaaccaaacc cgaaacccta taaaaggaac
     3481 actgcaatga ctgatttttc cgtttgggaa acagccccct ttggcgcaac cgtcgattat
     3541 atcctgcaac gctacaacaa tgtccaccgc gcacaatttg aagaattggt gccgctggcg
     3601 cagaaagtgg cccaagtcca tgccgatacc tttccggcgg aaattgccgg gctgcttgcc
     3661 tatatgcaga acgaactgct gatgcatatg atgaaagagg aaaggatgct gtttccgatg
     3721 attaatcagg gtgtcggacg cggtgcggca atgcccatca gcgtgatgat gcacgaacac
     3781 gaagaacacg accgcgccat cgcacggctc aaagagctga ccgacaattt ccaaccgccc
     3841 gaaggggctt gcggaagctg gacgcggctt tacgcgctgg cgaaagaaat ggcggacgat
     3901 ttgaacgacc acattcattt ggaaaacgat attctgtttg cccgcgtact tgcttcttaa
     3961 ggaacggaag ccggatatgt caatgccgtc tgaaacacgg ttttccgctt cagacggcat
     4021 tttcatgttt cagcccaaca attcgggcgg aatgcggcac acgggaatcg ggttgatttt
     4081 gtgctgcatg gcgcggtgaa gtcgcgtata gatttctaga acttcgcgct gccgcccttc
     4141 aaaatcttcg ggtttgcgcg tgccgtacac gcccattgcc cactccagtt cgggatagct
     4201 tgcgcccatc tgttcttcgt cggtgcgttc cgtatcccac aggccgtcgg tcggcggggc
     4261 tttttgaatc gcctcgtcca cgcccaatgc ttcggcaagc cggtaaacct gcgttttggt
     4321 caggtcggca atcgggctga tgtccacgcc gccgtcgccg tatttggtaa aaaatcccac
     4381 gccgaaatct tcaattttat tacctgtccc cgtaaccagc agtccgtgta tctgcccgta
     4441 gtagtacagg gtcagcatac gcaggcggct tctggcgttg gcgagggaaa gcggctgatt
     4501 gtcaaatgcc gtctgatgaa tgccgacggt ttgttcaaag gtctggaagg tgtcggtcaa
     4561 atcggccgtt tgcgcgctta cattggcata ttgccgttgc agattgcgga tgtgcagcct
     4621 tgcccgctca agctggtcgg ggtgttggcg tatcggcata tccagaagca gcgtggtgcg
     4681 gccggtgcgg gcggcgagtg cggagacgac ggcggaatcg atgccgccgg aaacgcctac
     4741 gacgaaccct tttgcatttg cccgggcggc gtattcgtcc aaccatcggg cgatatgtgt
     4801 gataactgcc tgcgtatcca tttttcctcc tgtcgaaaat atccgcatca tagcctgccg
     4861 gcggtgcaat ttgaatagat tgcaggcagg ttgatgaata tttttcccat tccccgctta
     4921 aaaaagtcat acgggaaaag gcgggcggca agatggcgcg tgttataata ttgttgacaa
     4981 tttaggcggc ccgatgccgc cttgggcttc aaaacatatt catatttttt attatttgat
     5041 tgattcgatg tctgattttt ttcattctga cgtgttgtcc gtttccgagt tgaacgcatt
     5101 tgccaaaagt attttggaaa accaccttgc cggtttgtgg attgccggcg aagtgtccaa
     5161 cctgacccgc gccgccagcg gacattatta cttctcgctt aaagacagcc gcgcgcaggt
     5221 gcgttgcgcg atgttcaaag gtgcggcggc gcgtttggcg aagcctttga aagaaggcga
     5281 ccatatcgaa gtatcaggga aaatcagtat ttatgaaacg cggggcgaat ttcagattac
     5341 cgtgaacgaa gtgcggctca agggcttggg gcagctttac gaagcctatg agcggttgaa
     5401 ggcgcagttg caggcggaag gcgcgtttgc ggcggaacgc aaaaaacctc tgcctgcccg
     5461 accgcaatgt atcggcatcg taaccagttt ggcggcggcg gcattgcgcg atgttgtaac
     5521 caccttgaaa cgccgcgcgc ccgaaattcc cgtcatcgtt tatccgactg ccgttcaggg
     5581 cgcgggcagc gagtttcaga ttgcccaagc gattaaaacc gcatcgcaac gcgccgaatg
     5641 cgacgtgttg attgtctgtc gcggcggcgg cagcattgaa gatttgtggg cgtttaacga
     5701 agaaccggtc gtacgcgcca ttgaagcctg cacgattccg gtcgtcagcg gcgtaggcca
     5761 cgaaaccgat ttcacgcttg ccgattttgt tgccgacgta cgcgcaccga caccgaccgg
     5821 cgcggcggag ctggtcagtc ccaaccgcca agaatcgtta catcgtctag cccaagcgca
     5881 aggccgtctg aaaactgttt tggagcaacg ctatttcgat gccagccaaa aactcgactg
     5941 gctcgcacgg caaatccgtc atccgcgcca aaaacttgac gagcaacgcg cttcaatcag
     6001 caaactggcg caaacgctgt cttactcgat gacgcaaaac gtccgtaccc acaccgcccg
     6061 ttttgaacgc caaacccaag ccctgcaaca ttaccgtcct gatatttccg tttgcaaaaa
     6121 aaacatcgac cgctttcaga cggcattgcc cgccgccttc agccaattgc tcgcccgccg
     6181 ccgccaaagc ctgagcgccc aagcagcatt gctcgaagcc gtttcgccgc agcacattct
     6241 ggagcgcggc ttttccgtcg tcaaaaacac acgcggacaa gtcatccgca acgccgatgt
     6301 tttgaagcag gggcagaagc tgcacattat cttcgccgac ggcgaaaccg acgtgcgcgt
     6361 aagcaaagaa caagggcagc aggatttgtt cgattgcatt taaacccaat cggaaaaacc
     6421 gctccccctc cgccgtcatt cccgcgaaag cgggaatcca gtcccttga
//
LOCUS       DAWEYF010000111         6441 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.111, whole genome shotgun sequence.
ACCESSION   DAWEYF010000111 DAWEYF010000000
VERSION     DAWEYF010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.111"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            116..1657
                     /locus_tag="WGN93_001526"
     CDS             116..1657
                     /locus_tag="WGN93_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ0227420.1"
                     /translation="MDGRRWVVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGWQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRACSDKAVSPVMPSEPQSVGEYVLL
                     AFAAAVLGICCLFPLAAVVVKACSAGESWQVLAERETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRLAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTAYRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFAVCIFLLLDNGEGGK
                     QTETL"
     gene            1686..2285
                     /locus_tag="WGN93_001527"
     CDS             1686..2285
                     /locus_tag="WGN93_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ0227421.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVELIRRHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            2282..2887
                     /gene="nadD"
                     /locus_tag="WGN93_001528"
     CDS             2282..2887
                     /gene="nadD"
                     /locus_tag="WGN93_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ0227422.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHGLYEK"
     gene            2946..3332
                     /gene="rsfS"
                     /locus_tag="WGN93_001529"
     CDS             2946..3332
                     /gene="rsfS"
                     /locus_tag="WGN93_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ0227423.1"
                     /translation="MNEQELQDLQKMVEVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            3386..3856
                     /gene="rlmH"
                     /locus_tag="WGN93_001530"
     CDS             3386..3856
                     /gene="rlmH"
                     /locus_tag="WGN93_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ0227424.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRIFEAIPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFI
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            3931..4197
                     /locus_tag="WGN93_001531"
     CDS             3931..4197
                     /locus_tag="WGN93_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ0227425.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            4354..5037
                     /locus_tag="WGN93_001532"
     CDS             4354..5037
                     /locus_tag="WGN93_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ0227426.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            5161..5673
                     /gene="coaD"
                     /locus_tag="WGN93_001533"
     CDS             5161..5673
                     /gene="coaD"
                     /locus_tag="WGN93_001533"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ0227427.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            5705..6358
                     /locus_tag="WGN93_001534"
     CDS             5705..6358
                     /locus_tag="WGN93_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ0227428.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1412 a         1699 c         1849 g         1481 t
ORIGIN      
        1 ctatatttca gacggcggga ggaaggcgga tacggtatgt agtcggattg aaatatacgg
       61 tatgtggggg cttttgggta caatcgcaac atcagtgttt caagtgggga aggcgatgga
      121 tggacggcgt tgggtggtat ggggtgcttt tgccctgctg ccttcggctt ttttggcggt
      181 aatggtcgtt gcgcctttgt gggcggtggc ggcgtatgac ggtttggcgt ggcgcgcggt
      241 gctgtcggat gcctatatgc tcaaacgttt ggcgtggacg gtatttcagg cagcggcaac
      301 ctgtgtgctg gtgctgcctt tgggcgtgcc tgtcgcgtgg gtgctggcgc ggctggcgtt
      361 tccggggcgg gctttggtgc tgcgcctgct gatgctgccg tttgtgatgc ccacgttggt
      421 ggcgggcgtg ggcgtgctgg ctctgttcgg ggcggacggt ctgttgtggc gcggctggca
      481 ggatacgccg tatctgttgt tgtacggcaa tgtgtttttt aacctgcccg tgctggtcag
      541 ggcggcgtat caggggtttg tgcaagtgcc tgcggcacgg cttcagacgg cacggacgtt
      601 gggcgcgggg gcgtggcggc ggttttggga cattgaaatg cccgttttgc gcccgtggct
      661 tgccggcggc gtgtgccttg tctttttgta ttgtttttcc gggttcgggc tggcattgct
      721 gctgggcggc agccgttatg ccacagtcga agtggaaatt taccagttgg tcatgttcga
      781 actcgatatg gcggttgctt cggtgctggt gtggctggtg ttgggggtaa cggcggcggc
      841 agggttgctg tatgcgtggt tcggcagacg cgcgtgttcg gataaggcag tttctcctgt
      901 gatgccgtct gaaccgcagt cggtcgggga atatgtgctg ctggcgtttg cggcggcggt
      961 gttgggcata tgctgcctgt tcccgctggc ggcggtcgtg gtaaaggcct gttctgcggg
     1021 agaatcttgg caggtgttgg cggaacgcga aacttggcag gcggtgtgga atactttgcg
     1081 cttctcggcg gcggcggtgt ttgcggcggc ggttttgggt gtggtgtatg cggcggcggc
     1141 gcggcggttg gcgtggatgc gcgggctgat gtttttgccg tttatggtat cgccggtttg
     1201 tgtttcggca ggcgtgctgc tgctttatcc gcagtggacg gcttcgttgc ccttgctgct
     1261 ggcgatgtat gcgctgctgg cgtatccgtt tgtggcaaaa gatgttttgt cggcctggga
     1321 cgcactgccg ccggattacg gcagggcggc ggcgggtttg ggcgcaaacg gctttcagac
     1381 ggcataccgc atcacgttcc cccttttgaa accggcgttg cggcgcggtc tgaccttggc
     1441 agcggcaacc tgcgtgggcg agtttgcggc gacattgttc ctgtcgcgtc cggaatggca
     1501 gacgttgacg actttgattt atgcctattt ggggcgtgcg ggtgaggata attatgcgcg
     1561 ggcaatggtg ttgacattgc tgttgtcggc atttgcggtg tgcattttcc tgctgttgga
     1621 caacggcgaa ggcggaaaac agacggaaac gttataatgt gaaccctttt tcagaggacg
     1681 gcaaaatgag cgagttggat aacatccttg cccataaccg gcagtttgtc gagtcgggcg
     1741 aatatgaaaa atactttacc gacaaatacc ccgaacgcgg gctggcagtt ttgtcctgta
     1801 tggatgcgcg gattatcggg ctgctgcccg acgcgttggg tttgaaaaac ggcgatgcca
     1861 agctgattaa aaatgccggc gcgctggtta cgcacccgtg gggttcggtg atgcggagtc
     1921 ttttggttgc cgtgtttgaa ttgaaggtca gagagattat ggtcatcgcc catcacgatt
     1981 gcggtatgca ggggctgaat gccgaagaat tcctcgggcg cgtccgggaa agccagattc
     2041 ccgaagaccg tatcgaaacc ctgcgttatg ccggtatcga cctcgacggc tggctgaccg
     2101 gtttcgacaa cgtcgaagac agcgtgcgcc atactgtcga actcatccgc cgccatccgc
     2161 tgatgccgcg ccatattgcc gttcacggac tggtcatcca tcccgttacc ggcaaactga
     2221 cgctggttgt ggacggcagt gtttcagacg gcatggactt atcggaagga atggaaacat
     2281 catgaagaaa atcggactgt tcggcggcac tttcgacccg atacacaacg ggcatctcca
     2341 catcgcccgc gcctttgccg acgaaatcgg cttggacgcg gttgttttcc tgccggcagg
     2401 cggcccgtat cacaaagacg cagcctccgc ttccgccgcc gaccgccttg ccatggtcga
     2461 actggcgacg gcagaagacg cgcgttttgc cgtcagcgat tgcgacatcg tccgagaagg
     2521 tgcaacctat acttttgata ccgtccaaat cttccgccag cagttcccat ccgcgcaact
     2581 ctggtggctg atgggcagcg acagcctgat gaagctgcac acatggaaaa aatggcagat
     2641 gctcgtgcgc gaaaccaata tcgccgtcgc catgaggcag ggcgacagcc tgcaccaaac
     2701 cccgcgcgaa ctgcacgcgt ggctgggcaa gtcccttcag gacggcagcg tccgcatctt
     2761 gtccgccccg atgcataatg tgtcgtcaac ggaaatccgc cgcaaccttg ccggccaagg
     2821 cgtttcagac ggcatcccgc ctgccgccgc acgctacatc cgcgaacacg gtttgtatga
     2881 aaaataaagt caaatcagta agaaacggct ataatgccgt ctgaaaacat cccgttagga
     2941 acataatgaa cgagcaagaa ctgcaagacc tgcaaaaaat ggtcgaggtc gccgtcaacg
     3001 ccctcgaaga catcaaagcc aaagatattt ccgttctcga aacgcaagac aaaacttcgc
     3061 tgtttgccag aatgattatc gccagcggcg acagtacgcg ccaagtcaaa gcccttgcca
     3121 acaacgttgc cgtcgatttg aaagaagccg gttttgaaat cctcagtacc gaaggcgaca
     3181 gcggcgaatg gacgttggtt gatgcaggag acctcgtcgt ccacgtcatg ctccctgccg
     3241 tgcgcgactt ctacgacatc gacaccctct ggggcggcga gaaaccgagt ttccacgccg
     3301 gaatgcagaa gccgtggcac gcggcagact gattcccgat gccgtctgaa tgttcagacg
     3361 gcattttcct gtaagggaga aagcattgaa cattaccgtt ttggcagtcg gcaccaaaat
     3421 gccgcgctgg gttgatgagg ccgtcgccga atacgccaaa cgcttcggac gcgacgtcgc
     3481 ctacgcactc aaagaaatca aacccgaaaa acgcggcgcg ggcgtgaatg ccgcccaagg
     3541 tatggcggcg gaagaaaaac gcatcttcga agccataccg caaggcgcgt tcctcgtcgt
     3601 tcttgacgaa cgcggcaaag caccgacctc cgtcgagctg gcggaacacc tcaaaagctg
     3661 gcagcaaaac ggcgaacacg tctgcttcat catcggcggc gcggacggca tgaccgaccg
     3721 cctcaaacaa caagcccgca tgatgatgcg cctgtccagc ctcaccctgc cgcacggcat
     3781 ggtgcgcgtc cttctgaccg agcagctcta ccgggctgtt tccatcctgc acaaccatcc
     3841 ttatcatcgg gaataagaag gcttttgtct gtacccctaa tcggttaaaa tcaccccgtt
     3901 atttctgaac acacagcaaa ggaatccgct atggcacgca tggtattctg cgtcaagctc
     3961 aacaaagaag ccgaaggcat gaaatttccg ccgcttccca acgaattggg caagcgcatt
     4021 tttgaaaacg tatcgcaaga agcgtgggcg gcgtggacgc gccaccaaac gatgctgatt
     4081 aacgaaaacc gtttaagcct cgccgatccg cgcgcgcgcg aatacctagc tcagcagatg
     4141 gagcagtatt tcttcggcga cggcgcggat gccgttcagg gatacgttcc gcaataacgg
     4201 ttttccgttt tgaacacagg ctgtccgaaa ctgcttcaga cggcctttaa aatacgccgg
     4261 acaactttat cttcacgcaa ccggacaaat tttgacattg ggcaatgtta aaatccccca
     4321 ttattcccaa ccgcgctttc aggagcagat gatatgcaac acgacgttta cgactacacc
     4381 gcgcatacgg tttctaaaaa caccgtcctg cagaaaacct accgcctgct cggattttca
     4441 ttcattccgg cagccgcagg cgcggcactt gccgccaatg ccggtttcaa tttttacgcc
     4501 gccttcggtt cgcgctggat agggtttgcc gtcgtgttgg cgtttttcta cggtatgatc
     4561 cacttcatcg agaaaaaccg ttacagcaat accggcgtta ccctgctgat ggtattcaca
     4621 ttcggtatgg gcgtattgat cggccccgtg ctgcaatacg cgctccatat tgccgacggt
     4681 gcgaaaatcg tcggcattgc cgccgcgatg accgccgccg tctttttaac gatgtccgcc
     4741 ttggcgcgcc gaacccggct cgatatgaac gcgctcggac gcttcctgac cgtaggtgcg
     4801 gtcattctga tggtcgccgt ggttgccaat ctgtttttgg gtattcccgc actcgccctg
     4861 accatttccg ccggttttgt cttgttcagt tccttaatga ttatgtggca ggtacgcacc
     4921 gtcatcgacg gcggcgaaga cagccacatc agcgcggcac tgacactgtt tatctcgctt
     4981 tacaacatct tcagcagcct gctgaacatc ctgttgtctt taaacggcga ggattgatgc
     5041 cggtaaaacg ccgtccgact atgccgtctg aaaatgcttc agacggcatt ttactttggg
     5101 catacaatac ggatgcacac gcaccaacac acagccgact atgaagccgg gaggaatcaa
     5161 atgttaccga atacaccgcg ccgcgccgtt tatgccggca gtttcgatcc gcccacattg
     5221 gggcatctgt ggatgatacg gcaggcgcaa tctatgtttg acgaactcat cgtcgccatc
     5281 ggcattaacc ccgacaaacg cagcacctat accgtcgctg aaaggcagga tatgttgtgc
     5341 gatattacta aaatgtttcc caacgtcaga accgatgtat ttgaaaaccg atttctggtg
     5401 cattacgccc gtgaggtaga tgcaggattc atcgtgcgcg gcatccgttc tgcttcggat
     5461 tacgaatacg aacgttccat gcgccatatc aacagcgacc tcgcccccga aatatccacc
     5521 gtattcctca tgccgccgcg cgaaatcgcc gaagtgtcgt ccactatggt caaaggactg
     5581 gtcgggccgg aaggctggac ggaaacgatc caccgctacg tgccgcaagc tgtgtacgaa
     5641 aaaatccttg ccgaacatca acacgaaaat tgaacccttc tatttttgca aggcatatat
     5701 ggatatgttg gaaattttgt tccgccatca agacttcgtc gccatcaaca aaccgggcgg
     5761 catatccgtc caccaagaca gcggcgagac cggactggcc cgaacactcg ccatacagtt
     5821 gggcgtagag cgtgtgtggc tgctgcaccg attggacaaa cagaccagcg gcattttact
     5881 gtttgccctc aacagagaaa gcgcgtccgc ccttagcgga cagtttgccg gcaaaagcat
     5941 caaaaaaacc tatttggcac tatccgaccg caaaccgtcc aaaaagcagg gttggattaa
     6001 aggcggaatg gaaaaatcca gacgcggaat gtggaagttg acgcgcaata cagaaaatat
     6061 cgccgttacc cgattccaca gcatcagtat cgccgaaaaa ctgcggctgt tcatcctgga
     6121 accgcatacg ggcaaaacgc accaattgag agtggcgatg aaaagtttgg gcagtccgat
     6181 tctgggtgac agcttatacg gcggaacaga atccgaaacc atgtttctgt atgcatggaa
     6241 aatacaattt gcctaccaaa accgacaaat cgaaattgtt gcacccttaa aaaacgaatg
     6301 gcagactgaa aatatctctc atgcgctgga agaattttat atggcaaaag caggttaata
     6361 aatataaatt aatttataaa caatatgata aatattttta taaaaatttt tcaagaaaac
     6421 ggttgactgc aaatctcttc a
//
LOCUS       DAWEYF010000112         6407 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.112, whole genome shotgun sequence.
ACCESSION   DAWEYF010000112 DAWEYF010000000
VERSION     DAWEYF010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6407
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.112"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            176..1234
                     /gene="alr"
                     /locus_tag="WGN93_001535"
     CDS             176..1234
                     /gene="alr"
                     /locus_tag="WGN93_001535"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ0227429.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLIRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTKGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1298..2653)
                     /locus_tag="WGN93_001536"
     CDS             complement(1298..2653)
                     /locus_tag="WGN93_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ0227430.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVKRGGRIPAPVQSMK
                     N"
     gene            complement(2668..2940)
                     /locus_tag="WGN93_001537"
     CDS             complement(2668..2940)
                     /locus_tag="WGN93_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ0227431.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3066..3803)
                     /locus_tag="WGN93_001538"
     CDS             complement(3066..3803)
                     /locus_tag="WGN93_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ0227432.1"
                     /translation="MKKLSRIVFSIVLLGFSASLSAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAYAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGSKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIHHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4084..4983)
                     /gene="prmB"
                     /locus_tag="WGN93_001539"
     CDS             complement(4084..4983)
                     /gene="prmB"
                     /locus_tag="WGN93_001539"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ0227433.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5128..5721
                     /locus_tag="WGN93_001540"
     CDS             5128..5721
                     /locus_tag="WGN93_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227434.1"
                     /translation="MADGMGNLIGWEKTGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5833..>6407
                     /locus_tag="WGN93_001541"
     CDS             5833..>6407
                     /locus_tag="WGN93_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ0227435.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFGEGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVAKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVSTCFKADKSAEAVNNDTEHNTA
                     YFSHFPSKQKSTDGGRCPFLYRFPYFLAAGRA"
BASE COUNT         1753 a         1613 c         1468 g         1573 t
ORIGIN      
        1 atttgggaaa gcgattatat caggaaaagc aaaccgcctt cctacctaaa aactgctgct
       61 tcggcttgaa gatacaaggg tctttaatat tttaaaagcc ttgccgttgg attataattc
      121 cctaattgat ttcttaattt tgctaataaa cacttgtttg gtaaggaatg aatttatgcg
      181 ccctttgaac gtgcagatca ggttgggcaa ccttaggcac aattatcgga ttttgaagga
      241 aatgcacgga ggcaaactgt tggcggtagt gaaggccgac gcatacggac acggtgcggt
      301 cagatgtgct ttcgcgctgg cagacttggc agacggcttt gccgtggcga caatcgatga
      361 aggaatcagg ctgcgggaga gcggcattac ccatccgatt gtccttttgg aaggcgtatt
      421 tgaagcatcg gaatacgaag cggtcgaaca atactcgctt tggccggcag tcggaaacca
      481 atggcagctt gaggctttgc tgatccgcca ttggaaaaaa cccgtcaaag tctggttgaa
      541 aatggattcg gggatgcacc gtaccggttt tttccctcat gattacgctt cggcatatgc
      601 ggcattgaaa cagtcggaat atgtggacag tattgtcaag ttctcgcatt tctcctgtgc
      661 ggacgaaccc gaaagcggta tgacggaaat acagatggaa gcattcgatt tgggtacgaa
      721 agggctggaa ggcgaagaaa gccttgccaa ttcggcggct attttgaatg ttcccgaagc
      781 acgcagggat tgggggcgcg cgggcttggc gttatacggc atttccccgt tcggaggcag
      841 cgatgacagg ctgaaacccg tgatgaggct ttcaacccgt atttttggcg aacgcgtttt
      901 acagccgcac tcccctatcg gttatggcgc aacattttat accagcaaat ctacgcgcgt
      961 cggtctgatt gcctgcggtt atgcggacgg ttatccgcgc cgcgccccaa gcaattcccc
     1021 cgtcgccgtc gacggtaaat tgacccgggt catcggcagg gtctctatgg atatgatgac
     1081 catcgagctg gacgcttcgc aagaaggttt gggacacgag gtcgaactgt ggggcgatac
     1141 ggtcaacatc aatactgttg ccgaagcggc cggaaccatc ccttacgaat tgatgtgcaa
     1201 tatcaaacgt gcaaaattca cttatatcga gtaatcaagt ccaaacaaaa atgccgtctg
     1261 aagcctttca gacggcattt ccccatcaaa accgcaatca gtttttcatc gattggaccg
     1321 gagcgggaat tctgccgccc cgtttgacga acacttcgca cgaaccttct tttaccggca
     1381 tcacaggtgc gtagcccaac aggccgccaa actcgacgct gtcgccgacg gttttaccgg
     1441 ttaccggaat aatgcgcacg gcagtggttt tgctgttgat catgccgatg gcggcttcgt
     1501 cggcgatgat gccggaaatg gtatgagcag gcgtatcgcc gggaacggca atcatatcca
     1561 aaccaacgga gcagacagcg gtcatcgctt caagtttgtc caacgtcagc acaccggctt
     1621 cggcagcggc aatcatgccc tcgtcttctg aaacggggat aaacgcaccg ctcaaaccgc
     1681 cgaccgcgct ggaagccatc atgccgccct ttttcacggc atcgttcagc aatgccaaag
     1741 ccgccgtcgt gccgtgtgta ccgcagacgc tcaaacccat ttcttcaaga atgcgcgcca
     1801 ccgagtcgcc gacggcaggg gtcggtgcca acgacaagtc gagaatacca aacgggatat
     1861 tcagcatttt tgaggcttcg cggccgatga gttcacccac gcgggtaatt ttgaaagcag
     1921 ttttcttcac tacttccgca acttcggtca atgtcgttgc atctgaattt tccaacgcgg
     1981 ctttgaccac gcccggcccc gatacgccga cattaatcac agcatccgct tcgcctgagc
     2041 cgtgaaacgc gcccgccata aacggattgt cttccaccgc attgcagaac acgacgattt
     2101 tcgcgcagcc gaaaccttcg ggcgtaattt cagccgtgcg tttgatggtt tcgcctgcca
     2161 gcttgaccgc atccatattg ataccggcgc gcgtactgcc gacattgatg gagctgcaca
     2221 cgatgtcggt ggtcttcatc gcttcgggaa tggaacggat taacacctcg tctgaaggcg
     2281 acatgccttt ttgcaccaac gcggaaaagc cgccgataaa ggacacgccg atggctttgg
     2341 cagccttatc caaagtttgc gccacgctga cataggaatc ggcatgggta gccgccgcga
     2401 tttgggcaat cggcgtaacg gaaatgcgct gattcacaat cggcacgccg tatttggcag
     2461 acagatattt tgccgtcgcc accaagtctt tgccgaccgt ggtaattttg ttgtaaatgt
     2521 tttggttcaa cacattgata tcgctgctga tgcagtcgtg cagatcaatg ccgatggtaa
     2581 tggtgcggac atcaaaattc tggtcggcaa ccattttgac ggtttctaaa atttcgccgg
     2641 attggatact catcacattc ctccgactca aatgcggtgc atcgcttgga agatttcttc
     2701 attttgcata cggatatcaa gcgcgagttt tttgctctct tccgcaaaca aatccaaaac
     2761 ctcctgccga gatttggggc atttcgaggt atccaccaag ataatcatgg taaaaaaatc
     2821 atccatcagc tgttggctga tattgaggat gttgattcgg ttttccgcca aaattttgga
     2881 aacatcgtac acgatgccga cgcggtcttt accgatgacg gtgatgactg aattgttcac
     2941 aggcttactc cttgcagata tccgttaaag tccgaaatta taccaccgtt ggattttgaa
     3001 gaaatattgt caacaatata tacatacaaa atgccgtctg aaactatttc agacagcatc
     3061 aagattcagg gttcgattaa ataaccatcc ttatcccact gggttttcct gaccaacttg
     3121 tcatcctgat aaacagcttc actcttttta gaaccatctt cataccactc taagactact
     3181 ccattacgtt tatgatgatg gatagacagt tccgagagta atcgaccgct ttcatcccat
     3241 gtcagaatct tggccggctc atcattgacc ataaccattt ccgttttgat attgccatca
     3301 gcataccatt gtttccatac gccgtttgcc ttattttgtt taaactggat ttcgctttcc
     3361 ttgctgccat tacggtaata gcggtacccc gtaccttcac tcaaaccatt tttataaggc
     3421 ataaccgcag attttttacc gttcggatac cagttgaccc actcaccgtc cggcttaccc
     3481 ttgctgaagc cccccgccat ttttttctga ccattaaaat gccacaaaat caacataccg
     3541 ttttgcaggg taggcacaaa agatttgatt tgcgttgaag caacgatata aggttcggaa
     3601 tatttcttca tcgacggata ataaaaatcc tgcgcgtacg caataccctc cgccacacta
     3661 tattgcctga tataagcggc agaagacatc gtcgccgtca gtttcccgtt ctgattaaaa
     3721 taaacagaat aggtctgtgc cgataaagaa gccgaaaaac ccaacaggac aattgaaaat
     3781 acaatccgag ataatttttt cattgcaata gcgatataaa aacaaggctg tgttttagta
     3841 atctgttgat ttcaattatt tgcaagggaa aagacaatta ttttccggtt aggaataaac
     3901 ctattctact gaatatattg aagccaagta cgcctatcaa cactatatta aaacactgcc
     3961 aaaaacaatt aacttataaa caatatggta aggatttctc tgccaagcat caaacccgag
     4021 acaacgtatc gtaaaaatgc cgtctgaaaa caaatcgtct tcagacggca tttccccttc
     4081 aactcactct tcacccaata actgctcgcg cgtcaagagg aaaacaaaac cgtcgccccc
     4141 gctggtttcc aaccaagtaa aaggcaactc cggatacgct gcttccaata catccctgtt
     4201 atgcccgatt tccaccagca atacaccttt gggattcaga aactttgccg cattcagaag
     4261 aatctgcctg gtggcatcca acccgtccgc cccgctgccc aatgccaatt ccggttcgtg
     4321 caaatactct tcaggcaata actcaaccga ttccgcatcc acataaggcg gattggaaac
     4381 aatcaaatca taagtgcctt ccaatccttc aaacaaatcc gtatgaataa gccggatgcg
     4441 ttcttccaaa ccataatctt cgacattaat ccctgccact tccaaagcat ccaagctcac
     4501 atcaaccgca tcaatttggg catcaggata atgatgcgcc atctgaatgg caaggcaacc
     4561 gcttccggtg caaagatcca aagcattatg caccaactca tcgtattcta tccaaggacg
     4621 aagtccgtca cccaacaatt cataaataaa agaacgaggt atgattacgc gctcatccac
     4681 atagaaatca aactctccct gccatgcctg gtgtgtcaaa taagcggctg gaatgtgttc
     4741 gacagcacga cgctcaataa ccgtcagcac ttcctctttt tcagcttcca agagttttgc
     4801 atcaagatat ggggcaagca tatccaaagg caaattcaaa gtatgcagaa tcaaataagc
     4861 tgcttcatca tgcgcattat ccgttccatg accaaaaaag agccctgcct cattaaaacg
     4921 gctgactgca aaacgtaaaa catcgcggat agtcgtcaat tcttgtgctg cctgattaaa
     4981 cataatatga accattctgc gtatagatac ttttaattat aacagaaaca acaagcaaac
     5041 cttttcatat cgccaaataa ccacccaatc tacccataca actacataaa tgcccgcgcg
     5101 aaaaccatcg cccgaacgga aacgacaatg gccgacggta tgggcaacct gattggctgg
     5161 gaaaaaacgg ggcttgttgc cggtaagcag tggataaccg caaaagacga caaggtgtcc
     5221 gatgtctgca atgccaacgg cgagatgggc gtaatcgggc tttacgagcc tttctcacac
     5281 ggcgcattga cgatacccgg tcatccgaac tgccgatgcg aggttgtttc cgtatcgggt
     5341 ggcgaattgg gggaatttgc cgaaaaaaag gagcttcgta aagcggctat gcagtatgcg
     5401 cgggataact ttatcggcaa aagctatgtc aatgaaaaca gcgggcatga actgaaggta
     5461 acttggcaag gtgtgaaaca cgctgcgtca aaggcaaatc aggcggaatt atccatcatg
     5521 acaaaacttg atgacttatt gcgctacgca aaatatgagg gttcttattc ggataggaaa
     5581 ggtcatccta atattattgc agcacataag tatcgtgccg ttgccaaggt tgggaatgag
     5641 tctttaaata tcggtgtgat tgtaagggaa tttccagacg accataaaca ttacgaccat
     5701 ttcatcttga aggatgaata aagccctttt gcagtgtcgt tctggagcgg atagcgttaa
     5761 ggcaagtaca cttccagcct tgaaaaaggg ctttaaattc agcatgccat ttatacaggc
     5821 aggagtaaac ccatgacaaa gttatacgca gaaatcgcca agatggagac gcaggacgac
     5881 gacacggtca aggtttgggg ttacgcttca agcgaggaaa tcgattcgga cggcgaagtc
     5941 atcgcgacgg cagctatgaa ggcggcgatt cccgattata tgaagtttgg cgaggggcgc
     6001 gagatgcacg gctcaaacgc tgcgggaacg gcaattgaaa tcaacgttga agacgacggc
     6061 ataacctttt tcggtgctca tatcatcgac cccgttgtcg tggcgaaagt caaaacaggc
     6121 gtttacaaag gcttttccat cggcggcagc gttaccgccc gcgatgattt gaacaagtcc
     6181 caaatcacgg gcttgaagct gacggaaatc agccttgtcg accgccctgc caatcccgat
     6241 gcggtgtcta cctgctttaa ggcggacaaa agtgcggaag cggtaaacaa cgatacagaa
     6301 cataatactg catattttag ccatttccct tccaaacaaa aaagcaccga cggcggccga
     6361 tgccccttcc tttacaggtt cccctatttt ttagctgcgg gcagagc
//
LOCUS       DAWEYF010000113         6343 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.113, whole genome shotgun sequence.
ACCESSION   DAWEYF010000113 DAWEYF010000000
VERSION     DAWEYF010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.113"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(57..1511)
                     /locus_tag="WGN93_001542"
     CDS             complement(57..1511)
                     /locus_tag="WGN93_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ0227436.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(1508..2209)
                     /locus_tag="WGN93_001543"
     CDS             complement(1508..2209)
                     /locus_tag="WGN93_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ0227437.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(2206..2985)
                     /locus_tag="WGN93_001544"
     CDS             complement(2206..2985)
                     /locus_tag="WGN93_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ0227438.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            3269..4675
                     /locus_tag="WGN93_001545"
     CDS             3269..4675
                     /locus_tag="WGN93_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0227439.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADL
                     NESPLNMQLAVISYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLVGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            4787..6313
                     /locus_tag="WGN93_001546"
     CDS             4787..6313
                     /locus_tag="WGN93_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ0227440.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPKYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
BASE COUNT         1368 a         1830 c         1599 g         1546 t
ORIGIN      
        1 aaatgccgtc tgaagccctg tttcgggttt cagacggcat ttttgcgaac aactttttat
       61 gcctgttctt tttggcgcat tttttctgcc atcagttcgt gcagggtttt cttcgccggt
      121 ttcatcggca cgcggttttg cgtccaaccc aactgtttgc gcggggtcag gttgcggaac
      181 ttggtggctg cccaaccgaa ggcgcggtag gttttgctgc cgctgaaaat accgttgaat
      241 gtgcgccacg ccatttgttc gccgaaggta tgcgatgcgc cttgccctcg gatggggtgc
      301 ggcacggttt cggtcggcga acgttgcgct tcaacgcgca aacgctgcat ttgttcggta
      361 atcgggatgc gtaccggaca aacttccacg cacgcgccgc acatcgtgca ggcggttggc
      421 aagtcgcggg tggcatccag acccaacagg tgaggggaaa taatctcgcc aatcgggccg
      481 ggataggttg tgccgtatgc cgcgccgccg atacgggtat aaaccgggca atggttcata
      541 cacgcgccgc aacggataca ttgcaaggtg cggcgcattt ggtcttcggc ataggcttgg
      601 ctgcgaccgt tgtcaagcag gaccaagtgc atttcttgag gaccgtccag ctcttcgcta
      661 cggcgcgggc cggtaatcat attgaaataa gtggtaatgt tctgaccaat ggcagaacgc
      721 ggcagcaggc tgtacaaggg tgggatgtcg gacaatttcg ccaccacttt ttcaatgccg
      781 gtaatagcga tatgcacggg cggtacggtg gtactcaagc gaccgttgcc ttcgttttcc
      841 accagacaca gcgtacccgt ttcggcaaca gcaaagttta cgccactcaa accgacatcg
      901 gcagtgctgt aaatatcgcg cagggctttg cgggcgaagc cggtcagttg gtccacgtcg
      961 tccgtaagcg gagttccaag gttttggtgg aacagttcac tcacctgttc tttggttttg
     1021 tgaatggcgg gcatcacgat atgggtcggt ttttcgcctg ccatttggac gatgaactcg
     1081 cccaagtcgc tttctaccgc tttaatgcct tttgcttcaa gataatggtt cagctcgatt
     1141 tcctcgctga ccatcgattt gcctttgacc atcagcttgc cgtttttggc tgtgatgatg
     1201 tcgtggataa tttggcaggc ttcggtcggg gtttctgccc agtgcacttt cacgcccaac
     1261 ttagtcaggt tttcttccag ctgctccagc agggctggca atttagacaa tgagcgctga
     1321 cggacgtgtt cgcacaaatc gcgcaggctt tgcagctctt cttcgtcggt caaaacggct
     1381 ttgcgtttgg tcatcagcat atccatcgcg gtacgcaggc ttttgcgcaa aggcttgtct
     1441 tgaagggaaa ttgcggcgtt ttgcttgaaa gtttccggct tcatgtgaaa tttgatggtt
     1501 tgcgtagtca tgcgttttcc tccaaatcgg caggggaaat gtggtcgggc aggatggcga
     1561 ggatgaccaa atcgcgcggg ccgtgcgcgc cgtaagcaag cgtcagttgg atgtctgcgg
     1621 ttttggacgg gccggaaatc aggaatacat tggtcggcat accgttttcc accagttttt
     1681 cgccttcgac ggcattatga aactcgttgt acatcttgga cgtatcgaac aggcagaaat
     1741 gcacgggcgg aacgagactc aaagtacgcg gttcttcggg gctggaaaac agcatcagcg
     1801 tgccggtgcg ggcgatgccg cattgcgcgc cgctgaagcc cgcatcgatg ttcgtgaaaa
     1861 actcggtttt ccaagtatcg atttcgcgct cgaaggcaat cggttcgata ttgctgtccg
     1921 ccaatgcggc acgggcaatt tgtccgtgtt cggtcgccaa gggcagcagg atgtttttca
     1981 aacccttgcc ttctgccgct tcgcggaaaa cctgcatcca attgcttttc gtcacccaat
     2041 aaatttcggt tttgaccgca cgcatagcgg cagcccaatg tttcagacgc tcaacttcgc
     2101 tgccccaaga aacacccatt tcacggtaat aatcaaaaac cgcaggttct tccatcggca
     2161 atgcgtcggc ttttttcagt tttgccaaaa tattttcgcg cgcgctcatg ctttgcctcc
     2221 ggtacgttcc aacaagaagg atgcgatatg tttcggacgc ggcatattcg gttcgtcctt
     2281 agcaattttg ccgccgatgt tcatcataca gccgcagtcc gcgctgatga tttcggttgc
     2341 gccggtttct ttcagcgcgg cgactttgtc ggttaccatc gcgccggaaa tatcggcttg
     2401 tttgacggag aatgtgccgc cgaagccgca acattcgctt tcgtggtcgt ggacgatgcg
     2461 ttcgacgttt tccataccgt caatcagttg ccagcccgag agatggacat tcatttcgcg
     2521 gcgggcggcg caggaagtgt gaacggcgac tttgagcggt tcgcccttgt cttcgggttt
     2581 gaaaccgatg gcaagcagga aatgggtaaa ctcgatgatg cggccggcgc aatccacagc
     2641 cctttcctcg tactcgctgc ctttaaacag cgtcggccaa tggtgcttca tcataccgcc
     2701 gcacgaaccg gacggtacga caatcggcca ctcctcgggg aaaaggtcga gttgcgctct
     2761 ggcgacatca aaggcttcgg tcggatggcc ggatgaatag gcgggctgac cgcagcagct
     2821 ttgcgccatc gggaaatgga cgcgtatgcc ctgttgctcg attagggtaa tggcatccat
     2881 gcctgcttcg ggcataaaaa gatcaaggac gcaagtgccg aaaaaataga catcggtcgg
     2941 attgctgtcg tatcggatga tttttggggg aatggttgcg ctcatgtttt ttgataacgg
     3001 gaaacccgtt tttttctgta gaaaggtaag cgtttacttt aagtaattga ctgttgcggg
     3061 tcaagtctaa ttttaaaaaa taatccggtt tttcttacaa actaccccat aacgcttact
     3121 gtaccttaat ctgatagttt tcgataataa ttatcattac aatgcaatgc cggttcgttt
     3181 gcttgtgaac attcaagatg ccgactctga cggcattcag acagcatctg aaaacaataa
     3241 cggcacaagg atggggtaca atcgctctat ggaaaaaaac accctatccg cccgcgcacc
     3301 atccccttgg ctgccgcttc tgctggcaat tgccattttt atgcagatgt tggatgcgac
     3361 cattttaaat accgcactgc ctgaaattgc cgccgacctg aatgagtcgc cattgaacat
     3421 gcagctggcg gttatttcct acacgctgac ggttgccctg ctgattcctt tgagcggtta
     3481 tttggcggac aggttcggaa cgaaaaaagt ctttttcggt tcgattgccg tttttatgct
     3541 cggatcggca ttgtgcgccg catcgggttc gctgtttgaa ttgacgcttt cccgtgtcgt
     3601 tcagggcatc ggcggttcga tgctggttcc gataccgcgt ctgaccatct tgcgtgtgta
     3661 cgacaagtcc aagctgctca acgccatcaa ttatgcggtt atgcccgcat taatcggacc
     3721 ggttttaggg cctttggcgg gcggttatct ggtcgaatac gcttcgtggc actggatttt
     3781 cctgctcaac ctgcccatcg gtcttctggg tttcatattg ggacgcaaca tcatgcccga
     3841 tattaaaggc agcaatatct ctttagactt caaaggctat ctgatttttt ctgccgccgc
     3901 gtgcctcttg ttactttcgg cagaaagcct gtcgcacgcg ctgcctccgt attttgcact
     3961 gttgccgctg tgcggcggac tgctgtttgc acgccgttat ttccgacata tgaaaaccgc
     4021 gtccaaaccg atttattccg ccgacctgtt tctgatacgc actttccgtc taggactggt
     4081 gggcaatctg ttcagccgtc tcggcatcag ctcgattcct tttctgatgc ccctgatgtt
     4141 tcaagtcgct ttcggcttcg gcgcaagcct gtcgggttgg ctggtcgccc ccgtcgccct
     4201 gtcttcgctg ctggtcaaac cgctgattgc accgctcatg aaacgtttcg gctaccgcac
     4261 ggtactgctt tggaacacca agctgcttgc cgccttcatc atgctgctcg ccctacctga
     4321 tggaaactcg ccgctgtgga tttggatttt cctctcgctg gcgatcggcg cgtgcaactc
     4381 cctacagttt tctgccatga acacactgac cctcgccgat ttgcgcccgc aacagaccgg
     4441 cagcggcaac agcctgatgg cggtcaacca acagcttgcc atcagcatgg gcattgttgt
     4501 cggcgcatta atccttaaaa actggacatt tctgataccg gcttcttcag gtctgcattc
     4561 cgccttccgt atgaccctgc tcagtatcgg cggcattacc cttgcctcgt cgttggtttt
     4621 caagcgtctg cacgtttcag acggtgcaaa cctgacacgg aacacaccgt cctaaagcgg
     4681 tccgcacgca aaacttttac ccgtttcaac gtttggatta tgattccgca cttccatgcg
     4741 caccaacccc aaaacacagg caatgccgtc tgaaaccata tccctgatga aaacacgcag
     4801 cctaatttcc cttttatgcc tccttctctg ttcatgttct tcatggttgc ccccactgga
     4861 agaacggacg gaaagccgtc atttcaatac ttccaaaccc gtccgcctgg acaacatcct
     4921 gcaaatccgg cacacccctc ataccaacgg gctatccgat atctatctgt tgaacgaccc
     4981 ccacgaagcc tttgccgccc gcgccgccct tatcgaatct gccgaacaca gcctcgattt
     5041 gcaatactac atctggcgca acgacatttc cggccgactg ctgttcaacc tcgtgtacct
     5101 tgccgcagaa cgcggtgtgc gcgtacgcct gctgttggac gacaacaaca cgcgcggatt
     5161 ggacgacctc ctgctcgccc tcgacagcca tcccaatatc gaagtgcgcc tgttcaaccc
     5221 cttcgtctta cgaaaatggc gcgcactcgg ctacctgacc gacttccccc gcctcaaccg
     5281 ccgcatgcac aacaaatcct ttaccgccga caaccgcgcc accatactcg gcggacgcaa
     5341 tatcggcgac gaatacttca aagtcggtga ggacaccgtt ttcgccgacc tggacatcct
     5401 cgccaccggc agcgtcgtcg gcgaagtatc gcacgacttc gaccgctact gggcaagcca
     5461 ttccgcccac aacgccacgc gcatcatccg cagcggcaac atcggcaagg gtcttcaagc
     5521 actcggatac aacgacgaaa cgtccagaca cgcgctcctg cgctaccgcg aaaccgtcga
     5581 acagtcgccc ctctaccaaa aaatacagac aggacgcatc gactggcaga gcgtccaaac
     5641 ccgcctcatc agcgacgacc ctgcaaaagg actcgaccgc gaccgccgca aaccgccgat
     5701 tgccgggcgg ctgcaagacg cgctcaaaca gcccgaaaaa agcgtctatc tggtttcacc
     5761 ctatttcgtc cccacaaaat ccggcacaga cgcactggca aaactggtgc aggacggcat
     5821 agacgttacc gtcctgacca actcgctaca ggcgaccgac gttgccgccg tccattccgg
     5881 ctatgtcaaa taccgaaaac cgctgctcaa agccggcatc aaactctacg agctgcaacc
     5941 caaccatgcc gtccctgcca caaaagacaa aggcctgacc ggcagctccg taaccagcct
     6001 gcatgccaaa accttcattg tggacggcaa acgcatcttc atcggctcat tcaacctcga
     6061 cccccgttcc gcacggctca atactgaaat gggcgttgtt atcgaaagcc ccaaaatcgc
     6121 agaacagatg gagcgcaccc ttgccgatac cacacccaaa tacgcctacc gcgttaccct
     6181 cgacaggcac aaccgcctgc aatggcacga tcccgccacc cgaaaaacct acccgaacga
     6241 acccgaagcc aaactttgga aacgcatcgc cgcaaaaatc ctatccctgc tgcccataga
     6301 aggtttatta tagaaatgta gcggattaac aaaaaccagt acg
//
LOCUS       DAWEYF010000114         6269 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.114, whole genome shotgun sequence.
ACCESSION   DAWEYF010000114 DAWEYF010000000
VERSION     DAWEYF010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6269
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.114"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(63..623)
                     /locus_tag="WGN93_001547"
     CDS             complement(63..623)
                     /locus_tag="WGN93_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ0227441.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPA
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1040..2080)
                     /gene="mutY"
                     /locus_tag="WGN93_001548"
     CDS             complement(1040..2080)
                     /gene="mutY"
                     /locus_tag="WGN93_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ0227442.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2243..2377
                     /locus_tag="WGN93_001549"
     CDS             2243..2377
                     /locus_tag="WGN93_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine acetyltransferase"
                     /protein_id="HEZ0227443.1"
                     /translation="MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGI
                     "
     gene            2364..3188
                     /locus_tag="WGN93_001550"
     CDS             2364..3188
                     /locus_tag="WGN93_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEZ0227444.1"
                     /translation="MWVFEKAKKTEVADGRILGHEGIGIVEEVGEAVKNIKVGDKVII
                     SCVSKCCTCDNCKIQLYSHCCNGGWILGYMIDGTQAEYVRTPYADNSLVPLPDNVNEE
                     VALLLSDALPTAQLYSPAAIIVCDMDENRLKLAKELGATHTINPASGDVSKQVAAIVG
                     EDGVDCAIEAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKLEKLWIKKLAITTGL
                     VNANTTEMLMKAISSSSVDYTKMLTHRFKFSELEKAYDVFKHAAENQAMKVVLEAD"
     gene            complement(3212..3430)
                     /locus_tag="WGN93_001551"
     CDS             complement(3212..3430)
                     /locus_tag="WGN93_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227445.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3445..4083)
                     /locus_tag="WGN93_001552"
     CDS             complement(3445..4083)
                     /locus_tag="WGN93_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ0227446.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4264..6099)
                     /gene="edd"
                     /locus_tag="WGN93_001553"
     CDS             complement(4264..6099)
                     /gene="edd"
                     /locus_tag="WGN93_001553"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ0227447.1"
                     /translation="MNPTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NNTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDPIRFDSVTGELNVLINETE
                     WNAREVEQIDLGANQQGCGRELFAGFRSMTSSAETGAMSFGGEFA"
BASE COUNT         1387 a         1498 c         1770 g         1614 t
ORIGIN      
        1 ctaaatatct agcaaaaaag tgcggtcaaa attcaccgca cttttcgttt cgaacaatcg
       61 aattatttaa tcacgccaca tgccatacgt gggccgccac cgccaagtgg agctggatga
      121 tcggagtgat tatcaccacc cgtgtggatc ataatagagt gaccgcgaac atcatctaaa
      181 tgtttaagac gtggtgctaa aacaggattt gttgctgtgc catcatgcaa tacagttaat
      241 gcaggtaaat cacctaagtg tgcatcatct tgccatgggt aaccatgttg ttttgcacct
      301 ttaggatccc agtgaccgcc tgcgcctaaa ccagctgtca atttaccttc tttttctttt
      361 ggctcacagc ttgggttttc atggatgtgg aaaccatgta agccttcgct taatccttgt
      421 aaatcagggg taaacacaag accatagtta gattcagtaa tagtcactgt acccacatct
      481 ttgttaccgt ttgctggatc aagttgttgc actttcactt caatagaagc acctttaggt
      541 atcgtattat gctcgtgtgc ttgcgcaaca ccaactgaac atactgcact aaccgctagt
      601 gctaataagg ttttcatatt cattgcaatc tcctttattg cagtaaaaac tcgcgactat
      661 tttagtcaat tttgttttaa aagccgataa atttttacga aaattttaca ttaattgtta
      721 tttgcagaaa attagaaccc gttatcacgt cttggataaa tgccaaaacc attgtgattc
      781 agagaattaa aaagaaaaat ttcggaatcc tcatcctttt ctgaaacctg attgcggtat
      841 ccatggcttt gtctttgtca tttaagtttg tgttcatgtt tttgaccttc tttgcttttt
      901 aaatcctttt taaattgccg acttcttccg ttccaaatgt cccatttgaa cattatccca
      961 ccgcctaaaa tacgacccaa attcatcggt tgttcttgct gcgatacctg caaacaacag
     1021 ttcaatgggt ttattttgtt tattctaacc tattaccgtt taaataaatt tccaaaggct
     1081 tgggcaggcc gtaatctttc aaatgcgccg gctttatcca aatgccgtct gaagggcttt
     1141 cagacggcat ttgtccttca aacggcgtaa tcatcagcag ccggtgcgtc agacggtggg
     1201 tcagggcggt ttgttcgtcc atatctgcca tggtcaggga gaatttggcg gcaaagtcgg
     1261 aaagcccgtt caaactttca aaacacggca cgcaatacag cccgccccaa atgcctttgg
     1321 cggggcgttt ttccagcaaa atcgcgccgt cccggttgcg gacaatcagc cagtaaagcg
     1381 gcagggtcgg tacttcggcg gcggtttttt tgcgcggcag ctcggcggtg cggttttgct
     1441 tttttgcttc gcagatgtcc gccatcgggc attggtggca caagggtttc gtccgtttgc
     1501 acacggtcgc gcccaaatcc atcaaacctt gtgtataggc aggcatatcg gcgttttcag
     1561 acggcagcag gctttcggca agtgtccaga gcgagttttc aaattttttg tcctgcggat
     1621 tgccgtcgcg ggcgaacacg cggcagagta cgcgtttgac gttgccgtcc aaaatggttt
     1681 cgcggcggtt gaaggagaag gcagaaatgg cggcggcggt gcttctgcct acgccgcaga
     1741 gggtttccaa gtctttgcgc tccgacggaa acgtgccgcc gaattgcctg acgacttgtt
     1801 gcgcggcttt gtgcaggttg cgcgcgcggc tgtaatagcc caagcccgcc cacaacgaca
     1861 acacttcgtc ttgcggcgcg gcggcaagcg tctgaacggt cgggaatttt tctaagaagc
     1921 gcggatagta gtccaacacg gtggcgactt gcgtttgctg gagcatgatt tcggaaagcc
     1981 agacgcaata agggtttttg acctgccaag ggaggtggtg gcgaccgtgt tgtttttgcc
     2041 agcggatgag ccgttcggag aaggggatgg gtgtgttcat taatatcaat cggtggtttt
     2101 atttatattt aaaacggtat gttattgtat aacattgtga aaataattct tattgactta
     2161 ttttttgtag gggtatataa ctcatataaa gaaactttat tgcggtattg aaattattta
     2221 tcaacaagca aggagtatca gcatgaaagc aatggtttat cacggcgcaa acgacatccg
     2281 ttttgaagaa aaaccccgtc cgcagattat cgatccgacc gatgcggtgg tgaaaatcgt
     2341 caaaaccacg atttgcggta ccgatttggg tatttgaaaa ggcaaaaaaa accgaagtcg
     2401 ccgacggtcg tattctcggt catgaaggca tcggtattgt agaagaagtc ggcgaggctg
     2461 taaaaaacat caaagtcggc gataaagtca ttatttcatg cgtcagcaaa tgctgtactt
     2521 gcgacaactg caaaatccaa ctttattcgc attgctgcaa cggcggctgg attttgggct
     2581 acatgattga cggcacgcag gcagaatacg tccgcacgcc ttatgccgac aacagcctcg
     2641 tgccgctgcc cgacaacgtc aacgaagaag tcgccctgtt gttgagcgac gccttgccga
     2701 ccgcccaact gtacagcccc gccgccatca ttgtttgcga tatggacgaa aaccgtttga
     2761 aactggcgaa agagttgggc gcaacccata ccattaaccc tgcttccggc gatgtaagca
     2821 agcaagttgc cgctatcgtc ggcgaagacg gcgtggactg cgcgatcgaa gccgtcggta
     2881 tccctgcaac ttggaatatg tgccaagaca ttgtgaaacc cggcggccat atcgccgttg
     2941 tcggcgtaca cggtcaatcc gttgatttca aactggaaaa actgtggatt aaaaagcttg
     3001 ccatcactac cggcctggta aacgccaata ccaccgaaat gctgatgaag gcaatttcca
     3061 gcagctccgt cgattacacc aaaatgttga cccaccgttt caaattcagc gaattggaaa
     3121 aagcctacga cgtgttcaaa cacgccgccg aaaatcaagc gatgaaagtg gttttggaag
     3181 cggattaatc ggccttgaat cagttgtttt tttaagcgga tgccgtctga atgcgtttca
     3241 gacggcattt tttcagccgc gtagtatggg ctgtccggct gctgtcgaat gaactgaacg
     3301 ttatttttat tatgcggaag gcggatgggc attttagggg cagtatgtcg gagtggtgct
     3361 gccgtgtatg ccgactgcgc cgccaagcgg caaaatgccg tctgagactg gaaagggctt
     3421 cagacggcat ttttacgatg cgaatcaggc tttgggtttc aatgccgccg cttctttggc
     3481 gagacgggtg atggtgtccc agtctttgtt tttcacggct tctttcggcg tcagccatga
     3541 gccgccgacg cacaggacgt tgggcagtgc caagtaatcg ggcgcggtgg cgaggctgat
     3601 gccgcctgtc gggcagaagc gaacatcggc gtaagggccg tacagggctt tgagcatggc
     3661 tttgccgcca acgacttcgg cagggaagag tttgagggtg tcgatgccgt gttccaaagc
     3721 cagttggatt tcgcccgggg tggcaacacc gggaatcagg ggaatgccgc tgttgcggcc
     3781 ggctttggcg agggattcgt gcagacccgg gctgatggcg aaaaccgcgc ctgcgtcttc
     3841 gacggctttg agctgttcgg gattggttac cgtacctgcg ccgacgatgg cgttgggcac
     3901 ctctttggca atcaggcgga tggcatcgag gccgacaggg gtgcgcaggg tgatttcgag
     3961 ggtagggatg ccgccttcga caagggcgtg ggacaaatcg atggcggtgc ttaagtcgtc
     4021 aatcgccatt accggcacaa ctgcgccggc ggtcaaaatt tcgcgggggg tcagtttgga
     4081 catttcggtt ctccgggtag gatagggtat tttattaaga tgggacaggt tgtaggtcgg
     4141 attcaagaaa ccgacatctt ggacggctgt gtcggattcg agaatccaac ctacgtctat
     4201 cttaaaacgc ttgaataatt tttcagacgg ccttcggtct gaaaaggccg tctgaaacgc
     4261 gcatcaggca aattcgccgc cgaagctcat cgcaccggtt tccgcgctgc tggtcatgct
     4321 gcggaagccg gcgaagagtt cgcgaccgca gccttgttgg ttcgcgccca agtcgatttg
     4381 ttcgacttcg cgggcattcc attcggtttc gttgatcaga acgttgagtt cgccggtaac
     4441 ggagtcgaag cggatcgggt cgccggtacg aattttggcg atgttgccgc ccatcagggc
     4501 ttcgggggtc atgtggatgg aggccggaac tttgccggac gcgccggaca tacggccgtc
     4561 ggtcagcagc gccactttga agccgcggtc ttgcaggatg cccaaaggcg gggtcagttt
     4621 gtgcaactcg ggcataccgt tggcacgcgg gccttggtag cggacgacgc agacgaaatc
     4681 gcgttccaat tcgccgcgct caaacgcagc caacacttcg cgttggtcgt tgaacacgat
     4741 ggcaggcgct tcgataatgc ggcagccttc gcgcacggcg gacactttaa tcacgccgcg
     4801 accgatgttg cctttcatca ggcgcagacc gccgtctggg gagaacgggt tgtcggcttt
     4861 gcgtaggatg tcgtcgttgc cgctggtttc gggggcttct cgccattcga gtttgccgtc
     4921 gatgaggaaa ggctctttgg tgtagtggcg cataccgtgt ccgacgacgg tatcgacatc
     4981 gtcgtgcaac aggcctgcgt ccagcaattc gcggatgacg aaaggcagtc cgcccgctgc
     5041 ggtaaagtgg tttacgtcgg ccttgccgtt cggataaacg cggatgagca gcgggatgat
     5101 ggaggaaatt tcatcgaagt cgtcccagtt gagaatcacg ccggccgcac gcgccatagc
     5161 gacgaggtgc atggtgtggt tggtcgagcc gccggtcgcc atcagaccga tcagggcgtt
     5221 gataaaggat ttttcggtca acatttcgcc caaaggtttg atggtgttgt ttttaatgcc
     5281 gcgcgcgagg tgtccggcgg cgtagcgggt cagcgcttca cgcaggtcgg tgtaagggtg
     5341 gacgaaagcg gcggcaggga ggtgcacgcc catcatttcc atcatcattt ggttggagtt
     5401 tgccgtgccg tagaaagtgc aggtgcccgg gctgtggtaa gaacccattt cgcttttcaa
     5461 aagttcgttg cgtccgacct tgccttcggc gaaaagctgg cgggtgcggg ctttttcttt
     5521 gttgccgata ccgctggaca tcgggcctgc ggggacgaag atacctggaa tatgaccgaa
     5581 cgaaagcgcg cctatcatca agcctggaac gattttgtcg catacgccca taaacaggct
     5641 gccgtcaaac atttgatgcg acagcccgac ggcggtactc atggcaatca cgtcgcggga
     5701 gaacagcgac agttccatac cggcgtagcc ttgcgtgatg ccgtcgcaca tggcgggtgt
     5761 gccgccggcg acttgggcgg tcgcgccgtt tttctgcgct tcgtctttga tttggtcagg
     5821 gaagtcttta aacggctggt gtgcggaaac catgtcgttg taggcggtga tgatgcctaa
     5881 gttggggacg gtttcctgaa gcatttcgat tttgatgctt ttgggcatgg cggcatagcc
     5941 gtgcgccaaa ttgctgcagc cgagttggtt gcgctccaag cgtcccattt gtttggcgct
     6001 gcggattttc gccagatatt tttcacgcgt cggacggctg cgttcaataa tgcgcccggt
     6061 gatttcggcg agtttggagt ggataggagt ggggttcatg ttcggtctcc tgtcggaagt
     6121 gggtggtatg gggattttgt ttgcgcgttt ctgatttttt gtattgggtg tggggaattt
     6181 ggcgtttcag acgacctttc aaatcttaca aggggtcgtc tgaaaacctc actatagtgg
     6241 attaacttta aaccagtacg gcgttgcct
//
LOCUS       DAWEYF010000115         6262 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.115, whole genome shotgun sequence.
ACCESSION   DAWEYF010000115 DAWEYF010000000
VERSION     DAWEYF010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6262
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.115"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(391..825)
                     /locus_tag="WGN93_001554"
     CDS             complement(391..825)
                     /locus_tag="WGN93_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ0227448.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WGN93_001555"
     CDS             complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WGN93_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ0227449.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1556..2398)
                     /locus_tag="WGN93_001556"
     CDS             complement(1556..2398)
                     /locus_tag="WGN93_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ0227450.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGE
                     DKGTGIKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            2653..3291
                     /locus_tag="WGN93_001557"
     CDS             2653..3291
                     /locus_tag="WGN93_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ0227451.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3743..4543)
                     /locus_tag="WGN93_001558"
     CDS             complement(3743..4543)
                     /locus_tag="WGN93_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ0227452.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(5522..6163)
                     /locus_tag="WGN93_001559"
     CDS             complement(5522..6163)
                     /locus_tag="WGN93_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ0227453.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMMMSEKSGVPLYFDRAL"
BASE COUNT         1672 a         1568 c         1296 g         1726 t
ORIGIN      
        1 ggtatagcgg attaacaaaa accagtacgg cgttgcctcg ccttaactca aagagaacga
       61 ttctctaagg tgctgaagca ccaagtgaat cggttccgta ctatttgtac tgtctacggc
      121 ttcgttgcct tgtcctgatt tttgttaatc cactataaaa attagaaatg cacattttca
      181 ttattctcgc gcaggcagga ctccagactt acccatttca gtaatgtttg aaaataaaag
      241 aaaaatcaga tgtttgtatt cccgcctgcg cagaaatgga gacggcgctc tgtcgtctca
      301 tttttgtttt aatcaactat atatagctga ttaaacataa gaaatgccgt ctgaaagact
      361 ttcagacggc attcgttcaa gcgtcgaact ttattgcgcc ttggtttcgg ttacaaaacc
      421 gattttggtg attcctgcct gacgggcggc ttctaaagct ttgtttacat aatcgtattc
      481 caccgccttg tctgccgcaa tcgccacaat cacgttttca ttctgctcct tggcggcttt
      541 cagacggctt tccacttccc cgatttccac tttgcttgca gaatccccgc cgacataata
      601 gccgccgttc gcatcaatcg tcaggcgcag ggggtcttta ggctgtttgt cctgcttgtt
      661 tgtctgctcg gacgcggtcg gcagttccaa agggatggaa tgcgtcagca ccggcatagt
      721 aatcataaac acaatcagca acaccagcat cacgtccacc aacggcgtaa cgttgatgtc
      781 ggacatcgga gaatcgtcgc cggaattcat cgaaccaaat gccataatca gctatccttt
      841 tgattaagca ggcggacgtg caaatcgtgc gccatcgcat ccaaatcctg ggtcagtatt
      901 tttgtgccgc gattgaggaa gttgtatgcc aacaccgccg gaatcgccac gaacaaaccc
      961 gccgccgtcg ccaccagtgc ctcgccaatc gggccggcaa ccgccgcaat actcatctgc
     1021 ccgctttgcc cgatattgat cagggcgtgg taaatccccc aaaccgtgcc gaacaacccg
     1081 ataaacggcg cggtcgcgcc gatggaggca agcgcggtca tcccgtaatc aaaccggcgc
     1141 ataatctgcg ccatactgtt gcggatttga atgaccaaat actcgttcaa cggcaaagcc
     1201 tgcgccagtt cggacgcttc gtttcggcgg tagttgcggt aagactgcaa tgcctcttgc
     1261 gccagtttgg acaaaggcgc atcgacggcg cgcacttttt cgaccgcgtc gttcagcgac
     1321 aaagtatcgc gcatatgccg tttgacggcg gcattccctt tgcgcgcccg atacagcttg
     1381 atgcagcgca agacaaccaa acaccacgtt acgatactca tcaacagcat caacacaaac
     1441 acaccgatca ggacgggatc gcccgattca aacactaatt tcaaattcat aatgattcca
     1501 acactgaaaa aaccaatcaa acatccaagc tgccgcaaac cgctgcggca accgcctaat
     1561 tcaattcaaa cttgacgggg actttaaact ccgtccaggc attggcttga aaatgcccgt
     1621 tttgcgccgc cttgcgtgcc gcattgtcca accgggaaaa accactgctt ttcacgattt
     1681 taacggactc aacatgaccg cccggagaaa ccaaaacgct caaaacaacc gtaccctgct
     1741 catcattctc catagaaagc gtgggataag ccgggcgcgg aatgctgccg ttggcgcgta
     1801 aaggattgcc tttgctgctg ccggctcctt ccccgtgttc gcctttgaca ccgccgctac
     1861 ctttgccgct gccttctccg cgccccgttc cgtctccttt gataccggtt cccttatctt
     1921 ccccattgcc ctgctcgctg tctgctttgg cagaagcatt gccgggatgt tcggcaggtt
     1981 tttcagacgg cttctcgacc ggtttttccg ccggtttcgg gacaggcttc gcttccggct
     2041 taggctctgg tttcggtttt tcttcgggtt tcggcttttc ttcaggtttc ggctcttcct
     2101 taggctgctg aatatccgca tccgcctttt tcgtaaccac cggcttcaaa accggcttgg
     2161 gcggctcgac aggtttgggc ggctcgggca cgggttgcgg ttcgggcgcg gcaggcgcgc
     2221 ctgcaccttc gggtgcgccg tcccctccgc caaaatcgcc caaatcgaca aattcaataa
     2281 cattgcctga ctctatcacg ggcagcttgt gcgcctgcca gagcaatgcc accattgcca
     2341 aatgcagcag tgcgacggaa aacacgactg cgggggttaa aattcgttct ttatccataa
     2401 ttcgggcata ataatagcaa caattcctat ttgcaaccta tttttacaat ttttggtcat
     2461 atgaatgtct gttccgttca caggcaaacc gtgtttaaac gctgtattac agcaaatcat
     2521 cagataacgg gccggcagaa aaaatgattc cgtctgattt cttattccaa taaaatcagg
     2581 ttagatgata tattgccgct tctgtctgtc agccgtttcg ggctgcacac cacatctgtt
     2641 caaaggaaaa ccatgtttca aaattttgat ttgggcgtgt ttctgcttgc cgtcctgccc
     2701 gtgctgctcg ccattaccgt cagggaggtg gcgcgcggct atacggcgcg ctactgggga
     2761 gacaacactg ccgaacaata cggcaggctg acactgaacc ccctgcccca tatcgatttg
     2821 gtcggcacaa tcatcgtacc gctgcttact ttgatgttta cgcccttcct gttcggctgg
     2881 gcgcgtccga ttcctatcga ttcgcgcaac ttccgcaacc cgcgccttgc ctggcgttgc
     2941 gttgccgcgt ccggcccgct gtcgaatctg gcgatggctg ttctgtgggg cgtggttttg
     3001 gtgctgactc cgtatgtcgg tggggcgtat cagatgccgt tggctcaaat ggcaaactac
     3061 ggtattctga tcaatgcgat tctgttcgcg ctcaacatca tccccatcct gccttgggac
     3121 ggcggcattt tcatcgacac cttcctgtcg gcgaaatatt cgcaagcgtt ccgcaaaatc
     3181 gaaccttatg ggacgtggat tatcctgctg cttatgctga ccggggtttt gggtgcgttt
     3241 attgcaccga ttgtgcggct ggtgattgcg tttgtgcaga tgttcgtctg actggctttc
     3301 agacggcata aacgctccag aaaacgcggc aggacatatt gccctgccgc gttttcctgt
     3361 agtgtaatct tatttttttc atcattatta gaaccaagtt gcatgataat acctttcatt
     3421 aactgaaaca ctgattaaga aactccagtc tgtctaatga tgaggttttc acatcgccaa
     3481 aacttgccaa tcaaatgctg gatttattgc cgtctgagat ttggtcaaat ccaaaggcga
     3541 cattcttaga ccctgtgtgt aaatcagggg tatttttgcg tgaaatcgtc aaacgcttgg
     3601 atgaaggctt ggccaatcaa ataccagata aacaaactcg cattaaccac attttaaaaa
     3661 atcaagtttt tggaagtact gccacgtatg taggtagctt tgaccgatat ttgcataaaa
     3721 actcctttgc tggtgaaagg aattattttg ccaattttaa aatatttctg gcaccaaata
     3781 gtacaatgac aaagacaatc atgccaatga ttaaatcagg atagctagaa tgagtcaata
     3841 acgtcaatgc tcccgccgct atcacaccga tattgatgat aatgtcattg gatgtaaaaa
     3901 tcatgctggc tttgatatgg atttctttat tttgattttt gctcagtaga tataagcaca
     3961 gccagtttgc aatcaatgcc aaaaatgccg tgccaatcat cagttgataa ttgggcagct
     4021 gctcagcacc gataaaacgc ctaatcactt ctatcacccc aaataacgcc aatattatct
     4081 gcgttatccc cgccaaaaat gccacacgtt ttttatacgc cagcgtcata ccaatggctg
     4141 atagcgccaa tatatagaca aagctgtccg ccagcatatc tagactatca gcaatcagcc
     4201 ccatagaatt agcaaaaata ccaaccgaac actctatgat aaaaaacaca aagttaatca
     4261 tgagcacttg atataataat cttttttcta agtgctcatc aggcttgtta aacactatct
     4321 tatcaacaat cacttcggtg gaaatgatat gactatcaaa attaagcggt tcaagtactt
     4381 gtaaaatcgt tgtatcttga ttatcgtgat agacggttaa gcaccgccca gcaatatcaa
     4441 actgtaattc ataaatatca gacacatctt ttaaacgcat gcgaatgagc tgttcttcgg
     4501 acgggcagtc cattttggta atgttaaaaa tggtcttttt catctattta gttccttgtt
     4561 ttgatcaggt tggctcaaat aaatctgtgt ttatattgct gcttggtaat ttttggatgg
     4621 tttgagtaaa ttgattaggt taaaatttac ctttggaagt accgccacgc ataatagttt
     4681 agatatgttt ataatctctg gataaaaaaa cgtaataagt gtttgctgga taacaaagtc
     4741 caaaccaata gcagataaaa taaggcatcc accccctttc ttcattaagg ataagagata
     4801 tcgagaaaca aatcataact aaacagaaaa aattttggag ataaagccat ttcattcccc
     4861 tattcaagaa tctggccaag ataggtattt tgtatactct agaaaagaaa ggcatttcca
     4921 agggaaacat atcagataaa aacttttgtt tattttttac tatagataga accctatttc
     4981 tcaagataaa tccaaatgca atgccaatta tcattattaa taaacaaagg atagtataac
     5041 tatggataac cttcattaaa caaaaagaag aaatggcaga taaattacat acgatatagt
     5101 ggaatataaa atatttacgg tctaaacctt gttcagttgc aattttttta tacttacctt
     5161 gcgcaaaaaa atcaaagaaa tccattaaac tatctttcac attagaaatt taaaagctaa
     5221 ataatacaac aaacaatgtg aagtactatt catggtttat ttaaaaaata atactattct
     5281 gaacattatt tagatacaga aattaacaaa ttagaactaa acaagctttt aaatacttta
     5341 attttattgg aaagctataa aaggaactat aactttacac actagtcact tctttttaag
     5401 aggcaaaagg gattgggaag gtcgtcttgg agataagcac tggtatttcg gccaatggta
     5461 aatagagttt acctcaaata gggtagaacc tccttcatct gtcagttaat aacagccact
     5521 tttacaatgc cctgtcaaaa taaagcggca cgcccgattt ttcactcatc atcatcaaat
     5581 aacccatcac cttttgaggc cattcgatac cgcgcaccac ggtcagattc ctcaaaacgg
     5641 ggaaaaccaa aatatcctcc atgccgattc cgccgttgat gccgtctgaa gcaccgtcca
     5701 tcaaattctc caactcttgc aaatctgcgt ttatgcgttc gagatattgg gcggttttat
     5761 tcaaattggc ggaaaagctg ccgatgcttt tctctttttt gtctgtaaaa tattttaccg
     5821 cttccggcgt tgcaaattcg ggcagcccga ttttgatcac gcgcggctgc accagtttgt
     5881 cgttgtatcc gcccaccttg tccagccacg cccgtatctc ggggcggact tcgtctttca
     5941 gacggtcttc gcggtcgaaa tgccgcacaa tgtccaaact ctcgcccata aacgaaccgt
     6001 cttctttttg caggacgggc acttgtttcg caccgatcat accgatcggc gttgcctcgt
     6061 cgtcgtttgc cagcacggct tcttcaacgt ccgcgccaaa cagcccggca gccatccgcg
     6121 cacgcacaca aaacgggcaa tggtcgtaaa tatacagttt catcaaaata ttcctcgtca
     6181 acctgtcggt accggctacc ttaacacccc gcgccacccg aaacaagttt atcttcccgc
     6241 ctatgcaccg taaataaata ag
//
LOCUS       DAWEYF010000116         6255 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.116, whole genome shotgun sequence.
ACCESSION   DAWEYF010000116 DAWEYF010000000
VERSION     DAWEYF010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.116"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..1010
                     /locus_tag="WGN93_001560"
     CDS             <1..1010
                     /locus_tag="WGN93_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein"
                     /protein_id="HEZ0227454.1"
                     /translation="EPHVPVSIPTATPLPKGEVTLSSDNGNIENINTANTETHPPRRT
                     RRSLYASPQNTSSGISIQQREVEKIYFGVKSPEKSFIFQTPGGAQYALSSYADPIVPS
                     YSSPDFKIPDRHAGQRLADGSRIFICCSDSGATSYAEITKQDYMKFGAWIGPNGEIDL
                     FAGGFPVGKTPPPAFSYGNSTPETALSKGKITYQVWGIRVRNRQFVTSSYTPPKSGSY
                     YGTLANTPVLSFITANFNSNKLAGEIRGNSDYGPSVKIENATINSLSFSGTATSGGKT
                     GNLEGKFFGKFNGYRDTETSIGGKITFDGDRSLDTVFGGVSYKKELENNTDTSTTHLT
                     K"
     gene            1041..3473
                     /gene="hupB"
                     /locus_tag="WGN93_001561"
     CDS             1041..3473
                     /gene="hupB"
                     /locus_tag="WGN93_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HEZ0227455.1"
                     /translation="MPIPFKPVLAVAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDIEIKNDGYVYNPTDTNGPSKWLDYVATGVARSQPDPQEWVNKSTLFKL
                     GYNFNDQNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRSGVEY
                     KNELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDKRGINGEVYHSFRHIRQNTAQWT
                     ADFEKQLDFSKAVWAAQYGLGGGKGDNANSDYSYFAKLYDPKILTSNDGKITMLIENR
                     SKYKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAH
                     AGFSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPELKAEKAK
                     NWELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDGTALVSSP
                     VWQNQNRSAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINAL
                     SPWTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLF
                     DLSAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVNNHTHAGIQRFTSP
                     GRSYNFTIEAKF"
     gene            complement(4061..5695)
                     /gene="groL"
                     /locus_tag="WGN93_001562"
     CDS             complement(4061..5695)
                     /gene="groL"
                     /locus_tag="WGN93_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ0227456.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGMGGMM"
     gene            complement(5788..6078)
                     /gene="groES"
                     /locus_tag="WGN93_001563"
     CDS             complement(5788..6078)
                     /gene="groES"
                     /locus_tag="WGN93_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ0227457.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGSRRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT         1525 a         1847 c         1520 g         1363 t
ORIGIN      
        1 ccgaaccgca cgtccccgtg tccatcccca ccgccacgcc gctgcccaaa ggcgaggtaa
       61 cgttatcaag cgataacggc aatatcgaaa acatcaacac cgccaacact gaaacacatc
      121 cgccgcgccg caccagacgc tccctctatg cctccccgca aaacacatcc tccggtattt
      181 ccattcagca gcgggaagta gaaaaaatct atttcggtgt taaatcacca gaaaaatcat
      241 tcatcttcca aacacccggc ggcgcgcaat acgccctttc atcctacgcc gaccccatcg
      301 tccccagcta ctcctccccc gatttcaaaa ttcccgaccg ccacgcaggg cagcggcttg
      361 ccgacggcag ccgcatcttt atctgctgca gcgactccgg ggctacttcg tatgcggaaa
      421 ttaccaaaca agattatatg aaattcgggg cgtggatagg tcccaacggc gaaatcgacc
      481 tcttcgccgg cggcttcccc gtcggcaaaa cgccacctcc tgcgttctcc tacggcaaca
      541 gcacgcccga aaccgcattg tcgaagggca aaatcactta tcaggtttgg ggcatccgcg
      601 tcagaaacag gcaatttgtt acttcctctt atacgccgcc gaaaagcggt tcttattatg
      661 ggacacttgc caacaccccc gtcctttcct ttatcactgc caatttcaac agcaacaaac
      721 tggcaggcga aatccgcggc aacagcgatt acggaccgag tgtgaaaatt gaaaacgcaa
      781 cgattaacag tttatccttt tccggcactg ccacgtccgg cgggaaaacc ggcaatttgg
      841 aaggcaagtt ttttggaaaa ttcaacggct accgggacac tgaaaccagc ataggcggca
      901 aaatcacctt tgacggcgac cgctccctcg ataccgtatt cggcggtgtg agttataaaa
      961 aagaacttga aaacaacact gatacaagta ccacccatct cacaaaataa taatcaatcc
     1021 gcttttaaaa aggttttctt atgcccatcc ccttcaaacc cgtattggct gtcgccgcca
     1081 tcgcccaagc gtttcccgcc tttgcggcag accccgcgcc gcagtccgcc caaacgctga
     1141 acgaaatcac cgttaccggc acgcacaaaa cccaaaaact cggcgaagaa aaaatccgcc
     1201 gcaaaacctt agacaagctc ttggtcaacg acgaacacga cctggtgcgc tacgaccccg
     1261 gcatttccgt cgtcgaaggc ggcagggcgg gttctaacgg ctttaccata cgcggcgtgg
     1321 acaaagaccg cgtcgccatc aacgttgacg ggctggcgca ggcggaaagc cgctcttccg
     1381 aagccttcca agaattgttc ggcgcgtacg gcaacttcaa cgccaaccgc aacacttccg
     1441 agccggaaaa cttttccgaa gtaaccatca ccaaaggcgc ggactcgctc aaatccggca
     1501 gcggcgcatt gggcggcgca gtcaattacc aaaccaaatc cgcaagcgat tatgtttccg
     1561 aagacaagcc ctaccatttg gggataaagg gcggcagcgt cggcaaaaac agccaaaaat
     1621 tcagcagcat caccgccgcc ggcaggctct ttggtttgga tgccttattg gtttataccc
     1681 gccgcttcgg caaagaaacc aaaaaccgct cgaccgaggg cgatatcgaa attaaaaacg
     1741 acggatatgt ctataacccg accgatacaa acggacccag caaatggctg gattacgtag
     1801 ccacaggggt tgcacgctcc caacccgacc cgcaagagtg ggtaaacaaa agcaccttgt
     1861 tcaagctggg ctacaacttc aacgatcaaa accgtatcgg ctggattttt gaagactcgc
     1921 gcaccgaccg ttttaccaac gagctgtcta atttgtggac gggtacgacc acgtctgccg
     1981 caacgggcga ctaccgccac cgccaagacg tgagctaccg ccgccgctcc ggcgtcgaat
     2041 acaaaaacga attggaacac ggcccgtggg acagccttaa gctgcgctac gacaagcagc
     2101 gcatcgatat gaacacttgg acttgggaca tcccgaaaaa ttacgataaa agaggcatca
     2161 acggcgaggt ttaccattcg ttccggcata tccgccaaaa caccgcgcaa tggactgccg
     2221 attttgaaaa acaactcgac ttttccaaag ccgtttgggc ggcgcaatac ggcttgggcg
     2281 gcggcaaagg ggacaatgcc aactcggatt acagctattt cgcaaaactg tacgacccca
     2341 aaatcctcac tagcaacgat ggcaaaatca cgatgctgat cgaaaaccgg tcgaaatata
     2401 aatttgccta ttggaacaat gcgtttcact tgggcggcaa cgaccgcttc cgcctgaatg
     2461 cgggcatacg ctacgacaaa aacagcagca gcgcgaaaga cgatccgaaa tacaccaccg
     2521 ccatccgggg acagattccc catttgggtt cggaacgcgc gcacgcgggc ttcagctacg
     2581 gcacggggtt cgactggcgg tttaccaagc atctgcactt gttggcaaaa tacagcaccg
     2641 gcttccgcgc gccgacttcg gacgaaacct ggctgctgtt cccacacccc gatttctacc
     2701 tgaaagccaa ccccgaactg aaagcggaaa aagccaaaaa ctgggaattg ggtctggcgg
     2761 gcagcggcaa ggcgggcaac ttcaagctct caggcttcaa aaccaaatac cgcgacttta
     2821 tcgaactgac ctacatgggc gtttcgtcag acgataaaaa caaccccaga tacgccccgc
     2881 tttcagacgg cacggcattg gtcagctcgc ccgtttggca aaaccaaaac cgctccgccg
     2941 cctgggtgaa aggcatagag tttaacggca cttggaacct cgacagcatc ggcctgccca
     3001 aagggctgca caccggcctc aacgtcagct acatcaaggg caaggcaacg caaaacaacg
     3061 gcaaggaaac gcccatcaac gcgctttcgc cgtggacggc ggtttacagc ctgggctatg
     3121 acgcgccttc caaacgctgg ggcatcaacg cctacgccac gcgcaccgcc gccaaaaagc
     3181 cgtccgacac cgtccacagc aacgacgact tgaacaaccc atggccttat gccaaacaca
     3241 gcaaggccta tacgctgttc gacctttccg cctacctcaa catcggcaaa caggttacgc
     3301 tccgcgccgc cgcgtacaac attaccaaca agcagtacta cacttgggaa tctttacgca
     3361 gcatccgcga gttcggcacg gtcaaccgcg tcaacaacca cacccacgcc ggcatccaac
     3421 gtttcacctc gccgggcagg agctacaatt tcaccatcga agcgaagttc taagctcctg
     3481 atgtgccaat gccgtctgaa acccgatgat ttgggtttca gacggcattt tttacagtcg
     3541 caccgccgcc ccctttcagg cttgtaccaa gcccaatccc gcaactctcc gtcattcccg
     3601 cgactctccg tcattcccac ggaagtggga atctagaaac gcaaagctgc aagaatttat
     3661 cggaaatgac tgaaactcaa cgaacctgga ttcccgcctg cgcgggaatg acgaagctat
     3721 ccgcacagaa acctgcacca cgtcattccc acgaaagtgg gaatccagaa cgtaaaatct
     3781 gaagaaaccg ttttatccga tacgtttccg caccgacaga cctagattcc cgctttcgcg
     3841 ggaatgacgg cggaaaggtt gctgtttttc cgataaattc ctgccgctct tcgtttttgg
     3901 gatggcggga aataaaacaa aagcgcgcgt atcaaaaaat aacaatgcaa agaacggtgt
     3961 tggcaatttt aaggtttgcg ccttagccgc acttattcgc aaaaaaaccg cacggcgttg
     4021 accgtgcggc ttgttgtctg aaggcttcag acggcattgc ttacatcatg ccgcccatac
     4081 cacccatgcc gcccatatca ggcacagccg gtttgtcttc ggggatttca gcgatcatgc
     4141 aatcagtggt cagcatcaag ccggcgatag atgcggcgtg ttgcagcgcg gaacgggtta
     4201 ctttggcggg gtcgagtacg cccatttcga tcatgtcgcc gtattcgccg ctgccagcgt
     4261 tgtaaccata gttgcctttg ccttccaaca ctttgttcac aaccacgctg ggttcgccgc
     4321 ctgcgttggc aacgatttgg cgcagcggag actcaacggc gcgcaagacg atttgtacgc
     4381 ctgcgtcttg gtcggcattg ccggtgtgca ggttttccaa agcagcacgg gcacgcaaca
     4441 gggctacgcc gccgcctgca accacgcctt cttcaacggc tgcgcgggta gcgtgcagcg
     4501 cgtcttccac gcggtctttt ttctctttca tttcgacttc ggtcgcggca ccgactttga
     4561 tgactgccac gccgcctgcc aatttagcca cgcgctcttg cagtttttct ttgtcgtaat
     4621 cgctggttgc ggtttcgatt tgttggcgga tttcggcaac acgcgcttcg atttgggctg
     4681 cgtcgccaaa gccgtcgatg atggtggtgt tttctttacc gatttcgatg cgtttggctt
     4741 gacccaagtc gtccaaagtc gctttttcca aagacagacc gacttcttcg gaaatcacca
     4801 cgccgccggt caggatggcg atgtcttgca acatcgcttt gcggcggtcg ccgaagcccg
     4861 gggctttgac ggcaacggtt ttcaggatgc ctcggatgtt gttcacgacc aaagtcgcca
     4921 aggcttcgcc ttctacgtct tcagcgataa tcaacagcgg acggctggct ttcgccactt
     4981 gttccaaaac aggcagcaag tcgcggatgt tgctgatttt tttgtcgaac agcaatacaa
     5041 acggattgtc caaagcagcg atttgttttt ccgcgtcgtt gatgaagtaa ggagacaggt
     5101 agccgcggtc gaactgcata ccttcaacca catccagctc gttttccaaa gatttgccgt
     5161 cttcaacggt aatcacgcct tctttgccga ctttttccat cgcttcggcg ataatcgcgc
     5221 cgacttgttc gtcagagttg gcggaaatcg agccgacttg ggcgatttct ttagaagtgt
     5281 cgcaaggttt ggcgatgttt ttcagctcgt caaccaaagc ggcaacggct ttgtcgatac
     5341 cgcgtttcag gtcggtcggg ttcataccgg cggtaacgta tttcatacct tcggcaacga
     5401 tggattgcgc caatacggtg gcggtagtcg taccgtcgcc cgccacgtcg ttggttttgg
     5461 acgcgacttc tttcaccatt tgcgcgccca tattttcaaa cttgtctttc agttcgattt
     5521 ctttggcgac ggttacgccg tctttagtga tgtgcgggcc gccgaatgca cggtcaacga
     5581 ctacgttgcg acctttgggg cccaaggtta cgcggacggc gtttgccaga atgttcacgc
     5641 cgtttaccat tttttgacgg acttcattgc cgaattgtac gtcttttgct gccatttcaa
     5701 ttctccaaaa atcattaaaa ctgtctgata aaaccgttta tgccgtctga aggcggtttg
     5761 ccgtttcaga cggcatcgtg tccgtattta tttttcaacg atgccgaaaa tatcctcttc
     5821 gcgcatcacc aacagctctt cgccgtcggc ttttacggtt tgaccgctgt atttgccgaa
     5881 gatgattttg tcgccgactt taacatccag cggacggcgg ctgccgtctt tgccgatttt
     5941 gcccgcaccc acggcgatga cttcgcccat atcgggtttt tcggcggccg cacccggcaa
     6001 aacgatgccc gatgcggttt tttcttcagc ttccaagcgt ttgacgacga cgcggtcgtg
     6061 taaaggacgg atggtcatat ttatgctccg ataaatggtt tgaaaacaat catctgcccg
     6121 aacggttcgg acagattgaa gtggaaaccg gacagccgtc aggcggctgc ccgtataagt
     6181 cggcaaaatt agggtgtgtg cgggcaaatt caagtgaggc ggaaaaaatt tatttccgcc
     6241 gttttttata gtgga
//
LOCUS       DAWEYF010000117         6246 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.117, whole genome shotgun sequence.
ACCESSION   DAWEYF010000117 DAWEYF010000000
VERSION     DAWEYF010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6246
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.117"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..131)
                     /locus_tag="WGN93_001564"
     CDS             complement(<1..131)
                     /locus_tag="WGN93_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ0227458.1"
                     /translation="MLKTLTFAALHFTTAFSVTYVLTGSIGVSGAVALVDPLINTVV"
     gene            254..1207
                     /locus_tag="WGN93_001565"
     CDS             254..1207
                     /locus_tag="WGN93_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ0227459.1"
                     /translation="MNHKKIVVLDADTLPGRAFHFDFPHELAVYGTTGADETAERVRD
                     AHIVITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAEAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIQDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHAPAVREGYVAFENAVRTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTNEPPKNGNPLLKARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1281..3338)
                     /gene="metG"
                     /locus_tag="WGN93_001566"
     CDS             complement(1281..3338)
                     /gene="metG"
                     /locus_tag="WGN93_001566"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ0227460.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGKLKDVSDSALLAKLTAQSEAIAECYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTATN
                     AARFLNLDAITWTNTRVTLGKHAINKYKHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EESKYEKAAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATAEGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(3454..5292)
                     /gene="glmS"
                     /locus_tag="WGN93_001567"
     CDS             complement(3454..5292)
                     /gene="glmS"
                     /locus_tag="WGN93_001567"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ0227461.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKSGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATKGVHVI
                     RAPRHVGKLSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            5574..6092
                     /locus_tag="WGN93_001568"
     CDS             5574..6092
                     /locus_tag="WGN93_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227462.1"
                     /translation="MKQMLLAVGVVEVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVFTGKEESMLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQHQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLF"
BASE COUNT         1329 a         1468 c         1908 g         1541 t
ORIGIN      
        1 aaaacgacgg tgttgattag ggggtcgacc agcgcgaccg cgccagatac gcctatactg
       61 cccgtcagca cataggttac actgaaggcg gtggtgaaat gcagtgcggc aaaagtcagg
      121 gttttaagca tcatcctctc ccgaattgaa aatttacgga gagatgataa agattatcat
      181 caggccgtgc cggtttaaat ttgctattta ctgttagtgt aaataaatca attttaaagt
      241 aaggatagaa atgatgaatc acaaaaagat agtcgttctg gatgcggata ctttgcccgg
      301 cagggctttt cacttcgatt ttccgcacga gcttgcggtt tacggtacga caggtgcgga
      361 tgaaacggcg gaacgggtgc gcgatgcaca tattgtcatt accaataagg taatgatttc
      421 cgccgacatt attgcggcta atccgcagtt ggagctgatt gccgtcagtg cgaccggtgt
      481 gaacaatgtc gatattgggg cggcggaggc ggcgggcgtt gcggtatgca atgtccgcgc
      541 ctacggaaac gaatcggttg cggaacatgc ctttatgctg atgattgccc tgatgcggaa
      601 tttgcctgcc tatcagcgtg atgttgcggc aggattatgg gaaaaatcgc cgtttttctg
      661 ccattacggc gcgccgattc aggatttgaa cggcaaaacg ctggcggttt tcggacgcgg
      721 caatatcgga cggacgctgg caggatacgc gcaggcgttc gggatggggg tggtgtttgc
      781 cgaacacaaa cacgcgcccg ctgtgcgcga aggctatgtt gcctttgaaa atgcggtacg
      841 gactgccgat gtgttgtcgc tgcactgtcc gctgaacgca caaactgaaa atatgatagg
      901 cgaaaatgag ttgcggcaga tgaagcccgg tgcggttttg attaattgcg ggcgcggcgg
      961 gctggtggat gaaaacgcgc tgcttgccgc actcaaatac gggcagatcg gcggggcggg
     1021 cgtggatgtt ttgacgaatg agccgcctaa aaacggcaat cctctgttga aggcacgact
     1081 tcccaatctg attgttacgc cgcataccgc gtgggcaagc cgcgaggctt tggacaggct
     1141 gtttgatata ttgttggcga acattcacgc ctttgtgaaa ggcgaggcgc aaaaccgggt
     1201 ggtttgagct tgtcgggatg acgaaaaaat gccgtctgaa cgcctcaagg gttcagacgg
     1261 cattgttttg acatttctgc ttaaccgact ttgtcgcccg gttgtgcgcc tgcatccaca
     1321 tccaagagct tcagtttgcc ctctgccgtg gcggcactca aaatcatacc ttcggatacg
     1381 ccgaattttg ccattttgcg cggggcgaag ttggcgacgg cgatgaccat tcttccgttt
     1441 aactcggcag ggttgggata agacgcggcg ataccggaga agatgatgcg tttttcaaaa
     1501 ccgaaatcga ggtcgaattt caaaagtttg gtgctgccct cgacggcttc gcagttcaag
     1561 actttggcga cgcgcatatc aattttcata aagtcgtcga agctggcctg ttcggcggct
     1621 ttttcgtatt tgctctcttc ggcggcaggt gcggctgcgg cggcgatgct ttgtttgttg
     1681 gcttcgatta aatcgtccac ttgtttttgc tccactcgtt gcattaaatg tttgtatttg
     1741 ttgatggcgt gtttgcccaa ggttaccctt gtgttcgtcc aagtaatcgc gtccagattg
     1801 aggaaacgcg cggcattggt ggcggtttgc ggcaatacgg gggcgaggta ggcggtcagc
     1861 atcgtaaagg cgttgatgag ttcgctgcat acttcgtgca ggcgttcgtc ttggccttct
     1921 tgtttggcga gttcccaagg tttgttggca tcaacgtatt cattaacaat gtctgccaat
     1981 gccatgatgt cgcgcagggc gcgggcgtat tcgcggtttt cgtagcattc ggcaatggct
     2041 tcgctttgcg cagtcagttt tgccagcaat gcgctgtcgg aaacgtcttt gagttttcct
     2101 tcaaagcgtt tggcgatgaa acctgacgcg cgggcggcga tgttgacgta tttgccgacg
     2161 aggtcgctgt tgacgcgcga gataaagtct tgcaggttca aatcgatgtc ttcgattttg
     2221 ctgttgagtt tggcggcgat gtagtagcgc atccactcgg ggtttaggcc ttgttccaga
     2281 taggatttgg cggtaataaa cgtgccgcgc gatttggaca ttttttgtcc gtccacggtc
     2341 aaaaagccgt gtgcgtacac gccggtcggg gcgcggtggc cggagaaatg cagcatggcg
     2401 ggccagaaca gggcgtggaa atagaggatg tctttgccga tgaagtggta catctcggtt
     2461 tggctgccgg ctttgaagta ttcgtcgaaa tcgatgccga tgcggtcgca caggttttta
     2521 aacgatgcca tgtagccgac gggcgcgtcc agccagacgt agaagtattt gcccggcgcg
     2581 tcggggattt caaaaccgaa atacggcgcg tcgcgggaaa tgtcccagtc ggacagggtg
     2641 gtttcttcgc cttcgcccag ccattctttc attttgttga gggcttctgg ttgcagatgg
     2701 ggtttgccgt cgtgcgggtt gttgccggaa gtccatgctt tgaggaagtc ggcgcattcg
     2761 cccagtttga agaagaagtg ttcggattcg cgcaattcgg gtttcgcgcc ggaaacggcg
     2821 gaatacgggt taatcagttc ggtcggggaa taggtcgtgc cgcagacttc gcagttgtcg
     2881 ccgtattggt cttgggcgtg gcatttcggg cattcgcctt taacgaagcg gtcgggcagg
     2941 aacatttgtt tttcggggtc gaaaagctgc tcgatgacgc ggctctcaat cttgccgttg
     3001 gctttcagcg cgcggtaaat atcttgggaa aactgtttgt tttcagggga atgggtgctg
     3061 taataattgt cgtagccgat gttgaaaccg gtaaagtcgg cgaggtgttc ttcgcgcact
     3121 ttggcaatca tgtcttcggg cgcgatgcct tgtttttgcg cggcaagcat cacgggcgtg
     3181 ccgtgggtgt cgtcggcgca gcagtagtag cattcgttgc cgcgcagttt ttggaagcgc
     3241 acccaaacgt cggtttggat gtgttcgacc atgtggccga ggtggatgct gccgttggca
     3301 tagggcaggg cggaggtaac taagattttg cgtgtcatat tgtgctttgc aaacaatggg
     3361 taaaggcgga ttataccgca aatcaaacgg ggaaatgccg tctgaagcct gaaaaatcgg
     3421 gcttcagacg gcatttttgc aaaacggcgg gagttattcg acggttacgg atttcgccag
     3481 gttgcgcggc ttgtccacat cggtaccgcg tgcgagggcg gtgtggtagg cgaggagctg
     3541 cacggggata gtatgcacga cgggggacag tttgccgacg tggcgcggtg cgcggataac
     3601 gtgcacacct ttggtggcat taaaattact gtcgaggtcg gcaaagacga aaagttcgcc
     3661 gccgcgcgcg ccgacttcct gcatattggc tttgactttg tccaacaggc tgtcgttggg
     3721 tgcgatgacg acgacgggca tgttttcgtc caccaaggca agcggcccgt gcttcagttc
     3781 gccggcagga taggcttcgg cgtggatgta ggtgatttcc ttcagtttta acgcgccttc
     3841 gagggcaatc gggtaatgga tgccgcgccc caaaaacagc gcgctggttt tcttggcaaa
     3901 ctgttgcgcc caggcggcaa tttgcggttc gaggtttaaa gcgtgctgca cgctgccggg
     3961 aagctggcgg agttcttcgg tgtaacgtgc ttcgtcttct tcggaaacca aaccgcgcac
     4021 tttcgccagc gttaccgcca aaccgaacag cgcaaccagc tgcgtggtaa atgctttggt
     4081 tgaggcgacg ccgatttccg caccggcacg ggtataaagc acgaggctgc tttcgcgcgg
     4141 cagggcggat tccatcacgt tgcagatgga gaggctgtgg cggtgtccca aggattttgc
     4201 gtatttcaac gcctccatcg tgtccagcgt ttcgccggat tgggaaatgg taatgaccag
     4261 ttggtccgga tcggcaatca cgctgcggta tcggtattcg ctggcgattt cgacatcggc
     4321 cgggattttg gcgatggatt ccaaccaata tttggcggtc agcgcggcgt aataggacgt
     4381 gccgcaggca aggattttga cgctgcggat gctttcaaac acgcttttgg cgtttttgcc
     4441 gaagttttcg gggatgaagc cgccgtcgag gaaaacctcc gccgtgtctg caatcgcgcg
     4501 cggctgctca tggatttcct tttgcataaa gtggctgtac ggtcccagtt ccaaagaggc
     4561 gagcgagagt tcggatacct tgactttgcg ttcggcaggc aggccgcttt tatcggtcag
     4621 ccgtttgatg ccgtctgaag ccagcagcgc gatgtcgccg tcttcgaggt acgccacgcg
     4681 gcgcgtaaag gcgatgacgg cggatacgtc cgaagcgata aaggtttcat cgtcgcccaa
     4741 agcgaccaaa agcgggcagc ccatacgcgc cacaactaat tcatcaggct tgtcttgggc
     4801 aataaccgcg atggcgtatg cgccgtggaa acgtttgacc gcttcttgta ccgcttcaaa
     4861 cagcctgccg ccgttttgcg cgtattcgtg attgatgctg tgtgcgatga cttcggtatc
     4921 cgtttgcgat tcaaaacggt atcccaaacc ttccaagcgt ttgcgttcgc tttcaaagtt
     4981 ttcgatgatg ccgttgtgga cgaccgcaat catcccgccg ctgatgtgcg ggtgggcgtt
     5041 cggctcggta acgccgccgt gtgtcgccca gcgcgtatgc ccgatgccga tgccgccgct
     5101 gatgcctttt tcgcgtgccg cgtcctccat aagctgcacg cgtccgacgc ggcgcacgcg
     5161 tttgattttg ccgtcggtgt tgacggcaat gcctgatgag tcataacccc ggtattcgag
     5221 gcgtttgaga ccgtcggtca gaaaatcgac gacgttgtga tgggcgcgga tggcgccgac
     5281 gataccgcac ataactgttc cttagtatcc ggttgaaaaa aaacaggcgc ggacggctcc
     5341 cgtgccgcac cttccgcttc ggattataaa ccgcctcccg cgccgaaaaa cagcaaaatg
     5401 ccgtctgaag gcttgggctt gctcaaaaaa gggagggatt tccccgcctg accgggatgg
     5461 gcgttcagac ggcattgcct gctgccggtt tatagttttt acaaatcaat attgacaagc
     5521 tgaaaaaaaa aaacaatata ctcgctcggt cttaatgtta acggagtatg gaaatgaaac
     5581 aaatgctttt ggccgtcggc gtggtggagg tgttggcggg ctgcggcaag gatgccggcg
     5641 gttacgaggg ttattggcgc gaaaaatcgg acaaaaaaga gggtatgatt gccgtcaaaa
     5701 aagaaaaagg caattacttc cttaataaaa tcaacgtgtt tacaggtaag gaagaatcta
     5761 tgcttttgtc tgaaaaagac ggcgcgcttt cgataaacac ggggataggg gaaatcccga
     5821 tcaaactttc cgatgacggg aaagagctgt atgtcgaacg caggcagtat gtcaaaaccg
     5881 atgcggcgat gaaggacaaa atcatcgccc atcagaaaaa gtgcggacaa acggcacagg
     5941 catatctcga cgcgcgaaat gcgttgccgt caaaccagac gtatcagcag catcaggcgg
     6001 cgatcgagca gttgaaacgg cggtttgaag ccgagtttga cgaattggaa aaagaaatca
     6061 aatgcaacgg caaaccgaca ttgttgtttt agcgtaggac aaccgggagg atgccgccgt
     6121 ccgaatcgga cgtgcggttt ctgtaccggt acgggcgggc aggaatgtcc gctttttttg
     6181 ttcggacgcg tttgaatacc cgtttgattc cgtccgtttg caaagggtat ttttgttcgg
     6241 gcggaa
//
LOCUS       DAWEYF010000118         6195 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.118, whole genome shotgun sequence.
ACCESSION   DAWEYF010000118 DAWEYF010000000
VERSION     DAWEYF010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6195
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.118"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(549..1133)
                     /gene="rnhB"
                     /locus_tag="WGN93_001569"
     CDS             complement(549..1133)
                     /gene="rnhB"
                     /locus_tag="WGN93_001569"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ0227463.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDTLAEMIKDQAAAWHVAAATPEEIASLNILHATMLAMKRAVDGLVVHPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(1201..3096)
                     /gene="mnmG"
                     /locus_tag="WGN93_001570"
     CDS             complement(1201..3096)
                     /gene="mnmG"
                     /locus_tag="WGN93_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ0227464.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTYEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3421..4848)
                     /locus_tag="WGN93_001571"
     CDS             complement(3421..4848)
                     /locus_tag="WGN93_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ0227465.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            5008..5997
                     /gene="pdxA"
                     /locus_tag="WGN93_001572"
     CDS             5008..5997
                     /gene="pdxA"
                     /locus_tag="WGN93_001572"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ0227466.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAAEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFCIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRRERINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1309 a         1614 c         1798 g         1474 t
ORIGIN      
        1 gtcattcccg caaaaacaaa aaaatcaaaa acacaaaact gaaatatcgt cattcccgcg
       61 caggcgggaa tctaggtctg tcggtacgga aacttatcgg gaaaaacggt ttttccaacc
      121 ctgagactcc ggattcctgt tttcgcagga atccggtttt ttgagtttca gtcattttga
      181 taaattcttg cagctttggg tttctagatt cccgcttttg cgggaatggc ggtttggaag
      241 ttacctgaaa ttcaaaaaaa cggaaaccgg acggactgga ttcccgtttt cacgggaatg
      301 acggatttta ggtttctttt ttgattttct gtttttcgcg ggaatggcgg tttggaagtt
      361 acctgaaatt caaaaaaaaa aaaacggaaa ccggacggat tggattcccg cctgcgcggg
      421 aatgacggat tttaggtttt tttttgattt tctatttttc gcgggaatga cggtttgggt
      481 tctttctctt tggagttgcg atgccggaaa tgccgtctga aggcttcaga cggcattttt
      541 gtgccggttt aaaacaaggc ctgctgcgcg agcaggtttc tgacgggggc gaagtcgcgg
      601 cggtgttcgg gcagcacgcc gtattgtttg agggcttcca gatgctgctt cgtgccataa
      661 cctttgtgtt tgtcgaaacc gtattgggga tggcgttgcg ccagtgcgta catttctgca
      721 tcgcgtgcgg tctttgccaa aacggatgcg gcggagattt cgatgatttt gctgtcgcct
      781 ttgacgacgg cttcggcagg gatacctaaa tgttctggaa tgcggttgcc gtcgatgaat
      841 attttttcgg ggtgcacaac caaaccgtca acggcgcgtt tcatggcaag catggtggcg
      901 tgcaggatgt tgaggctggc gatttcttcg ggcgtggcgg cggcgacgtg ccacgcggcc
      961 gcctgatctt taatcatttc ggcaagcgtg tcgcgttttt tctcgctgag ttttttggag
     1021 tcggtcagtc cgggtaggtc aaacgtttcc ggaaggatga cggcggcggc aaacacgctg
     1081 ccgactaaag gtccgcgtcc ggcctcgtcc acgccggcgg tcagtatgtg catgatgttt
     1141 cctgtcggga tggtacgatg ccgtctgaaa agggtttcag acggcatcgt accgatgtgt
     1201 ttatttcgcg tctttaaacc cgcgcttcaa atgcaccatc agcagtgcga cggcggcagg
     1261 cgttacgccg gaaatgcggc ttgcctgccc gacggtttcg ggtttgtgct ggttgagctt
     1321 ttgctgcact tctgccgaca agcctttgac tttgccgtaa tcgatgccgt cgggcagttt
     1381 taaggtttcg atgtcgcggc ggctgtcgat ttcttcgttt tggcggtcga tatagccttg
     1441 gtatttgact tggatttcga cttgttcgat gacttcggcg gagaggtttt cagacggcat
     1501 cgcgccttcg agcgtcatca gcgcggcgta gtcgaggttc gggcggcgta acaaatcgtg
     1561 caggttggct tctcggctga gtttttgtcc gaatacgcgg atttgttcgt cttcggcgag
     1621 tttttgcggt gtgtaccacg ttgttttcaa acgttggatt tcgcgttcga cggcttcgcg
     1681 tttttcgttg aacatacgcc attgcgcttc acccaccaag ccgattttgt agccgtcttc
     1741 ggtcaggcgc atgtcggcgt tgtcttccct gagttgcagg cggtattcgg cgcggctggt
     1801 gaacattcgg tagggttcgt tcacgccttt ggtgatgagg tcgtccacca atacgccgag
     1861 gtaggcttgt tcgcggcgca gcaggagcgg gtcttgtccg cgcacatatt gcacggcgtt
     1921 cgcgcctgcc aataaacctt gcgcggcggc ttcttcgtag ccggtcgtac cgttgatttg
     1981 cccagcgaaa aacagtccct caatggtttt ggtttcgagg ctggctttga ggttgcgcgg
     2041 gtcgaagtag tcgtattcga tggcgtagcc ggggcgcagg atatgggcgt tttccaaacc
     2101 tttcatactg cggacgagcg cgatttggat gtcgaacggc aggctggtgg agataccgtt
     2161 aggatagtat tcgtacgtag tcaggccttc gggttctagg aaaatctggt ggctgtcttt
     2221 atcggcgaaa cggttgattt tgtcttcgat agacggacaa taacgcgggc ccacgccttc
     2281 gattttgccg gtaaacatcg ggctgcggtc gaagcctgag cggatgatgt cgtgggtttg
     2341 cgtgttggta tgcgtaatcc agcaggacac ttggcgcggg tgcatttcgg cgttgccgcg
     2401 cacggacatg acgggaacgg gtgtgtcgcc gggctgttcg gtcagttggg aaaagtcaat
     2461 cgtgcgtccg tcgatgcgcg gcggcgtgcc ggttttcaga cggccttgcg gcagcttcaa
     2521 ttcgcgcaaa cgtccgccca gcgatttggc ggcggggtcg ccggcgcgtc cgccctcgta
     2581 gttttccaaa ccgatgtgga ttttgccgga caaaaacgtg cctgcggtca acaccacggc
     2641 gcgtgcttta aactccacgc ccatcgcggt gattacgcct gaaatgcggt cgccatcgag
     2701 cgttacgtct tcgacggctt gttggaaaag gtcgaggttt tcttggtttt ccaacatttc
     2761 gcggatggcg gctttatata ggatacgatc cgcctgcgcg cgcgtggccc gtactgccgc
     2821 gcctttgctg gcgttcagac ggcggaactg gatgccggat ttgtcggttg ccaacgccat
     2881 cgcgccgccg agcgcgtcga gttcgcgcac caaatgccct ttgccgatgc cgccgatgga
     2941 agggttgcac gacatttgtc cgagcgtttc aatattgtgt gtgagcaaaa gcgtctgcgc
     3001 gcccatacgg gcggcggcga gcgcggcttc tgtgccggcg tgtccgccgc cgacgacgat
     3061 aacgtcgtag gttttggggt aaatcatgtg ggtcatgtgt gtattgcctg tcggtgtttc
     3121 agacggcatt tatagtggat taacaaaaac cagtacagcg ttgcctcgcc ttagctcaaa
     3181 gagaacgatt ctctaaggtg ctgaagtacc aagtgaatcg gtttcgtact gcttgtactg
     3241 tctgcggctt cgtcgccttg tcctgatttt tgttaaacca ctatattcaa tatgccgtct
     3301 gaaaaacgaa atggattcaa aagtaaaggg ttgggattgt acgcttgttc gccctgtttt
     3361 tacagtgtgc ggaaagggaa aagccgcttc gcggggaagc ggctccggta agggcgggat
     3421 ttaccaaacg tcggatttga tacggcgttt caggcccgga tgttcggaaa gtttgaactc
     3481 ggggtctttg cccattttca gcttggcggt gtaatcgcgc agcagcataa acgccaaggg
     3541 cgagagcagc aggatggcga caaggttgat ccacgccata atgcccatcg ccatatccgc
     3601 catatcccag accaaaggca cattggcaac cgcgccgaaa tagacccacg ccaaaaccag
     3661 catacggaaa acggcggtaa tcagccaatg gcttttgatg aattggacgt tggactcggc
     3721 ataggcatag ttgccgataa cggtggaaaa ggcaaacata aacaggatga cggcgaggaa
     3781 gcccgcgccc cattgcccca cttggctgac aatcgccgcc tgcgtcaacg ccgcaccgct
     3841 caaatcgccg taaggctgtt ggtaaatcaa gatgatgaag gcggtgcaag aacaaacgat
     3901 gatggtatcg acaaacacgc ccagcatttg aatcatacct tgcgaaacag ggtgtttcac
     3961 ttcggcggcg gcggcggcgt tcggcgcgga acccataccc gcctcgttgg aatacaggcc
     4021 gcgtttgatg cccatcatca tcgtttgcga aatcagaccg ccgagtaagc cgcctgctgc
     4081 cgcgtcgaat ttgaacgcgc ccgaaaaaat ctgaccgaac acgtccggaa tcatcggaat
     4141 attggtcaaa atgatgaaaa gcgcgataaa gaggtacaaa accgccatca gggggacgac
     4201 gatttccgcc gctttagata tgcgcctgat gccgccgaag ataatcggcg cggttaaaat
     4261 caccagggcg acgccgacat aatgaggctc ccaaccccac gccgctttga cggtatcggc
     4321 aatggtattg gtctgaaccg cttcaaacac aaagccgaaa cagaaaatca ggctcagggc
     4381 gaacaacacg cccagccatt tctgccccag cccttgagtg atgtagtagg cagggccgcc
     4441 ccggaaatgg tggttgtcgt agtcgcggac tttaaagagc tgcgccagcg aagattcgac
     4501 aaacgccgaa ctcataccga ttaaggcggt tacccacatc caaaacaccg cgcccggtcc
     4561 gccgactttg atggcgatgg ccacgcccgc gatattgccc acgcccacgc ggctggcaag
     4621 gccggttaca aatgcctgaa acggcgtgat gccgtgaggg tcgtccccct gtttgcggcc
     4681 gccgagcatt tctttgatgc tgcgcccgaa caggcggaat tggacaaagc ccgtggttac
     4741 ggtgaagaaa agccccgtac ccaaaagcat ataaaccaag tatgaccaca tcggatcgtt
     4801 gatggcgccg acccagccgt gcagccattc ggtaaagttc tcgttcatat cgcttcctta
     4861 aagttgaaac tcgcacatat tggcggtatg caagcagggt ttaaattttg taaacgccca
     4921 ttctagcaga ttgtcaacaa aatcagaaaa atttacatcg ccgcgcggct gcggcgttag
     4981 aatcgcattt tgtttggagc aaacacgatg aaacagcctg tttttgccgt tacttccggc
     5041 gagcctgccg gcatcggccc cgatatttgt ttggacttgg cgtttgcacg cctgccctgc
     5101 cgctgcgcgg tattgggcga caaaaaccta ttgcgcgcgc gcgccgaagc cttgggcaaa
     5161 agcgtcgtct tgcgcgactt cgatccggaa tcaggcggcg cggcatacgg cgagctggaa
     5221 gtgctgcaca tccctgccgc cgaagcggtt gaggcagggc ggctcaatcc cgccaacgcc
     5281 gcctatgtgc tgcaactttt ggacaccgcg ctcgcaggca tttcagacgg cattttcgac
     5341 ggcatcgtta ccgcgccgct gcacaaaggc atcatcaacg acgcgcgcgc aagcacaggt
     5401 tttttcagcg gacacaccga atatctggcg gaaaaaagcg gcacggggca ggtcgtgatg
     5461 atgcttgccg gcaaaggcct gcgcgtcgcc ctcgtaacga cccacctgcc gctgaaagac
     5521 gttgccgccg ccatcacgca accgctgatt gaaagcgtcg cacgcatttt gcatcacgac
     5581 ttaaaacaca aattctgcat caaaaatccc aaaatcctgg tcgccggact caacccccac
     5641 gccggtgagg gcggacacct cggacacgaa gaaaccgaca ccattatccc cgcgctcgaa
     5701 aacctgcgcc gcgaaaggat aaacctcgcc ggcccgtatc cggcggacac attgttccaa
     5761 ccgtttatgc tcgaaggtgc ggatgccgta ttggcgatgt accacgacca agggctgccc
     5821 gtgttgaaat accacagttt cgggcagggc gtgaacatca cactggggct gccctttatc
     5881 cgcacctccg tcgatcacgg caccgcgctc gatttggcgg caaccggcag ggcggattcc
     5941 ggcagcctga taactgccgt ggagaccgcc gtcgagatgg cgcgcggcag cctttaaaga
     6001 tgataaaaga cccgtcattt ccgcgcaggc gggaatccgg tctgttcggt ttcagttgtt
     6061 tttgggtttc gggtaatttc caaatcgtca ttcccgcgca ggcgggaatc cagaccttcg
     6121 ggcgacggca atattcaaag attatctgaa agtttgaggt tctagattcc cgttttcacg
     6181 ggaatgacga aaggt
//
LOCUS       DAWEYF010000119         6137 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.119, whole genome shotgun sequence.
ACCESSION   DAWEYF010000119 DAWEYF010000000
VERSION     DAWEYF010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6137
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.119"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            205..1638
                     /gene="lpdA"
                     /locus_tag="WGN93_001573"
     CDS             205..1638
                     /gene="lpdA"
                     /locus_tag="WGN93_001573"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ0227467.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            1733..2020
                     /locus_tag="WGN93_001574"
     CDS             1733..2020
                     /locus_tag="WGN93_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227468.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            2119..3285
                     /gene="sucC"
                     /locus_tag="WGN93_001575"
     CDS             2119..3285
                     /gene="sucC"
                     /locus_tag="WGN93_001575"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ0227469.1"
                     /translation="MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            3296..4186
                     /gene="sucD"
                     /locus_tag="WGN93_001576"
     CDS             3296..4186
                     /gene="sucD"
                     /locus_tag="WGN93_001576"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ0227470.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(4737..>6137)
                     /locus_tag="WGN93_001577"
     CDS             complement(4737..>6137)
                     /locus_tag="WGN93_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="funZ protein"
                     /protein_id="HEZ0227471.1"
                     /translation="FYKNIHATTKFVRETDYSKFIQLKKARHLTVSDFTSIWKVILYL
                     LISNQIKCKENGILSSIFNKFKALDEAINEYYYGAFDPEIVQAITLIENSKEAAEMIF
                     GKFVKLGEEESQQITFTESKFQANLGFIERKFKDALSQLKLKDNHILFIDGIDIRPSQ
                     IPFDEYHECVKGLANAIWMLNNDIFPSIKDSKGRMRVVLLIRPDIFDSLGLQNQNTKL
                     QDNSVFLDWRTDYKSYRSSKIFGVFDHLLRTQQEKQDSLEKGNSWDYYFPWNAPNLHD
                     EYKNLTSFISFLRKSYYRPRDILQMLTLLQKNKKSKEDYVVAEDFDNTSFQREYSIYL
                     LGEIKDHLLFYYSQSDYQNFLKFFEFLNGKDRFKYSDFLKAFERLKKHLQTTSVEIPK
                     FMSTANEFLQFLFDLNVIAYLDNPEDETKPYIHWCFKDRNYANISPKIKTETEYLIFS
                     ELSKALDVGTPFKNKQ"
BASE COUNT         1753 a         1368 c         1406 g         1610 t
ORIGIN      
        1 gatgtagcgt aatgtagtat cgtgctacaa taggctcaac aaacgattga gaccgtctga
       61 aacatttgat tcgaatgaat cggcagatat ggactttcag acggcttttt cttaaaacca
      121 tcaaaacgca gtcattcaaa ataaaaaaga aacgaaaagt atcgttttta ttttgagata
      181 ctgctaaaag caaaggatga cacgatgtct caatatgatg tagtagtgat tggtgcaggc
      241 ccgggcggat acgttgccgc catccgtgcc gcacaactgg gtttcaaaac tgcctgtgtc
      301 gatgcaggcg ttaacaaagc aggcaatgcc cctgcattgg gcggtacttg cttgaacgta
      361 ggttgtatcc cttctaaagc cctgttgcaa tccagcgaac atttccacgc agcgcaacac
      421 gagtttgccg aacacggtat cactgtcggc gacgtaaaat tcgacgcggc caaaatgatt
      481 gagcgcaaag atgccatcgt gaccaaactg accggcggcg tgaaattcct gttccaaaaa
      541 aataaagtaa ccagtctgtt cggtacggct tcctttgccg gtaaaaatgg cgatgcttac
      601 caaatcgaag tcgataacaa aggagagaaa accgttatcg aagccaaaca cgtcatcgta
      661 gcgaccggtt ccgtaccgcg tccgctgcca caagtcgcta tcgacaatgt gaacgtattg
      721 gacaacgaag gcgcattgaa cctgaccgaa gtacctgcca aactcggcgt gatcggttcc
      781 ggtgtgattg gtttggaaat gggttccgta tggaaccgcg tgggtgcgga agttaccatt
      841 cttgaagccg cgccgacctt cctggctgcc gccgaccaac aaatcgccaa agaagccttc
      901 aaatacttca ccaaagagca aggtctgagc atcgaattgg gcgtgaaaat cggcgacatc
      961 aagtctgaag gcaaaggtgt ttccgttgct tacgaaactg ctgccggcga agccaaaacc
     1021 gaagtattcg acaaactgat cgttgccatc ggccgtattc caaacaccaa aggcctgaac
     1081 gcggaagccg taggcttgga aaaagacgag cgcggcttta tcaaagtaga tggcgaatgc
     1141 cgtaccaacc tgcctaacgt atgggcaatc ggcgacgtgg ttcgcggccc gatgttggca
     1201 cacaaagcca gcgacgaagg cgttgccgtt gccgaacgca ttgccggtca aaaaccgcat
     1261 atcgacttca acaacgtacc gttcgtgatt tacaccgatc ctgaaatcgc ttgggtgggt
     1321 aaaaccgaag agcagctcaa agccgaaggc gtggagtaca aaaaaggtac ttcaggtttt
     1381 ggtgcgaatg gtcgcgcatt ggcaatgggc aaagccaaag gtacggttaa agtgttggca
     1441 gacgccaaaa ccgaccgcat cttgggcgta cacatgattg gtccggttgt cagcgaattg
     1501 gttaccgaag gcgtgactgc gctcgaattc ttcgccagca gcgaagacat cgcccgcatt
     1561 atccatgccc acccaacctt gtccgaagtg gttcacgaag ctgcattggc ggccgacaaa
     1621 cgcgctttgc acggttgata gacattaagg ccttcgacaa attgaatgtt ccgagagctc
     1681 cgttttctga tttataattc cgtcagacaa acaaacagca tttacattcg ttatgaacaa
     1741 agaaatagtc ggtattttct ttataccgat gggcatcatc agcatgtgta tggccgcatt
     1801 gtggcagatg tatgtgatga tgaccgaaac ttatacgctc aaccgtttca aagataaaga
     1861 attggtttgg cgcgtggcat tgttgtttat cagtttcagc cttgccgttt atctgctctg
     1921 tccgaattcg cgtaaaaaag gcatcgtctt ttttattctc gggggaggcg gtgcagccat
     1981 gtatctgctg gcgcggatgt ggttgccttt cagcaagtga aacgacgatt ttccgaccgc
     2041 cgaaaggtag tctgaaacgc acgggcttgc catttggagg caaactcggg gcattccact
     2101 aatctaaagg agaaatccat gaatttacac gagtatcagg ctaaagaact gctggctggc
     2161 tacggtttgc ccgtacaagg cggtattttg gcacacaacg gcgaagaagc cgctgcagct
     2221 tacgacaaat tgggcggcaa attcgctgtt gtcaaagcac aagtacacgc cggcggccgc
     2281 ggtaaagcgg gcggcgtaaa agtcgttaaa agccgcgaag aagctaaaga agtggctgaa
     2341 agcctgattg gcaccaactt ggtaacttac caaaccgatg ccaacggcca acctgtcaac
     2401 agcgttttgg tttgcgaaga tatgtatccg gttcaaaccg agctgtactt gggcgcagtg
     2461 gttgaccgtt ctacccgccg cgttacattc atggcttcta ccgaaggcgg cgtggaaatc
     2521 gaaaaagttg ctgccgaaac tccagaaaaa atcttcaaag taaccgttga tccgctggtc
     2581 ggcctgcaac cttgccaagc tcgcgaagtt gccttccaac tgggcttgaa agacaaacaa
     2641 atcaacgagt tcgtcaaact gatgaccggc gcgtacaaag cgtttgtcga aaacgacttc
     2701 gccctgtttg aagtcaaccc gctggcagtt cgcgaaaacg gcgcactggc ttgcgtggac
     2761 ggcaaaatcg gcatcgacag caacgcgctc taccgcctgc caaaaatcgc tgaattgcgc
     2821 gacaaatctc aagaaaacga acgtgaactg aaagcttctg aattcgacct gaactatgtt
     2881 gccctggaag gcaacatcgg ctgtatggtt aacggtgccg gtttggcgat ggccaccatg
     2941 gacatcatca aactcaaagg cggtcaacct gccaacttct tggacgttgg cggcggcgca
     3001 accaaagacc gcgtggttga agcgttcaaa ctgattttgg aagacaaatc cgttaaaggc
     3061 gtattgatca acatcttcgg cggtatcgta cgttgcgaca tgattgcgga agccatcgtg
     3121 gcagccgtta aagaaatcaa cgtcgacgtt cctgtcgttg ttcgtttgga aggtaacaac
     3181 gccgaactcg gcgcgaaaat cctgaacgaa tcaggcctga aactgacttc tgcagacggc
     3241 ctgaatgacg cagccgaaaa aattgttgca gccgtaaacg cctaaggaga aaagaatgag
     3301 cgtattgatt aataaagaca ccaaagtatt ggttcaaggt ttcaccggta aaaacggtac
     3361 tttccactcc gaacaagctc tggcttacgg cactaaagtt gtcggcggcg ttaccccggg
     3421 caaaggcggt caaacccacc tgaacctgcc tgtattcaac accatgaaag aagctgttaa
     3481 agaaaccggc gcggatgcat ccgtaattta cgttcccgct ccgtttgtgt tggattctat
     3541 cgttgaagcc gttgattcag gcgtaggctt ggtcgttgtg attaccgaag gcgtacctac
     3601 tttggacatg ctcaaagcca aacgttactt ggaaaccaac ggcaacggta cccgcttggt
     3661 cggccctaac tgcccgggcg tgattactcc gggcgagtgc aaaatcggca ttatgccggg
     3721 ccacatccac actccgggcc gcatcggtat tatttcccgt tccggtacat tgacttacga
     3781 agccgtggca caaaccacca aactgggctt gggtcaatca acctgtatcg gtatcggcgg
     3841 cgacccgatt cctggtatga accaaatcga cgcactgaaa ctcttccaag aagacccaga
     3901 taccgacgcc atcatcatga ttggtgaaat cggcggtact gcggaagaag aagcagccga
     3961 atacatccaa tccaacgtaa ccaaacctgt tgtaggttac attgctggtg ttaccgctcc
     4021 taaaggcaaa cgtatgggcc acgccggtgc gattatttcc ggcggtaaag gtactgccga
     4081 agaaaaattc gccgctttcg aaaaagccgg tatcgcctat actcgcagcc ctgccgagtt
     4141 gggcacgacg atgctggaag tgttgaaggc aaaaggtttg gcataatcag gtttgacaac
     4201 tgattaaaca tcaaatgccg tctgaaaccg gaaatcgggt ttcagacggc attttgtttg
     4261 tcatttcaaa aagaggcagc ctcaacatac ccacattatt ttttcccttt tggggcagtc
     4321 agagaccttt gcaaaattcc ccaaaatccc ctaaattccc accaagacat ttaggggatt
     4381 ttggggaatt ttgcaaaggt ctcgggctaa gtgtgcctgt ttgcgcctaa aaggcggccc
     4441 ggatgcctga ttatcgggta tcctgggagg attaaggggg tattggggta aaattagtgg
     4501 atatttgaaa cgaaaacagc cgaaaacctg tgtttgggtt tcggctgtcg ggagggaaag
     4561 gaattttgca aagctctcgt attggctttg aagttccgtg taattcacag gtagggcgtg
     4621 tggcacagcc acgcacgcgg tcggttgggt atgcaggcta cggctttctc tgttgaaact
     4681 gcaacacgtc agctaccaac cgtgtgcgta gcgcacacgg ttggttggga tacaagttac
     4741 tgtttgttct taaatggagt accaacatca agggcttttg ataattctga aaatattaaa
     4801 tattcagttt cagtttttat tttaggagaa atatttgcat aatttctatc tttaaagcac
     4861 caatggatat atggtttcgt ttcatcttct gggttatcta aataagcaat aacattcaag
     4921 tcaaataaaa attgcaaaaa ctcattagca gtactcataa atttaggtat ttccactgat
     4981 gttgtttgta agtgcttttt caaacgttca aatgctttta aaaaatcact atatttaaat
     5041 ctatctttcc cgtttaaaaa ttcaaaaaat ttcaggaaat tttgataatc actttgacta
     5101 taataaaaca aaagatgatc tttgatttca ccaagtaaat atatcgagta ttctctttga
     5161 aaagaagtat tatcaaaatc ttctgctacg acataatctt ccttactttt cttatttttt
     5221 tgtagcaaag taagcatctg aagaatatcg cgaggtcgat aatacgattt tcttaggaag
     5281 ctaataaatg aagttaaatt tttatactca tcatgtaaat taggagcatt ccatggaaaa
     5341 taataatccc atgagttgcc tttttctaaa ctatcttgtt tttcttgctg ggttctcaaa
     5401 agatgatcaa aaacgccaaa aatctttgaa cttctataag atttataatc cgtcctccag
     5461 tctaaaaata ctgaattatc ttgaagtttg gtattttgat tttgtaaacc taatgaatca
     5521 aagatatcag gtctaatcaa taacacaact ctcatccttc ccttactatc tttaatggaa
     5581 gggaagatat cattatttaa catccatatg gcgttagcaa gaccttttac acactcatga
     5641 tattcatcaa atggaatctg tgatggtcta atatctatcc catcaataaa caaaatatga
     5701 ttatctttta gctttaactg agataaagca tctttaaatt ttctttcaat aaaacctaaa
     5761 tttgcttgga atttactttc tgtaaaagtt atttgttggg attcctcttc acctagttta
     5821 acaaattttc caaaaatcat ttccgcagct tcttttgaat tttctattaa agttattgct
     5881 tgtacaattt ccggatcaaa agcgccataa taatattcat ttatagcctc atctaaggct
     5941 ttaaatttat taaatattga agataatatt ccgttttctt tacatttgat ttgatttgat
     6001 atcaacagat ataaaatgac tttccaaata cttgtaaaat ctgaaacagt taagtgtctt
     6061 gctttcttta gctgaataaa ttttgaataa tcggtttcac gaacaaactt agtagtggca
     6121 tgtatgtttt tatagaa
//
LOCUS       DAWEYF010000120         6100 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.120, whole genome shotgun sequence.
ACCESSION   DAWEYF010000120 DAWEYF010000000
VERSION     DAWEYF010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6100
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.120"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(268..642)
                     /locus_tag="WGN93_001578"
                     /pseudo
     CDS             complement(268..642)
                     /locus_tag="WGN93_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(948..2207)
                     /gene="rho"
                     /locus_tag="WGN93_001579"
     CDS             complement(948..2207)
                     /gene="rho"
                     /locus_tag="WGN93_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ0227472.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTSNYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            complement(2427..4811)
                     /gene="ppsA"
                     /locus_tag="WGN93_001580"
     CDS             complement(2427..4811)
                     /gene="ppsA"
                     /locus_tag="WGN93_001580"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ0227473.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFSINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            5222..6043
                     /locus_tag="WGN93_001581"
     CDS             5222..6043
                     /locus_tag="WGN93_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ0227474.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
BASE COUNT         1322 a         1418 c         1733 g         1627 t
ORIGIN      
        1 gggcagtcct tccaacaacg gcgacaggtg tttgcactca tgggcattgg cggaggtata
       61 gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa cagtacggaa
      121 cccattcact tggtgcttca gcaccttaga gaatcgttct ctttgagcta aggcgaggca
      181 ccgccgtact ggtttttgtt aatccactat aaaaatttat ggggctgtcc tagataacta
      241 ggataaactc gattttacta attgttttca aatggaaatt tgaactttta tctcactgtt
      301 gttaaaacgt cgttcgtacc cctttaaata cagctcaaaa tgcgctttgg gaatgccgtc
      361 aaacttgcgt aaatgacgtt ttgcccggtt tcaaaagttc ccaattccat tgatatggtt
      421 ttgtcgttca gcaaaataac tttcatctgc ttctactttg ccgtcaaaca tttccaaatg
      481 cggactgttt tgataaataa gtaatcgtaa acgatgaaaa taataggctg cggtattttt
      541 attaacgcct actaactctg ctgctgttct tgcagttaca cctgcgacaa acagttcaat
      601 gagtttattt tgtttatact ggcttagacg actttttctc ataggggcaa ctctaactta
      661 atttgaattt ccctagttat ctaggacagc cccaaattta tacaaaaatg agcgcggttc
      721 ggcgcaacct tgaatcaagt tcccgcatcg gttttcattg ccggtacgga tgcgttcaag
      781 ccggtttttc aaaggccgcg ctttcggcaa gcggacacgg acactgccga cggttgcgcc
      841 gttaacgggg ggagggagga gctgcgccga ccgtgtgaat gaaagtgccg tctgaaaccc
      901 gattttcagg cttcagacgg catttcgcat taatgcgggc ggcgcgttta tttgccgcgc
      961 atcagttcaa agaaatcgtc gttgttttta gaggctttga ttttcccgtt taagaactcg
     1021 gtagcttcga tttcatccat cgggtgcagg aacttgcgta agagccacat acgttgcaac
     1081 tggtcgttcg gcacaagcag ctcttcgcgg cgcgtgccgg atttgttgat gttgatggcg
     1141 gggaagaggc gtttttccgc catacggcga tcaaggtgca attccatatt gccggtgcct
     1201 ttgaattctt cgtaaatcac atcgtccata cggctgccgg tttcaaccaa tgcggtggcg
     1261 ataatggtca gcgaaccgcc ttcttccacg ttgcgcgccg caccgaagaa acgtttgggg
     1321 cggtgcagcg cgttggcatc gacaccgccg gttaggattt tgcccgaggt aggcacgacg
     1381 gtattgtagg cgcgggcaag gcgggtaatc gaatccagca ggatgaccac gtcttttttg
     1441 tgttctacca tacgcttggc tttttcaagc accatttcgg caacttggac gtggcgttgc
     1501 gccggttcgt caaaggtgga ggaaaccact tcgccgcgga cggaacggct catttcggtt
     1561 acttcttcgg gacgctcgtc aatcaagagg acgatgagtt cgacttcggg atagtttgag
     1621 gtaacggcgt gggcaatgtt ttgcagcatc acggttttac cgcttttggg cggggcaacc
     1681 aagagggcgc gctgaccttt gccgataggg gaaatcaggt cgatggcacg tccggtcagg
     1741 ttttcttcgg actttaagtc gcgttccagc ttcaactgtt cggtcggaaa cagcggggtc
     1801 aggttttcaa acaggatttt atggcggcat acttccgggt ggtcgccgtt gatggtatca
     1861 agcctgacca gggcaaaata gcgttcgttg tcttttggga cgcgcacgct tccttcgatg
     1921 gtgtcgcccg tatgcaggtt gaagcggcgg atttgggtgg gcgagacata gatgtcgtcg
     1981 gggccggcaa gataggacgt gtccgcgctg cggaggaagc cgaagccgtc gggcaggatt
     2041 tcaagcgtgc cggagcaggt gaaaccctcg ccttttttca tcatctggcg gacgatggca
     2101 aatacgaggt cttgtttgcg gaatcggttg gcgttttcga tgccgtgttc ttccgccaat
     2161 tctaagagtt tggaaatgtg cagggtttgt aattcggaga cgtgcataat aatgatgtat
     2221 tttgaagagg aaaaagacag gcagatgccg tctgaaagaa gaagctgacc gttgccggtt
     2281 gctcggggaa aggggaattg taggcagtcg gcgcgtgggt gtcaaatatt atcgcggacg
     2341 gggcatcggc aggaaatgcc gtctgagcgg agctgcttgg aaaaaaatac ccccgcgctt
     2401 ttcaggctcg ggggtatggg cattgattat ttgttcaatt cattcgccaa atacagccaa
     2461 gtttcgatga cggtatccgg gttcagggaa acgctttcaa tgccttcctc aaccagccat
     2521 ttggcgaagt ccggatggtc ggacgggcct tgaccgcaga tgccgacata tttgttctgc
     2581 ttgcggcagg cggagatggc aaggtgcagc atcactttga cggcagggtt gcgttcgtca
     2641 aacgattcgg ataccaagcc gctgtcgcgg tcgagaccga gggtcagttg ggtcatgtcg
     2701 ttcgagccga tggagaagcc gtcgaagtat tgcaggaatt gttccgccaa taccgcgttg
     2761 ctcggcagct cgcacatcat aatcaggcgc aggccgtttt tgccgcgttc caagccgttt
     2821 tctttcaggg ctttgacaac ggcttcggct tcgcccaagg tgcggacgaa cggaatcatg
     2881 atttcaacgt tggtcaaccc catttcatcg cggacgcgtt tcaaggcttt gcattccaag
     2941 gcgaaacagt ctttgaagtt gtcggcgaca taacgcgccg cgccccggaa gcccaacatc
     3001 gggttttctt catgcggttc gtatacgttg ccgccgacta ggttggcgta ttcgttggat
     3061 ttgaagtcgg acatacggac gatggtttta cgcggataaa ccgatgcggc caatgtcgcc
     3121 acgccttcgg cgattttatc gacgtagaag tcgacagggg acgcgtaacc ggcgatgcgg
     3181 cgggtaattt ccgcttttaa ttcgtcgtct tgtttgtcaa attccaacaa ggctttcggg
     3241 tggataccga tttggcggtt gatgataaat tccatacgcg ccaagccgat gccttcgctg
     3301 ggcaggttgg cgaagctgaa tgcgagttcg gggttgccga cgttcatcat gactttgacg
     3361 ggtgctttgg gcatattgtc caaggcgaca tcggtaatct gtacgtccaa caggccggca
     3421 tagatgaagc cggtatcgcc ttcggcacag gatacggtaa cttcttgacc gtttttcagc
     3481 aattcggttg cattgccgca gccgacaacg gcaggaatgc ccagttcgcg cgcgatgatg
     3541 gcggcgtggc aggtacggcc gccgcggttg gtcacgatgg cggaagcacg tttcatcacc
     3601 ggttcccaat ctgggtcggt catgtcggta acgagtacgt cgccggcttc gacggaatcc
     3661 atctcggaag catctttaat caggcgcacc ttgccctgac cgactttctg accgatggcg
     3721 cggccttcgc acaagacggt tttttcgccg ttgatagaaa agcggcgcag gttgcggctg
     3781 ccttcttctt gggatttcac ggtttcggga cgggcttgca ggatgtagag tttgccgtcc
     3841 aagccgtcgc gtccccattc gatatccatc gggcggccgt agtgtttttc gatggtcagt
     3901 gcgtaatgcg ccaactcagt aatttcttcg tcggtaatgg agaagcggtt gcggtcttcc
     3961 tcggggacat cgacgttggt tacggattta ccggcttctg ctttgtcggt aaaaatcatt
     4021 ttgatgtgtt ttgaacccat ggttttacgc aggatggcgg gcttgcccgc tttgagcgtg
     4081 ggtttgaaca cataaaattc gtccgggttg accgcacctt gtacgacgtt ttcgcccaga
     4141 ccgtaagagg aggtaacaaa gacgacttga tcgtagccgg attcggtgtc gagggtgaac
     4201 atcacacctg atgcgccgct gtcggaacgc accatgcgtt gaacgccggc ggaaagggcg
     4261 acgatgtcgt gttcgaagcc tttgtggacg cggtaggaaa tggcgcggtc gttgtacagg
     4321 gaggcgaata catggtgcat cgcttcttta acgttttcca atccgttgat gttcaagaag
     4381 gtttcctgtt ggccggcaaa tgatgcgtcg ggcaggtctt cggcggttgc ggaagagcgt
     4441 acggcaacgg aaatgtccgc accgccggca tcggcaacca ttttgttcca tgccgcttcg
     4501 atttcggcat cgagctgttc ggggaagggc gtgtccaaaa tccattggcg gatttctttg
     4561 ccgacgcgtg ccagttcggc aacgtcttcg acatctaatt ttgccagtgc ggcggaaatg
     4621 cgttcgctca gaccgttgtg tgcgaggaat gcgcggtagg catcggctgt ggtggcaaag
     4681 ccgccgggga cgcgaacgcc tttttcggtc agctgactga tcatttcgcc cagcgaggcg
     4741 tttttaccgc ccacgcgttc aacatctgtc atacgcaggt tttcaaacca gattacgtag
     4801 ttgtcggcca tttgtgtgtc caatccaaaa tatgttaaaa aagaaacaaa tccgcgtgct
     4861 tattttaagc gattcgttcc tctgctgtca tgtgttttat ccgttttaaa atcatgatgc
     4921 cgtctgaaaa attgcggttt cggcgtgtgt agcggtttga aacttgcagc cggtatactt
     4981 ctttttttgg gtattttctt tgtaaaacag gtggtttgaa taggttaatg ttttttctgt
     5041 ttgatttttt tgtttatttt ttaaaatttt ctgccaaaaa atactttata taaataattt
     5101 tatttcaaaa ttatattgtg tctgtttggg tgtaatccga ggtaggcgtg ctgcgggtgc
     5161 tttccttgtg tctgccgctg ctgttatgat gatattttta ttctgtattt aaggatggaa
     5221 gatgagcagt ccgcgccatg tgttttacat ttccgaccgt accggtctga ctgccgagaa
     5281 tatcggcgag gctttgctga accagtttgg caatctgtcg ttcaaacgcc atacgcatcc
     5341 gtttgtcgat acgccggaaa aggcgcgcgc ggtggtggag aaggtcaatc ggagccggca
     5401 ggaaaacggt cagcgtccga ttgcgtttgt cagtgtggtt gatgacgaaa tccgtcggat
     5461 tatcaaaggg gcggatgctt ttcagattaa tttctttgag acttttttgg gactgttgga
     5521 gaaagaactc aataccgaag ccacggcatc cgagcagggg catcacagta tcggtaatac
     5581 gaagcgttac gatgcgcgta tggaggcggt gaatttctca ttgaaccacg atgacggggt
     5641 cagcgataag aaccttcagg aagcggatgt aatcttgatg ggtgtatcgc gttcgggcaa
     5701 aacgccgacc tgcctttacc tcgccctgca atacggcatc cgtgcggcaa actatccgct
     5761 gattcccgac gatttggaat cggccgatct gccgcgtatg gtcaagcctt atagggataa
     5821 gctgttcggg ttgaccatcc agccggaacg tttgcaggcc atccgccaag agcgccgccc
     5881 gaattcaact tatgccaaaa tcgatacatg ccgcagcgag gtggcggacg cgcagagtat
     5941 gttcagacgg catggcattc cgtttgcgaa tacgacggat aaatcggttg aggaattggc
     6001 ggtacacatc cttcaggcgt gcaagctcaa acgcaggttt tgacgggctt tgattcggtt
     6061 tgaaggcgga actgccgtct gaaatcaggt ttcagacggc
//
LOCUS       DAWEYF010000121         6087 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.121, whole genome shotgun sequence.
ACCESSION   DAWEYF010000121 DAWEYF010000000
VERSION     DAWEYF010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6087
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.121"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            57..1610
                     /locus_tag="WGN93_001582"
     CDS             57..1610
                     /locus_tag="WGN93_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ0227475.1"
                     /translation="MNRTYANFYGMLAAACRKNGNGTAVFEGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTGKSRPVGETAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQTLLKRATVFLGVPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEVKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(1700..3727)
                     /locus_tag="WGN93_001583"
     CDS             complement(1700..3727)
                     /locus_tag="WGN93_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ0227476.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLAVLVLTVPDQAQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEIGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            4016..6022
                     /locus_tag="WGN93_001584"
     CDS             4016..6022
                     /locus_tag="WGN93_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ0227477.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
BASE COUNT         1554 a         1854 c         1423 g         1256 t
ORIGIN      
        1 cggcatattg ttttcaaatg agggcgttcg ccgtccgcaa ccataaagga agtttcatga
       61 accggactta tgccaatttc tacggaatgc tcgccgccgc ctgccgcaaa aacggcaacg
      121 gcacggcagt gttcgaaggc aaggaaaaaa ccgcctaccg cgcactcaag caggaagccg
      181 aagccgttgc ggcgtatctg caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg
      241 cggtttccaa ttccacagaa tttattaccg cctatttcgc cgtctccgcc atcggcgcgg
      301 tcgccgtacc gatgaacaca tttttgaaaa acagcgaata cgcgtatatc ctgaacgact
      361 gcaaggcgcg cttcctgttc gcctcggcgg gcctgtcaaa agaattggcg ggcttgaagg
      421 cgcaaacgcc cgtcgaaaaa atcatttgga cgggcaaaag ccggccggtc ggcgaaacgg
      481 cggaaggcga tgcctttttt gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc
      541 gacaaccccg gataaatgat ttggcacaca tcatctacac ctccggcacg acggggcatc
      601 ccaaaggcgc gctaatcagt tacgccaacc tgtttgccaa cctgaacggc atcgaacgca
      661 tctttaaaat ttccaaacgc gaccgcttta tcgttttcct gccgatgttc cacagcttca
      721 cgctgacggc tatggtgctg ctgccgattt atatggcgtg ttcgattatt ttggtcaaat
      781 ccgtttttcc gttttccaac gttttgaaac agacactgct caaacgcgcg accgtgtttt
      841 tgggcgtacc cgcgatttac accgcgatga gcaaggcgaa aatcccttgg tatttcagat
      901 ggttcaaccg catccgcctg tttatcagcg gcggtgcgcc tttggcggaa caaaccatcc
      961 tcgatttcaa agccaagttc ccccgcgcca aattgctgga aggctacgga ctgagcgaag
     1021 cctcacccgt cgtcgccgtc aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc
     1081 ccctgcccgg tttggaagtc aaagccgtcg atgaagaact ggtcgaagtg ccgcgcggcg
     1141 aagtgggcga actgattgtc aggggcggtt cggtgatgcg gggctacctc aatatgcctg
     1201 ccgccaccga tgaaaccatc gtcaacggct ggttgaaaac gggcgatttc gttaccatag
     1261 acgaagacgg ctttatcttt atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc
     1321 aaaatgtcta tccgcgcgag attgaagaag aaatctacaa actcgatgcc gtcgaagccg
     1381 ccgccgtcat cggcgtgaaa gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat
     1441 tgaaggaagg tatggatttg ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg
     1501 caaatttcaa aatccccaaa caaatccact ttaaagacgg gctgccgcgc aacgctacgg
     1561 gcaaggtatt gaaacgggtg ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc
     1621 gtccgaagcc ccgtccggca aaaaaaatgc ggtgaatctg cttcaccgca ttttttggca
     1681 aacgccggag ataaggcact tactctgcca attccacctg ctcgtgcgcc atcagttcct
     1741 gaccgacatc atccaacaac atcaaataac gttcgtagtt tttcaaaatg tcggcaatca
     1801 gctcgtcctt gttcatatac tgtacatcgt acccgacgcg cccgtcgaaa aaataagcgt
     1861 agggtttgta agttgtctga tgccggatat gcggcagctt gccgtcgtta atcaactggt
     1921 cggatacatc ctgcccgaca gacttaatcc cgtacataaa atcgcgcatc gtctctttcc
     1981 gaatgacgaa ctcgattgcg ggctcgtcct gatgaaacat cttatcgacc cggacgctca
     2041 agccgtattc ttccgaaagc tcccgttgca actcgtgcat agcgggcgat gcggtatgtt
     2101 tgaggaattt taaaatatcc tgctcctgcg tctggctcat tatctgcacc agccgttctt
     2161 tccacttgcc gcccgtccaa aatacactgg tagggttaac ccgggtctca aaatatttct
     2221 tatccgcact caatcctttc cacaggctga aacacattat cagcatcagc agggcaaacg
     2281 gcagggaaac aatcagggtc atagactgca ggttgccgag tccgcccgag cgcatcagca
     2341 aaacggcaac ggcagacatc agcacgcccc acataaccgc ctgccaccgt ggcgcgctca
     2401 agcccttgtc ccgagaggta atattgttca ggacataaat cccggaatcg gcagaagtta
     2461 caaaaaacag agaaatgacc agcaggctga cgatactcgt caattcgggc agagggaggt
     2521 aattaaagaa tttaaaaagc agcgtttccg gagaggaggt catcttttcg agcattcccc
     2581 ccgcaacccc gtcattcagc caaatcgccg tattgccgaa gacggtaaac cacaaaacgc
     2641 cgaacaggcc ggggatgagc aaaaccccga agacaaactc gcggatggtg cgcccctttg
     2701 aaatgcgcgc gataaacaaa cccacaaacg gcgcccaaga acaccaccac gcccaataaa
     2761 gcaccgtcca agattcaaac cacggcttgt gttcccgttc gtacgcataa gttttaaaac
     2821 tgaggcgcac cagatttccg aggtagttcc ctatgttgtc gccgaatgcc gacaacaggt
     2881 aaacagtggg acccgccgcc aaaacaaaaa acagcagcaa aaacgcaagg ctcaggttca
     2941 actcgctcaa caccttcacg cccttcccca cgccggatat tgccgaaacg acggcgaggg
     3001 acatgacggc ggcgataatc aaaacctgca cgctgaagct gttttcggca atccagccta
     3061 tttcctgcaa tccggcgccc agttgcgaag ccccgaaccc caatgtggtg atgatgccga
     3121 aaaaagtagc aagcaacgcc ataatatcaa tggcatcgcc gaaccttccg gaaatttttt
     3181 ctttcaacag ggggtaaaaa caagaacgca gggcaagcgg cagcttgtag cggaaaccga
     3241 aataagccaa agccaatgca atcgtaccgt acaccgacca agcgtgaacg ccccaatgga
     3301 acaccgtgtg cagcaatgcc tgctgctgcc tgtgttccgg cgtgccggcc gtaatgtccg
     3361 aaaaataatg catcaacggc tctgccacgc cgaaaaacat cagacccacg cccatcccgg
     3421 ccgcaaacag catcgccagc cacgacagga agccgaattc cggcacatct tcatcccgtc
     3481 cgagcctgat gtttcccaaa ctgctgaccg agagtatcag caggaaaccc agaaaaatgg
     3541 aaaacgttaa aacataaaac cagctgaact cggtaaaaat gacttctttt gcccgatcga
     3601 gccacatctg cgcctgatcc ggcacggtta aaaccaatac cgccaaaaca cacacaaaaa
     3661 acaaagtcgt caaaataacc atcggattaa atgacgttcg gcgttctata aattcagaca
     3721 gggacaaacc ttctcactcc tttgttaaaa acagacaaac ccggtcatcg ggcaaagcgg
     3781 tcaaaacctg ccggtaaaat accggcttcc ggatgacgaa atgcacaaac cggccgaaat
     3841 tgttataatc gaaaaaatta aaaatcaata cggattattc tatcagattg atttatcgat
     3901 atttattata tcattaatat agtttgattt caaaccggcg gaaaatgcgc cgcccaccgc
     3961 aggcgcgccc tccccgccat cggggcgttt aacgccggat tgccgatgcg gtacaatggc
     4021 tgatatgaag aaaattaccc ctcaaaacct acgccccctg ctttcggaaa gcttgggaca
     4081 taccgatttt gtcaacgtcc tcaacgcact gattaaattt ttgcgccgtg gcggcaaaaa
     4141 atgtgcgggg gaacgtttcg acctgattat cgacacattc aaacaagaca gggaattact
     4201 gtcccgcttc agccggtgtt tttacatctg gctcgcgcaa atacacattt atccggcact
     4261 catcaaactc ggcatcttct cgcgccacag ctttgcccgg gaaatgggca tacgcatcta
     4321 cgaacgcttc agcccgtcat ataaagattt tgccaacttg ggcgaagtct tcctttatct
     4381 tttccattcc gaaaacgacg acaaatggct gcaaacgctc aatatccgcc aatggctggt
     4441 tttatacgaa ctcatccgga gccacgccga gccgtccaaa ttgcagacgg cgggcatccg
     4501 ccttgccgat gcgcgtttgc gcgccatcga aatgctgtct gtctggacgg catccgaagc
     4561 catcgaaccc gacctcatcc gcatcgcccc gcgcctgctg gaagccgatt cttccttcgt
     4621 cgccctccaa cgcgaaaccg ccaaactggt cgaacactac cgcaacggca ccacgcctta
     4681 cgacaccgcc cacctcgaag tgatgttcga ccaatgtttc agccagattg actatttgcg
     4741 ccgcaaaggg acgggcgccg gctccggttc gtcggtcaaa gtcgcccacc tgctcgaacg
     4801 gctccggcag accgtagacc gtctgaagct gctcaccgac atccaaaccg gcgccggcaa
     4861 cagcaaccgc ctgaccatcg cgctgatgaa ctccctcatc tacgcggcgg tcgaacaata
     4921 cagcacccgc cacctgcgcc gcagcagcat ccgtatgctc gcccgcagca ttaccgaaaa
     4981 caaaagccac cacggcgaac actacatcac ccgcaaccgc aaagaatatt tcaaaatgtt
     5041 ctactcggcg gcaggcggcg gcatcatcat cgccctgatg gcgctgctca aaatccgcat
     5101 cggcacactc ggcctcagcc ccttcctgac ttccttgtcg gctgggttca actacggcat
     5161 cggctttatg atcatccata tgctgcactg caccgtcgcc accaaacagc ccgcgatgac
     5221 tgccgccagc tttgccgaac aggtcgatct caacgaaggc ggcaaagcgg tggacaacaa
     5281 actcgccaag ctcctcatcg acgtatgccg ttcccaaagt gtcgccgttt tcggcaacgt
     5341 ttccatcgcc atccttttgg cgtgcgccat atcgttcggc tatgcccatc tgtaccggca
     5401 gcccatactc gatgcccaca ccgccgccta ccagttcaaa tccatagaca tcatcgctta
     5461 cccgacgctg tggtatgccg ccattgcagg tctatggctg ttctgctccg gcatcatcgc
     5521 aggttttttc gacaaccgcg ccgactacct caacctgcgc caacgcctgc ccttcaaccc
     5581 cttgctgcgt aaaatcatgc gccccgggcc ccgccgcgtc ctcgccgcct acatccacaa
     5641 acactacggc tcgttggcag gcaacttcat cttcgggatg ctcttgggta tgaccggcta
     5701 tttcggacac ctcctcgggc tgccgctgga catccgccac gtcgcctttt cctccgccaa
     5761 cctcggctat gccgccgtca gcggcaacgt cggtttgggc acgttcgtac tcggcatttt
     5821 cagcgtcctc gccatcggcc tggtcaacct ctgcgtcagc ttcagcctcg ccctcttcgt
     5881 cgccctgcgc tcgcgcggca cgaaaatcgg cagcatccgc aatctgatta agagtttttg
     5941 gaatcagatt aaaagcaatc cctgcatact tttcctcccg cccgccaaag aacagggaca
     6001 tcctccttcg gacaagcctt gaccggcaat gccgtctgaa gcgggattcg ccccgaatac
     6061 cgccctgatg cgggaaatcc ccataaa
//
LOCUS       DAWEYF010000122         6023 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.122, whole genome shotgun sequence.
ACCESSION   DAWEYF010000122 DAWEYF010000000
VERSION     DAWEYF010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.122"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WGN93_001585"
     CDS             complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WGN93_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ0227478.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WGN93_001586"
     CDS             complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WGN93_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ0227479.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYLSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WGN93_001587"
     CDS             complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WGN93_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ0227480.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIASITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1357 a         1708 c         1619 g         1339 t
ORIGIN      
        1 aaagaaatgc cgtctgaaac cttatcgttt cagacggcat tttattgccc gaccggttat
       61 ttgtcggttt gggtatcccg tttcaatccg ccgccgagtg ccttgtacaa atcggcaagg
      121 ttttcggcgc gggtcagttg tgccgacaaa gccgcaccct ccgccgcata gctgctgcgt
      181 tccgcatcga gcaagtcgag cgcgccggat acgccgtgct tgtaacgcag gccgaccaag
      241 cgcaacgctt ctttagaggc gcggctttgt ttgcttaaag cgtcataggc tttatccagc
      301 tgctcgcgcg ccgccaatgc gtttgccacg tcttgaaatg cggattggac ggcggattca
      361 taggcaacga tttgtgcctg ttggcgcagc ttggctacat caaggttcgc cttgttcgta
      421 ccccaggtaa aaatcggcag ggtaatagac ggcgcgaacg accaaacgcc cgtgccgctt
      481 ttgaacagcc cacccaattc ggcagaaccc gtaccgacgg ttccggtcag gcggatggat
      541 gggaaaaagg cggcgcgtgc cgcaccgata ttggcgtttg cctgtttgag cgcgtgttcg
      601 gcagcacgga tatcgggacg gtcgagcaat acttcggaac tcaaaccggc cggcagcttc
      661 tcaacaaaaa actgcttgtc caacggcaaa ccggcgggca ggtcgtcggg tatcggttgg
      721 ttaatcaggg ttgccaaggc attgcgcgcc tgttcgcggc tgcgcgcggc atgggcataa
      781 tcggctttgg cagattcgat tagggcttcc tgctgacgta gggcgacggc ggaaatcacg
      841 cctgccttgt aacgtaattc ggacagcttg taggtttcct cgcgcgtttt caaaacacgt
      901 tgcgccaaag acatcgcttc ttcggcgtaa cgttcgttga aataggcttt ggcaacggtg
      961 gcaatcaggc tcaaatgtgc cgcatcgcgg ttggcggtgc tggcgaaata gccttgcagt
     1021 gccgcctcgc tgctgctgcg tacacgcccg aacagatcga gttcgtaaga tgccgcaccc
     1081 agtccgactt tgtagctgct gcttacattg ccgccgctca agctgccttg gcgcgagccg
     1141 ttcgcattgg cggcaagcgt gggcaggagg ttgttgcgct caatcatgta ttgtttgcgg
     1201 tagatttcgc tgttcaatac ggcggtacgc aaactggtat tgcgctcgag tgcgatgtcg
     1261 atcagctttt gcaggcgcgg gtcggcaaaa tagtcgtgcc aacccaaatc gacggcgcgg
     1321 atgccgctgt cggcggtatc gtttttgaac gtttcggcaa cttcgacttt gggctgctcg
     1381 tattggggaa tcatggtgca ggcggataat gcgaaggctg ctgcaacaga agtcaaggtg
     1441 gttttcaatg tagtatccat aaaaaagtcc tgatgccgtc tgaaaacccg tgggcgttca
     1501 gacggcatgg ttgcttaatg ttggctgtcg tccgaaccgg tgatgcccgc ttcggcagcg
     1561 tgttttactg ccatttcgtg ttcgtgcgcg gtttctttga agaatttgcg caccaccaca
     1621 tagaaaagcg gaacaaggaa caccgacaag agcgtgccga tgagcatccc ccagaatacg
     1681 gttgtaccaa tggcgcgctg gctggcagaa cttgcaccgc cggcaatata caggggaacc
     1741 acgcccaaaa taaaggcaaa cgaggtcatg ataatcggac ggaaacgcag gcgggctgct
     1801 tccaaagcgg cttcaaccgc gcttttccct tgcgcttgaa ggtctttggc aaattcgata
     1861 atcaaaatcg catttttcgc actcaaaccc atcacggtaa cgaaaccgac ttgaaagtag
     1921 atgtcgttgg cgaacgaggg aacgctgccc aacagtcctt caaacaggtt gcgcccggtt
     1981 acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc cagcggaatc
     2041 gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc caaaccgtac
     2101 aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc ccattcgaag
     2161 ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc ctgcccggtg
     2221 gaaacgccgg ttgcaggcga agcggacagc ttcatcgaag gataaccgtt gaagcgtacg
     2281 ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg tacggcgacg
     2341 ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg ggcatcctcg
     2401 tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct gacataagac
     2461 gaactcagcg cgcttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc ttgcgccgcc
     2521 gcggcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc gccagcacgg
     2581 acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcaactc gttgcgcttc
     2641 gccagcaatg cggtatggcc ggtattattg cggtcttgca ggttgatgct caggcccgaa
     2701 ccattgccca actccagaat cggaggcggg acgacggcga tgccaaaacc gtctttaagc
     2761 gtccccatca tcatacccgt cagcttgccg gcaatcgcaa cggcatcgct gccgggcgcg
     2821 gtacgctcgt tccaatcttt caatatggca aaacccatcg ccatattctg accgctgccc
     2881 gaaaagctga agccggaaac ggtaatgatg ttttctattt caggaatgct tttcgccagt
     2941 tgggtaactt gcgccaaagt cgcattggtg cgctcttggg tcgctcctgc aggcagttgc
     3001 acgctgacca tgacgaagcc ttggtcttcg gtcggcagga atgaagtcgg caggcgcata
     3061 aacaggaaca cgcccacaac cgccaaaccg atatagacaa ccatcatgcg gaaagtctta
     3121 cgcagcactt tggcaacccg gccttcgtaa ccgtgcgtcc aactattgaa tttcttgtta
     3181 aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt cttcaacatt
     3241 gtggcacaca aagcaggggt aagggtcagc gcaaggaaag cggagaatgc gattgatgac
     3301 gccatcgtca gggcaaactg tttgtaaata ttgcccgtcg ccccgctgaa catcgccaac
     3361 ggtacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga aatctgaccc
     3421 atcgcttttt tggtcgcttc tttgggcggc aagccttcac ccgccataat gcgctcgacg
     3481 ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaaaac catcgcaaac
     3541 atggtcagta cgttaatcga catgcccata taagagatga aggcgaaacc gcccaacagc
     3601 gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag gaagagatac
     3661 attacgacaa acaccagcac catcgcttcg attaaagtgt gaatcacttt ttcaatcgaa
     3721 atttcgacga atttggaagt atcgtaaggg gttttccagc tcataccctg aggaaagtat
     3781 ttttccaacg tcgccatgcg ttctttaacc gcctttgccg tcgccatcgc attgccgctg
     3841 ttggacagca tcaccgccat accggtggta tttacaccgt tcagacgggt tgaggaagaa
     3901 tagtcttcca tacccagtcc gacccttgcc acatccttca ggtaaacatt agaaccgtcg
     3961 gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg cccttgcgcc
     4021 gttacggtag ccgtaaccgt ctgtccgcga acggcgggaa gcgaaccgat agaacccgct
     4081 gaaatctgga cgttctgggc ggacagcgca ctgccgatat cggcaaacga caaattgtag
     4141 ttttgcagtt tcttaggatc aacccaaatc cgcatcgcgc gttgcgcgcc gaacaggcgt
     4201 acctgcccca cgccttcgat acgctgcaac tcgggaacga tattacgctg cgcgtagtcg
     4261 ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag gaaattggaa
     4321 cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt gctcaatact
     4381 tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc gggcgtaaag
     4441 gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacaaata atccaaacct
     4501 tccacgccgt tcatattccg ctcgatcacg gaaagcacgc tgtcttccat tacctgcgcg
     4561 gacgcacccg gataagtggc gtgcaaagta atggtcgggg cggcgacaga cggatattgc
     4621 gaaacaggca ggcttttgat gccgaaaata cccgccgcaa taatgaaaat cgaaataacc
     4681 cacgcaaaaa tagggcggtc gataaaaaat ttagccatcg atgccttcct tattccgctt
     4741 cagaagcagt tttggcttca gatgccgtct gaacgccgga ttgaggcgcg gcggcttggt
     4801 tttcagacgg cgcccattct ttgggcgtta cctttttcgc acccgttata ctggcgatac
     4861 tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca atccaattcg
     4921 taccctgctg ttgcgcaacc gttacctcgc ggggttccat accgccttgg gcattcacaa
     4981 tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg cggcacaaca aatgcgttat
     5041 ccaccgccac ttggtccatc agcacgcgca catacaggcc gggcatcagg atattctgat
     5101 cgttcggtac ggcggcgcgc agggtaatct gaccggtcga ttcgttgacg gtcggatcgg
     5161 caaacagcag gcggcctttt tcagggtaaa ctgtgccgtc gtcaaatttg atgccgaccg
     5221 caatcacacc atccgccgcc aacagtttgc cttcggctat ctgacggcgc aatttcatca
     5281 cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg atggttgcca
     5341 gcacggtcgt atcgcccgca ttcaacagcg taccttcgga aactttggac tgaccgataa
     5401 agccggaaat cggcgcggta atgcgcgaac ggttcagatt aatgccggca gatttgattg
     5461 ccgcctgtgc tgctttgaca cctgcctcgg cagaacgttt cgccgttacc gcagcatcgt
     5521 attcctgccg gctgacggct tcggcggcaa ccaaaggctt gtatcgcgcc aaatccgcat
     5581 ccgctttggc aagcgttgcc tgagccgttg ccagttgcgc gcgcgcgctt tccagacctg
     5641 cttcataagt ggaactgtcg atctgataca gcggctgtcc ggcacggaca taactgcctt
     5701 cttggaacag gcgtttttgg atgatgccgc cgacttgggc gcggacatcg gcggtacgca
     5761 gcgattccaa acgccccggc aactcgacgg tcaacgcgac ggtttgcgga tggacggtta
     5821 cgacaccgac gacgggcgca ggggcttccc gaccagcagg ctgcccgccc tgcgccgcgt
     5881 ctccgccttt accgcaagac gacagtacca atgcaacggc ggcagccaac gcggccgcac
     5941 gcatcgcctt aaaagcataa aaagccatta tttatcctat ctgtctggtt tgatgtaaag
     6001 ggttttgcca atcaacaggc att
//
LOCUS       DAWEYF010000123         5997 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.123, whole genome shotgun sequence.
ACCESSION   DAWEYF010000123 DAWEYF010000000
VERSION     DAWEYF010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5997
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.123"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(1..620)
                     /locus_tag="WGN93_001588"
                     /pseudo
     CDS             complement(1..620)
                     /locus_tag="WGN93_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580358.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(1843..2088)
                     /locus_tag="WGN93_001589"
     CDS             complement(1843..2088)
                     /locus_tag="WGN93_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227481.1"
                     /translation="MLKSIELNSHIRNRLAEYLKGRGMDFQTAMQEEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            2200..2628
                     /locus_tag="WGN93_001590"
     CDS             2200..2628
                     /locus_tag="WGN93_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ0227482.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            2640..3116
                     /locus_tag="WGN93_001591"
     CDS             2640..3116
                     /locus_tag="WGN93_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ0227483.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISELSRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(3466..3954)
                     /locus_tag="WGN93_001592"
     CDS             complement(3466..3954)
                     /locus_tag="WGN93_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ0227484.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(4022..5077)
                     /gene="aroG"
                     /locus_tag="WGN93_001593"
     CDS             complement(4022..5077)
                     /gene="aroG"
                     /locus_tag="WGN93_001593"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ0227485.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWDATEE
                     LLALLAGANKKRMARAG"
     gene            complement(5239..5466)
                     /locus_tag="WGN93_001594"
     CDS             complement(5239..5466)
                     /locus_tag="WGN93_001594"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227486.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCSVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            5402..5634
                     /locus_tag="WGN93_001595"
                     /pseudo
     CDS             5402..5634
                     /locus_tag="WGN93_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212266.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5693..>5997
                     /locus_tag="WGN93_001596"
     CDS             5693..>5997
                     /locus_tag="WGN93_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227487.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVTATFYSQLKS"
BASE COUNT         1494 a         1464 c         1388 g         1651 t
ORIGIN      
        1 aagatgttgt tgagactagt ctgtgatgta ttactatgag gagtgagtac ggaatcttct
       61 accaatttat taattaaatc gggcatcgtc tgtttgagcg tactaaattt tgttccaaac
      121 tgtgctatat acgcctcctc agtccgtttt ttattttctg cccaagcttc cggtcttgtt
      181 ttgtataaat cctgtaattg acttttaacc gcctgcttta aatcagcccc atacttctct
      241 gtaatatatt ttttgacaac gggcatatta tcgacggcga ggatgccgct attgtaattt
      301 ttaccttgga tattgatttc gtcataccca tattcggatg aattttgatc ggttttaccg
      361 ctggaaaaat aatgggaagt gccgggtttc ggcttgtctg aaaatgaaaa atcggcatcg
      421 tcgccgattt tggtagaacg agtatttgaa ccaagctgag ctctgaacat accgaagcaa
      481 tcaaaagata tgctgcacgg gccgcgccaa acgtgggaat ttctgtcttc cgccgcttct
      541 aaaataaatt tgtttttaat ctcggcttct ttgacgggat cgtacgcatc cgaacctcaa
      601 acatatggcg tgcaaaacag cgataaaaca gataatgtta atagattaac ccgaccgctt
      661 gcttgcttgc ttgcttgctt gcttgcttgc ttgcttgctt gctttcagtg tcatgagaaa
      721 ttttcctttg tcaagtgtta aaattataat gattatatac tacattatac tacatcgcaa
      781 tgaaaaatca ggaaaagcaa aaaaccctcc gccgtcattc ccgcgaaagc gggaatctag
      841 aattttaatg ccgcaagaat ttatcaagga tggtcggggt ttaaaggtct ggattcccgc
      901 ctgcgcggga atgacggttt agaaatcacc cgaaacaaga aaaagaaccg aaaccgaaca
      961 agccggattc ccgcctgcgc gggaatgacg ggatttcagg ttactgtttt tgattttctg
     1021 ttttgtggaa ataacgggat tttggatgat gtgcatttat cgagaaaact aaaaaccctc
     1081 cgccgtcatt cccgcgaaag cgggaatcta gacctttcgg tgcggaaact tatcggataa
     1141 aacggttttc cctgcatcct ggattcccac tttcgtgcga atgacgggat ataggtttca
     1201 ctacggacgt gttcagatta ccgcctgcgc gggaaggacg ggatttcagg ttgctgtttt
     1261 tgattttctg tttttgtggg aataacggga ctttggatga tgtgcattta tcgggaaaac
     1321 aaaaaaccct ccgccgtcat tcccgcgaaa gcgggaatct agaattttaa tgcggcaaga
     1381 atttatcaag aaaaaccgaa gcttaaagac ctagattccc gcctgcgcgg gaatgacggt
     1441 ttagaaatca cccgaaacga gaaaaagaac cgaaaccgaa caagccggat tcccgcacag
     1501 gcgggaagga cggaatttca gattgttgtt tttgattttc tgtttttgtg ggaataacgg
     1561 gactttggat gatgtgcatt tatcgagaaa actaaaaacc ctccgccgtc attcccgcga
     1621 aagcgggaat ctagaatttt aatgcggcaa aaatttatcg gaaaaaaccg aagtttaaag
     1681 acctagattc ccgcctgcgc gggaatgacg gctcaaaagt tacgaaacga aaaataaccg
     1741 aaaccaaaca agtcggattc ccgcgcgggc gggaatgacg ataagcgtaa tttcaatctg
     1801 ccatattgtc ttttcacttg cctgaaaaca gatttcagcc acctatccct gcatccggcg
     1861 gctgatgtag tcggcaatca aatcccgctt ttcccaaaaa aacttctgca ttttttgttc
     1921 ggaatacagt ttgcggacca gagtgggcaa accgctgtgg acgatggcgg cgatttcttt
     1981 gttgcctttt tcttcctgca ttgccgtctg aaaatccata cccctgcctt tcagatattc
     2041 tgcaaggcgg ttgcggatgt gggaattgag ttcgatggat ttgagcattt tgcctccgtt
     2101 ttgcggtaag gatttattcg atttgtttat ccgcctgatt ttatcacgtt tcccaagcgg
     2161 tttgcctgta caataccgct tttcggcagg gtgtgggcga tgatgttttc ttggttcaag
     2221 ctgtttcact tgttttttgt catttcgtgg tttgcagggc tgttttacct gccgaggatt
     2281 ttcgtcaata tggcgatgat tgatgtgccg cgcggcaatc ccgagtatgt gcgtctgtcg
     2341 ggcatggcgg tgcggctgta ccgttttatg tcgccgttgg gcttcggcgc ggtcgtgttc
     2401 ggcgcggcga taccgtttgc cgccggctgg tggggcagcg gctgggtaca cgtcaaactg
     2461 tgtttgggct tgatgctctt ggcttaccag ttgtattgcg gcgtgctgct gcgccgtttt
     2521 caggattaca gcaatgcttt ttcacaccgc tggtaccgcg tgttcaacga aatccccgtg
     2581 ctgctgatgg ttgccgcgct gtatctggtc gtgttcaaac cgttttgacg gagcatctta
     2641 tgccgataga aatcgaacgc cgttttttga ttggaaacga caactggcgg caatacgccg
     2701 acgaacctct gctgttgagg cagggttatc tgtctgttga aaaagaacgc accgtccgtg
     2761 tccgtattgc cggacaacgg gcgtggctga cgctgaaagg ctatatttcg gaactcagcc
     2821 gcagtgagtt tgaatacgaa atcccgcttg ccgatgcgga aaagatgatg gaaacgatgt
     2881 gtccgtttaa gatggaaaaa tggcgttatc cggtcagatg gggcggcagc ctgtttgaaa
     2941 tcgatgtttt tcttggcgat aatgcgcctt tggtcgtcgc ggaaatcgag ttgcccgacg
     3001 agaatgccga ttttgaccgt ccggactggc tgggacggga aatcactgcc gacggtatgt
     3061 ttaccaatgc ctatttgagc aggcatccgt tctcaagctg gaaaaatgcc gtctgaagcg
     3121 gcttcagacg gcattctccg acaaccatcg caaatccaaa gacagcctct atatccttat
     3181 ttctgctttc tttgttccat tattcccaat aaatccccat aacctaaaat ctcgtcattc
     3241 ccgctcaggc gggaatccgg ttctttaaac ttcggttttt tccgataaat tgctttagct
     3301 tttcgtttcc ggattcccgc ttttgcggga atgacgatgg aagattgttg ttatttcgga
     3361 taaattaccc taactttaaa atcccggatt cccatcttcg ggggaataac aatattttct
     3421 atttcagccc atcatttgcg ggggatttta tagagagttt atatttcaat atctcaaata
     3481 atgcacaaaa gcatagcgcg tgcctttgct gctgacacgg cgttccgtcc gctctgcttc
     3541 tttccaatgc gtccggtcta ttgcggggaa aaatgcatct ccttccacag acaaatccac
     3601 ttcggttatc cgcaaatcgg tcgccaatgg catcgcttgt ccgtatatct gcgcgccgcc
     3661 cataatgacg gcttcttccg cgcctgcgca caatgccaat gccgcctcca aacttgccgc
     3721 cgtttccgcg cctgccgcgc aataatccgc ctgccggctg atgacgatgt tcctccgtcc
     3781 aggcaggggt ttgacgggca gggattccca cgttttccgc cccataatga cgggtttgcc
     3841 caaggtatag gctttgaaaa atgcgaaatc ttcggggatg tgccaaggca tagcattgcc
     3901 cgccccgatg cacaggtttt ccgcacacgc cgcaattagg gttattttga gcatatttcc
     3961 tccacaaaaa tgccgtctga acgcttcaga cggcatttta tgacattctg cgtcaaaaat
     4021 ctcaaccggc gcgcgccata cgttttttgt ttgcacctgc caacaatgcc aacagttctt
     4081 cagtcgcgtc ccaaccaata cacgcatcgg taatgctttt gccgtacact tccggcttgt
     4141 cctgcctgcc ttcgaccaaa tggctttcca ccatcacgcc cataatattg ccgccgtcct
     4201 gttccaattg ggcggcaatg tcttgcgcca cttccatctg ccgggtgtaa tccttgcggc
     4261 tgttggcgtg gctgcaatct atcatcagct tatcggttac ccctgccgca cgcagttgtt
     4321 ccgccgcctc gctgacgtgt cccgcatcat aattcggctc ttttccgccg cgcaaaatga
     4381 catgacagtc gggattgccg ccggtatgga caatggcgga atgtccggcc ttggttacag
     4441 acaagaaatg atgcgaatgg ctcgccgcac cgattgcgtc gatggcaatc ttcaaattgc
     4501 cgtccgtacc gtttttaaag ccgacggggc aggacagccc gcttgccaat tcgcggtgaa
     4561 cttggctttc ggtcgtccgc gcaccgattg ccccccaaga aatcaagtcc gcataatatt
     4621 gcggcgtaat catatccaaa aactcggtag aggcaggcat acccatattg ttcagcgaca
     4681 acaacaggct gcgcgcctga cgcaaaccga aattgatgtc aaacgtaccg tccaaatgcg
     4741 ggtcgttaat caaacctttc caacccaccg tcgtcctcgg cttctcgaaa taaacgcgca
     4801 tcacaatcaa aagctcgttt tcatactgct tgcggagttt caacaaacgc tccgcatatt
     4861 ccaacgccgc tttcggatcg tgaatcgaac acggcccgat aataaccaac agccgcttgt
     4921 ccctgccgtg aaccaaatcg gaaatttcct gacgggtgcg gtgaaccaag cccgaagcct
     4981 ctttggaaat cggcagctcg taaagatggg caatcggcgg caacaactct ttaacttctt
     5041 taatcttaat atcgtctgtg gggtaatggt gtgtcatctt gcatctttcc tgatggtttt
     5101 ttatacgcgg cttaggttac atcgtttacc ttgcacaaac aagtgcaaca tattactaca
     5161 aagctatttt atttcaaaat aactgatata tcttttttca tagattttaa atttcatatt
     5221 tttaatattt taggaatttt attccaaaga aaaagaaaca gattgataaa aacaataccc
     5281 gccattcatt cggacaaaac cgcacggaac atccgttttc ccatttccac gacaatccgg
     5341 tacagaacac cccgctgccg attccgcctg cacatccggc aaaatttcat acgcaaggaa
     5401 aatgttgaaa acaaaaagaa ctaattgctt gaaaaaagat ttaattggaa tgcgggtatt
     5461 tcccacactt tctccattta ttcatcctca ttataggaag aaaaacatga aaaaaccctg
     5521 cttgcactct cacttgcagc cgtgtccgcc gttacggtag ccgatattcc tgagtctaac
     5581 ggcaagggca aagccatcat cggcgataag gaaaaacacc gttaccaagc atgaaaacct
     5641 tgttttgaaa gtctatggcg aaatccgcca agatttgggg gacggatgat ccctgacccc
     5701 ttgggcggat gcatatgcag atttgcgcgg caaaaccaaa gtgatgacga cccagatgtg
     5761 tgcttcccgc gatgtcagca aaagcgccaa aggttggagt gtcggtatcg gtctgaatgt
     5821 aggcaaacag ttgaccgaca gcgtcggtct cgagtttgat ccatactacc gtcacaaaac
     5881 aatctgcaaa ccccgtgaga ttgttttgga cggcgacaaa accaaaatgg gccgctccaa
     5941 atccaacgag tacggcttcc gcgtaaccgc aacgttctat agtcaattaa aatcaaa
//
LOCUS       DAWEYF010000124         5989 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.124, whole genome shotgun sequence.
ACCESSION   DAWEYF010000124 DAWEYF010000000
VERSION     DAWEYF010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.124"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            59..505
                     /gene="yciA"
                     /locus_tag="WGN93_001597"
     CDS             59..505
                     /gene="yciA"
                     /locus_tag="WGN93_001597"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ0227488.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKIEVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(556..1377)
                     /locus_tag="WGN93_001598"
     CDS             complement(556..1377)
                     /locus_tag="WGN93_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ0227489.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1496..1954
                     /locus_tag="WGN93_001599"
     CDS             1496..1954
                     /locus_tag="WGN93_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ0227490.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2118..3233)
                     /gene="lst"
                     /locus_tag="WGN93_001600"
     CDS             complement(2118..3233)
                     /gene="lst"
                     /locus_tag="WGN93_001600"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ0227491.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNHGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFKQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            3334..3438
                     /locus_tag="WGN93_001601"
                     /pseudo
     CDS             3334..3438
                     /locus_tag="WGN93_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3666..5891
                     /locus_tag="WGN93_001602"
     CDS             3666..5891
                     /locus_tag="WGN93_001602"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ0227492.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTDGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT         1610 a         1754 c         1330 g         1295 t
ORIGIN      
        1 aacgccgtac tggtttaaat ttaatccact atatatttca ataaaacaag gaaactttat
       61 gcagcacgaa gaaggcaacc gccaacgccc tcaaggcgaa ctgctcctgc gtaccgtcgc
      121 tatgccgcgc gataccaatc ccaaccaaga cattttcggc ggctggatta tgtcgcagat
      181 ggatttgggc ggcggcatat tggcggcgga aatcgcgcgg ggacgcatcg ttaccgtcgc
      241 cgttcaggaa atgaacttta tccgcccggt caaggtcggc aacgtcgtct gctgctacgg
      301 gcattgcgtc cgcgtgggca atacttccct ccagcttaaa atcgaagtct gggtgaaaac
      361 tttgatgaac gattgcgtta ccgaagaccg ctacctcgta accgaagccg tgttcactta
      421 tgtcgccatc gatgcggaag gcaatccgcg cccgattccg aaagaaggca accccaaatt
      481 ggcgggctta ttgcctactc cgtaaaaatg cccgtaaaaa tgccgtctga aactgtcttc
      541 agacggcatt ctgcatcatt tgaaccaaga cctgatgcgg gaaaacagcg acatactttg
      601 tttttcaaag tcttcccgca cttcgggcac ggcttttttt atcactttca ttcctgcaaa
      661 agtctgcgcc acgggcataa tttcaatcgt gttcacattc atatgcgccg gccggcggta
      721 cagccacaat gcggtttccg caatatcttc ggggcggata aattccacac cctcatacac
      781 gcctgctgcc ttctcgtcat cgcctttgaa gcgcacgttg gaaaactccg tattgccgca
      841 caaacccggc tcgatattgg taacgcggat gttcttatcc gccaactccg cgcgcaaatt
      901 caggctgaac tggcgcacaa acgccttggt cgccccgtaa acgttgctgc cggcataagc
      961 ataattgcct gcaatcgaac ccaaattcat cacataaccg ccgccgcgtt ccaccatttg
     1021 cggcaaaatt ttgcgcgtca ggaacgtcaa acccaaaaca ttggtttgaa tcatcgtttc
     1081 ccaatcttca aaatccgcct tgtccgccgt gtccagaccc aaagccagcc cggcattgtt
     1141 gatgaggcag tcgatgtcgg aaaattcatc ggggatgccg tttaaggcgt tttccaccga
     1201 ctcgcgtcgc gacacgtcca tttccaaagg gtaaaacaaa gcacccaatt catccgccaa
     1261 ggcctgaagc ctgtccgcac ggcgcgccgc accgataacg cggtatcccg ccccgacaaa
     1321 cgcacggcac atcgcttcgc cgaatcctgc cgaagcaccg gtaattaaaa cagccattgt
     1381 ttttcctttc tttctcgttt cccaaacctg tttcaggtat cataacgctc ttcagacggc
     1441 atcgcgccgg ctgaaaatga caacaaccat accaccacga caggacacat tcaatatgaa
     1501 aacccaaatc agccttgctg ctgccgccat cacactgctc ctttccgcct gcggaggcag
     1561 cggaatacct tcccaaccca aaggcgaaat ttccgaaaac cgcaccgccg cgttcaaatc
     1621 catgatgccc gaattcacac gcatgggcaa aatggtcaaa gacgaagaac cttacgatgt
     1681 cgaaaaattc aaacaggctg ccgcggcgtt tgccgacagc agcaagaaac cgttcacact
     1741 ttttgagtcc gatccgcaag gcaacggccg cgccctgccc gccgtttggt cggatggtgc
     1801 aaaatttgaa gccgaaaaaa caaaattcgc cgccgccgtc gaaaaactca acgccgcagc
     1861 acaaaccggc aaactggatg aaatcaaagc cgcctacggc gaaaccggcg caagctgcaa
     1921 atcctgccac gacagtttcc gcgcgcccga ataacatcca aaacaaaaca atgccgtctg
     1981 aagccttcag acggcatttt ctttgccatt tcagcacacg caaagcaatc agaaattatc
     2041 ttcaattcaa aaaatacgcc atatcctgat ttttgcctta cttactccgc cattttctat
     2101 tttgatttgc tatgcgatta atctttatcg tcaaatgtca aaatcgggat gccggattgg
     2161 gtaaacaggg catacaccgg cttgagccaa taatcttccg gaagggaagc cggtttcaat
     2221 gcgtaaacgt gcacattggg aaaatccttc atcgtcaacg ccgcgccgct gaaaaaggta
     2281 taaatttcat acctcgtatg cgggtttttc ttaatctcgc gcaaaatata gtcttcgatg
     2341 acatagggcg aatttaatgt ggttacgccg gaaagcccgt aggtttggcg ggggtgcggt
     2401 gcgacatatt gtatgttgaa gttttttgcc gccttttccg aaatttcctt catctccttg
     2461 tcgggcgaac ccaaaagtat ccgcaccgtg ccgcccgttt cgtcccccgc cttcagttcg
     2521 gacgcatcga acagcggcag gtaagtcatc ttgcggcggc cgtcgtccat aatgtttttc
     2581 aaacccttga atatcgtgta atgctcgtcg gaagcattac gggttttggc gatgctccaa
     2641 tctccgatca tcatccgggc aaaattccgc ttgatcgtcc cgtttacaga aaactcatcg
     2701 cccaaatagc tgctgctttg aattaaattg cctgtcccgt cgtcaaaggt tttgatttcc
     2761 gcatccgggt aagtgctcaa aaaggcggca atgctgactt tttccaaact tgccaaataa
     2821 atccgcttga ctttcggcag cagcatcgac tttaccttca gctccgccat cgtcggaatg
     2881 aaattaaacg atttgttcaa accgtagggc aggtggaaaa aatacgcccg ctccgcctta
     2941 tcctttatct gcttgaaata ataatcgtat ttttcattcc tgttttcaga catcagcacc
     3001 acataaaacc gctcccccgg atgctgcgcc ataatccttt ccgccacctt catctgcaat
     3061 atggtatagc agaaaatcag attgaccggt tccccctctt cattgaagag tttgtccttc
     3121 agcagggaaa ccgcattcct ttccccatga tttacccggt caaatgtata aaatatcccg
     3181 aaacaaaaaa caatcaaaca caacacggtc aaacaagcct ttttcaagcc catatcccta
     3241 aaactccatt ccgacaaatt gaacatacgc cccgagtgtc ccgggacgga aaaatgcgga
     3301 attttagcag atattccgac agttaccgaa tattatagtg gtttaaattt aaatcaggac
     3361 aaggcgacga agccgcagac agtacaagca gtacgacaag gcaaggcaac gctgtactgg
     3421 tttaaattta aaccactata aaatcaattt caccgaaaat atgccgccgc acatcaggca
     3481 cagcacctcc gaccgccacc aaacgcggga aaaccatttc ccccttcctt tcacgctgcc
     3541 gcgttcaaac acgccaagat cgaacaaagc gcgaacaaag ccgccaaaat atgccataat
     3601 agccgcgcac attccccgcg caatgtgttc caaaagaaaa aaccaaccta caagagaata
     3661 atcctatgac tcaaaaatcc accattgttt atacccatac cgacgaagcc cccgcgctgg
     3721 cgacccaatc gctgctgccg attgtgcagg cttttgcccg ccacgccgat attgatgtca
     3781 aaactgccga catttccctg tccggccgta ttttggcggc attccccgaa tatctgaccg
     3841 aagcgcaacg cgtacccgac gcgcttgccg aattgggcga actggtaaaa caacccgatg
     3901 caaacgtaat caaactgccg aacatcagcg catccgtacc gcaactgacc gccgcgatta
     3961 aagaattgca gtctaaaggc tttgccgttc ccgattatcc tgccgacccg caaaccgatg
     4021 aagaaaaagc cgtgcgcgaa cgctacgacc gcatcaaagg cagcgcggta aaccctgtcc
     4081 tgcgtgaagg caactccgac cgtcgcgccc ccaaagcggt gaaaaacttt gccaaaaaaa
     4141 atccgcacag catgggcgca tggacaaaag actccaaaac ccacgttgcc accatgcaaa
     4201 gcggcgactt tttccataac gaacaatccg ttaccgtacc tgaagcgact tccgtatcca
     4261 tcgtgttcac cgacaaacaa ggcaataaaa aagagctgcg cgcgcctgtt gccctgaaag
     4321 ccggcgaaat catcgacgca accgtgatga gcaaaaaagc cctgctcgcc ttccttgccg
     4381 aacaagtgaa agacgcgaag gcaaaaggcg tattgttctc actgcatatg aaagccacga
     4441 tgatgaaagt gtccgacccg attatcttcg gacacgccgt caaagtgttc ttcgcgcctg
     4501 tatttgaaaa attcggcggc aaactggctg ccgcaggtgt caacgtcaac aacggcttcg
     4561 gcaacctgct ggccaatctg gacaaactgg atgcggacac ccgcgccgcc gtcgaagctg
     4621 aaatcgccgc cgtttacgcc gccaaccctg atttggcgat ggtcgattcc gataaaggca
     4681 ttaccaacct gcacgttccc agcgacgtca tcgtcgatgc ctctatgcct gcgatgattc
     4741 gcaattccgg ccggatgtgg gacaaagacg gcaaagcgca agacaccaaa gccgtcattc
     4801 ccgacagcag ctatgccggt gtttaccaag caaccatcga tttctgccgc gaacacggcg
     4861 cattcgatcc gacaactatg ggtaccgtgc ccaacgtcgg tctgatggcg caggcggccg
     4921 aagaatacgg ttcgcacaat aaaacttttg aaatcgaagc cgacggtcaa gtccaagtca
     4981 ttgatgcggc aggaaaagtc ctaatgcagc acgacgttga agccggcgac atctggcgta
     5041 tgtgccaaac caaagacgct ccggttaaag actgggtaca acttgccgtc aaccgcgccc
     5101 gtctgagcaa cacgcctgcc gtgttctggc tcgacgaaaa ccgtccgcac gacaagagcc
     5161 tgctcgccaa ggttaaagct taccttgccg aactggatac cgacggcctc gacatccgcg
     5221 tcctcgcgcc tgaagaagcc gccaagttca gcttgggccg tctgaaaaac ggcgaagaca
     5281 ccatctccgt aaccggtaat gtcttgcgcg actacctgac cgacctgttc ccgattttgg
     5341 aactcggcac aagcgcgaaa atgctgtcta tcgttccatt gatgaatggc ggcggtatgt
     5401 ttgaaaccgg tgcgggcggt tctgcaccga aacatgttca acaattcctc gaagaaaacc
     5461 atttgcgctg ggactcgctg ggcgaattcc tcgcactcgc cgtatcgttt gaacatttgg
     5521 cgcaaaaaac cggcaatgcc aaagcccaag tcctcgccga cactttggat gcagccaccg
     5581 aaaaactgct gttgaacgac aaatcgccta aacgtaaagc cggcgaactc gacaaccgcg
     5641 gcagccattt ctacctcacc ctctactggg cgcaagaatt ggcggcgcaa gacaaagatg
     5701 ccgaactgaa agccgcattt acgccattgg cagccgcttt gaccgccgac gaagcgaaaa
     5761 tcgttgccga gctttccgcc gtacaaggca aagcggccga catcggcggc tactacgccg
     5821 ccaatcctga aaaagccgca caagtgatgc gtccgagcgt aacctttaat caggcactaa
     5881 acgccttata agcacaaagg taaaaatgcc gtctgaacat tcgtcgttca gacggcatta
     5941 gttatcccta tctgcctgat tataattaaa cgccgcaccc attggatat
//
LOCUS       DAWEYF010000125         5971 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.125, whole genome shotgun sequence.
ACCESSION   DAWEYF010000125 DAWEYF010000000
VERSION     DAWEYF010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5971
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.125"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(40..963)
                     /gene="truB"
                     /locus_tag="WGN93_001603"
     CDS             complement(40..963)
                     /gene="truB"
                     /locus_tag="WGN93_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ0227493.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIAAARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYAIDI
                     AEFDSPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLDETERDSLLLPCDVLVAHFPQTVLNDYAVHMLQCGQRPRFDEDLTSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAVSAA"
     gene            complement(996..1367)
                     /gene="rbfA"
                     /locus_tag="WGN93_001604"
     CDS             complement(996..1367)
                     /gene="rbfA"
                     /locus_tag="WGN93_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ0227494.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            1558..2802
                     /gene="clpX"
                     /locus_tag="WGN93_001605"
     CDS             1558..2802
                     /gene="clpX"
                     /locus_tag="WGN93_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ0227495.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGKEPELVFES"
     gene            complement(2867..4060)
                     /locus_tag="WGN93_001606"
     CDS             complement(2867..4060)
                     /locus_tag="WGN93_001606"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinyldiaminopimelate
                     transaminase"
                     /protein_id="HEZ0227496.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTKGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGSEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATETIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVCSQGQKLQTALRSLGEQTGVFKQVRGMGLLLGCVL
                     DAPYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLDDEDTAEGLRRLEHVLTEFA
                     AANRP"
     gene            4464..4964
                     /locus_tag="WGN93_001607"
     CDS             4464..4964
                     /locus_tag="WGN93_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227497.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHPLPL"
     gene            5049..5603
                     /locus_tag="WGN93_001608"
     CDS             5049..5603
                     /locus_tag="WGN93_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227498.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            5617..5817
                     /locus_tag="WGN93_001609"
     CDS             5617..5817
                     /locus_tag="WGN93_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227499.1"
                     /translation="MPSEELSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
BASE COUNT         1414 a         1605 c         1624 g         1328 t
ORIGIN      
        1 acacattatt caaacacagc ccgtattttt aaccgccgtt caggcggcag ataccgccgt
       61 gttcatcagg cgcaaggctt tcagacggca tatttctttt tgatattccg ccaggccgac
      121 aaagcggccg ttttccgtgt aaacgcgtac cggcgtatcg gaagtcaggt cttcatcgaa
      181 acgcggccgt tgcccgcatt ggagcatatg gacggcataa tcgtttaaaa cggtttgggg
      241 aaaatgggca accaatacgt cgcagggcag cagcaggctg tcgcgttctg tttcgtccaa
      301 gtttgccaag gcttcgagcg tgtggctttg ggcgatggta aagccggcgg tttcggtgcg
      361 gcgcagggcg gtcaggtggg cgaacgtgcc gatgtgtttg gcgatgtctt cgctgagggt
      421 gcggatatag gtgcctttgc tgcaacgcac gtcgatgacg gctttgggtg agtcaaactc
      481 ggcaatatcg atggcgtaaa cggtaatatc gcgcggcttg cgttcgatga cgatgccttt
      541 gcgggcgtat tcgtacagcg gtttgccttc gtgcttgagg gcggaaaaca tcggcggcac
      601 ttggcggatg ttgcctgtca gggcttggca ggccgtctga aattcggcta aggaaatatc
      661 ggcgcgtgcg gcagcgatga tttcgccttc ggcatcaccc gtgctgctgg cttcgccgag
      721 tttcagcgtg gcggtgtagg ctttgtcggc atccagcagg tattgggcga acttggtcgc
      781 ttcgccgaag cagacgggca aaagcccggt tgccaaaggg tcgagcacgc cggtatgtcc
      841 ggctttttcg gcacggaaca aacgccgcgc tttttgcagc gcggtgttgc tggaaaggcc
      901 ttcgggtttg tccaagagca aaacaccgtt gacggcacgt ttttggggtt tgcctgtatt
      961 catggttcga tgttcggacg gcatgggcat atccgtcagt cttcaaccgg tttttccgcc
     1021 gctacttggt cgataagggc ggacaggttc aaaccgcgtt ccaaggattc gtcgtatttg
     1081 aaatgcagtt cggggatttt gaacagcttg atgcgtttgg ccaattcgct gcggaggtgt
     1141 ccgcgcgcgt gttccagcac ttcttccgta atttcgcgcg cgtcttggtt taaaatggtg
     1201 tagaacacgg tggcgtggct gtaatcgcgg gtaacttcga cttcgttgac ggtaatgaag
     1261 ccggcgcgcg ggtctttcag tccggtacgg acgagttcgg caagctcgcg cataatttgt
     1321 tctttgacac ggtcttggcg ggcatagccg cgttggggtt ttctcatgaa tatcctcaga
     1381 tttcagattt ggtttcagac ggcatttttg ccgccggggc ggttgcgaaa gggcgtatta
     1441 tagcctaatc ggcgggattt taaggtaata cattgataag aacggatata gttattatac
     1501 ttggcaaccc gaacggcacg tgccgttttc tgtaacgcat acattgtaaa gaaagccatg
     1561 tccaacgaaa accgtacctg ttccttttgc ggaaaatcca aatcacacgt caaacattta
     1621 attgagggcg aaaacgcctt tatctgtgac gaatgcgtct caaactgtat tgaaatattg
     1681 catgaagacg gaaatgacgg cacgccttcg gaaagtgccg gaggggagcc ggaagaatcc
     1741 ggcaagctgc ccacgcccgc cgaaatcgtc gccaacctca acgaccacgt tatcggtcag
     1801 gaacaagcca agaaagcctt ggcggtgtcg gtgtacaacc attacaaacg cctgcgccac
     1861 ccgaaagccg gagctaatgt cgaattgtcg aaatccaaca tcctgcttat cggcccgacc
     1921 ggatcgggta aaaccctgct ggcgcaatct ttggcgcgca aactggatgt gccgttcgtg
     1981 atggcagatg caaccacgct gaccgaagca ggttatgtcg gcgaagatgt cgaacagatt
     2041 attaccaaac tgttgggcaa atgtgatttc gatgtcgaaa aagcccaacg cggcatcgtc
     2101 tatatcgacg aaatcgataa aatttcacgc aaaagcgaca atccgtccat cacgcgtgac
     2161 gtgtccggcg aaggcgtgca acaagccttg ctgaaactga ttgaaggtac ggtggccagc
     2221 gttccgcccc aaggcggccg caagcatccg aatcaggaat ttatcaacgt cgataccacc
     2281 aacatcctgt ttatctgcgg cggcgcgttt gcaggcttgg aaaaagtcat ccgccagcgt
     2341 actgaaaaag gcggtatcgg tttcggtgcg tccgttcaca gcaaggacga aaatgccgac
     2401 attaccaagc tgttcggcat cgtcgaaccg gaagatttaa tcaaattcgg tctgattccg
     2461 gaattaatcg gacgtttgcc tgtgattgca acgttagaag aactggatga ggacgcgctg
     2521 attaatattt tgaccgagcc gaaaaacgct ttggtcaagc agtatcaagc cttgttcggt
     2581 atggaaaatg tcgagttgga atttgaagaa ggcgcattgc gttccattgc gtggcaggca
     2641 atggagcgca aaaccggcgc gcgcggcctg cgttccatcg tcgaacgctg cctgctcgat
     2701 acgatgtacc gcctgcctga tttgcaaggc ttgaaaaaag tggtggtcgg taaggcagtc
     2761 atcgaagagg gcaaggaacc ggaattggtg ttcgagtcct gatggcaaac aaaaccgctt
     2821 cggaacgttg aaccacgttt ccgaagcggt tttttgtttt tgatgcctag gggcggtttg
     2881 cggcggcaaa ttccgtcagc acgtgttcca aacgccgcaa accttccgcc gtatcctcat
     2941 cgtccaacag cagcgaaggc gcgaaacgca atacgtccgc acccgcaacc aaaatcatca
     3001 cgccgtgttt caaggcggcg gcggttattt cggatgcgcg tccgcgataa ggcgcgtcca
     3061 acacgcagcc gagcagcagc cccatgccgc gaacttgctt aaacacgccc gtttgttctc
     3121 ccaaagaccg caatgccgtc tgaagtttct gcccctgact gcagacgttg tgcaaggttt
     3181 ccggcgcgtt gatgatgtcg aaggcgcggc tgccgaccgc acacgccatc gggttgccgc
     3241 cgaaagtcga gccatgcgtg cccggttgga aggcggcggc aatcgtttct gtcgccagca
     3301 tcgcgccgat cggaaagccg cagcccaagg cttttgccga actcaaaata tcgggaacaa
     3361 cgccgtaatg ttcataggca aacagcctgc ccgtatgccc catcccggtt tgaacttcgt
     3421 ccaaaatcaa caacgcattg tgccggtcgc acagacggcg cgcggtttgc aaatattccg
     3481 cagtggcggg caggatgccg ctttcgccct gtatcggctc gatgatgacc gcgcaggtct
     3541 gttcgccgac ggcagcttcc agcgcggcaa tatcgttgaa cggaacgtgc gtaatgcctt
     3601 gcggcagggg tgcataatcc ttgctgtatt tcggctgacc gccgacggac acggtaaaca
     3661 gcgtgcgtcc gtgaaaactg ttgatacagg cgacgatttc gctttttcct ccgccgaaac
     3721 ggtcgcgggc gtatttcctc gccagcttca acgccgcctc attcgcttcc gagcccgagt
     3781 tgcagaaaaa aaccttgtcg gcaaaactgt ttgcaaccaa tttttgcgcc aattcctgcg
     3841 ctggacgcgt cgtatagata ttggaaatgt gccacagctt gtgcatctgc gcgtttaaag
     3901 catcgacaag ggcagggtgg cagtgtccca gcgcattgac ggcgataccg cctgaaaaat
     3961 caatatattc acgccctttc gtatcccaaa cgcggctgcc tgaagcgcgt tcgggaatca
     4021 tcggggcaaa ggcgaaattg ggggtcagat agttttgcat aattgctcct gattgcggtt
     4081 ttgctcggga ttatgcaccg tttttcaaag cagataaagg gaaattgccg acaatatcgg
     4141 gcagcggtaa aaataaaccg aaatattttc aatcggatag atgaaaaatc aaaaaaattt
     4201 cgataaaatg cttgaggcgc ggcagcgttt tgatttagaa tctccccaat atttttatct
     4261 tcagacggca tttcatcatg caaggcaaaa aatttacaac cgcttattgc tattggtacc
     4321 acacagacgt gcggtacttt tttgcgcttg cttgaaatcc atcccatacg caaaacaggc
     4381 cgctcgaaaa cggggcggct tttttgttac cttcacacag gtcgcccgat tcggcaacac
     4441 acgacagaat caggaaaatg accatgaatg caatgcccca aaccgccgca caaaacgaaa
     4501 ccctgcacac ttgtagcatt attgtcgatg atgcacagga tttttccccc atgcttctcg
     4561 atgcagggcg ggacgacaca cttatcagcg aatcgatgat tccgcaaatc cgcaccgttg
     4621 ccgccctgat agccgccgaa cggcacgact tcagccgcag cagccccgcc gagtttaccg
     4681 atgccgccga tttttttgcc gcacggattc tcgtattggg cgtgcgacgc ttccatctgg
     4741 acgtatcgct gcttcagatt ttgaaaaccg ccaacagccg cgcccgccgc tttgccgaaa
     4801 aacaccgcct gtttttcaca cccgcacaag ccgaattgag cctgaacaaa cacaaaaacc
     4861 gccgcctgct gaccgtagaa accgaacacg aagtcgaaaa caaaggcaac ccagtcgcca
     4921 acagcctcgc atttgtccgc aaattgcacc ccctgcccct gtaaacatca cgatttgccg
     4981 gcagaatgct tgccaaaatt cccgacggcg atacaataaa accgattttc cacccaaaca
     5041 ggacacacat gaaaaaaatc atcgcctccg cgcttatcgc aacattcgca ctcgccgcct
     5101 gccaagacga cacgcaggcg cggctcgaac agcagcagaa acagattgaa gccctgcaac
     5161 agcagctcgc acagcaggca gacgatacgg tttaccaact gactcccgaa gcagtcaaag
     5221 acaccattcc tgccgaagca caggcaaacg gcaacaacgg gcaacccgtt accggtaaag
     5281 acgggcagca gtatatttac gaccaatcga caggaagctg gctgctgcaa agcctggtcg
     5341 gcgcggcggc aggcgcgttt atcggcaacg cgctggcaaa caaattcaca cgggcaggca
     5401 accaagacag tcccgtcgcc cggcgcgcgc gtgcagccta ccatcagtcc gcacgcccca
     5461 atgcgcgcac cagcagggat ttgaacacgc gcagcctccg tgcaaaacaa caggcggcgc
     5521 aggcgcagcg ttaccgcccg acaacgcgcc cgcccgccaa ttaccgccgc cccgctatgc
     5581 gcggtttcgg caggaggcgg taaacccggc gcaccaatgc cgtctgaaga gctttcagac
     5641 ggcatttttg catttgttag ggacattgtt atgttgccgt ttgattttca gacggcattt
     5701 tgtttccaag cgtttgatgt cgggatggca attctgattt acgtgcgttg gcagggcggc
     5761 attgtcatgc cgccgttggg ttttcagacg gcatcatatc gaacagtcaa gccgtagggc
     5821 gagcattctt gcccaccgtt gcaagggcgg gatttggtgg gcaggaatgc ccaccctgca
     5881 tctgaaaccc ttccgtgtca ttcccgtgca ggaaggaatc tagatatttg aatttacgga
     5941 aattttcaat cgttgccaaa gcggaaaagg g
//
LOCUS       DAWEYF010000126         5888 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.126, whole genome shotgun sequence.
ACCESSION   DAWEYF010000126 DAWEYF010000000
VERSION     DAWEYF010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.126"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            131..565
                     /locus_tag="WGN93_001610"
     CDS             131..565
                     /locus_tag="WGN93_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ0227500.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(578..1441)
                     /locus_tag="WGN93_001611"
     CDS             complement(578..1441)
                     /locus_tag="WGN93_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ0227501.1"
                     /translation="MELNEFFDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(1449..2066)
                     /locus_tag="WGN93_001612"
     CDS             complement(1449..2066)
                     /locus_tag="WGN93_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ0227502.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(2229..2843)
                     /locus_tag="WGN93_001613"
     CDS             complement(2229..2843)
                     /locus_tag="WGN93_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEZ0227503.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPDDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQIDLQEG"
     gene            3049..4821
                     /locus_tag="WGN93_001614"
     CDS             3049..4821
                     /locus_tag="WGN93_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ0227504.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAVENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            4818..5474
                     /locus_tag="WGN93_001615"
     CDS             4818..5474
                     /locus_tag="WGN93_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ0227505.1"
                     /translation="MTIKIILIDDHTLFRSGIKSLLSRQHDFEVIGEAADGLSGIKMI
                     NRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDNDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVLE
                     "
BASE COUNT         1453 a         1657 c         1357 g         1421 t
ORIGIN      
        1 ttccgattcc gccgttatgt ctgcctgccg gacatacgta cgcattatta acaaaagtta
       61 accgcgataa taccatcttt cacacgtcaa tctagtatat ttcctaaaat ttccaacaag
      121 aggaaaagcc gtgccactgc ctgctccctg ccgttttgcc aaacctgccg cctctttttt
      181 aagtatggct ttgctttcct gccagctttc ccacgccgcc acggcttata tccccctgaa
      241 cgattttcaa ccgaactgcg acatacgccg gctcggactg acacagggtc agcacaatga
      301 actgcgtaaa atccgcgccg ccttcaaaat ggcgggcgac agggcgcgtt tgaaggttat
      361 gcattccgaa cacagccgcc gccggtctgt cgtcgaaatc atttcttcgg atgtttttaa
      421 tcggaacgag gcgcgcgatt atgtcgaaag ccgctatttg tccggtatgg attttgcggt
      481 ggacgaattg gaaatccaac accgcttctt ccatatcctc acaccgcaac agcagcaaat
      541 gtggctttct tcctgcctca aataatcccc gaaacgctca caacgcccgt tgtttcggca
      601 gcctgcccgc ccagtcgcag gcaaactgcc acgcggaacg tcccgaacgg ctgccccgcg
      661 tctgcgccca ctgcaatgcc gccatctgtg cggtttcatc atacggcacg ccgaaatctt
      721 ccagccaatt ttgcaccgcc gccagataat cgttttgatc gaacggataa aaactgagcc
      781 acaatccgaa tcggtcggac agggatattt tttcttccac cgcttctttc tgatggattt
      841 ccccccgcat ccccgtcgta ccggcattct cgtcaaaata ttcgggcatc aggtgccgtc
      901 tgttggaagt cgcgtaaacc aaaacgttgg cgcaacgttg agacagaccg ccgtctaacg
      961 cggttttcaa tgccttatag gtttcatcgc cgctttcaaa cgacaaatcg tcgcaaaata
     1021 cgataaattt ttccggacgt tccttcaaaa gcgtcaacag gtaaggcagg ccgattaaat
     1081 cgcttttatc gacttcgatc aggcgcaatc ccttatccgc atattcgtgt agcagggctt
     1141 tgaccagcga ggatttgcct gttccgcgcg cgccgctcat caatacattg ttcgcgggtc
     1201 tgccgacaat gaactgttcg gtattacgca ccagcaattc ggtttgcctg ccgactcccg
     1261 ccagccttac caagggaaag gtgtgcggat cgggcaagtg ttccaaaaaa ccttttttgc
     1321 ccgcactctg ccagcggaag gcaagcgcgt tccaatccgt atgcccgggt tcgggcggaa
     1381 gcacggcatc caaacgccgc aaaacggcat aggctttatc gaaaaattcg ttcaattcca
     1441 tctctacctc actttgcata tctttgcgcc atcagccgtt cgacggtgtc gacgattgcc
     1501 tgcgtattcg gatcgatttc gatgttgatc ctgtcgccga cctttctgct gccgaacagc
     1561 gtccgttcca aagtttcggg aatcagatgg acattgaaac ggccgtcttc gactttgcct
     1621 atggtcaggc tgcaaccgtc caagccgacg aaccctttgg tcaggatata gggtttgagt
     1681 tcatgcggga gcgaaaacca aaccgtgcgg ttgaacccgt cccgttcgat ttcgacaata
     1741 ggcacggttg ccataatgtg tccgctcatg acgtgtccgc cgatttcgtc tccgaaacgc
     1801 gccgcccgtt cgatgttgac gcaatcgcct tccttcagca gccccaaatt ggtttttgcc
     1861 aaagtttccg ccattaaatc gaaactgacg cggtttcctt cgatttcggt aatcgtcagg
     1921 cagcagccgt tattggcgac cgatgcgccg cgttgcagat tgtccgccgc ctcttgcgga
     1981 agctcgacga cataagtgtg aaatgcctcc gacgggcggt ggattgccgt cagttttccc
     2041 aatccttgaa caatgcctgt aaacataatc ctgtttccct gtgtcggtaa aaatggtgca
     2101 aattgtagca tctccccgcg aaaaatgccg tctgaaatgc cttcagacag cattatgcct
     2161 ccgattcggg caaaaaccgc ccggtatggc ttgacctttc ctttccacgc cggtcggcgg
     2221 tcttgccctt atccctcctg caaatcgatt tgcgtgttca agtcggcaaa atgcccgtca
     2281 aactcgaatc tgaccgaccg cgccctttgc tgctgcaacc agcttcttaa tgttttcata
     2341 cccgaaaaca gatagggaat cgcgctttgc agaatctgcg ggcggatata cataatgttg
     2401 tagtgcatcg ttatcggcgt ttccacataa tacgcattgc acaacggtgt gcgtttcgac
     2461 acggtttcaa acctcgccac caaatcgtcc ggcagatacg gcatatcgca cggcacaacc
     2521 aaaagccagt cagcagtcgc caactgcaaa tcgttggctg cggtacacaa tgccgaaagc
     2581 gggccgaaat gctgccactg ccgcgcatcg ggaaaaatat gcggacttct tcgagcatat
     2641 tcttccaaat tccggttggt gctgatggcg atatggctga cctgcggcct gaccctgtcg
     2701 atgacatggt ctatcagtgc cttacccccc aaaagagcaa gccccttgtc ctcgcctccc
     2761 atacggctcg cctgaccgtc ggccagtatc agggcaaaag ttttcattgc ggatgttctc
     2821 ttggaaaagt tcgaggtttt catgattgca gtctgccgtt cccaatgact caaaatgccg
     2881 tctgaagcag atggcaaata aattcatatt atctgaattt tatcataaca tgatttaaca
     2941 ctgaagcggt gcggattaag ttttccttaa ccaattcttt ctgagcagtt gtatctaatc
     3001 ccaaagaatg atattgtttg cattatttag aacaattttt cgccgagcat gatactgcca
     3061 gcccgttttt cagacggcat cagcctttcc ctacgcctga aactcctgac cggagtgtgg
     3121 gtcgggttgg cggcattgtc tgtcgttttg acactgctgc tctctttgcg tctggaaaac
     3181 gcggcctccg tcatcgaaga ggcgggcaac ttgagaatgc aggcataccg tctggcatac
     3241 atggcgggtg aaggatctcc ccgctcccaa atagacaatc aggttgacga atttgaaaaa
     3301 agcctgaatc gtatttcaca aagtgatgcc atccatccgc tgattccttc ggacacccct
     3361 cttgcttatg atttgataca atccatgctg attatagatt ggcaggcaca catcctcccc
     3421 ccgctccagt cctaccggcg accgactcag gtcgatctct accgctttgc cggaaacatc
     3481 gaactgtttt tgcaggcatt ggaaaatgcc aacgaaaaaa acacatggtg gctcaggcgt
     3541 tttcaatggg caattatgtt gatgacgctg gtgtcgtctg tactgatgct gttttggcac
     3601 cagatttggg ttatccggcc gctgcaggcg ttaagggaag gtgcggaacg catcggacgg
     3661 aggtgtttcg atattccggt tcccgaaggc ggtacgccgg aattcaaaca ggtcgggcgt
     3721 tgtttcaatc aaatgggcgg caggttgaaa attttatatg atgatttgga aggacaagtc
     3781 gccgagcaga cacgcagtct cgaaaaacaa aatcaaaacc tgaccctgct gtaccaaact
     3841 acacgggacc tgcaccaatc ctacataccg caacaggctg cagaacattt tctaaaccgt
     3901 atcctgcccg ccgtaggagc agattccggc agagtttgtt tggacggcgg atccgatgtt
     3961 tatgtttcca ttcatcatgc ggattgcggc acagcagctt cggatttggg gaagtaccat
     4021 gaggaaatct tccccattga gtaccagaac gaaacattgg gcaggctgtt gctcagcttt
     4081 ccaaacggca tttctcttga tgaagacgac cgcatcctgc ttcaaacact aggcaggcaa
     4141 ttgggcgtat cgcttgccgg cgcaaaacag gaggaagaaa aacgcctgct tgcagtattg
     4201 caggaacgca acctgattgc gcaaggatta catgacagca tcgcacaagc attaacgttc
     4261 ctaaacctac aggtacagat gctggaaacc gcctttgccg aaaacaaacg ggaggaagcc
     4321 gtagaaaaca tcggcttcat caaaacaggc gtgcaggaat gttatgaaga tgtccgcgaa
     4381 ctgctgctca acttccgtac caaaatcagc aataaagaat ttcccgaagc cgttgccgac
     4441 ctattcgccc gctttacgca acaaaccggg ataacggtcg aaaccgcctg ggaaaacggt
     4501 tcgttcctgc cgcctcagga agcgcagctc caaatgattt ttatcctgca ggaaagcctg
     4561 tccaacatcc gcaaacacgc ccgcgccacc catgtaaaat tcaccctttc cgaacacggc
     4621 ggacgcttta ccatgaccat ccaagacaac ggacaaggtt tcgacacgga gaaaatagga
     4681 gaacccacgg gcagccatgt cggactgcac atcatgcagg agcgtgccaa acgcatccat
     4741 gccgttttag aaatccgttc ccaagctcaa cagggaacca ccgtctcatt gacggttgca
     4801 tctgaagaaa gcttgaaatg accattaaaa ttatcctgat agacgaccat accctcttcc
     4861 gcagcggcat taaatccctt ttgtcgcgcc aacatgattt tgaggtcatc ggcgaagccg
     4921 cagacggcct ctcgggcatt aaaatgatca accggctcca acccgatgtc gtcctgcttg
     4981 accttgatat gcccggtatg aacggacgcg aagcactctc ccaaatcatc agcatcaatc
     5041 cgcagcaggc agtgattatg ctgaccgttt ccgaagacaa cgacgacttg accgaatgta
     5101 tgcgcatcgg cgcgcgcggc tacctgctga aaaacatcaa cgccgacttt ctgctcgaaa
     5161 gcatacgcaa agccgccgaa ggcgataatg tattctcgcc cgagatgacc gccaaactcg
     5221 tcaaaagcct gatttccccc caacctgccc aagggacgca ggcactctcc tcacttaccc
     5281 ctcgtgaact ggaaatcttg ggctatctcg ccgcaggaca cagcaacaaa atcatcgccc
     5341 gccacctcga tcttgccgaa tccaccgtca aagtccacgt tcaaaacctg ctccgcaaac
     5401 tcaacctcag cagccgggtg caggccgctg tttacgccat ccggcacaac gtcccccaac
     5461 ccgtgctgga ataaggcggg ttcagacggc atattagggg ttttaatccc cgtacggtca
     5521 ttcggataac agaccaagca tgtaagttta tgcccccata agtacgcttg gcatagcagt
     5581 aatattgttc ggttcagtgt tttccgtttg cccctatctg atactgcaat atcagctatg
     5641 ccgtctgaaa acgcatcatc atgatatttt cagacggcat aataaaaagc ggaaatacta
     5701 atgcagggta aaatgttcca ttccgaatcc cataaatata caatggctta tatcgtttaa
     5761 gcatgtgtaa cccaccctca tatcaatcaa tatatagtgg attaacaaaa accagtacgg
     5821 cgttgcctcg ccttgccgta ctatctgtac tgtctgcggc ttcgtcgcct tgtcctgatt
     5881 tttgttaa
//
LOCUS       DAWEYF010000127         5834 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.127, whole genome shotgun sequence.
ACCESSION   DAWEYF010000127 DAWEYF010000000
VERSION     DAWEYF010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.127"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            11..187
                     /locus_tag="WGN93_001616"
     CDS             11..187
                     /locus_tag="WGN93_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227506.1"
                     /translation="MAHQAPHCVLPERDYPPIRFYRYKQTDFNRKGMGIKSVSDTSRA
                     IPSENQSPLSDGIV"
     gene            264..1211
                     /locus_tag="WGN93_001617"
     CDS             264..1211
                     /locus_tag="WGN93_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ0227507.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAIAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFEHPKVVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAG
                     SMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLTIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1364..2488)
                     /gene="rluD"
                     /locus_tag="WGN93_001618"
     CDS             complement(1364..2488)
                     /gene="rluD"
                     /locus_tag="WGN93_001618"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ0227508.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIIYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVQQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPKTGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2487..3290
                     /locus_tag="WGN93_001619"
     CDS             2487..3290
                     /locus_tag="WGN93_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ0227509.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3348..5567)
                     /locus_tag="WGN93_001620"
     CDS             complement(3348..5567)
                     /locus_tag="WGN93_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ0227510.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWILTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPSVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1421 a         1833 c         1406 g         1174 t
ORIGIN      
        1 tcaacagggg atggcacatc aagcaccgca ctgcgtgttg cccgaacgag actaccctcc
       61 gattagattc tatcgctata aacagacgga tttcaaccgg aaaggaatgg ggataaagtc
      121 cgtttccgac acctctcggg cgataccgtc tgaaaaccaa tctccacttt cagacggcat
      181 tgtttaggca cggtcatttt gcaaattaag gttaaggcgt gtatgcttgc cttcccttaa
      241 aaacaaacac gcaacgcatt attatgaata tcctcagtaa aatcagcagc tttatcggaa
      301 aaacattttc cctctgggcc gcgctctttg ccgccatcgc ttttttcgcg cccgacacct
      361 tcaaatgggc ggggccttat attccttggc tgttgggcat tattatgttc ggtatgggtt
      421 tgacgctcaa accttccgac ttcgatattt tgttcgaaca tcccaaagtc gtcatcatcg
      481 gcgtaatcgc acaattcgcc attatgccgg caaccgcctg gctgctgtcc aaactgttga
      541 acctgcctgc cgaaatcgcg gtcggcgtga ttttggtcgg ctgctgcccg ggcggtacgg
      601 cttccaatgt gatgacctat ctggcgcgcg gcaatgtggc tttgtcggtt gccgttacgt
      661 ctgtttccac cctgatttcc ccattgctga ctcccgccat cttcctgatg cttgccggtg
      721 aaatgctgga aatccaagcg ggcagtatgt tgatgtccat cgtcaaaatg gttttgctcc
      781 ccattgtttt gggtttgatt gtccataagg ttttgggcag taaaaccgaa aagctgaccg
      841 atgcgctgcc gctggtttcc gttgccgcca tcgtgctgat tatcggcgcg gttgttgggg
      901 caagcaaagg caagattatg gaaagcggcc tgctgatttt tgcggttgtc gtactccaca
      961 acggcatcgg ctacctgctc ggcttctttg ccgccaaatg gaccggcctg ccttatgatg
     1021 cacaaaaaac gctgaccatc gaagtcggta tgcaaaactc gggcctggcc gccgcgcttg
     1081 ccgccgcaca ctttgccgcc gcgccggtcg ttgccgttcc gggcgcattg ttcagcgtgt
     1141 ggcacaatat ctccggctcg ctgctggcaa cttattgggc ggccaaagcc ggtaaacata
     1201 aaaaacccta aacgcctttc atcataatgc cgtctgaacg gggcaaacaa aactggcggt
     1261 ttctgcccgg ccccttcaga cggcctttgt ttgaaatcgg cggggacgat tgcccggctg
     1321 ctccgattcg gctgcctgcg ttcgccccgc ctttcaagcc gcctcactcc cttacataaa
     1381 ccacttcgac atcgtagtcg tcttcgttcc aatcgtcatc gtcgtccgcg ccgaatttgt
     1441 cctgccattc ctcttcattg ctcaaagacg aatccaaacc ggcttcaaga cggaggacag
     1501 acaacaaatg atatatgtcg tccggaatcg gtgcttcaaa cgaaacggtt tcgccggttt
     1561 tcggatgagt gaaacttaag cggtaggcgt gcaatgcctg acgcgcaccc aaacttttaa
     1621 cggcttcttt caccgtgtcg ccgcacggat ggcgcgggtt gccgtaaacc gggtcggcgg
     1681 caagcggatg gttggcctca cgcatatgga cgcggatttg gtgcgtcctg cctgtttcga
     1741 gcgagcattc gatatagctg tgcgccagat agcgttccaa cactttgacg tgggtaacgg
     1801 ctggtttgcc gccgaatttg acgactgcca ttttcaggcg gttgtgcgga tcgcgtccga
     1861 tttgggtttc gattttaccg tcaaagggaa cgatgccgtt ggcgacggcg cggtaaatgc
     1921 gtttgaccgt gcgctcttga agctgttgca cgagggaatt ttgcgccggc agggttttgg
     1981 caaccaccat cagcccgctg gtttctttgt ccaaacggtg tacgatgcct gcacgaggta
     2041 cttggctcaa ttcgggacag tgcgccaaca ggccgttgag cagcgtcccc gtccagttgc
     2101 ccgccgccgg atgcaccacc agtccggccg gtttgttgac gacgatgacg gtatcgtctt
     2161 cgtaaataat atccaaagcc ataggctctg gaacaaacgc cagattttcc tcactcggac
     2221 ggacggttac acaaatttgc tcgccgccta tcattttgtc tttgggttgc gaaggtttat
     2281 cgtttacaat aaccgcgcct tctttaatcc atgatgtcag gcggctgcgc gagtagtcgg
     2341 gcagaagttt cgccaacacc gcatccaacc gcccgccggc aagctcgagc ggaacggtca
     2401 gaccgatacg gttttcagtt tcggaagctg acgcaaagtc tgaatcgtcg ctataatcgg
     2461 attcattatc aaaggaagta ttctgcatga aaaaaattct tttaacggtt tcattaggtt
     2521 tggcactgag tgcctgtgcc actcaaggta cggtcgataa agatgctcag attacccaag
     2581 attggagtgt ggagaagctc tatgccgaag cccaggacga attgaacagc agcaattata
     2641 cgcgggctgt caagttatac gaaatcttgg aatcgcgctt ccccaccagc cgccatgccc
     2701 ggcaatccca actggatacc gcatacgcct attataaaga cgatgaaaaa gacaaggctc
     2761 tggcggcaat cgaacgcttc cgccgcctcc atccgcagca tccgaatatg gattacgcgc
     2821 tgtatctgcg cggcttggtg ctgttcaacg aagaccagtc cttcttgaac aaactggcct
     2881 cgcaagactg gtccgaccgc gacccgaaag ccaaccgcga agcgtatcag gcctttgcgg
     2941 aactcgtcca acgcttcccg aacagcaaat acgccgccga tgcaaccgca cgcatggtca
     3001 aactggtcga tgcactgggc ggcaatgaaa tgtcggtggc gcgttactac atgaaacgcg
     3061 gcgcatatat cgccgccgcc aaccgcgccc aaaaaattat cggcagctat caaaatacac
     3121 gctatgtcga agaatcactc gccatattgg aacttgccta ccaaaaactc ggcaaaccgc
     3181 agcttgccgc cgatacgcgc cgcgtgttgg aaaccaactt cccgaaaagc ccgtttttga
     3241 cgcacgcctg gcagcccgac gatatgccct ggtggcgtta ctggcattaa gcccatcttc
     3301 gtaatgccgt ctgaagccgt ttcagacggc attttatgtt tcaaacctca ttcaaacggt
     3361 tttttctgcc aatagaattt ataccctctc aaacgttgag ccttcacgcc gccgcgtccc
     3421 aagccgaatt gcagtgcgcc cgacaaatcg gtacgcagca gtttgatgcc gtgtgcgcgg
     3481 acacggttct gcaccgcttc ggtcggatgt ttgtaggcgt tggcataacc gcttgaagca
     3541 acggcatatt cgggcgagac ggcattgagg aacacgcccg acgaggacgt attgctgccg
     3601 tgatgtccca aaaccaaaac ctggctgtac aggttgcctc catacttgcc gaccaggctt
     3661 tcctcgccct tcgtatccaa atcgcccgtt accagcagtg ccgcaccgcc cgccacaaca
     3721 cgcaaaacac aacttttccc attatcatcg atgtttttgc gttcagacgg catcaaaaac
     3781 tcaaaatcca cgccgtccca ttgccaacgc tgttccgcac aatgccgcgc cccctcataa
     3841 aattccggct gcccggcata aatcccgccg ttcggtatct tgccgactgc ctgaaaaccg
     3901 ccgtcgtggt cgctgtcgtg atgcgacaga accagcttgt ccaaacggcg gacacccgcc
     3961 gcattcaaac tcggcacaat ccccatctgc gccgccgctg ccgttccggt gtcaaacaaa
     4021 agatgatgat ttgccgtctg aaccgacacc gacaaaccct gccccgcatc ccaaaccgta
     4081 accgcaacct cattttccgg cacgctgggt gaacggtaaa acacaaaccc tgccaacagc
     4141 aacaccgccc acggacgcaa acccaagccg cgcggcagca gcaacagcaa agcggcacac
     4201 accgccaaca ccaacagcgg caaaggtgcg gaggcaacgg caaactcggg cgacacatcg
     4261 gcaagccaca ccaaaaaccg caaagtatat tccgccaaaa atgcccccaa ctgttgcaaa
     4321 ggcgcaaacg gcacgaccga acccagcaac gccagcggcg tcaatatcca agaaaaccac
     4381 ggaattgcca ccgcattgac caaagggctg attaaaggca gcgaagcaaa cagataaccg
     4441 agcaaaacca gcgacaacac cgaagccgcc cactgcccgc gcaaagcagt ttgccgtttt
     4501 ccctcgtgca aacgccccga gcacgcccat atcagggccg ccaccaaacc gaaagacagc
     4561 caagtcccca cacccaagac cgccgacggg tcgaacagca gcaccgccgc caacgcctgc
     4621 caccacgtcg cccacgccga caatcttccc ctgcgccaag cccacgcaaa cgccgccaac
     4681 atcaaaacgc tgcgctgcgt cggcacggaa aaaccggcaa gcagcgcgta aaacagcgcg
     4741 cctgcacacc ccgccgccaa aacccacgcg cgcggccggg caggaaggcg cggggaacag
     4801 gcaagcagcc gcttcgccag ccacgcaaac attaccgcca ccatcgtaac gtgcaaaccc
     4861 gaaatactga ccaaatgcgt cagccccaac ggccggaacg cctgccacaa ttcggggcgc
     4921 aatgccgact gttcgcccac gctcaacgcg cgcatcagcc cgatgccgtc tgaaagcccg
     4981 ccgtccgcat ccgcctgctg ccaattacgg ctgatgcggc tgcgccaaac cgcaatcccc
     5041 caaccgcttc cgccatgcag caaaaccctg tccgcaccga ccgtccccgc gccgcctatt
     5101 ccattggata atgcccacgc ctcacggttc aaaccgcgca ggttcaactc cccgacgaca
     5161 gggtgcacac gtgccgttat ccgccatctg ctcccgaccg cccattcgcg ccgtttgtag
     5221 tccgacagca gcaaatcaaa cgtccgacca ccgctgtcca cagcctttgc cgcaaactgc
     5281 acacgccgcc cgtccgacct cggcatatcc gccacttcca ccgtcaaagg cacgcctgaa
     5341 acggcttctg cccaccattg ggaagacaat gccgcctccg tcctgaatac gccgtaagcc
     5401 gcgcccgcca acacgcacag catcagaccg gcaaacgcaa aacgccttgc aaacacagca
     5461 aaaaccgcaa aagccgccag ccaaaacagc caatgcggca cgaccggcag cgcgaacgaa
     5521 gccgccgcac cgacaaccca acacggcaaa aaccaacgac ggaacacgtc tccccacccc
     5581 agatatttca aaaataaacg gataataaag caaatccgaa aaaccgtcat aacaagattt
     5641 gaaaatgata tagtggttta aatttaaatc aggacaaggc gacgaagccg cagacagtac
     5701 aagcagtacg acaaggcgag gcaacgctgt actggttttt gttaaaccac tataagaatg
     5761 caaacgaaaa gcctcagtat tatccgagac aacggcaaac tttccatcgt cattcccacg
     5821 aacccacatc ccgt
//
LOCUS       DAWEYF010000128         5735 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.128, whole genome shotgun sequence.
ACCESSION   DAWEYF010000128 DAWEYF010000000
VERSION     DAWEYF010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5735
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.128"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(83..1129)
                     /gene="recA"
                     /locus_tag="WGN93_001621"
     CDS             complement(83..1129)
                     /gene="recA"
                     /locus_tag="WGN93_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ0227511.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGIEMHIT
                     EGTQDETDGERPEE"
     gene            1383..2147
                     /locus_tag="WGN93_001622"
     CDS             1383..2147
                     /locus_tag="WGN93_001622"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ0227512.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEILHHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFKLL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2167..4182
                     /gene="rep"
                     /locus_tag="WGN93_001623"
     CDS             2167..4182
                     /gene="rep"
                     /locus_tag="WGN93_001623"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ0227513.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVSDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(4250..5308)
                     /gene="dinB"
                     /locus_tag="WGN93_001624"
     CDS             complement(4250..5308)
                     /gene="dinB"
                     /locus_tag="WGN93_001624"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ0227514.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLIARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT         1411 a         1507 c         1536 g         1281 t
ORIGIN      
        1 aaactcaaat caagccgttc ggaggctgct caaaaaaaac ggtacttcgc aacagaagta
       61 ccgtttatcg ggatttcagg ttttattctt cggggcgttc gccgtcggtt tcgtcctgcg
      121 tcccttcggt gatgtgcatt tctatgccgt tgagggcgcg gatttttgcg tcgatttcgt
      181 cggcaatttc gggattttcc ttcagccaga cgcggacgtt gtctttgccc tgaccgattt
      241 tcgcgccgtt gtagctgtac cacgcgccgg atttgttgat gatgtcgttt ttcacgccga
      301 tgtcgatcaa ttcgccttcc caactgatgc cttctccgta gaggatgtca aactctgcct
      361 gacggaacgg cggcgcgact ttgtttttga tgactttgac gcgggtttcg ttgcccaata
      421 cttcttcacc ttttttgatg gatccggtgc ggcggatgtc gaggcggacg gaagaataga
      481 atttcagcgc gttgccgccg gtcgtggtct cggggctgcc gaacattacg ccgatcttca
      541 tccggatttg gttgatgaac acaaccagcg tgttggtttt tttgatgtgt ccggtcagtt
      601 tgcgcaaagc ctggctcatc aggcgcgcct gcagtccgac atggctgtcc cccatatcgc
      661 cttcgatttc ggctttgggg acgagtgcgg ctacggaatc gacgactacc atatctatgc
      721 cgcccgaacg gacgagtgtg tcgcagattt ccaaagcctg ttcgccggta tcgggctggg
      781 acaggtaaag ctcttcgact tttacgccga gtttgcgggc gtaaacggga tcgaaggcgt
      841 gttcggcatc gacaaaggcg cacacgccgc cgtttttctg gcattgggcg acggcttcga
      901 ggcagagggt ggttttgccg gaggattctg ggccgaagat ttcgacgatg cgcccgcgcg
      961 gcagaccgcc gactccgagg gcgaggtcta atccgagcga tccggtggaa atgacttcga
     1021 ggttttcttc ctgctggctg ccgtccattt tcatgatggc gcctttgccg aaactttttt
     1081 cgatttgcgc cagtgcggcg gcaagtgctt tgcttttgtc gtctgacatt ggggttactc
     1141 cggaacaaat gcggtatgtg ggatgcggcg caacacgggc tgcggcgcgg gatgtgtatc
     1201 gttttcccga tgtgcgggct atcggtaatg ctgcttcacg aggttgccat tatcgcatat
     1261 ttccttgctt gccgatatgc gccaggacgc ggcggcttgt gccggaatgg aatctggatg
     1321 ccgtctaaaa ggcggccggc tttgttataa tggcggctgt tttttctgtg tgtgcctgtt
     1381 ttatgtgttc ctgccttgtt gtcaaaaata ccgttatcgg aagcggacgc accaaaatcg
     1441 ccgtgccgct tgtcgcccgc gatgccgccg aactttccgc cgtacttgag caaatcaaaa
     1501 atatgccctt cgatattgcg gagttccgcg ccgacttttt ggaatgcgcg ggcagtatcg
     1561 gcgaaatatt gcaccacacg cagaccgtcc gcgacgcgct gcccgacaag ccgctgctgt
     1621 ttacgttcag acggcatggc gaaggcggct cgttcccgtg ttcggacgat tattatttta
     1681 aactgctcga cgcgctgatc gaaagtcgcc tgcccgacat tatcgatatc gagctgtttt
     1741 ccggcgaaac cgccgtccgg cgcgctgtgg cgaatgctca aaaaaacggc atcgccgccc
     1801 tgctctgcaa tcatgagttt caccgcacgc cgccgcaaga agaaatcgta tgccgtctga
     1861 aacagatgga ggactgcggc gcggacatct gcaaaattgc ggtgatgccg caaagcgcgg
     1921 aagatgtgct gactttgctt tccgccacgc tcaaagcgaa agagcttgcc gccaaaccga
     1981 ttgttacgat gtcgatgggg cagacggggg cggtcagccg gcttgccgga caggtgttcg
     2041 gctcaagcat cacgttcggt tcgggaacgc aaaactccgc gccggggcaa atcggcgtat
     2101 ccgccctccg tgcgacactc gactgcctcg aaaacggcgc agactgattt cagacagcat
     2161 caaaacatga tgaaactcaa tccccaacag ctcgaagccg tccgctacct cggcggccca
     2221 ctgctcgtcc ttgccggtgc aggcagcggc aaaaccggcg tgattactca aaaaatcaag
     2281 tatttgattg tcaatgtcgg ctatctgccg cataccgttg ccgcgattac ctttaccaat
     2341 aaagccgccg cggaaatgca ggagcgcgtc gccaaaatgc tgcacaaatc gcaaacgcgc
     2401 gggctgacga tttgcacgtt ccactctttg ggcatgaaga ttctgcgcga agaggcgaac
     2461 catatcggtt acaaaaaaaa cttctccatt ctcgattcta ccgacagcgc gaaaatcatc
     2521 ggcgaactct taggcggtac gggcaaagaa gccgtattca aggcgcagca ccagatttcc
     2581 ttgtggaaaa acgatttaaa aacgcctgaa gatgtcgttc agacggcatc gaacatttgg
     2641 gaacaacaaa ccgcacgcgt gtatgcgagc tatcaggaaa ccttacaaag ctatcaggca
     2701 gtggacttcg acgacttgat ccgcctgcct gccgtgctgt tgcagcaaaa cagcgaagtg
     2761 cgcaacaaat ggcagcggcg gctgcgttat ctgctggttg acgaatgcca agatacgaat
     2821 acctgccaat ttacgttgat gaaacttctg accggcgcgg aaggtatgtt taccgccgtc
     2881 ggcgacgacg accagtccat ctacgcatgg cgcggcgcga acatggaaaa cctgcgcaaa
     2941 atgcaggaaa actatccgca gatgaaggtc atcaaactgg agcaaaacta ccgctccacc
     3001 gcgcggattc tcaaaatcgc caacaaagtc atcgagaaca accccaagct gttcaccaaa
     3061 aaactttggt cgaaattggg cgaaggcgag cccgtcaaag tcgttgcctg ccaaaacgag
     3121 cagcacgaag ccgactgggt cgtcagccaa atcgtcaaac aaaaactcat cggcggcgac
     3181 aaaacccaat atgccgattt cgccgtgttg taccgcggaa agcatcaggc gaggattttc
     3241 gaggaagcat tgcgcggcgc gcgcatcccc taccgtctct ccggcggaca aagctttttc
     3301 gacaaagccg aaatcaaaga cgtgttgtct tatgtgcggc tgcttgccaa ccccaatgac
     3361 gatcccgcct ttctgcgtgc cgttaccacg cccaaacgcg gcatcggcga tgtcacgctg
     3421 ggcaagctca acacttacgc gcacgaacac gaatgcagcc tgtatgaagc cgcacaaaac
     3481 gaagaagccc ttgccacgct gaacaatacc aaccgccaac acctgcaagc ctttatggat
     3541 atgttcggca gctaccgcgc caaagcggaa accggcgaag caggcgagtt catcaacagc
     3601 ctgctcgaag aaatcgacta tgaaaaccat ttgatgcaaa acgaagaagg caaggccggc
     3661 gaaatcaaat ggcgcaatgt cagcgatttg gtatcatggt ttgcgcgaaa aggcggggaa
     3721 gacggcaaaa acatcatcga actcgcccaa accgtcgcct tgatgacgct tttggaagga
     3781 aaagacgaag aagaaaccga tgccgtctcg ctatccacgc tacacgccgc caaaggtttg
     3841 gagtatccgt atgttttcct tgtcggttgc gaagaaggcg ttttgccgca caacgacagt
     3901 atcgaagagg gcaacgtcga agaagaacgc cgcctgatgt acgtcggcat cacccgcgcc
     3961 aaacgccaac tcacgctgac ccactgcgtc aaacgcaaaa aacaaggcat atggcagttc
     4021 cccgaaccca gccgattcat agacgaaatg ccgcaggaag atttgaaaat cctggggcgc
     4081 aaaggcggcg aaccgattgt cagcaaggaa gaaggcaggc gcaaccttgc cgatataatc
     4141 ggaaggctcg acaacctaaa aaaaagcggc gcggcggatt aaaccggagc cgcaatgccg
     4201 tctgaaggct tcagacggca tattttttgg acggcgcgcg taaagcggtt tacgcccaca
     4261 aatcctgctg ctggtttttc ggcacaagat gccccacgcc gataccgata aggcggaacg
     4321 cgtcttccgt ctgcggcggg acgcgcgcta tcaacatttg cgcagcctgc agcagagctg
     4381 cgcagtcggg caatacggag gaataagtca gtgtgcgcgt gatgatgcgg aaatcgtagg
     4441 tcttcagctt gagcgttacg ctttgggctt cgacgttttt gcgcgtgatt tgccgccaca
     4501 ggtcttcagc aagatggggc aggtgtccgg cagcctgctc gagcggcagg tcttcaggca
     4561 gggtgatttc tgtggagatt tggaggcgtt cgcgttcggc tttgacgggg cgttcatccg
     4621 taccgcgcac caaatcatag aggcggtatc cgtagcgtcc gaaatggttt aagagctcgc
     4681 cgcgctcgaa acggcgcaag tcgcccgccg tccgcatacc cagcgactgc atttttttca
     4741 gcgtaacctt gcccacgccg gggattttgc ccaaaggcag ggtttccaaa aatgccatga
     4801 ctttgtgcgg cggcaacaca aactgcccgt tcggcttgcg ccagtccgac gcgattttcg
     4861 ccagaaattt gttcggcgcg atgcctgcgg atgcagtcaa acctgtttcc gcaaaaatgg
     4921 cggcacggat ttctttggca acttcactgg cgtaagggat gtttttgaaa ttacgggtaa
     4981 cgtcaagata ggcttcgtcc agcgacaagg gttcgattaa atcggtataa cgcctgaata
     5041 cggcgtgaat ctgcgcggaa acctgacggt acaaatcgaa atgcggcggc acatacaccg
     5101 cttgcggaca cagccttttc gccgttgcca ccgacatcgc ggaatgcagc ccgaactgcc
     5161 gtgcctcata cgatgcggcg caaatcaccg aacgcgcgcc ctcccacgcg acgaccaccg
     5221 gccgcccttt caaatgcggc tgttcgcgca gctctaccga tgcgtagaac gcgtccatgt
     5281 cgatgtggat gattttgcgt gaagacatcg gctctgctga ggataaaagg gatattctac
     5341 tgccggcatc gggcaaattc caaatatact aacaggttaa atacaaaaaa gttggctgga
     5401 ttaattttgg aagcttataa aaataatggt ttttatcaag cagaaagaaa cagcaatgga
     5461 aattatgata tcgtaagaaa aaaattatct gaaaaaagat taccaaaata caagcaatat
     5521 attaatttac tcagataata atagtgactg atttaaaatt cagcagcgta gaaaacaaat
     5581 cagagcacaa atttcagcca gacaatggag aagataaaag atgaataaaa atatacttta
     5641 tatattttct ttattaatcg ctattgttat ttcttttata tttgaaaaga atgtaataag
     5701 caaaataagt tttaattata ataaaaaaga attct
//
LOCUS       DAWEYF010000129         5694 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.129, whole genome shotgun sequence.
ACCESSION   DAWEYF010000129 DAWEYF010000000
VERSION     DAWEYF010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5694
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.129"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(197..409)
                     /locus_tag="WGN93_001625"
     CDS             complement(197..409)
                     /locus_tag="WGN93_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0227515.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(421..702)
                     /locus_tag="WGN93_001626"
     CDS             complement(421..702)
                     /locus_tag="WGN93_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227516.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(740..943)
                     /locus_tag="WGN93_001627"
     CDS             complement(740..943)
                     /locus_tag="WGN93_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227517.1"
                     /translation="MNIIEQEMKHSSLRKVDVEIAKIIADAHKINAESVKIAQESRWY
                     PMMAATGLVTAIAAVLALIFKFA"
     gene            complement(1023..1595)
                     /locus_tag="WGN93_001628"
     CDS             complement(1023..1595)
                     /locus_tag="WGN93_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEZ0227518.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            1574..1885
                     /locus_tag="WGN93_001629"
     CDS             1574..1885
                     /locus_tag="WGN93_001629"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227519.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSVLSSVLPASLRRLRVGLMLTASSLRYSVARLMPNSCACCLRYAERAPRPIAS
                     A"
     gene            complement(1907..2782)
                     /locus_tag="WGN93_001630"
     CDS             complement(1907..2782)
                     /locus_tag="WGN93_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ0227520.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELTEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHEISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2827..3117)
                     /locus_tag="WGN93_001631"
     CDS             complement(2827..3117)
                     /locus_tag="WGN93_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ0227521.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3129..3308)
                     /locus_tag="WGN93_001632"
     CDS             complement(3129..3308)
                     /locus_tag="WGN93_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001510316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ0227522.1"
                     /translation="MYGYTVEKLKENFAQNGQTLAQWARENGFKPRDVYLVVGGQRKG
                     NYGKGHEIAKKLGLK"
     gene            3422..3799
                     /locus_tag="WGN93_001633"
     CDS             3422..3799
                     /locus_tag="WGN93_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0227523.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            3828..4073
                     /locus_tag="WGN93_001634"
     CDS             3828..4073
                     /locus_tag="WGN93_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227524.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            4307..5275
                     /locus_tag="WGN93_001635"
     CDS             4307..5275
                     /locus_tag="WGN93_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227525.1"
                     /translation="MAKKTTKTIHYLRAQQNHSLFDLEVALRRVLSAAPTVQDTQIEQ
                     YNQLTQIMHRTLDPKDVKGNSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPP
                     SGYSFLRKEAFLYIVGHHVIFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFK
                     AVGNCDKLSLIQQHGVKSILLDASAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSD
                     EELEAQSEIHINLEVLLNGNSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVI
                     QPSDVKLSKSVRIGRYDEANSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            5272..>5694
                     /locus_tag="WGN93_001636"
     CDS             5272..>5694
                     /locus_tag="WGN93_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227526.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNL"
BASE COUNT         1342 a         1290 c         1427 g         1635 t
ORIGIN      
        1 gcgaaaacag ctgaaaacct gtgtttgggt ttcggctgtc gggagggaaa ggaattttgc
       61 aaaggtctca gagtgagttt attttggggc ggcggcaggt cgggggcaag cggcgtgggg
      121 cttggttgtg gtttttaggt ttgggggtgg gtaaaaaatg ccgtacccgg cgggcaggct
      181 tcgcactctg aaggtttcag acggcgtttg ttttttctgt ccaatcgagg aactgccgcc
      241 atttttccag cggcatatcg gcccgccgcg tttcggtatc gggttcggct tcccagcggc
      301 ctacctgtat gtagtgcttc accccgacga tttgcgccaa ctcggcctgt gtcagtttgc
      361 agcggttgcg cagggtgcga aggttgtaag gcgtgtagcc gagttccatg tcgttgcggt
      421 ttattttgtt tcgcatattt ttttgactgc ccggcggcag gtttcggtaa ggacggcggc
      481 aaatcgggct tcgtctgccg gttttccgtc gaaaaaaata aaatcgtaaa gggtgatgcc
      541 gttttcggaa tggcggtaat gcccgcccgg gcattcgccg tctgtctgcc tgtggatttt
      601 ggcaatcagg cggggatagc ggcaatgggt aatgaaacgg cttgcgccgt cttgcccgat
      661 aatccattcg gggtagcggt tgaatagtgc ggctctgttc attttgttcg ggggataaag
      721 cccctcgcgg ggcttgtggt caggcaaatt tgaatatcag tgccaacacg gcggcgatgg
      781 cggtaaccag cccggtggcc gccatcatgg gataccatcg ggattcttgg gctattttta
      841 cggattcggc gttgattttg tgcgcgtctg caatgatttt ggcgatttcg acatctactt
      901 ttctcagact ggagtgtttc atttcttgtt cgattatgtt catcgtactt cctttcgttt
      961 ttggcggttg ccgccgcttg tcggatggca ggatgtctgc catgtgtata tattgatacc
     1021 ttttaggttt tattgcaagt gttttgggcg gcggcttcgt atgcttggcg gtggcggcgg
     1081 ctgtaccatt cggcgagttc gcgccgctct tggaggcggt agctgtcggc ggtcaggtag
     1141 tggtgcaggc ttgagaagcc ggcgcgttgg agggcggcgc ggctgatgtg gccgagggcg
     1201 aggtctgttg tgagggtgtc ttttccggcg gtcaggctga tgttggtgaa gaggtggcgg
     1261 aatccgtgca ttgtgtgttt ggatttgccg ggggtgctgc cgtcatagcc cagtcgtcgg
     1321 atggcgttgt gggcgaattt gatgctgatg tggtcgggat ggggggcggg tttgcgccgt
     1381 gggcggatgc cggggaaaag gtggatgttg tcgccggtct gtgtgtgcag ctctcggagt
     1441 atttctaccg cccagtccga cagtgggacg gtaaaggggt gtttggtctt catgtcggcg
     1501 gcggggatgt gccataaccg ggcggtgagg tcgatgtctt gccagcgggc ggaaagcagt
     1561 gcggacggac gggatgactt ccccggtttc cccatcaatc cgcgccgcct cgatttttcc
     1621 gttggcgcgc agcatttcca ccgcctgccg caccgacatc aaccgcttgc cgttgcgcct
     1681 catcgcctcc accaaaaccg ccgaaatcaa tttggcttct tccgttttaa gctccgtctt
     1741 gcccgcatcg ctgcgccgtt tgcgcgtcgg cttgatgctg accgcctcca gcttgcggta
     1801 tagcgtggca aggctgatgc ccaattcctg cgcctgctgc ttaagatatg cagagcgtgc
     1861 gccgcgtccc attgcttccg cctgattctc gactgcctta agacgctcaa tcattgccgg
     1921 attcatcgcc ttctcccgtt tcaccgccca accattccgg cacattgtct gtcggtgctt
     1981 cagtcggcag ggcatagctt tcgcgcagtt gctcgcagtc caaaataatt tgattgagcg
     2041 tgccgaccat ctttgcctga tggctgatct cgtgtgcctc actgtgcgca ttaagttggt
     2101 cgaacaaatc tttcaaacgg ctcacttgac tgcggatacc gacctcaagg cttgttaact
     2161 gcatcgccaa ctcactgccc acgtcttccg ccttcggctc tctgacaacg gtttgcttct
     2221 tagccagctt ctcggtcagc tcatcaattt tggctgtttt ggttttcatc acttcgtctt
     2281 tggcggcgag gttttcacgg ctttcgcgca gggcgacgcg cagctcgcgc accgtcattc
     2341 ggtccacatc gtcaaaggtc atgccgttga cttcttctcc ttcggcaagt cccaccaacg
     2401 taacgtcttc ttcgaccagc agctcaagca gcttcgactt gcccaaatcc atcagcttcg
     2461 gcgcggcttt ctgcatttgc ggggtcgcaa agcggcgagt ggctgacatc agacgtgatg
     2521 tttctgcgat acccagccca aattggcttt tcacaatttc cataaaccgt ccgtgttccg
     2581 tatgctcttt taaaataatc agcgcacgtc ccagttcgaa catgccttcc atcgtctgcc
     2641 gtactgcttg acgaccgcgt tcaacccaac gctcttcgct ataagtctcg ccgttacccc
     2701 actgctccat caccagcaca ctgcgcatcg ctgcctgatt gcttactttg tcggttgcga
     2761 taatttcaat ttctgtattc attttttatc tccaaagttt ccgacgtcgg aaactttcaa
     2821 aatccgttaa tccacatcga cccgcttgcc gatttcggca atcttgcttt gcagccgttc
     2881 atgctgctgc ctgaaccgct cggcgatttg cagggttttg atgccgtagg cgtagttgcc
     2941 gttttcaagt ttgatgacca atcccgaggc aaccaaatca tcaatatccc tgctgacttg
     3001 cgatggcgtc agccccagtc cgaccgataa atccttattg ctcagaccga taatcggatg
     3061 ctcgtcaagc gcgataaaga ccctcaatag ccgttgtacc cttttacttt ctgccatccg
     3121 catcctcctt atttcagtcc cagcttcttg gcaatttcat gccccttgcc gtaattgcct
     3181 ttgcgctgtc cgccgaccac cagatacaca tcgcgcggct taaagccgtt ctctcttgcc
     3241 cactgcgcca gcgtttggcc gttttgggca aaattttctt ttagtttttc aacagtatag
     3301 ccatagatag ccctttccca ttgtgataaa atagtgaact atttatgcac tagaaattaa
     3361 ttagtgcatt accaatgcgt gaattatgag attttaaaat ctcttttaca aggattattt
     3421 tgtgatttct aaatctcttt ttggtaatcg tttgaaagaa aaaagaaagt ttttagggct
     3481 tacccaagca caagctgctg aaaaagcagg tattgagcgc gaaacatggg gcaaatacga
     3541 acgtggcgta tttatgccta gtggagatgt attgctctct tttttgaata tgggaataga
     3601 tgtgagcagc ttatttgctg ctgaacaggg aattaggccg tctgaaaatt ctgaaattag
     3661 taaggaagag tcagagttat tagggtatta ccgccaagcc agcgataacg gcaaatttgt
     3721 cattctcagt gtggcaaaag gcgcagagaa aaaagcagcc gaaaatactc aagtttcagc
     3781 cacgcataaa acagcgtgat ttttaaatcc aaaatggaga cagtcttatg tttgactttg
     3841 aacaacaaat caaatggggt gagcgagcgg aagaaatcgt taaagaggca gccacccaga
     3901 acaatatcga aattcccgaa cctttggctt cggcattagc taaggcggta aaagtgcatt
     3961 atctaagcca agctggtgtg ttttctttgg tagaagccta tgcagacacg gtaaatccaa
     4021 ctgaaaaaga agtagattac caagcaatcg gcaaagagct atttgaaaaa taaaaaatgc
     4081 cgtctgaaat tttcagacgg catttaggac actccgacag tcgggctgct ccggtgttct
     4141 gaaacggata ttaagcaatt gaagcggccg tgcattttaa aacgcattaa aaactacccc
     4201 gacatacagg tcatcgggca ggtggttcag gtgttgaaag atttgaattg atgccgtctg
     4261 aatttatttt ttcgacacag atattaaaag agaaaggact gtacaaatgg caaaaaaaac
     4321 tactaaaact attcattatt tacgtgcgca gcaaaaccat agcttgttcg atttagaggt
     4381 agcattaaga agggttttgt cagctgctcc tactgttcaa gatacacaaa ttgaacaata
     4441 caatcagctt acccaaatca tgcatagaac tttggatcct aaagatgtaa aaggcaattc
     4501 aattggtgga ttactgatac acattggcag cggtacaaaa gatgaacata tccgcactat
     4561 gagcaataga cctgtacagc aagatgatca tggtggaaca caagctcctc caagtggata
     4621 ttcctttttg cgtaaagagg cttttttgta tattgttgga caccatgtaa ttttttgcgg
     4681 acatggtttt ttgtcagcat caacggttgc ttcttattta agtttactta gcaataaatt
     4741 gagagagaac aatccggata ttgttcaatt taatattgaa ttcaaagcag taggcaattg
     4801 cgacaagttg tcattgatac aacaacatgg ggtaaaaagt attcttttag atgcttcggc
     4861 atatcaatta tccagaaaca gactgtatca agatagccgt tcaaccattg ctaaagcatt
     4921 agggaaagtt ggtagtgtat ttacaagcga attgagtgat gaggaattgg aagcacaatc
     4981 cgaaattcat atcaatttag aagtcttgct aaacggtaat tcgagagcca gtattgaagc
     5041 gcaatcgctg atgcaggagc aggcagagga aattattgat gatgaaacgg ttaatcaagg
     5101 attttccatt accacgcaac aaggtgaagt gattcagccc tctgatgtaa aactgtctaa
     5161 atctgttaga ataggacgat acgatgaagc caactcgtta ctccctgact cggcatttac
     5221 agcaatcagt gaatatttcc tagaactcca aagcagaaac ttaactgaac aatgaaaaaa
     5281 tatctgccct tactacgttt tttgttgatt gcttgtatat cagcattttt agcatggaaa
     5341 gggcaacctt ttgttcatgg gaacgagaag gccgttgatt taattattaa cgtatttgca
     5401 atcttagccg gttttttaat tgccattatg acattgttta gtgatatgag gtttgatgaa
     5461 gatgcaaatt ggcgacaaat tcaaattcgt gaaggcgtac aagaacaacg gtatataaaa
     5521 cattccttac ttttttacac atatcttgcc gtattagttt gtgtttttat tgtcatcttg
     5581 ttggctcata aagaagaata caaaaatgga ccagccattt tttggcttga acggagctat
     5641 ttatttttag cctgtatttc cattttttat tctgtattct tacctgggaa ttta
//
LOCUS       DAWEYF010000130         5692 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.130, whole genome shotgun sequence.
ACCESSION   DAWEYF010000130 DAWEYF010000000
VERSION     DAWEYF010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.130"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            97..813
                     /locus_tag="WGN93_001637"
     CDS             97..813
                     /locus_tag="WGN93_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ0227527.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            962..1864
                     /locus_tag="WGN93_001638"
     CDS             962..1864
                     /locus_tag="WGN93_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ0227528.1"
                     /translation="MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1907..2680
                     /locus_tag="WGN93_001639"
     CDS             1907..2680
                     /locus_tag="WGN93_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ0227529.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEAGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2792..4480
                     /locus_tag="WGN93_001640"
     CDS             2792..4480
                     /locus_tag="WGN93_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ0227530.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4573..5529
                     /gene="gshB"
                     /locus_tag="WGN93_001641"
     CDS             4573..5529
                     /gene="gshB"
                     /locus_tag="WGN93_001641"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ0227531.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWQLFHTLSSGLSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMRLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1323 a         1541 c         1578 g         1250 t
ORIGIN      
        1 atttgtgcaa tgctttaatt cctctgacac gatttgaaac acagccgcct taaaacatct
       61 taaaaaattt gaaagcgtaa aaatacggaa aacatcatga actttgaaaa cgacgacatt
      121 atccatgcgc cgaccacgtc ttccctgatt ctcgaagagc ggcacgattc ggagctgttc
      181 cgtgtttacg ccctgatttt ggacggcatt accgatcagg tgctgctgcc cggcaaaaag
      241 ctgaccgaat ccgaactttg ccgtcagatg gtgtgttcgc gcaacaccgt ccgcggcgcg
      301 ctgtcgcttt tggcgcacga caagattgtc gatttgcaac ccaacagggg cgcgttcgtc
      361 cacgttcccg atttgaaaga aatgcaggat gtgttcaatg cgcgcatcga aatggagacg
      421 atgattttga atatcctcgc agatttgccg gatttggaaa cgcgcctcaa gccgctttat
      481 gcgatgataa ggcgcgaaga agaggcttcc ggcaggggcg accgcgtcgg ctggaaccgc
      541 ctgtccaatg ccttccacgt cgaactggcg cgcctggtgg gcaacgatgt gctgttcgac
      601 attatgaaca cgctgtgcgc gcggtcttcc ctgattgtcg ccgtggcggg cgtgcatcgc
      661 gaggaaaaac acgccatcaa tacgcatacg cattccgaac accgcgaaat cctcgacctg
      721 ctgctggcgg gcaggcgcaa ccgcgtggtc aaaatcctgc gccgccattt gggcaactgt
      781 atggaacgct tggaaaagac tttggaagat tgaatgccgg agcggataag ccgcctgaac
      841 cttcaggcgg ttttttaatg gcgaacctga tgccgtctga aatatggatg cgggtatctg
      901 caattttcag acggcaattt ttaaaccgca tatatcatgc ggcaataaag gaggtcagga
      961 gatggacagc ctgatgacat tgctttcggt attggtaccg atgttcgccg gattttttat
     1021 ccgtgtgccc aagccttacc tgcccgcttt ggacaaggtg ctgtcggttt tggtgtatgc
     1081 cgtgctgctg ctgatcggcg tatcgttgtc gcgcgtggag gatttgggtt cgcggttgga
     1141 cgatatggcg ttgacggttc tgtggctgtt tgtttgtacg gtcggggcga acctgcttgc
     1201 tttggcagtg ttgggaaagt tattcccgtg gcggataaag gggaaaggga agggcgtttc
     1261 ggtcggcgtg tcgggcagtg tggggcagct cggatgcgtg ctgctcggat ttgcattcgg
     1321 caaactgatg cgcgatattt ggatgccgtc tgaaagcgcg ggcatgtatt gtctgatgct
     1381 gctggtgttc ctcatcggcg tacagctcaa aagcagcggc gtatcgttgc ggcaggtttt
     1441 ggtcaaccgc aggggtattc ggttgtcggt ctggtttatg ctttcatctc tttcgggcgg
     1501 gctgctgttt gccgcatcga cagacggtgt gtcgtggacg aaaggtttgg cgatggcttc
     1561 cggcttcggt tggtattccc tctcgggttt ggtcatgacc gaggcttacg gcgcggtatg
     1621 gggcagcatc atgctgctga acgatttggc acgagagctg tttgcactgg catttatccc
     1681 gctgctgatg aagcgttttc cggatgcggc ggtgggggtt ggcggtgcga ccagtatgga
     1741 ttttacattg cccgtgattc agggtgcggg cggtttggaa gtcgtgccgg tagcggtcag
     1801 cttcggcgtg gtggtcaata tcgccgcccc gtttctgatg gtggtgtttt ccgctttggg
     1861 ttgaacgcgg taaaatcggc atcccgatgc aaggaggcag aaaacgatga aaccgaaaat
     1921 ccaaaggcac ggagagattt taagccttgt ccgccggcat cagtttatgt cggtggacga
     1981 gcttgccgcc gcattggacg ttaccccgca gacgatacgc cgcgacatcc gcgagttgga
     2041 ggaggccggc agcctgaaac gccatcacgg cggcgcatct tcgggcggaa acttgccgga
     2101 gggcctgccc gccgaccgcc aaacccggtg tcaaaacgaa aaaaacgcca ttgcccggct
     2161 gattgcggaa cacatccccg acggttcgtc gctgtttgtc agtatcggca cgacgatgga
     2221 agccgtggca tcggagctgg tcaggcggcg cggcagcctg cggattatta ccaacaatat
     2281 ccacgtcgcc tccatcgttt cggcgcggac ggattacacg gtcattatca cttccggagt
     2341 cgtccgccct ttggacggcg gtattaccgg cgtggcaacc gtcgatttta tcaaccagtt
     2401 caaagtcgat tatgccgtga tgagtacgca cggcgtggaa agcgacggtt cgcttttgga
     2461 cgacgactac aaagaagtca gcgtgatgca ggcgatgatt gccaatgcgc gcgtccgctt
     2521 cctcggcgtg gaccacagta aattccgcag caacgcgctg gtcaggctcg gcgacattac
     2581 ggcgtttgac aaagtattta ccgaccggct gcccgatacc gcgatgcaga agatgctgaa
     2641 agaggcgggg gtggaatgcc tgattgccga tgccgtctga acgctatgtc aaagcgcgca
     2701 agtcgggtac aataaacaca tcatcaaacc gcttcagacg gcataaggaa ccgccccaat
     2761 gccgtctgaa gccatctgtt caaagaaaac tatgctcaat aaagaccaat ttgcggacaa
     2821 ccattttatc cgcaccttca tcgaagaaga cctcaaaagc ggcaaacacg aaaccatcca
     2881 aacccgtttt ccgccggagc ccaacggcta cctgcacatc ggacacgcca aatccatctg
     2941 cctgaacttc ggtttggcgt atatttacga cggcttgtgc aacctgcgtt ttgacgatac
     3001 caaccccgaa aaagaaaacg acgaatacgt caacgccatc aaagaagacg ttgagtggct
     3061 cggtttccat tgggcgggcg agccgcgttt cgcttccaac tatttcgacc agctttatga
     3121 ctacgccgtc ggtttggtta aagacggcaa agcgtatgtc gatgatttga cgccagaaga
     3181 aatgcgcgaa taccgcggta cgctgaccga agcaggcaaa aacagccctt atcgcgaccg
     3241 cagtatcgaa gaaaacctcg acctgttcac gcgcatgaaa aacggtgagt tccccgacgg
     3301 cagcaaaacc ctgcgcctga aaatcgacat ggcatccggc aacatcaata tgcgcgatcc
     3361 ggtcatctac cgcatccgcc gcgcccatca ccacaacacc ggcgacaaat ggtgcatcta
     3421 tccgatgtac gactacacgc attgtatttc cgatgccatc gaaggcatca cgcattcctt
     3481 gtgtacgctc gaatttgaag cccatcgtcc gctgtatgac tgggtgttgg acaacatccc
     3541 cgcgccgcac gccacacgtc cgcgccaata cgagttttca cgcttggagc ttttgtacac
     3601 cattacctcc aaacggaaat tgaatcagtt ggttgtggaa aaacacgttt ccggctggga
     3661 cgatccgcgt atgccgacca tttccggtat gcgccgacgc ggctacacgc ccgaagggct
     3721 gcgcctgttt gccaaacgcg ccggtatttc caaatctgaa aacatcgtcg atatgagcgt
     3781 gttggaaggc gcgattcgcg aagagttgga aaattccgcc ccacgcctga tggcggtgtt
     3841 gaacccgctc aaagtgaccc tgaccaactt tgaaaccggc agaacccaaa gccgccgtgc
     3901 cgcgttccat ccgaaccacg aggaaatggg cgagcgcgaa gtacctattt cacaaaccat
     3961 ctatattgaa gccgacgact ttgccgaaaa tccgcccaaa ggcttcaaac gcctgattcc
     4021 cggcggcgaa gtacgcttgc gccacggcta tgtcatcaag tgcgatgaag tcgtcaaaga
     4081 cgaagcaggc aatgtggttg aactcaaatg cagcatcgac cacgacacct tgggcaaaaa
     4141 tccagaaggc cgtaaagtta aaggcgtgat tcattgggtt tccgccgaac acgcagccga
     4201 aatcaaagtc cgcctgtacg accgcctctt taccgtcgag cgtcccgatg ccgtgcgcgg
     4261 cgaagatggc gaatacctgc cgtttaccga tttcctcaat ccggaatccg ttaaggaaat
     4321 cactgcttac gccgaacctg ccgcgaaaga tttgccggca gaaagccgtt ggcagttcga
     4381 gcgtatcggc tacttcgtaa ccgaccgcaa agaccacggc aaagacacgc cggtgtttaa
     4441 ccgcacggtc acgctgaaag attcttggca gcctaagtaa aaccccatcc ctgccgtctg
     4501 aatattgttc ggacggcatt tctcctttac ccgcgaaatg cggcacattc ggcacaccgg
     4561 aaaggaaata tgatgaaagt cctctttatc gccgacccga tggcaagttt caaaacctat
     4621 aaagacacca cctacgcgat gatgcgcgag atggcaaaac gcggctggca gctgtttcat
     4681 accttgagca gcggattgtc ggttaaaaac ggtctggtgg ttgctgatgc gtctgctttt
     4741 gagtttctcg gcgcacaaga cgaccacgac aaaaactggt ttgccgccgc cgacaaagtt
     4801 cagacggcat tgaaagcatt tgatgccgtg attatgcgta ccgatccgcc gttcgatatg
     4861 caatacctct acgccacaca gcttctgacg ctggcggagc agcagggcgc gaaggtcttt
     4921 aacagcggac aggcgatgcg tgatttcaat gaaaaactgg cgattttgaa tttcagccgc
     4981 tttaccgcgc ccacgctggt aacgacccgt tccgccgatg tccgcgcatt tttgaaagaa
     5041 cacggcgaca tcatcattaa accgctcgac ggcatgggcg gtatgggcat cttccgcctg
     5101 accgaaaaag accccaacat cggcagcatc ctcgaaaccc tgatgcggct tgattcccgc
     5161 accattatgg cgcaacgcta cattcccgaa atcgtacacg gtgacaaacg catcctgatt
     5221 atcggcggcg aagtcgtccc ctatgctttg gcgcgtatcc cgcaaaacgg cgaaacacgc
     5281 ggcaaccttg cggcaggcgg gcgcggcgtg gcgcaggaat tgggcggacg cgaccgcgaa
     5341 attgccgaaa cgctcgcccc cgaactcaaa cggcgcggca tcctgcttgc cggtttggac
     5401 gttatcggca gcaacctgac cgaagtcaac gtaaccagcc cgaccggatt ccaagaaatt
     5461 atgaaacaaa aaggtttcga cgtggcggca atgtttgccg atgccgttgc cgcgtggtcg
     5521 gtacgttaaa ccgatgtcgt ctgaaaggct tttgcttcac aaccgtttgg tttgatcggg
     5581 caggcagggt tttccctcag ccggcagaga tacgcttaat gccgtacgga caccccgccg
     5641 ccccgttttc agacggtata tatagtggat taacaaaaat caggacaagg cg
//
LOCUS       DAWEYF010000131         5652 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.131, whole genome shotgun sequence.
ACCESSION   DAWEYF010000131 DAWEYF010000000
VERSION     DAWEYF010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.131"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(129..890)
                     /locus_tag="WGN93_001642"
     CDS             complement(129..890)
                     /locus_tag="WGN93_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227532.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            990..1241
                     /locus_tag="WGN93_001643"
     CDS             990..1241
                     /locus_tag="WGN93_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227533.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEVA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1293..2099
                     /locus_tag="WGN93_001644"
     CDS             1293..2099
                     /locus_tag="WGN93_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ0227534.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            2406..3929
                     /locus_tag="WGN93_001645"
     CDS             2406..3929
                     /locus_tag="WGN93_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ0227535.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            4027..5439
                     /gene="trkA"
                     /locus_tag="WGN93_001646"
     CDS             4027..5439
                     /gene="trkA"
                     /locus_tag="WGN93_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ0227536.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1415 a         1704 c         1369 g         1164 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttaaatt taatccacta tattaatatt ttgcgcctgt
       61 tctatgatgc tttcaagtcg ggtgagaatg caaatgccgt ctgaaacggc tttcagacgg
      121 catggcaatc agcgtttgta ttttaactcg tacttgatgt cgttgaggat tttgcggaca
      181 tcgtgttcca acacgtcttc gactaccgca cccgcctgct cgtgcagcat ctgctggagc
      241 tgataggtaa aaaccgccat ctgcttttgc accgccgtac ggatgatgcc gttgacggta
      301 tcggtcagat gcgggcgcag gcgtttgatc agccgttcgg tcagctcctg ttcggacagg
      361 cagaacactt cgcgccggtt gacggctttc ggattcagga tattgatttg gacgggcatc
      421 aacgcctctt ccgcaccgcc ttcgccgttt tccgcaaccc cgtctgccgc cgtacccgat
      481 tctgccgcat cggcgttttc cccgccttca atctgtccgg tttcaaattc ggcactgtct
      541 tttttggcat cgaacaggat tctccgccgc gattcgatgt gtttttccga aaccgacatt
      601 tgcagggaag cctgcgcgtt gagccagttt tcctgaagga caatcatcgg gtcggtttcg
      661 acttcctcgc cgcaatcggc aacggcggca ttgtgttcct cctgccattt tttcagatac
      721 gccttcaaca cacgggctcg gctctcatcg tccagtttcg gcacaggcgc gtccgttccg
      781 gtttcagagg ggcgggacag cggcgcgtaa gtcggcactg ccttcatacg gcgcgtctga
      841 cgcaggtttt ccaaacgttt ttcccaattc ggctctttat tcgcatccat tttcggcttc
      901 cggtccttaa tctttgcaag cagacaaacc cgcgcccaaa gcgcggtttg atataatggc
      961 gcattttaac agattcgcga ggatacatca tgggcagcat cgaacagcgt ttggaatatc
     1021 tggaagaggc gaacgacgtg ctgcgtatgc agaaccacgt cctgtccacc gccttcaaag
     1081 ccttaatccg cgcccttccc gcagacaccg ccgaagtcgc ggtcgagtcg attcagcttg
     1141 catttgaaga cgcactggca gaattgagct atgaggacag cccgcatacg gatttgttcc
     1201 acgacgttac ttatgcgttt ttccgtgaaa aggaacgtta attttatgtt aaactgattt
     1261 tttaggcttt ttgattaccg aaaggaattt tgatgaatat gaaaaaatgg attgccgccg
     1321 cccttgcctg ttccgcgctc gcgctgtctg cctgcggcgg tcagggcaaa gatgccgccg
     1381 cacctgccgc aaaccccgac aaagtgtacc gcgtggcttc caacgccgag tttgccccct
     1441 ttgaatcttt agactcgaaa ggcaatgtcg aaggtttcga tgtggatttg atgaacgcga
     1501 tggcgaaggc gggcaatttt aaaatcgaat tcaaacacca gccgtgggac agccttttcc
     1561 ccgccttgaa caacggcgat gcggacgttg tgatgtcggg cgtaaccatt accgacgacc
     1621 gcaaacagtc tatggacttc agcgacccgt attttgaaat cacccaagtc gtcctcgttc
     1681 cgaaaggcaa aaaaatatct tcttccgacg atttgaaaaa catgaacaaa gtcggcgtgg
     1741 taaccggcta cacgggcgat ttctccgtat ccaaactctt gggcaacgac aacccaaaaa
     1801 tcgcgcgctt tgaaaacgtt cccctgatta tcaaagaact ggaaaacggc ggcttagatt
     1861 ccgtagtcag cgacagcgcg gtcatcgcca attatgtgaa aaacaatccg accaaaggga
     1921 tggacttcgt taccctgccc gacttcacca ccgaacacta cggcatcgcg gtacgcaaag
     1981 gcgacgaagc aaccgtcaaa atgctgaacg atgcgttgga aaaagtacgc gaaagcggcg
     2041 aatacgacaa gatttacgcc aaatattttg caaaagaaga cggacaggcc gcaaaataag
     2101 cccgcccgtc cgaacacaat gccgtctgaa gccctttcag acggcattgt tcatcaatcg
     2161 gcctacaatg aactgcctgc tgatttctcc ctaccgcaaa gcaacaggca aagattacaa
     2221 atatcaaaat ccgagtaaaa cagtatttta ttaaaacaaa ttgataatca agagattaga
     2281 attatgtatt gtctttaccg tacaaacgct ggcactattt caacctgata aaaaacagcc
     2341 ttcaaaaagg ttgtttaaaa cagcagcaga cacttaccgc cacaaccttg aaaaggaaca
     2401 caatcatgac cgtcatcaaa caggaagact ttatccaaag catttgcgat gccttccaat
     2461 tcatcagcta ctaccatccc aaagactaca tcgacgcgct ctataaagcg tggcagaagg
     2521 aagaaaaccc cgccgccaaa gacgcgatga cgcagatttt ggtcaacagc cgtatgtgtg
     2581 cggaaaacaa ccgccccatc tgccaagata ccggtatcgc aaccgtgttt ttgaaagtcg
     2641 gtatggatgt gcagtgggat gcggatatga gcgtggaaga aatggttaac gaaggcgtgc
     2701 gccgcgccta cacttgggaa ggcaatacgc tgcgcgcttc cgttctcgcc gaccccgccg
     2761 gcaaacgcca aaataccaaa gacaacacgc ccgccgtcat ccatatgagc atcgtgccgg
     2821 gcgacaaagt cgaagtaacc tgcgcggcaa aaggcggcgg ctctgaaaac aaatccaaac
     2881 tcgccatgct caatccttcc gacaacatcg tcgattgggt attgaaaacc atcccgacca
     2941 tgggcgcggg ctggtgtcct cccggcatct tgggcatcgg catcggcggc acgcccgaaa
     3001 aagccgtgtt gatggcaaaa gaatccttga tgagccacat cgacattcaa gagttgcagg
     3061 aaaaagcagc gtcaggtgca gaattgtcca ccaccgaagc cctgcgcctc gaactctttg
     3121 aaaaagtcaa cgcgctgggc atcggcgcgc aaggcttggg cggtctgacc accgtgttgg
     3181 acgtgaaaat cctcgattac ccgacccacg ccgcctccaa accgattgcc atgattccga
     3241 actgcgccgc cacccgccac gtcgaatttg aattggacgg ctcaggccct gtcgaactca
     3301 cgccgccgcg cgtcgaagac tggcccgatt tgacttacag ccccgacaac ggcaaacgcg
     3361 tcgatgtcga caagctgacc aaagaagaag tggcaagctg gaaaaccggc gacgtattgc
     3421 tgttgaacgg caaaatcctc accggccgcg atgccgcaca caaacgcctc gtcgatatgc
     3481 tcaacaaagg cgaagaattg cccgtcgatt tcaccaaccg cctgatttac tacgtcggcc
     3541 ccgtcgatcc ggtcggcgat gaagtcgtcg gtccggcagg tccgaccaca gccacccgca
     3601 tggacaaatt cacccgccaa atgctcgaac aaaccgacct cttgggcatg atcggcaaat
     3661 ccgagcgcgg cgtggccacc tgcgaagcca tcgccgacaa caaagccgtg tacctcatgg
     3721 cagtcggcgg cgcggcgtat ctcgtggcaa aagccatcaa atcttccaaa gtcttggcgt
     3781 tccccgaatt gggcatggaa gccatttacg aatttgaagt caaagacatg cccgtaaccg
     3841 tcgccgtaga cagcaaaggc gaatccatcc acgccaccgc cccgccccaa tggcaggcga
     3901 aaatcggcat catccccgtc aaatcttgag gcgtcatgcc gtctgaacac aaaatctgct
     3961 ttcagacggc atttccgccc ctggttgcgg tacaatccac catttcatca ctcggcgacc
     4021 cacaccgtga aaatcctcat tttaggcaac ggacaggtag gttctaccgt cgcacaaaac
     4081 cttgccgcca tacccaacaa cgacgtaacc gttatcgaca tcgacgaaaa agcattgcag
     4141 gaaacaggca gccgcctcga tgtccaaacc gttttcggca acggcgcatc ccccttcaca
     4201 ttagaacgcg ccggcgcgga agatgccgac ttgctgctcg cgctctcccg cagcgacgaa
     4261 accaacatcg tcgcctgcaa agttgccgcc gacctgttca acatccccgg ccgcatcgcg
     4321 cgcgtccgtt ccagcgaata cctcgaatac ctcagcccca agctcgaaaa caacgaaaac
     4381 ggcagccttt ccatattcgg cataaccgaa accatcagcc ccgaacagct cgttaccgaa
     4441 cagcttgccg gcctgataga ctgcccgggc gcattgcagg ttttacgttt tgcagacgac
     4501 cgcgtgcgga tggtcatcat acaggcgcgg cgcggcggac tgcttgtcgg acgcagcatt
     4561 gccgacatcg cccaagattt gcccgacggg gccgactgcc aaatctgcgc cgtttaccgc
     4621 aacaaccgcc tcatcgtccc cgcgccgcaa accgtcatca tcgaaggcga cgaaatccta
     4681 tttgccgccg ccgccgaaaa catcggcgcg gtcatacccg aattgcgccc caaagaaacc
     4741 agcacccgcc gcatcatgat tgccggcggc ggcaacatcg gctaccgtct cgccaagcag
     4801 ctcgaacacg catacaacgt caaaatcatc gaatgccggc cgcgccgtgc cgaatggata
     4861 gccgaaaacc tcgacaacac cctcgtcctg caaggttcgg caaccgacga aaccctgctc
     4921 gacaacgaat acatcgacga aatcgacgta ttctgcgccc tgaccaacga cgacgaaagc
     4981 aacattatgt ccgccctttt ggcgaaaaac ctcggcgcga agcgcgtcat cggcatcgtc
     5041 aaccgctcaa gctacgtcga tttgctcgaa ggcaacaaaa tcgacatcgt cgtctccccc
     5101 cacctcatca ccatcggctc gatactcgcc cacatccggc gcggcgacat cgttgccgtc
     5161 caccccatcc ggcgcggcac ggcggaagcc atcgaagtcg tcgcacacgg cgacaaaaaa
     5221 acttccgcca tcatcggcag gcgcatcagc ggcatcaaat ggcccgaagg ctgccacatt
     5281 gccgccgtcg tccgcgccgg aaccggcgaa accattatgg gacaccatac cgaaaccgtc
     5341 atccaagacg gcgaccacat catctttttc gtctcgcgcc ggcgcatcct gaacgaactg
     5401 gaaaaactca tccaagtcaa aatgggcttt ttcggataaa ccgccccatt ccggacacat
     5461 tgccgccaag cggtatggaa gcggaataat ggtaggtggg cttcagacgg catcgtcccc
     5521 caccgttatt cccgcgcagg cgggaatccg gtctgttcgg tttcagttgt ttttgggttt
     5581 cgggtaattt ccaaatcgtc attcccgcac aggcgggaat ccaaaccatt ggacagcggc
     5641 aatattcaaa gg
//
LOCUS       DAWEYF010000132         5649 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.132, whole genome shotgun sequence.
ACCESSION   DAWEYF010000132 DAWEYF010000000
VERSION     DAWEYF010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.132"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(241..2988)
                     /gene="tbpA"
                     /locus_tag="WGN93_001647"
     CDS             complement(241..2988)
                     /gene="tbpA"
                     /locus_tag="WGN93_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ0227537.1"
                     /translation="MQQQHLFRLNILCLSLMTALPVYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEAAGRGVQSFNRLVPVEDTNQYANFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILERT
                     QQTFDTRDMTVPAFLTKAVFDENKKQAGSLSGNGKYAGDHKYGGLFTNGENGALVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGS
                     DLRHQDYYYQNANRAYSSKIPTQNGNQKISPNGSQDKPYWVSIGGGNVVTGQICRSGN
                     NTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTL
                     SWNAGIVLKPVDWLDLTYRTSTGFRLPSFSEMYGWRSGDKIKAVKIDPEKSFNKEVGI
                     VFKGDFGNLEASWFNNAYRDLIVRGYEAQIQNGKETAKGDPAYLNAQSARITGINILG
                     KIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYD
                     QPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTI
                     KKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMK
                     F"
     gene            complement(3075..5216)
                     /locus_tag="WGN93_001648"
     CDS             complement(3075..5216)
                     /locus_tag="WGN93_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ0227538.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVSSEKPQAQKDQGGYGFAMRFKRRNWHPQANPKEDEKKLSENDWEATGLPSDPKNL
                     PERQKSVIDKVETGSDSNIYSSPYLTPSNHQNGNTGNSANLPKNEVKDYKDFKYVYSG
                     WFYKHAKQKIDFQNKIAQQGDDGYIFYHGKEPSRQLPASGTVTYKGVWHFATDTKKGQ
                     KFREIIQPSKNQGDRYSGFSGDDGEEYSNKNEATLQGGQEGYGFTSNLEVDFDNKKLT
                     GKLIRNDKVTNATTGDKHTTQYYSLEAQVTGNRFNGKATATDKPQNSETKEHPFVSDS
                     SSLSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDNTANGNTAAASGGAGAAASGGA
                     AAMPSENSKLTTVLDAVELTHGGTAIKNLDNFSNAAQLVVDGIMIPLLPEASESGNTN
                     QGTNGGTAFTYATTYTPESDKKDTQAQTVTGGTQTASNTAGDANGKTKTYAVEVCCSN
                     LNYLKYGLLTRKTVGNTREGGNSSPTAAAQTAQGAQSMFLQGERTDEKEIPKEQNVVY
                     RGSWYGYIANDTSWSGNASDKEGGNKADFTVNFGEKKITGTLTAENRQAATFTIEGTI
                     QDNGFSGTAKTADSGFDLDQSNTTRTPKAYITDAKVQGGFYGPKAEELGGWFAYPGDK
                     QTENATVASGNGNSASSATVVFGAKRQQLVQ"
BASE COUNT         1190 a         1432 c         1407 g         1620 t
ORIGIN      
        1 ctttcgcggg aatgacggga tttgaggttt ctgtttttga ttttctgttt tcgcgggaat
       61 gacggtttag aagttacccg aaacctcaaa aaaacctaaa ccgaacggtc tagattcctg
      121 cctgcgcggg aatgacgaat ttcaagatta cggtattgtc ggggatgatg gaaaacggtg
      181 ggaattgtgt aaaaaatgcc gtctgaagcc tttcagacgg catttgcggc gtttggacgt
      241 ttaaaacttc atttccaagc taaatgtgta gtttcggccg ggggcggcat atcggttgta
      301 aacgccgaca tttttgtgtt gattgactgc gccgccggca gtttgccgca cattttccca
      361 agtaacatag cggtagttga ggaggttgta cacgcccgca cggagggtga agtgtttttt
      421 aatcgtgtaa taaccggaca catccacaat ataccaaggg cgggtacggc gcgcggtggc
      481 ttttgtattg cggctgttgc cgttgagcaa agcccggctg cccaacaact ctgtgatttc
      541 cttggctttg gaataagtca gcataccgtt cacaccccat ttgccttccg gttggtcata
      601 gcccaagccg acgacatagc gcgaaggttg gatggcatca aacagatgtg attgaatatc
      661 ggtgcggtct gcgcgttttt tgatgtcgcg gacacggaca cgattatagg caaatgtaga
      721 ataccaacct tcgggcaatt tatcccatac gccgttccaa tcgattttgc ccaaaatatt
      781 gatgccggta atccgcgcgc tttgggcatt gaggtaagcc gggtcgcctt tggctgtttc
      841 tttgccgttt tgaatttgcg cttcataacc ccggacaatc aaatcgcggt aggcattgtt
      901 gaaccaactt gcctccaagt tgccgaaatc gcctttaaac acgatgccga cttctttgtt
      961 gaacgatttt tccggatcga ttttgacggc ttttatttta tcgcccgacc gccagccgta
     1021 catttccgaa aacgagggca ggcggaagcc ggttgaagtg cggtaagtca aatccagcca
     1081 gtcgacaggt ttgaggacga tgccggcgtt ccaggacagg gtgcggtgcg tgccggtgga
     1141 aacgctgccg tcgtccgaat gcgtgctgcg gtagtcgtag cgcaagcccg cgccgacatc
     1201 cgcccacctg cccaaacgga cattgtcccg aactgccgcg taatagcttt tgccgttgat
     1261 gctgcgcggc gtgcagtccg tataagtatt gttgcccgag cggcagattt gccccgtaac
     1321 cacatttccc ccgcctatgc tgacccaata gggtttgtct tggctgccgt tggggctgat
     1381 tttttgattg ccgttttgag tgggtatttt cgacgaatag gcgcggttgg cattttgata
     1441 ataataatcc tgatggcgga ggtcggaacc aaaacggtca aaaccgaggt tgacgctcag
     1501 gttgtggcgg attttggcgg tatcgaagga ttttttgaat gccgcctgca agagcctgtg
     1561 gctttccccg taaatcacgc ggtcggattt gtaataggaa aacggcttgt cggcactcgg
     1621 gcggcaatat ttgtccgaac cgtcggcaga acagtgcgtc tgctgaaaat gattatccaa
     1681 accgataccc tgccggtcgt aagagaggcg ggcataatcc gcccaagtgt ctttatcggc
     1741 attggtatag acatattcca aaccgtagcg gcttttggtg tgcgtctcgt cgtaaaacac
     1801 gcccgtaccg tattccgcgc ccaccagcgc accgttttcg ccgttggtaa acagaccgcc
     1861 gtatttgtgg tcgcccgcgt atttgccgtt gccggacaaa gaacccgcct gttttttatt
     1921 ttcatcaaaa accgccttgg tcaggaatgc cggaaccgtc atatcgcgcg tgtcgaaagt
     1981 ttgttgcgtg cgttcgagta tgccgccgat gtagtgccgt ttgttttcaa aacgaaaacc
     2041 cgggcggaac agccacgacc ggctttcgta tgaaagcgga tcggcgagga agcggttggg
     2101 gcccgtgtag tctcgggtgg aaaccgtttg ccgttcgtct ttgccgacaa catctttttt
     2161 cggattcgct ttacacgttt cgtaattttt gctttcgcat tcttcttcaa cgatgaaatt
     2221 tgcgtactga ttggtatcct caaccggcac cagcctgtta aagctctgaa cgccgcgtcc
     2281 ggcggcttcg tgtgcgcgaa tttcccccgc gcgccgaccc gtgtggatca gcaaagcctc
     2341 cgcaccgccg atgcgccccg ccagcgcgat ggattgggta agcccccggt ttttgccgga
     2401 ataggcggtt ttactctgaa tcccccactg cctgccttcc ccgataacat cgtcggcggt
     2461 tttggtttga aatgcgaccg agcccgccaa tgcgccgctg ccttgttcga ccgagtttga
     2521 gcctttgctg atttcgacag ctttgacgtt ttcatactcg atttcattga ttgcgccgct
     2581 gctgcccgcc gtcctcgttc cgcccaatgc cgcctgcgcg gtgtaggact gtatttgcgc
     2641 caagccgtcc accgtcaagg aaacgcggtt tttgtccata ccgcgtatcg agtagcccga
     2701 gcttgcgccg cgcccttgtt cgacgacggc gatgccgggg tcgtaacgcg tcaggtcgcg
     2761 gatatcgagt acctgttcct tgctgagggt gtcggcggtt ttgaccaatt tgcccaaacc
     2821 ggttacttca ttatcgcggc gggttttctg ttttttggct tttacctgta tggtatccaa
     2881 ctgtttttcc tgtgcttgtc cggcttgcac attttctgca taaacgggca gcgcagtcat
     2941 taaagacagg cataaaatat ttaatcggaa caaatgttgc tgttgcatag tgtttcccta
     3001 atcttcgctt tcagacggca tcggaaggaa cgatgccgtc tgaagcctta ttctcgattg
     3061 ttcggcagcc gtgcttattg cacaagctgt tggcgtttcg caccgaatac gacagttgca
     3121 ctgcttgctg aatttccatt gccggatgca actgttgcat tttctgtttg tttatcgccc
     3181 ggataggcaa accatccgcc caactcttcg gctttgggcc cgtaaaaacc gccctgcacc
     3241 ttggcatctg tgatatatgc cttaggcgtg cgggtggtat tgctttgatc gagatcaaag
     3301 cctgagtcag cagtttttgc cgtaccggaa aaaccgttgt cctgaatcgt tccctcaatg
     3361 gtaaaggttg ccgcctgcct gttttcagcg gttaacgtgc cggtaatttt tttctcgcca
     3421 aaattcacgg taaagtccgc cttgttgcct ccctctttat ctgaagcatt gccgctccag
     3481 cttgtgtcgt tggcaatata cccgtaccaa gacccccgat aaacgacgtt ttgctctttt
     3541 ggaatctctt tttcatcggt acgctcgcct tggaggaaca tactttgtgc accctgtgcc
     3601 gtttgggcgg cggcggttgg gctgctgttg ccgccttccc tcgtattgcc gacagttttg
     3661 cgcgtcagca acccgtattt cagataattg aggttggaac agcagacttc gactgcatag
     3721 gtttttgttt tgccattggc atcacctgcc gtatttgaag cggtttgcgt gccgcccgtg
     3781 actgtttggg cttgggtgtc ttttttatca ctttccggcg tgtaggttgt tgcgtaggta
     3841 aaggctgttc cgccgtttgt accttgattg gtattcccac tttcggaagc ctcgggcagg
     3901 agcggaatca taatgccgtc gacaaccagt tgggcggcgt tgctgaagtt gtcgagattt
     3961 ttgattgctg tgccgccgtg cgtcagctcg accgcatcca aaaccgtggt cagcttactg
     4021 ttttcagacg gcatagccgc cgcaccgccc gatgctgccg cacctgcgcc gcctgaagcc
     4081 gccgcagtat tgccatttgc agtgttgtct ttggttttcg cgctgccgac aaccgcaact
     4141 tttttatcgt cgctcaaaaa gcggaaaccc aattcctcac ccttcgggcc gaaaaagccg
     4201 ccactcaaag aagacgagtc ggaaacaaag ggatgttcct tggtttcgct gttttggggt
     4261 ttgtcggttg ccgttgcctt gccgttgaag cggttgcctg ttacttgagc ctcaaggctg
     4321 taatattgcg tggtatgttt gtcgccagta gtagcgtttg taactttatc attgcgtatc
     4381 agtttgcccg tcaatttctt attgtcgaaa tccacttcta aattcgaggt aaaaccataa
     4441 ccctcttgac cgccttgtaa agtcgcttca tttttattgg aatattcttc gccgtcatca
     4501 cccgaaaatc cgctatacct gtcgccttga ttttttgaag gttggataat ttcacgaaat
     4561 ttttgaccct tttttgtatc ggtcgcaaaa tgccacacac ctttataggt aactgttcca
     4621 gaagcgggaa gttgtcggga aggttctttg ccgtgataaa agatatagcc gtcgtcgcct
     4681 tgttgtgcaa ttttattttg aaaatcaatt ttttgtttag catgtttata aaaccagccg
     4741 gaataaacat atttgaaatc tttataatct tttacttcat tttttggcag gtttgcactg
     4801 ttgccagtgt tgccgttttg atggtttgat ggtgtgagat agggggaaga ataaatattg
     4861 ctgtcgctgc ctgtttctac tttatcaata actgatttct gtcgctcggg taagttttta
     4921 gggtcacttg gtaatcccgt cgcctcccaa tcattttcag aaagtttttt ctcatcttct
     4981 ttaggatttg cctgcggatg ccaattccgc cgcttgaagc gcattgcaaa accgtatccg
     5041 ccttggtctt tttgggcttg cggtttttcg gaagaaacat cttgatactt tggcgcggga
     5101 cgcggggctt cggtatcgac agaatcaaga tcgaagctgc cgcctccgcc caaacaagca
     5161 ctcaacaaaa acacaggcag caccatagca gcctgattca ccaatggatt gttcataata
     5221 aatccaattc aattaaagaa tgataaggat tattatttta tttattttta acaaatttgc
     5281 aaatactttt ttatttttta gggaatacac caaaatcccg tcattcccgc gcagtcgtga
     5341 atccgaacgc gtccgcacgg aaacctatat cccgtcattc ccacgtatat cccgtcattc
     5401 ccacgtatat cccgtcattc ccacgtatat cccgtcattc ccacatatat cccgtcattc
     5461 ccacgaaagt gggaatccag gacgcaaaat ctcaagaaac cgttttaccc gatacgtttc
     5521 cgcaccgaca gacctagatt cccgcctgcg cgggaatgac ggcggagcgg tttctgtttt
     5581 ttccggtaaa tacccacaag ctaaaatcct gttattttca caaaaacaga aaaccaaaaa
     5641 cagcaacct
//
LOCUS       DAWEYF010000133         5625 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.133, whole genome shotgun sequence.
ACCESSION   DAWEYF010000133 DAWEYF010000000
VERSION     DAWEYF010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5625
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.133"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(127..2259)
                     /locus_tag="WGN93_001649"
     CDS             complement(127..2259)
                     /locus_tag="WGN93_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ0227539.1"
                     /translation="MSIASAPLPALSALIILAHYHGIAANPADIQHEFCASAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPVKRLAMATLPALVWCDDGNHFILAKTDGGGEHAQYLIQ
                     DLTTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            complement(3024..3707)
                     /locus_tag="WGN93_001650"
                     /pseudo
     CDS             complement(3024..3707)
                     /locus_tag="WGN93_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            4044..4478
                     /locus_tag="WGN93_001651"
     CDS             4044..4478
                     /locus_tag="WGN93_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227540.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            4754..5473
                     /locus_tag="WGN93_001652"
     CDS             4754..5473
                     /locus_tag="WGN93_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227541.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
BASE COUNT         1719 a         1214 c         1144 g         1548 t
ORIGIN      
        1 aagacagaaa aagtctttcc ggcagcctgc actttggttt catttcagtc agtaaaccca
       61 gtaaacgacg gtctgaaaac gcagaacgtt acgaaaaaag cagcctacac gcccatcccc
      121 cgccttctac ccgttctgta aatcatacag atagcggtaa tatccgttcg gcttcgccag
      181 caattcctgc tgtgttcccg cttccacaat cctgccttta tccatggcaa tgatccggtg
      241 tgccgtttta acagtggaca gacggtgggc gataatcagc accgtccggt tggcgcaaat
      301 ggcctgcatg ttctgcataa tcgctcgttc actttcataa tccagcgcgc tggtggcttc
      361 atcaaaaatc agaatgcgcg gattggtgat taacgcgcgg gcaatcgcaa tacgctgccg
      421 ctgtccgccc gacaagccgg ccccttgttc gcccaccacg gtgccgtagc cttccggcag
      481 ctccataata aactcgtgtg cgcccgccag tttggctgct tcgataatgc gttccagcgg
      541 catacccgta tccgtcagcg cgatattgtc gcgtatgctg cggttgagca gcacattctc
      601 ctgcaagacc acgccgacct gccgccgcag ccaagcagga gcggccaaag ccaaatcgtt
      661 gccgtccacc aacacccgtc cctgctccgg tacatacaga cgctgcacca atttggtgag
      721 tgtggatttg cccgaccccg aacgtcccac aatccccagc acttcccccg cccgaatccg
      781 caggttcaaa tcctgcaaaa tcagcctgcc gtccgcctta tagcggaaat cgacatgttc
      841 gaacgtaatc tccccccgga tatcgggcaa agccaaatgc gaagacgcat tctcggtcgg
      901 cgcattcaga atatccccca aacgcgccac cgaaatcccc acctgctgga aatcctgcca
      961 caactgcgcc aaacggataa caggcgccgc cacctgtccc gagagcatat taaacgcaat
     1021 cagctgcccc accgtcagct tgccctcaat taccagccgt gcgccaatcc acaacgtcgc
     1081 caccgtcacc agcttctgaa tcagctgcac cccctgctgg ccgaccaccg ccaacttcgt
     1141 tacccgaaat cccgaagcca cataagccgc caactgattg tcccaacgct gcgtcatctg
     1201 cggctccacc gccatcgcct ttaccgtacc caccgcagtg atgctttcta ctaaaaacga
     1261 ctggttgtct gcattgcgcg cgaacttatc gttcagacgc gtccgcagta tcggactgat
     1321 aaatgccgac caaaacgcat aggcaggcaa cgaagccaat accacccaag tcagagtgga
     1381 gctgtaatac cacatcaccg ccagaaagat aaacgaaaac gccaaatcca acaccgaagt
     1441 cagcgcctga ccggtcaaga aattgcgaat ctgctccaat tcccgcaccc gagccaccgt
     1501 atcacccact cgtctgtgct cgaaatagga taaaggcagg gaaagcagat gccggaacaa
     1561 acgcgcgccc aattccacat caatacgtga agtcgtatgt gcaaacagat acgtccgcaa
     1621 accgcccaac acaatctcaa acagcgacac caccaacaaa gccaccgaca ccacatccaa
     1681 agtagagaat ccccgatgta ccagcacctt gtccatcacc acttggaaaa acagaggcgt
     1741 aatcagcgca aacagctgca acaccaccga caccaccaat acttcaaaaa acaaccggcg
     1801 gtatttgatt accgccggaa taaaccaggt aaagtcaaac tttgccaaac tgcccaatac
     1861 cgaagcgcgg gaagcaacca atatcagttt gcccgaatat ctgttagaaa attcggcaaa
     1921 agacaatacc gcagacttat tcgtagttaa atcctgtatt agatattggg catgctcacc
     1981 cccaccgtct gttttagcca aaataaaatg gttgccgtca tcacaccata ccaatgcagg
     2041 taaggtcgcc atagccaaac gtttgacagg ctggcggact acctttgcct tcaatcccaa
     2101 agatttggcg gccaaaagcc attgtgtttc atttaaatcg ctttgtgcgg aagcacaaaa
     2161 ttcatgttgt atatcagcag gattggcggc aatgccgtgg taatgggcga ggatgatgag
     2221 ggcggaaagg gcggggagcg gtgcggatgc gatagacata aataaaatat agttagattg
     2281 gatgtggata acggctggct ggaaaaggaa tatattaagt agaaagaaat atataaataa
     2341 aacagcagaa cgcattgtaa ggatatatat gggaattgta aagagaaagt atggaaaagt
     2401 tctcgtttca ggaaggtaaa acggcttagg aatcgagtta gatgaggatg cctcgcacct
     2461 ctcgtgcctc ctgcataccg ttaaggcaca gggttaaggt gcaggctgct ccgaactctg
     2521 ttgcggtcgg gtaatgttat tttttgtgtt tcaggcagcc tgaaatatct gtatattttt
     2581 gttttaaata gattttaaag attgataact gttcttgacg atttttcaag aaaggagtaa
     2641 atttcaagaa aggagtaaag tgacttatta tcaatgacaa gcaacgcgcg aagtgacaag
     2701 gaaaactatc tacttaaatt ctaaggaggc ttcgaatatc ataaaccaat cagaaacata
     2761 gagataaaaa ttatgtacaa atataatcct cttatacaat ttattgcaca gttgattatg
     2821 tcttatggag caagcgtagg gtgggcactt gctgccccac gcgtttcata tttcaaggca
     2881 gcctgaaacc gtgtgggcat aaatgcctac cctacatccc aaaaaacaag cgcagcctgc
     2941 gtgtgtaggg tgcgaacttt cggcaggtag acacgcagtt ttatattttc aagctgaggg
     3001 atgcttaaga aaagtacaaa acattaaaaa ataaggggct gtactagatt agccctaaat
     3061 ccacaccaat cccgcaagat ttttagctgt cgggacggtg tgccgaagtt aaatcgaaat
     3121 tcgcattctt tcaagaacag cgggaaagat ttgcgatcaa ttccgttcta tttgcgcaag
     3181 acgcgttttg cctgattcca aaagttctca atgccgttta tgtggttctg acggtcagca
     3241 aattccttgg aatggttgat gcggtaatgg ataaaaccgc ttacgtccaa cttgtcgtaa
     3301 ctgctcaggc tgtcggtata aacaatgctg tccggcatga ttttcctttt gatgacaggg
     3361 agtaacgttt cagacctggc attatctaca acaacggtat agacccgtcc attgcgtttc
     3421 agaatgccga agacaaccac ttttcctgcc gcaccgcgac cgcgtctgcc tttacgccgt
     3481 ccgccgaaat agctttcgtc caactcgaca gagccctcaa aaacctcatc ggcagccaag
     3541 gccggataat ggctgatgac catacggatt gtgcggtaga acagaatagc ggagtcgggc
     3601 tggatgccca aaatatcggc agctgaacgg gcggtaactt caagtacaaa aaagcggagc
     3661 agttctttct gtactttttt ctttaatttg cagtgtgttg tcttcatatt tcgagggtaa
     3721 catatctgct aatctagtac agcctcaaac aaaaaagaga aattttaatt tcgctaaatc
     3781 gcataaagat taatcaagag tatcattaaa tgatatgagt gagcatctat aatgccaaga
     3841 agagttgtta agacataatg attattgaaa tagattgtaa aatagatact tagatagtct
     3901 gaaaaacgga tttgtgaaac tttttattac gcgccatcat ttgaaaatga aacttaaaaa
     3961 acacttatca taataaatat tttctttacg ttgtttgcta ataaactcag tgcaatatca
     4021 tcgcaatatt ttatggaaat tttatggata acaaaaaaga atttattaat aatttaacaa
     4081 ataggtatat gtggatctat ccattggtct taaatattct atttctacct ttttaccagt
     4141 cctaccaatc tttttttatt gcgcttggtt gtttgtttgc actggttaga aaaatgcaaa
     4201 gcttagattt taaattacaa aatcatattg tattgttaaa tataaaaagt gcttgggcag
     4261 ataaaaaagt atttttgatt aggatagtag tgtcatggtt ggcagtaatg gaaatatgga
     4321 tgtgttttat ttcggaatca tcaacgtggg tatgcggtgc tttttgttta aatagtgaaa
     4381 tattggaaaa aatttttcgt ggctttggtt attctggtag tttatatttt ttatttatat
     4441 tgatgattga tctcaataag ttaagagaga gtatttgaat ttcatttttt gtttgactta
     4501 aactcaagga gagtaacaat gattggtagt ggtgatacta aacaatgcaa aaaattttct
     4561 gcgtgtgatg gaaaatacca cgtctacgat cccctcgccc tagacttgga cggcgacggc
     4621 atagaaacag tcaccgccaa aggcttttca ggcagcctga agactgagag agtgaatacg
     4681 atgagtatac actctatgcc actaaattga tattcactaa atcataccag ctatatttta
     4741 tttaatgaga catatgaaaa ataaaaatta tttactagta tttatagttt tacatatagc
     4801 cttgatagta attaatatag tgtttggtta ttttgttttt ctatttgatt tttttgcgtt
     4861 tttgtttttt gcaaacgtct ttcttgctgt aaatttatta tttttagaaa aaaacataaa
     4921 aaacaaatta ttgtttttat tgccgatttc tattattata tggatggtaa ttcatattag
     4981 tatgataaat ataaaatttt ataaatttga gcatcaaata aaggaacaaa atatatcctc
     5041 gattactggg gtgataaaac cacatgatag ttataattat gtttatgact caaatggata
     5101 tgctaaatta aaagataatc atagatatgg tagggtaatt agagaaacac cttatattga
     5161 tgtagttgca tctgatgtta aaaataaatc cataagatta agcttggttt gtggtattca
     5221 ttcatatgct ccatgtgcca attttataaa atttgcaaaa aaacctgtta aaatttattt
     5281 ttataatcaa cctcaaggag attttataga taatgtaata tttgaaatta atgatggaaa
     5341 caaaagtttg tacttgttag ataagtataa aacatttttt cttattgaaa acagtgtttg
     5401 tatcgtatta attattttat atttaaaatt taatttgctt ttatatagga cttacttcaa
     5461 tgagttggaa tagttttggt aattttatga gcgcacgctc atccgcgtta gcagaatttg
     5521 gaaatatggt tgctaattta gtttctgcaa aaaatgagaa agatatctcg aaacgtaatg
     5581 aatattacaa acaagctggt tatagtgcat tattagcatt tggta
//
LOCUS       DAWEYF010000134         5592 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.134, whole genome shotgun sequence.
ACCESSION   DAWEYF010000134 DAWEYF010000000
VERSION     DAWEYF010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5592
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.134"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            353..5518
                     /gene="iga"
                     /locus_tag="WGN93_001653"
     CDS             353..5518
                     /gene="iga"
                     /locus_tag="WGN93_001653"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_050177927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ0227542.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKDKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADEIKQRDNAGTIKGYGEHHWKTTGT
                     NSHIGSTAVRLANNERDANNGQNVTFENNGTLVLDQNINQGAGGLFFKGDYTVKGINN
                     DITWLGAGIDVTDGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVIL
                     NQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFEH
                     IRNVDEGARIVNHNTSHASTITLTGKSLITAPQNLSVYEIRNDYDDDDYYGYYSYRKP
                     IPQGKDLYYKNYRYYALKSGGSVNAPMPENGVTENNDWVFMGYTQEEAKKNAMNHKNN
                     QRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGANLNGKISVTQGNVLLSG
                     RPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEITVNQSASFSSGRNVS
                     DITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKALNSFGATQINGNV
                     NLSQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNLSLADSHIHLNNA
                     SDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGHYQLHVQDKTGEP
                     NQEGLNLFDASSVRDRSHLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRVK
                     PVPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQTEEAKRQQAEAERKSAE
                     LAKQKAEAEREARELATRQKAEQERSTAELARRHEKEREAAELSAKQRAGEEERRQTA
                     QSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKAAE
                     LLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELSAKQKAAAEAQ
                     ALAARQQKALARQQEEARKAAELAAKQKAETERKTAELAKQRAAAEAAKRQQEVRQAA
                     ELARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQPQRRKRRAAPQ
                     DYMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDYEEIPLDAFED
                     EDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRSQAAAQPQAQAAAQADAISTN
                     TNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMSNTGYGRDYASAQYRR
                     FSSKRTQTQIGIDRSLSENMQMGGVLTYSDSQHTFDQANGKNTFVQANLYGKYYLNDA
                     WYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLS
                     SADYKLGDDSVKVSSMAVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVG
                     GNSFAYKADNQQQYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
BASE COUNT         1874 a         1349 c         1232 g         1137 t
ORIGIN      
        1 attaccacga aagcgggaat ctaggacgca gggttaagaa aacctacatc ccgtcattcc
       61 ctcaaaaaca gaaaaccaaa atcagaaacc taaaatcccg tcattcccgc acaagcggga
      121 atccaaaaac aaaaagccgc agaaatttaa cggaagaacc gaaccccgaa aaccggcttc
      181 ccgccttcgc ttgaataaca gaacaaagga agcggaaata aaaacatcgg gattcttttt
      241 ttaaattggc aataaaacac caaaattaat gatttacaca acaaaaatta gtcaacaccg
      301 ccaaaccggc gtaaaataca aaacattatc acccttaaaa cggtaaaacc ttatgaaaac
      361 caaacgtttt aaaattaacg ccatatcctt atccatcttt cttgcctatg cccttacgcc
      421 atactcagaa gcggcattgg tcagagacga tgtcgattat caaatattcc gtgactttgc
      481 agaaaacaaa ggcaaatttt ttgtcggcgc aaccgattta tcagtgaaaa acaaacaagg
      541 tcaaaacatc ggcaacgcat tatccaacgt accgatgatt gattttagcg ttgcagatgt
      601 caacagacgc acattaaccg tcatcgatcc ccagtatgcc gtcagcgtca aacatgtaaa
      661 aggagacgaa atctcttatt acgggcatca caatgggcac ttagatgtta gcaatgatga
      721 aaacgaatat cgttcagttg cacaaaatga ctacgaacca aataaaaatt ggcatcacgg
      781 taatcaaggt cgtcttgaag actacaacat ggcacgcctt aataaattcg taacagaagt
      841 cgcacctatt gcaccaacca gtgcaggcgg cggcgttgaa acctataaag ataaaaaccg
      901 tttttctgag tttgtgcgag ttggagcagg tacgcaattt gaatataaca gccgctacaa
      961 tatgacagag ctttcacgag cttatcgtta tgccattgca ggtacgcctt atcaagacgt
     1021 gaatgtcaca tcgaatctaa atcaagaagg cttgattggc ttcggtgata attcaaaaca
     1081 tcattcccca gaaaaactca aagaagtttt atctcaaaac gcattgacta actatgctgt
     1141 gttaggcgat agcggttcac cattatttgc ttatgataaa caagaaaaac gctgggtctt
     1201 tttaggtgct tacgattatt gggcaggcta tcaaaaaaac tcttggcaag aatggaatat
     1261 ctataaaaaa gaatttgcag atgaaatcaa acaacgcgat aacgccggca ccatcaaagg
     1321 ttatggcgaa catcattgga aaaccacggg cacaaacagc catatcggtt cgacagcggt
     1381 aaggcttgcc aacaatgaaa gggatgcaaa caacggacag aatgttacct ttgaaaacaa
     1441 cggcactttg gtattggatc aaaacatcaa ccaaggcgcg ggcggtctgt ttttcaaagg
     1501 cgattacaca gtcaaaggta taaataatga catcacttgg ctaggtgcgg ggattgatgt
     1561 taccgacggc aaaaaagtcg tttggcaagt caaaaatccg aatggcgaca gattggcaaa
     1621 aatcggcaaa ggcacattag aaataaacgg cacaggcgtt aaccaagggc aattaaaagt
     1681 cggcgacggt acggttattc tgaatcaaca agccgatgcc gacaaaaaag tccaggcttt
     1741 ctcccaagtc ggcattgtca gcggacgcgg tacattggta ttaaatagtt caaatcagat
     1801 taatcccgat aacctatatt tcggtttccg tggcggtcgt ttggatgcca atggcaacga
     1861 cttgactttt gaacacatcc gcaacgtgga tgaaggcgcg cgcattgtca accacaacac
     1921 aagccacgcc tccacaatca cattaaccgg caaatcatta attaccgctc ctcaaaatct
     1981 ttctgtttat gaaatccgaa atgattacga tgatgacgat tattatggct attacagcta
     2041 tagaaaaccc attccgcaag gcaaagatct ttattacaaa aactatcgtt attacgccct
     2101 aaaatccggc ggcagcgtga acgcaccgat gcccgagaac ggtgtaacag aaaataacga
     2161 ctgggtcttt atgggatata cgcaagaaga agccaagaaa aacgcgatga accacaaaaa
     2221 caatcagcgt attagcggtt ttagcggttt ctttggcgaa gaaaacggaa aaggacataa
     2281 cggcgcatta aaccttaatt tcaacggcaa aagcgcgcaa aaccgtttct tgttaacagg
     2341 cggtgccaat ttaaacggaa aaataagcgt aactcaaggc aatgtcttgt tatcaggtcg
     2401 tccaacacca cacgcaagag attttgtgaa caaatcttca gcccgaaaag acgcacattt
     2461 ttccaaaaac aatgaagtcg tatttgaaga cgactggata aaccgcacat tcaaagccgc
     2521 agaaattacg gttaatcaat ccgcatcatt ctcttccggc agaaatgtat ccgacatcac
     2581 cgccaacatt accgcaacag acaacgccaa agtaaatttg ggttacaaaa acggcgatga
     2641 ggtttgcgtg cgctcggact ataccggtta cgttacctgc aacacagaca acttatccga
     2701 taaggcttta aacagctttg gagcgacaca gattaacggc aatgtgaatt tgagtcagaa
     2761 tgcggcattg gtcttaggca aggctgcatt atgggggcaa attcaagggc aaggaaacag
     2821 ccgtgtcagc ctaaaccaac atagcaaatg gcatttgacc ggcgacagcc aagtacacaa
     2881 tctgtcattg gcggatagcc atattcattt gaacaacgct tccgacgcgc aaagtgcaaa
     2941 taaataccac acgctcaaaa tcaatcattt atccggtaac gggcattttc attatctgac
     3001 gcacctggcg aaaaatcttg gggataaagt gcttgtgaag gaatccgcat ccggtcatta
     3061 tcagctccat gttcaagata aaacaggcga acccaatcag gaagggctga atctctttga
     3121 tgcatcatcc gtacgagacc gttcgcacct ttctgtttcc ttggcgaata accatgtaga
     3181 tttaggcgca ttgcgttata caatcaaaac agaaaacggt attacccgat tgtacaatcc
     3241 ttatgccgag aaccgccgcc gagtcaaacc ggtcccgtct cctgccacaa acacggcttc
     3301 tcaggcacaa aaggcaacac aaacggacgg tgcacaaatt gccaagcctc aaaatatcgt
     3361 cgtcgcaccg cctagcccgc aggcaaatca aaccgaagaa gcaaaacgcc agcaagcaga
     3421 agcagagcgt aaatcggcag agttagcaaa acaaaaagca gaagccgaac gcgaagcaag
     3481 agagctggcg acccgccaaa aagcagaaca agaacgcagc accgccgaac ttgcacgccg
     3541 gcatgaaaaa gaacgcgaag cggcagagtt gtcggcaaaa caaagggccg gggaagagga
     3601 acgccgtcaa acagcccaat cccagccgca acgccgcaaa cgccgtgccg caccgcagga
     3661 ttatatggca gcttcccaag accgtcctaa acgccgcgga caccgttcgg tacagcaaaa
     3721 caatgtggaa attgcccaag cccaagcaga acttgcgcgc cgacagcagg aagaacgcaa
     3781 agcggcagag ttgttggcaa aacaaagggc agaagccgaa cgtgaggctc aagcattggc
     3841 tgcgcgccga aaagctgaag ccgaagaggc aaaacgccaa gctgccgaac ttgcacatcg
     3901 ccaggaagca gaacgcaaag cggcagagtt gtcggcaaaa caaaaagccg cagctgaagc
     3961 ccaagcattg gcagcacgcc aacaaaaagc ccttgcgcgt caacaggaag aagcacgaaa
     4021 agctgcagag ttagccgcca aacaaaaagc ggaaaccgaa cgcaaaaccg ccgaacttgc
     4081 caagcaaagg gcagcagccg aagcagcaaa acgccagcaa gaagttcgcc aggccgccga
     4141 acttgcgcgt cgtcaagaag cggaacgcca agcagcagag ttgtcggcaa aacaaaaagc
     4201 cgaaacagat cgagaagcgg cagaatccgc gaaacgaaaa gctgaggaag aagagcaccg
     4261 tcaagcagcc caatcccagc cgcaacgccg aaaacgccgt gccgcacctc aggattatat
     4321 ggcagcttcc caaaatcgtc cgaaacgtcg cggacgcaga tctactctgc cggcaccgcc
     4381 ctcgccatca tttgattcat cagcttacgc agcacccagg gccttgcata atccggactg
     4441 gtatgaaaat gactatgaag aaatcccctt ggatgcgttt gaagatgaag atgtatccga
     4501 atcggttgac acatcagaca aacagcctca agacaatacg gaacttcatg aaaaagttga
     4561 gacagtgagt ttgcaaccaa gagccgcgca gccgcgatcc caagccgccg ctcagccgca
     4621 agcccaagcc gccgcgcaag ccgatgcaat cagcaccaat accaactcgg ctttatctga
     4681 cgcaatggca agcacgcaat ctatcttgtt ggatacaggt gcttcattaa cacggcacat
     4741 tgcacaaaaa tcacgcgctg atgcagaaaa aaacagtgtt tggatgtcga acaccggtta
     4801 tggccgtgat tatgcttccg cacaatatcg ccggtttagt tcgaaacgca cgcaaacaca
     4861 aatcggcatt gaccgcagct tgtccgaaaa tatgcagatg ggcggagtat tgacttactc
     4921 tgacagtcag catacttttg atcaggcgaa cggcaaaaat acttttgtgc aagccaacct
     4981 ttatggtaag tattatttaa atgatgcttg gtatgtggcc ggcgatattg gtgcgggcag
     5041 cttgagaagc cggttacaaa cgcagcaaaa agcaaacttt aaccgaacaa gcatccaaac
     5101 cggccttact ttgggcaata cgctgaaaat caatcaattc gagattgtcc ctagtgcggg
     5161 tatccgttac agccgcctgt catctgcaga ttacaagttg ggtgacgaca gtgttaaagt
     5221 aagttctatg gcagtgaaaa cactaacggc cggactggat tttgcttatc ggtttaaagt
     5281 cggcaacctt accgtaaaac ccttgttatc tgcagcttac tttgccaatt atggcaaagg
     5341 cggcgtgaat gtgggcggta attccttcgc ctataaagca gataatcaac agcaatattc
     5401 agcaggtgcc gcgttactgt accgtaatgt tacattaaac gtaaatggca gtattacaaa
     5461 aggaaaacaa ttggaaaaac aaaaatccgg acaaattaaa atacagattc gtttctaaaa
     5521 tactaaattc atagcaaaat aaaatgccgt ccgaactcag gcttcagacg gcatttttat
     5581 agtggattaa ca
//
LOCUS       DAWEYF010000135         5454 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.135, whole genome shotgun sequence.
ACCESSION   DAWEYF010000135 DAWEYF010000000
VERSION     DAWEYF010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5454
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.135"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(337..2613)
                     /locus_tag="WGN93_001654"
     CDS             complement(337..2613)
                     /locus_tag="WGN93_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0227543.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHGTEQSVGLETISVVGKSRP
                     HATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINVGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDNAHAHAHNGKPWIDLRNKR
                     YELRAEWKQPLPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSAISEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENHYNYPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDNQNAPRVPAARLGVHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            3024..3614
                     /locus_tag="WGN93_001655"
     CDS             3024..3614
                     /locus_tag="WGN93_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ0227544.1"
                     /translation="MLLFIDNYDSFTYNIVQYFTELGQEVVVRRNDDITLEEIEALKP
                     QYLVIGPGPCSPKEAGISVEAMRHFAGRLPIMGVCLGHQTIGEAFGGDVIRAKTLMHG
                     KVSPVSHSGKGMFKDLPNPVTCTRYHSLVIARDTMPECLEVTAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            3678..4736
                     /gene="trpD"
                     /locus_tag="WGN93_001656"
     CDS             3678..4736
                     /gene="trpD"
                     /locus_tag="WGN93_001656"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ0227545.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKMPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(4888..5103)
                     /locus_tag="WGN93_001657"
                     /pseudo
     CDS             complement(4888..5103)
                     /locus_tag="WGN93_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003792345.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            5205..5454
                     /locus_tag="WGN93_001658"
                     /pseudo
     CDS             5205..5454
                     /locus_tag="WGN93_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
BASE COUNT         1318 a         1235 c         1493 g         1408 t
ORIGIN      
        1 acctaaaact taaaaaaaca gaaacctttc cgcgtcattc ccacgaaagt gggaatctag
       61 aacccaaatg ctaaggcgat ttatcggaaa cgactgaaac cgaatgaatt ggattcccgc
      121 ctgcgtggga atgatgggat cttgggtttt tgcttttgat ttttctgctt ttgcgagaat
      181 gacggcgtga aagcaagaat gatgaaacaa aaaaaatggg aatgatggca tagtggtttg
      241 ttctttgtct ttgccatatt tcctaacaaa ttgattaaaa agaaaaaagg ttttcagaat
      301 gccgtctgaa aacctttttt gtttgcctgt ccgattttaa aacttcacgt tcacgccgcc
      361 ggtaaagctg cggcccattt gcggcgtatc agagagaaag ctgctgtggg cgtaaacgga
      421 ttggttgagc aggttgtcgg ctttgacgta ccaattccac tcgccatagc gcgtattgcg
      481 gcggtagttt gcgccgaggt tgagcatatg gtgtccgggc gtgcgcgttt cgtagcgggc
      541 gagtttgttt tgggcgaaca cgcggtagta gtccaaattg gcatcgatgc ggtcggtcag
      601 cgaggctttc aggtgaacgc cgaggcgcgc agccggaacg cgaggggcgt tttggttatc
      661 ctgtgcaatg aaaggacggt tgccgtaggc atcttccctg ccaggtaggg aaggcaggtt
      721 tttcagacgg cctcgtacat agtcgccgga aacgccgatg cggtagcgcg gtgtcggttt
      781 gaagtagatt tcgccttccg cgccgtagaa gtccgcaccg gattggttgt agcgcacgag
      841 cttcatttcg ctgtcgtctt cgatggattt ggggccgcgt ccgtcgttta aggtttgggc
      901 gtagatgtag ttgccgaaac ggttgcggta gagtgccaga ttgtattgcc agcggtcgcc
      961 ttcgtagccc agtgcgagtt cgatattgtt ggaacgttct ttgttgaggt gtttgttgcc
     1021 gacttcaaaa gtgttggtgg caacgtgttt gccgtgtgcg tacagctctt gcgttgacgg
     1081 caggcgttcc tgatgggagg cggtcaggct gagtttgtgg tgcggcgtga aataccagtt
     1141 gcccgaaagt gcgaacgagc gggcggtttg gcggtgtgcg ccgaggtcgg gcagggggta
     1201 gttgtagtgg ttttcccgat caatcaatgc tttgtcgtac cggatggagg ctttttgttt
     1261 ttccacgcgt acgccgcctt caagcgtgaa gttgtcccag tttgcctgtt ctacaccgaa
     1321 aaagctgtaa tgttgcactt tgttgtcaag cagcatcggt tgtttgaccg cttcggatat
     1381 ggcagataaa gcactggatt tttgttgtaa atattgcacg ccccagctgc ctttcagacg
     1441 gcctatgggt tggtggcgca actcgatacg ggcgttgtgt gttttgttgt tgaagaagtt
     1501 ctctactgca tcgcctgctt tttcgtcgtg gtggtagtca ttgcggttca gatgtacgcg
     1561 cagggcttca aaaccgggca gaggctgctt ccattcggcg cggagttcgt agcgtttgtt
     1621 gcgcaggtct atccacggtt tgccgttgtg ggcatgggcg tgtgcattat cgtcgtcatg
     1681 aaagccgcag ctcaagcccg ggttgtcgta atcgatgtct tcttcggtca gcaggtgcgg
     1741 ataaagctgc aaatagcgtt tgttaatcaa actcttttgc cagatgatgt cggcgtggca
     1801 atcatcgtat tcgtggctgt gggcaggcag gccgtattgg tctcggcggt cgctatacgc
     1861 cacgccgata aagccttttt cgccaaccca agacagcccg atactgcccg tttgcgaatc
     1921 ggcgtggctg tcgggcaggc gtttcagatt gcggtaacgc ggtacggcgt aatcgcccga
     1981 tttgcggtac agcccttccg tgtgcaacac gaagtttttg cccagaccga cattgatgcc
     2041 gccggacgtg agtttttcca gattgccgct gctcaaacgc agccccagtt cgcccgatac
     2101 gccgttttca ggcatttttt cggggatttt gccatcggca acatcgacca aaccggccac
     2161 attgcccgaa ctatataaaa gcgtaaccgg cccgcgcagg atttcgacct gttgcgacaa
     2221 ggcggtatct accataatgg cgtgatcggg cgaaaagtcc gccatatcgc ctgtttcgcc
     2281 gtgatggttc aaaaccttaa tccgcctgcc cgtttgacca cgaatgacag gagcggacgc
     2341 gccgccgccg tattgcgaag cgtggatgcc cggaacgccg tccaaagcgt cgcccaagtt
     2401 gacggctttt tggcgcaagg tatcgccgga gatgattttg tcggaggcgg tcgaagtgtg
     2461 caacagcccc gaagtggcgt gcggacggct tttgccgacg acgctgatcg tttccaagcc
     2521 caccgattgc tcagttccat gcgcttgggc gaggaggggt gtgttgatta aaagaattga
     2581 taaaacaatg ggtttgagtg tggtttgtgc cattttagct tctcttcgca tttcaaaatt
     2641 ttgttattat ataacattac attctttata tcataagatt ttgagaacac tcagagggca
     2701 taggcaaaaa tttttcaaat gaaacggttg tgatatttaa tggcgttaat ttgtattaac
     2761 cctaatttta gggaagttaa tgatgtgaac acgaacgccg ctatatttgg ctatcggata
     2821 accaaaattt atgagggcat aaaatcggca cgttcccgaa cggtcgaaaa ggtggcaaaa
     2881 tggcgtactt gtcagaatgc gaggctctgc gccagattcc taagggtgca tcaggcacgc
     2941 taagatataa ggggatatgc tcaggggtat cggaaatgca gccaataata aataatattt
     3001 taaatcaata ggttaatcac aaaatgcttt tgtttatcga caattacgac agttttactt
     3061 acaacatcgt ccagtatttt acagaattgg ggcaggaagt tgtcgtgcgc cgtaacgatg
     3121 atattacatt ggaagaaatc gaagccttaa agccgcaata tcttgtaatc ggccccggac
     3181 cgtgttcccc taaagaggcg ggtatttcag tagaagccat gcgccatttt gccggcaggc
     3241 tgccgattat gggcgtgtgc ctcggacatc agacgatagg cgaagcgttc ggcggagatg
     3301 tgatacgggc aaaaaccttg atgcacggca aggtgtcgcc tgtatcccat tcgggtaagg
     3361 gtatgtttaa agatttgccc aatcctgtta cctgtacgcg ttatcacagc ctcgttatcg
     3421 ctcgggatac gatgcccgaa tgtttggaag taacggcttg gactgaggac ggcgagatta
     3481 tgggcgtgcg ccataaggaa tatgccgtcg agggcgtgca gttccacccc gaagccctct
     3541 tgaccgaaca cggacatgat atgttgaaca attttttaat cgaatttcaa aacttcaaac
     3601 cgcaaaaaat ctgacgtgat gccgtctgaa tcccttcaga cggcattttc gtccgaatat
     3661 tgaacggagg acaaaaaatg attacaccgc aacaggctat cgaacgatta atcagcaata
     3721 atgagttgtt ttacgatgaa atgaccgact tgatgcgcca aatgatgagc ggaaaaatgc
     3781 cgcccgaaca aattgcggcg attttgacag gattgcgtat caaggttgaa accgtttccg
     3841 aaattaccgc agctgcagcc gtcatgcgcg agtttgcgac aaaagtgccg ctggagaatg
     3901 cggaggggct ggttgatatc gtcggtacgg gcggggatgg tgccaaaacc ttcaatattt
     3961 cgacgacttc gatgtttgtt gccgcagcgg caggcgcgaa ggttgccaaa cacggaggcc
     4021 ggtcggtctc ttcctccagc ggtgcggctg acgtggtgga gcagatgggc gcaaacctca
     4081 acctgactcc cgaacaggtt gcccaaagta tcaggcagac cggcatcggg tttatgttcg
     4141 cgcccaatca ccacagtgcc atgcgccatg tcgcccctgt acgccgttcg ctcggtttcc
     4201 gaagtatttt caacatattg ggtccgttaa cgaatcctgc gggcgcgccg aaccagcttt
     4261 tgggcgtgtt ccacaccgat ttgtgcggca tcctttccag agtattgcaa cagctcggct
     4321 ccaagcacgt tttggttgtt tgcggggagg gcggtttgga tgaaattaca ctgacgggca
     4381 aaacacgcgt tgccgagctc aaagacggaa aaatcagcga atacgacatc cgcccagaag
     4441 atttcggtat cgaaacccgc cgcaatttgg atgaaatcaa agttgccaat actcaggaat
     4501 ctttgttgaa aatgaatgag gtgctggaag gaagagaagg ggctgcgcgc gatatcgtat
     4561 tgcttaatac cgccgccgcc ctatatgccg gaaatgtcgc tgcttcgctt tcagacggca
     4621 tatctgccgc acgggaagcc atcgattcag gcagggccaa atcgaaaaaa gaggagtttg
     4681 tcggttttca accacaacaa agatgccatt ttcttggaaa gatggagctt gggtgatgcc
     4741 gccatgatta tggaactttt gtggcaaaac ataagcactt cacgaagaga acttaccaaa
     4801 ctgtttttat ataaaaactt ggggctgtac tagataacca gaccaaattc ccattaacta
     4861 attgtcttaa aatctgaatt tgagattcta tttaaaatgc cattggcatt tctttaaatg
     4921 cagccccaaa tgctctttgg gaatgccgtt aaacttacgt aaatggctaa attcactaat
     4981 atcaagcaca tcataactac gaaaggtatc cgtgtataca atgccatcag gcttaacttt
     5041 ctttcggata attggcaaca atgtcgctga ttgcgcatta ggaacaacga cggtataaac
     5101 cttatatatt gcgtccctaa gaagggacga ttaacaaaaa ttaacgtcct ttactttcta
     5161 caagtaacag ggcttttttt tgcccgtttt tgaggattcg caccatggaa gataagcaag
     5221 ggatgacaaa ggcggttgcc ggcgtgatga cggacgcgcc gacggacggc aggaagccgg
     5281 caaccgcttc aaaccttccc cccttatcta acgggggggt acagaaaccg aaacggcagg
     5341 cagggttcag gaagtcttcg aatgttacga aacgtacata acggacggta aaggaaacct
     5401 gttaggcgtt cctcttcggc gcggtgtatc agattcggct ttcattgatc aaat
//
LOCUS       DAWEYF010000136         5343 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.136, whole genome shotgun sequence.
ACCESSION   DAWEYF010000136 DAWEYF010000000
VERSION     DAWEYF010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.136"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            42..515
                     /locus_tag="WGN93_001659"
     CDS             42..515
                     /locus_tag="WGN93_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ0227546.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            641..1744
                     /gene="mnmA"
                     /locus_tag="WGN93_001660"
     CDS             641..1744
                     /gene="mnmA"
                     /locus_tag="WGN93_001660"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ0227547.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGGGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDDETAELVFDEPQW
                     AVTPGQSAVLYEGDVCLGGGIIQSTDKPVIITR"
     gene            1816..3486
                     /locus_tag="WGN93_001661"
     CDS             1816..3486
                     /locus_tag="WGN93_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEZ0227548.1"
                     /translation="MEKIWLDSYEQGVNAEIDITQYGSVSDVFCQSVKKFAGQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPVALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            3598..5232
                     /locus_tag="WGN93_001662"
     CDS             3598..5232
                     /locus_tag="WGN93_001662"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ0227549.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSGHIRERHRHRYEVNNNYVPQLEKAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         1406 a         1452 c         1365 g         1120 t
ORIGIN      
        1 attaagcaca ttccccgtct gatattataa ggagcagaaa gatgaaaaaa ttattggcgg
       61 ccgtgatgat ggcaggtttg gcaggcgcgg tttccgccgc cggagtccac gttgaggacg
      121 gctgggcgcg caccaccgtc gaaggtatga aaataggcgg cgcgttcatg aaaatccaca
      181 acgacgaagc caaacaagac tttttgctcg gcggaagcag ccccgttgcc gaccgcgtcg
      241 aagtgcatac ccacatcaac gacaacggcg tgatgcggat gcgcgaagtc aaaggcggcg
      301 tgcctttgga ggcgaaatcc gttaccgaac tcaagcccgg cagctatcac gtgatgttta
      361 tgggtttgaa aaaacaatta aaagagggcg acaagattcc cgttaccctg aaatttaaaa
      421 acgccaaagc gcaaaccgtc caactggaag tcaaaaccgc gccgatgccg gcaatgaacc
      481 acggtcatca ccacggcgaa gcgcatcagc actaatctgc tgaaaatgtt tgaaatgccg
      541 tctgaaaaag cccgggcttt cagacggcat ttttatgact gcctttaaaa tgtgttaaaa
      601 tccgccttta aaaaccgccg tttccaacca tattctacgt atgaatacga cagcaaaccc
      661 ttccaatatc atcgtcgggc tctccggcgg tgtcgattct tccgtaaccg ccgccctgct
      721 caagcagcag ggttatcaag tgcgcggtgt gttcatgcag aactgggaag acgacgacaa
      781 cgacgaatat tgcagcatca aacaggattc gtttgatgcc atcgccgttg ccgatattgt
      841 cggcatcgac atcgacatcg ttaatttcgc cgcgcaatat aaagacaaag tctttgctta
      901 ttttcttcag gaatacagtg cggggcgcac gccgaatccc gatgtgttgt gcaacgccga
      961 aatcaaattc aaatgctttt tggattacgc cgtagggcag ggcgcggata ccatcgccac
     1021 cggacattat gcgcgcaaag aagtccgcaa cggcgtgcat tacctgctca aaggtttgga
     1081 tcgaaacaaa gaccaaagct atttcctcta ccgcctcaag cctttccaac tcgagcgcgc
     1141 gatttttccg ttgggcggtt tggaaaaacc tgaagtccgc cgccttgccg ccgaatttaa
     1201 tttgccgacc gccgccaaaa aagacagcac gggcatctgc ttcatcggcg agcgtccgtt
     1261 ccgcgagttc ctgcagaaat acctgccgac cgataacggc aaaatggtta cgcccgaagg
     1321 gaaaaccgtc ggcgaacacg tcgggctgat gttttacaca ttgggtcagc gcaaaggttt
     1381 gggcatcggc ggcgggggcg aaccgtggtt tgttgcggct aaagatttga cgaaaaacga
     1441 actgattgtc gtgcaaggac acgaccatcc gctgctctat acccgcagcc tcgtcatgaa
     1501 tgatttgagt ttcacgctgc ccgagcgtcc gaaggcagga cgctatacct gcaaaacgcg
     1561 ttaccgtatg gcggacgcgc cttgcgaatt gcgctatttg gatgatgaaa ccgccgagct
     1621 ggtgtttgac gaaccgcaat gggcggtaac gcccggtcaa tccgccgtgc tgtatgaggg
     1681 cgatgtctgc ttgggcggcg gcatcatcca atcaactgac aagcctgtca tcatcacgcg
     1741 ataaaggtaa tgccgtctga aacggttttc agacggcata gttctgcttc atttcattct
     1801 aaaagaccga aaattatgga aaaaatctgg ttagacagtt acgaacaggg cgtgaatgcc
     1861 gaaatcgaca tcacgcaata cggttccgtc agcgatgtat tttgccaaag tgtcaagaaa
     1921 tttgccggcc aacctgcttt tcaaaacatg ggcaagacgt tgacttatgc cgaaaccggc
     1981 aaactggcga ccgatttcgc ctcttatctg caaaacgtcc ttaaattgcc tcgaggagag
     2041 cgcgtggcaa taatgttgcc caatgtactg caatacccgg ttgcgctttt cggcattttg
     2101 caggcaggtt tggtggcggt gaacaccaat ccgctctata ccccgcgcga gttggagcat
     2161 cagttgaaag acagcggtgc gaccgccatc atcgttttgg aaaatttcgc caacacgctg
     2221 gagctggtgc tgccgcgcac gcagatcaaa cacgtcatcg tcgcctccgt cggcgaaatg
     2281 ttcgggctgc ttaaaggttc gctgatcaat ttcatcatcc ggaaaatcaa gaaaatggtg
     2341 cccgaatacc gtattcggga aaccgtttcc tttcagacgg cattgaaaga gggggcgaag
     2401 cacgttttcc aacctgtcgc attaaaccgc gaagataccg cgctgttgca atacacgggc
     2461 ggcacgacag gtgttgccaa aggggcggtg ctgagtcacg gcaacatctg cgccaatatg
     2521 cttcaggcaa aagaatggat taaaaaccag ttgcgcgagg gcaaagaaac cgttatcgcc
     2581 gccctgccgc tgtatcatat ttttgcctta accgtgaatc tgatgatttt tgccaatgcc
     2641 ggctcgaaaa tcatcctgat taccaacccg cgcgatatga aaggctttat cggagaactg
     2701 aaaaaacagc gggttaatgt atttatcggc gtgaacacgc tgtttaacgc gatggttaac
     2761 cgtcctgatt ttgccgaagt cgatttttca ggattgcggc tgactttggg cggcggtatg
     2821 gcgacccaaa aagccgttgc cgaaaaatgg aaaaaaatca ccggcacgcc catcgtcgaa
     2881 gcctacggtc tgaccgaagc cagccccggc gtgtgctgca accccttaaa catcgaatca
     2941 tacagcggca gcatcggttt gcccgtctcg tccaccgaag tcgaactgcg cgacgcaaac
     3001 ggcaaagaag tccccgtcgg gcagccgggc gaattgtggg taaaaggccc tcaagtgatg
     3061 caaggctact ggaaccgccc cgaagaaacc gccaaagcca tagacgcgcg cggcttcttg
     3121 gaaactggcg atattgccgt catggacgaa aaaggctggt tgaagctggt cgatcgtaag
     3181 aaagacctcg tcgttgtttc cggattcaat gtttatccga acgaaatcga ggaagtcatc
     3241 gcgcatcacg gcaaagtgat ggaagtcgcc tgtatcggcg tacccgacga aaaaaccggc
     3301 gaggcactca aagtattcgt cgtcaaaaaa gacccgtcat tgaccaaaga agaacttatc
     3361 gccttttgcc gcaccgaatt aaccgcatat aaagttccga aaaatatcga attccgcgac
     3421 gagttgccca agtccaacgt cggcaaaatc ctgcgccgcg agttgcgcca aagtaccggg
     3481 aaataaagaa aagatgccgt ctgaaaacag ccgtccaccg ttcagacggc atccgtccgt
     3541 ttgccagaac cgcgcgcttc acgttaaaat cacgcattcc aatatgggta ttccatcatg
     3601 accaaattca ttttcgtaac cggcggcgtt gtctcctcac tgggtaaagg tatcgccgcc
     3661 gcttctattg ccgccatcct cgaatcgcgc ggcttgaacg ttaccatgct caagctcgat
     3721 ccttatatca acgtcgatcc cggcacgatg agcccgttcc aacacggcga agtgttcgta
     3781 accgacgacg gcgcggaaac cgacctcgac ttgggacact acgaacggtt tatcgattcc
     3841 acgatgaccc gccgcaacag cttcagcacg ggacaggtgt acgaaaacgt tatcgccaaa
     3901 gaacgacggg gcgactattt gggcggcacg gttcaagtca ttccgcacat taccgacgaa
     3961 atcaaacgac gcatccatga aggcgcggca ggttacgatg tggcgattgt cgaaatcggc
     4021 ggcacggtcg gcgacatcga atcgctgccg tttttggaag ccatccgcca gatgcgaagc
     4081 cagttgggac gcaacaacac cctgttcgcc cacttgagct acgtccccta catcgccgct
     4141 gcaggcgaaa tcaaaaccaa gccgacccag cacaccgtta aagaaatgtt gagcatcggt
     4201 ttgcaacccg acatcctgat ttgccgtatg gacaggacaa tgcctgcgga cgaacgccgc
     4261 aaaatcgcct tgttctgcaa cgtggaagaa cgcgcgattg tcggcagcta cgatgtggac
     4321 agcatctacg aatgccccga aatgctgcac gaccaaggca tcgataacat cattaccgag
     4381 cagttgcagc ttaatgtgca gcaggcggat ttgaccgcgt ggaaaaaaat cgtccacgcc
     4441 atccaaaacc cgaaacacac cgtcaaaatc gccatggtcg gcaaatacgt cgatttgacc
     4501 gagtcctaca aatcgctgat cgaagccttg aaacacgcag gcattcacac cgaaaccgac
     4561 gtacaaatta cctttgttga cagcgaaagc atcgagaaaa acaacggcga cgtttctatg
     4621 ctcaaagata tggacgccat cctcgttccc ggcggttttg gttcgcgcgg cgtggaaggc
     4681 aaaatcgccg ctgtgcgcta tgcccgcgaa aacaacgtgc catacttggg catctgcctc
     4741 ggtatgcaga ttgcgctgat cgaatacgcc cgcgacgtgg caggtttgaa aggtgcgaat
     4801 tccaccgagt tcgacctcaa atgcgccgcc cccgtcgttg ccctgattga cgaatggcaa
     4861 accgccgacg gcagcgtcga aacccgcgac gaatccgccg atttgggcgg caccatgcgt
     4921 ttgggcgcgc aagaagtcga attgaaagca ggcagcctcg ccgccaaaat ctacggcagc
     4981 ggacacatcc gcgaacgcca ccgccaccgc tacgaagtca acaacaacta tgttcctcag
     5041 ttggaaaaag caggcttggt tatcggcggc gtatccgccg gacgcgaacg cttggtcgaa
     5101 accatcgaac tgccgaacca tccttggttc ttcgcctgcc agttccaccc cgagtttacc
     5161 tccaatccgc gcaaagggca tcctttgttc accgcgtttg tcaaagctgc gttgaacaat
     5221 aaaaaagcct gataaagcgt tacttgatga tcaaaatgcc gtctgaaagc ctgacaaaga
     5281 ccttcagacg gcattttcgc aagtcgggga ttataaaagc catcaattta atttttatgg
     5341 ttt
//
LOCUS       DAWEYF010000137         5335 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.137, whole genome shotgun sequence.
ACCESSION   DAWEYF010000137 DAWEYF010000000
VERSION     DAWEYF010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.137"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            295..1728
                     /locus_tag="WGN93_001663"
     CDS             295..1728
                     /locus_tag="WGN93_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ0227550.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGETLAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLIKENKEKLARIMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALVVLAYEAGVPQDLLPVVSGSASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDAFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALLKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1837..2625
                     /locus_tag="WGN93_001664"
     CDS             1837..2625
                     /locus_tag="WGN93_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ0227551.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEEIRKHLKPLEVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            2993..4549
                     /locus_tag="WGN93_001665"
     CDS             2993..4549
                     /locus_tag="WGN93_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ0227552.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADSQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPAVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4566..5312
                     /gene="surE"
                     /locus_tag="WGN93_001666"
     CDS             4566..5312
                     /gene="surE"
                     /locus_tag="WGN93_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ0227553.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGMPAVAFSLNDASGRYWATAEKALWTLLAHFFKNPPQSPILWNIN
                     IPAVAPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHTD"
BASE COUNT         1246 a         1341 c         1525 g         1223 t
ORIGIN      
        1 gtttggattt ttgccatact ctaccacacg ttgcaactgc aatctttgtt ccttatatat
       61 tattaaaggg ctgcattact tttctttcta aattaccatt gtataaaaag tatttttctt
      121 aaacgacagg gattgcgccc gcgccatatt cagacaccgc ccggatgttg cgctgcccga
      181 tcggatgctt cagacggcat cggaagggtt tgcagttttg gaatatgaag atgataatgt
      241 ccgcgagatt gacggcattt gaaagcggtt attccgcata ccggaggata cgaaatgaac
      301 gaatattacc aattaatcaa gcatcccgat atttcccttt ccccgatttc agacggcatc
      361 ggggtcggca atccggcgac gggcgagact ttggcgtatg tccgcaatac gggttcggac
      421 aaactgaaaa acctgattca aaaagcagct gcggcacaaa aattatgggc ggcaaaaacc
      481 gctttggaac gcgccgacat attgtggcgt tggtattttt tgattaaaga aaacaaagaa
      541 aaactggcgc ggatcatgac gatggagcag ggtaaaagcc tgactgagtc gcgtggtgaa
      601 atcgattatg cggcttcgtt tgtgcgctgg tttgccgaag aagcgcggcg gattgacggc
      661 gatgtgctga cgagtgtgaa agcgtcgcaa aaactggttg tgttgaaaca gcctgtcggc
      721 gttaccgctg cgattacgcc gtggaacttc ccatctgcaa tgattgcgcg caaggctgcg
      781 cctgctttgg cggtgggctg cgcgatgatc gtcaaacccg catcgctcac gcctttaagc
      841 gcgtatgcgt tggtcgtgct ggcttatgaa gcgggcgtgc cgcaggattt gctgcccgtc
      901 gtcagcggca gtgcatcgga aatcggccgt gaatttgcca cgaacccgat tatccgcaaa
      961 atcagcttca ccggctctac cgaagtcggt gcgaaaattt ttgccgacag cgcggcggac
     1021 attaaaaaac tcagtttgga gctgggcggc aacgcgccgt ttatcgtgtt tgacgatgcc
     1081 gatttggaca aagccgtcga aggtgcgctc gccagcaagt tccgcaacag cggtcagacc
     1141 tgcgtctgca ccaaccgcgt ttacgcccaa tcgggcattt acgacgcatt ttgccgcaaa
     1201 ttgagtgaaa aagcagccgc gctcaaattg ggcaacggct tggaggatgg cgtaaaccaa
     1261 gggccgctga ttgaggaaaa agcggtggag aaagttgagc agcacatcgc cgacgcgctc
     1321 ttaaaaggcg cggtctgtct gaccggcggc aaacgcagcg cgttgggcgg aacgtttttt
     1381 gagccgaccg tcttaagcgg cgtaacggcg caaatggcgg tagctcgcga ggaaaccttc
     1441 gggcctttgt gtccggtatt ccgttttgaa accgaagccg aggtcatcga ggctgcgaac
     1501 aatacggaat acggtttggc agcttacctt ttcaccgccg acaccgcccg ccaatggcgc
     1561 gtcggcgaag ccttggaata cggcatggtt ggcatcaata cgggcttaat cagtaatgaa
     1621 gcggcaccgt ttggcggcgt gaaacgcagc ggtttgggac gtgaaggcag caaatacggt
     1681 gcggacgaat atctggaatt gaaatatctg tgtatggatg tcgggtgacg gatgccgtct
     1741 gaacggcagg gtttcagacg gcgccgcatt ttaagcagtc tctatctgtt gtacaatgcg
     1801 ccctgttttt acggttattt ttgatttgaa caagatatga tggaaaacgg aaaaacagtc
     1861 ccgagatggc gttttgcctt gaaaagtgcg ggctggcatc tcttaatcag cctgtcggtt
     1921 gcagggctgg cggcattgct ggtttttaag gtttggtatc cttatcctta tgccgagctg
     1981 acgggagggc tgtcgcttta tcagctggtg gtggctgtcg atattgtatg tggtccgctg
     2041 ctgactttaa ttttggcaag cccgaagaaa aagacaaagg cacgcatggt cgatttttcc
     2101 atggtcggca tcatccagct ggcggctttg gtgtacggtc tgcacagcgt ttctttggcg
     2161 cgtcccgtgg tggaggcgtt tgaaaaagac aggattaatg ttgtgaccgc cgccgaagtg
     2221 gcggttgaag acctgcacaa agcgccggaa gggctgcaaa gcctgtcgtg gttcggcatc
     2281 cgccgcattg cattgaaaga acctgaggat gcggatgaga agaacaagac gctggatttg
     2341 tccctgaaag gtatcgagcc gagtatgcgt cccgaccggt ggctgccgta ttccgacaag
     2401 gaagcagaag aaatccgcaa acatctgaaa ccgctggaag tcttggcgga tgcgagaaaa
     2461 acgacggttg cggacattct gaaacaggca ggtctcgccg aaggggagga gctgtattac
     2521 ctgccgttta ccagcagcag gcagaaagag tggatagtca ttaccgataa agagggcaac
     2581 accaaaggtt acgcgccgat agacggcttc atcattaccc cttaagcgtt gggactccgt
     2641 ccgcactcga acatccgttc ttcgcggcgg tagaatcaga ctgtatttga gaggggcgca
     2701 acccctcaat cagggcaaca cataggggaa ggctttatgt gccgtccgtg tgttgaaaca
     2761 tttcaaaata agctcatgcc gtccgaacat cctttcagac ggtatggcgt tttgccattg
     2821 ccccgataag ctgttaaact atttaaatta tttcgaccga aggtacacgc acatgcaaga
     2881 ccccgagcag agcagcaagc ccgcccgccg ttttttgtac gtaccgtctg ttcaggcagc
     2941 ttgagcgctt caggctgcct tttcgcgttt gaacttgagg aatacgaaaa tcatggattt
     3001 tagttggttg gcagaaccgc atacctggat aggttttgcc acgcttttgg tgttggaagt
     3061 cgtattgggg atagacaatc ttgtctttgt ggcgattttg gcaaacaagg tccagcccgc
     3121 acggcgcgac cgcgcacgga ttatcgggct ggggctggca gtcgtcatcc gcatcattat
     3181 gcttgctttt atggcgcaca tcatcacgct gaccgagccg ctgttccaaa tcggcggcct
     3241 cgccgtttcc ggcaaggaca tgattatgct cgcgggcggt attttcctgc tttacaaagc
     3301 caccaccgaa ctgcatgaac gcctcgaagg gcacaaccgt tttaccgttg ccgacagcca
     3361 aaaaaaacac gcgccgtttt ggggcgtggt cgcgcaaatc ctgatactgg atgccgtgtt
     3421 ttccatcgat tcggtcatta ctgcggtggc gatggtcgat catatcgtcg tggcgatggg
     3481 tgcggtcgtc gtcgcaatgg ctgtaatgat ttctgccagc aaactcttga ccgaatttgt
     3541 ggacaggcat cccgccgtcg tgatgctctg ccttggtttt ttgttgatga tcggtttcag
     3601 cctgattgcc gaagccttcc atttccacat tcccaaaggc tacctctacg ccgccatcgg
     3661 cttctcgatt ttaatcgaat tgtttaacca gatttcgcag cgcaacagcc gcaaaaacga
     3721 ctacatcggc agctcgtggc gcaagcgcac cgccgaaaac gtcttgggta tgatgggcat
     3781 acgcgaaagc gtgcttgccg atgcgggcgg cgaatccggg gacgatgcgc attttgaaga
     3841 aaacgaaaaa tcgatgatac gcagcgtgct gacgcttgcc gaacgcccga ttatgggggt
     3901 gatgatccca cgccgcgaca tcgaacggct ggacatttcc caaagccgcg aagaacagtg
     3961 tgcccaactg caaaacacgc cttacagccg cctgctcgtt gtcggtaagg cgggcgtgga
     4021 cgaacctttg ggctacatca acaaaaaaga cctgctgtcc caactgctgg aaacaggcgg
     4081 tctcgacatt cagacggcat tgcgccagcc gctcgttttg cccgacagca ccaccgcgct
     4141 gggcgcaatc gaactcttcc gccaaagcag cgcggattac gccctcgtcg tggacgagtt
     4201 cggcgcggta ttgggcatgg taaccatgaa agacctgctc gaaaccatcg caggcgagtt
     4261 ccccgaagaa tttgagcgcg aagaagaacc agccgttcag gggaatcccg atgaaagcct
     4321 gacggtggaa ggcgcgttgg aatatgtgga actcgcaccg caactcaacc tgccgcagca
     4381 ggaggaagat gccgatttcc atacggttgc cgggctgatt atggaagaat tgcaaaccat
     4441 ccccgatgtc ggtgattttg ccgatttcca cggctggcgg tttgaagtgg tcgaaaaaga
     4501 agggcagcgc atcgagcggg tcaaaatcac caaattgccc gaagaataag cattcaggat
     4561 agaaaatgaa cgttttgatt tccaacgacg acggctacct ctccgaaggc atcgccgttt
     4621 tggcgcgcgt tacggcggaa tttgccaacg tcagggtggt tgcgcccgaa cgcgacagga
     4681 gcggggtcag caattcgctg acactggaac gccctttgca gttgaaacag gcgcaaaacg
     4741 gcttttacta tgtcaacggc acgccgaccg actgcatcca catcgggcag tctgtatttt
     4801 cggattttca ggccgatttt gtcttttcgg gcatcaaccg gggcgcgaat atgggggacg
     4861 acacgcttta ttcggggacg gttgcggcgg caaccgaagc ctaccttatg ggcatgcccg
     4921 ctgtggcgtt ttccttaaac gacgcttccg gacgctattg ggcaaccgca gaaaaggcac
     4981 tgtggacatt gttggcgcat tttttcaaaa accccccgca gtcccctatt ttatggaaca
     5041 tcaatatccc cgccgtcgcg ccggaagatg tgcggggcat taaaatcgcc cgtttgggca
     5101 ggagacacca cggtcagaac gtcatccccg cgcgcaatcc gcgcggcgaa cagatttatt
     5161 ggatagggcc ggtcggcgaa gtttccgatc gggaagaggg aacggatttc ggtgaatgcg
     5221 gcgcaggttt cattaccgta acgccgttgc aaatcgacct gaccgcctat ccggacatgg
     5281 cggaaacggc ggcgttctgg catacggact gaccgtttca tcaaatatag tggat
//
LOCUS       DAWEYF010000138         5270 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.138, whole genome shotgun sequence.
ACCESSION   DAWEYF010000138 DAWEYF010000000
VERSION     DAWEYF010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5270
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.138"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            113..808
                     /gene="pgl"
                     /locus_tag="WGN93_001667"
     CDS             113..808
                     /gene="pgl"
                     /locus_tag="WGN93_001667"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ0227554.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            789..1775
                     /locus_tag="WGN93_001668"
     CDS             789..1775
                     /locus_tag="WGN93_001668"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ0227555.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1825..2673
                     /gene="hexR"
                     /locus_tag="WGN93_001669"
     CDS             1825..2673
                     /gene="hexR"
                     /locus_tag="WGN93_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ0227556.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2794..4440
                     /gene="pgi"
                     /locus_tag="WGN93_001670"
     CDS             2794..4440
                     /gene="pgi"
                     /locus_tag="WGN93_001670"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ0227557.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGSQKHDSSTERLINLYLQTNRK"
     gene            4454..5005
                     /locus_tag="WGN93_001671"
     CDS             4454..5005
                     /locus_tag="WGN93_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ0227558.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAKGETPNGIKVSELACKTVETEARLEELY
                     NRKKALIDEMVREADKKELPKRL"
     gene            5050..5190
                     /locus_tag="WGN93_001672"
     CDS             5050..5190
                     /locus_tag="WGN93_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227559.1"
                     /translation="MPGYRNWQNGLNAKCADGDEYGVAQSDCRTREINAKTKEIQGYL
                     ID"
BASE COUNT         1338 a         1467 c         1398 g         1067 t
ORIGIN      
        1 aaagcagtcc cgatatttgg tatcaaaagc ataaacaact gttcggccgg catattgctc
       61 aacccatttc cataacggaa tatgccgtct gaaataaaaa aaggacacaa atatgtttgt
      121 ttggcacgaa tacgaaaatg cggcagaagc ggcgcagtct ttggctgacg cagtggcgga
      181 tgctttgcag ggcgcactgg acgagaaggg cggtgcggtg ttggcagttt ccggcggacg
      241 ttcgccgatt gcatttttca acgccctgtc gcaaaaagat ttggattgga aaaacgtcgg
      301 catcaccttg gcagatgaac gcatcgtgcc gaccgtccac gccgacagca ataccggttt
      361 ggtgcgcgaa tacctgttga agaacaaagc ggaagcggca atgtggattc ctatggtgga
      421 agacggaaaa actgaaaccg aattacatcc cgatgctgtt gtcgattatg cactgaaaca
      481 ttacaaacag cccgatgttt tggttttggg tatgggaaac gacgggcata cggcttcgat
      541 tttcccgaaa gctccgcagt ttcagacggc aatcgacggt tcggcaggtg tcgcgctggt
      601 gcataccacg cccgttaccg cgccgcacga gcgcgtcagt atgaccttgg atgcgattgc
      661 ccatacgggg catgtgtttt tggcgatacg gggcgaagag aaaaaagccg tgttcgacca
      721 agccgcacaa ggcgaaaacc gcgaatatcc gatcaacctc gttttgaacc atcaaggagt
      781 gaactgccat gtcttctacg ccgaataaac aagccggata tccccgactg gtcgccgata
      841 tcggcgggac gaatgcacgc tttgcgctgg aaaccgcgcc gcgcgtcatt gaaaaagccg
      901 ccgtgcttcc gtgtaaagac tacgatacgg ttaccgatgc ggtgcgtgcc tatctgaatc
      961 aaagcggtgc aacagccgta cggcacgcgg catttgccat cgccaacccg attttgggcg
     1021 actgggtgca gatgaccaac caccattggg cgttttccat cgaaaccacc cgtcagactt
     1081 tggggctgga caccctcatc cttttgaacg actttaccgc gcaggcattg gcggtaacgc
     1141 agacttcaag caaagacctg atgcaggtag gcgggcaaaa gcctgtcgaa tttgccccca
     1201 aagccgttat cggccccggt accggcctgg gcgtgagcgg attggtgcac agccacgcag
     1261 gctgggtggc tttggcaggc gagggcgggc ataccagttt cccgccgttt gacgatatgg
     1321 aagtgctgat ttggcagtac gccaaaaaca aatacggcca tgtttccgcc gaacgctttt
     1381 tgagcggcgc gggcttgagc ttggtttacg aggctttggc tgcaaaacag aaagccaaac
     1441 ccgccaaact gatgccgtct gaaatcacgg aaaaggcttt gagcggcgcg tcgcctttgt
     1501 gccgtcagac tttggacatc ttctgcgcca tgctcggcac ggttgcttcc aacctcgccc
     1561 tgacgctggg tgcgcgcggc ggcgtgtacc tgtgtggcgg cattattccc cgcgtgttgg
     1621 aatatttcaa aacttccccg ttccgcagcc gtttcgagaa caagggcagg tttgaagcat
     1681 atcttgccgc gattcccgtg tatgtcgtct tgagcgagtt tcccggaatt tccggtgcgg
     1741 ctgcggctct cgacaaccat ttgagaaacg tttaaccaca gcggctcctt gcagcggggc
     1801 tgcattatcg aagggcatat cattatgtta agcaaaatca gcgaatcact ggcaaacctt
     1861 tccggtgcgg aacgcaaagt cgccgaatgt gcattggcgg aacccaaatg gttcgtccat
     1921 gccgccgttg ccgaaattgc cgaacgtgcg tccgtcagcc agccgaccgt catccgattc
     1981 tgccgcagct tgggttataa agggctgccc gagttcaagc tcgccttgtc cgccagcatc
     2041 ggtcatgagg gtatgcccta tgtccacgaa gaactcaacg ccgacgacga tatggcaagc
     2101 gtggtcgaga aagtattggg caatgccgcc gcctcgctgt tgggcgaacg ccgcttcctg
     2161 aaagagtcgg agctggaaaa cgccattgcc acgctgatgc acgcccgccg cgtcgagttt
     2221 tacggtgtcg gcaattccgg tatcgtcgcg caggacgcgc agcacaagtt tttccgtttc
     2281 ggaatgtcca cggtcgccta tgtcgatacg cacacgcagc tgatggcggc atccgttttg
     2341 agcgatcagg atgttttggt tgccatttcc aacacgggtt cgtctatcga acttttggat
     2401 gcggtcagca tcgccaaaga aaacggcgcg tccgtcatcg cactgacccg caacgattcg
     2461 cctctggcgc aacttgccga ctgcgtgttg agcgttgcca cacaggaaaa tgccgaactc
     2521 tacacgccca tggtttcccg cctcttgcag cttgccgtca tcgacatcct tgccatcgga
     2581 cttgccctgc gcttgggcga tgctgccagc ctgcaattgc agaaaagcaa aaaaagcata
     2641 cacaacaagc acatcgatta cgacaaagat tgaccttcag acggcatccc acaaatgccg
     2701 tctgaaatgc cgaacaacgg tcgtcggcgg cttgcggcag tttccggcag ccttttcatc
     2761 ccacaacaaa aaacctcatt caggagcata tagatgaaac accttcacga cttacccgca
     2821 tggtcgaaat tgtggaacca ctttgacgac agcaaaacat tgcatatgcg cgaaatgttc
     2881 gagcaagacc cgcagcgtgc ggaacgctac tggctgcaag tcggcggact gacgctggac
     2941 tactccaaaa accgcatcaa cgacgaaacc atgtcgcttt tgttcgagct tgcccgagaa
     3001 gcaggcgtgc cggagcggat gcggcagatg ttccacggcg aaaaaatcaa taccaccgaa
     3061 aaccgcgccg tcctgcatgt cgcccttcgc aaccgcacca attcgccgat tgtggttgac
     3121 ggtgaagatg tgatgcccaa agtcaaccgc gttttgcaac gtatgggcga atttgcacac
     3181 gaagtccgca gcggaagctg gctgggctat accaaccaag tcattaccga cgttgtcaac
     3241 atcggcatcg gcggatcgga tttgggtccg ctgatgatgt gtaccgcgct caaacctttc
     3301 ggtcatccgc gcctcaatat gcacttcgtc tccaacgtgg acggctcgca actgcgcgac
     3361 gtattgtcca aagtccaccc cgaaaccacg ctgttcatca tcgcctccaa aacatttacc
     3421 acgcaggaaa cgctgaccaa cgcgctgacc gcgcgcgaat ggtttttgaa tcatgcgggc
     3481 gacgaagaag ccgttgccaa acacttcgcc gccgtttcca ccaatcaaaa agccgtcgcc
     3541 gaattcggca tcgacaccgc caatatgttt gaattttggg attgggtcgg cggtcggtac
     3601 agcctgtggt ccgccatcgg attgccgatt atgctgtatc tcggcgaaga aaacttcatc
     3661 gaaatgctca acggcgcgca cctgatggac caacacttca tcaacacacc gctcgagcgc
     3721 aacctgcccg tcattctcgc cctcatcggc atctggtata tcaactacta cggcggcggc
     3781 agccacgtca tcgcgcctta cgaccaacat ttgcaccgcc tgcccaaatt catccagcag
     3841 ctcgatatgg aaagtaacgg caaacaggtt acgttggacg gcaaagcagt cggacacgaa
     3901 acctcgccga ttatctgggg cgaaacgggc attaacggcc agcacgcctt cttccaactg
     3961 ctgcaccaag gcacgcacat tacccccatc gacctgattg cctcgcttga aaaacgcagc
     4021 aacctgcccg gacaccacga aatcctgctt gccaacgtct tcgcccaagc agaagccttt
     4081 atgcgcggca aaacccccga cgaagtccgc gccgaactca aagcgcaggg tatggatgag
     4141 gcgcgcatcg aagagctggt cccgcacaaa accttctccg gtaaccgccc gaccaacctc
     4201 atcctgatgg acaaggtcaa cccgcgtaat atgggcagcc tgattgccat gtacgaacac
     4261 aaaaccttcg tacaaggcat catttggggc atcaacagct tcgaccagtg gggcgtggaa
     4321 ctcggcaaac aactggctaa aaccattttg ggcgaactga ccggcgaaac cgggtcgcaa
     4381 aagcacgaca gctcgaccga acgcctgatc aacctctacc tgcagaccaa ccgcaaataa
     4441 aacctgcgga aaaatgccgt ctgaacgccg accgtttcaa acggcatttt tatcgaacag
     4501 gaaaaccgtc ggtaaacttg cagagcgtgt gcaatcccga tatgatggtt tgcataaatt
     4561 taaacatata tgttccgcag ctatggcact gattaaagag ccgttggaca aagcgaaaca
     4621 aaggaacgaa gaacttgaag cggcagaaga agcggcggcg caggaggcat tgggtcggga
     4681 gcaggaagcc gcccgcgtat ccgaatggga agaacgctac aagttgtcgc gcagcgagtt
     4741 cgagcagttc tggaaaggat tgccgcaaac tgtacagaat aaactgcaag cttcgcagaa
     4801 aacatggaaa agcggtatgg acaaaatctg tgccaacaat gcgaaagcca aaggtgaaac
     4861 gccaaacggc ataaaagtca gcgaactggc atgcaaaacg gtggaaaccg aagcacgctt
     4921 ggaagagctg tacaaccgta aaaaagccct tatcgacgaa atggtcaggg aagcggacaa
     4981 gaaagaactg ccaaagcggc tctgaacagc gcggttcagg cactgcccgc cgatattgcc
     5041 gaaaccgtca tgcccgggta ccgcaactgg caaaacggtc tgaatgccaa atgcgctgac
     5101 ggcgacgaat acggcgtggc acaatccgac tgccgtacca gagaaatcaa tgcgaaaacc
     5161 aaagaaatcc aaggttatct gattgactga aacttggatg cgggaatgtc ggcggctttt
     5221 gcgtttttgt cgtttttata gtgaattaaa tttaaaccga tacatcgttg
//
LOCUS       DAWEYF010000139         5265 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.139, whole genome shotgun sequence.
ACCESSION   DAWEYF010000139 DAWEYF010000000
VERSION     DAWEYF010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5265
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.139"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..142)
                     /locus_tag="WGN93_001673"
     CDS             complement(<1..142)
                     /locus_tag="WGN93_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEZ0227560.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGY"
     gene            381..1280
                     /gene="crgA"
                     /locus_tag="WGN93_001674"
     CDS             381..1280
                     /gene="crgA"
                     /locus_tag="WGN93_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ0227561.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSAEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WGN93_001675"
     CDS             complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WGN93_001675"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ0227562.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKADNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGRTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSEDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLVKEEKAVSDGILSDLDYAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRS"
     gene            complement(4751..>5265)
                     /locus_tag="WGN93_001676"
     CDS             complement(4751..>5265)
                     /locus_tag="WGN93_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227563.1"
                     /translation="KPDEPRPDDYAQAKLEFFNLNSENSIFAYADFYEVHFKSATDFI
                     NFFKINVQAGAAKIREIFQSFSNLFADFIPTQTKKDLDIIYKKIVATRLEPNSPNTIY
                     CYDVRRNGKDKAGKPNRRSVENSEKAKILRPELYEKFKADSNYSFFFSDNPSDEKTDA
                     EIIREVTNRQ"
BASE COUNT         1190 a         1341 c         1379 g         1355 t
ORIGIN      
        1 catagccggc atcaatcacg gtttcttgaa cattgtgtcc gagcgcggtc aaaacttctt
       61 tcgctttttt gtgaagcgtg cggtttaacc cgccgtgaga atgtccgaac gctttgccgc
      121 cgtctaataa taaaatattc atttgttacc tcgtttgtga attgatgaat gtattgtgcc
      181 gttttacttt ataatttaaa agtgcaaaaa taagaaaaca cttttgcgtc aaatgaaata
      241 atcagatgtt ccaacacacg ggatggcaca taaagcaccg ccctgtgtgc cgtcctgatt
      301 cggaaggggt tacacccctc ccaaataaag tctgatcctg ccgccctaaa gggcggggtt
      361 ccaaccgaaa aggaaacacg atgaaaacca attcagaaga actgaccgta tttgttcaag
      421 tggtggaaag cggcagcttc agccgtgcgg cggagcagtt ggcgatggca aattctgccg
      481 taagccgcat cgtcaaacgg ctggaggaaa agttgggtgt gaacctgctc aaccgcacca
      541 cgcggcaact cagtctgacg gaagaaggcg cacaatattt ccgccgcgcg cagagaatcc
      601 tgcaagaaat ggcagcggcg gaaaccgaaa tgctggcagt gcacgaaata ccgcaaggcg
      661 tgttgcgcgt ggattccgcg atgccgatgg tgctgcatct gctggcgccg ctggcagcaa
      721 aattcaacga acgctatccg catatccgac tttcgctcgt ttcttccgaa ggctatatca
      781 atctgattga acgcaaagtc gatattgcct tacgggccgg agaattggac gattccgggc
      841 tgcgtgcacg ccatctgttt gacagccgct tccgcgtaat cgccagtcct gaatacctgg
      901 caaaacacgg cacgccgcaa tctgcagaag agcttgccgg tcaccaatgt ttaggcttca
      961 ccgaacccgg ttctctaaat acatgggcgg ttttagatgc gcagggaaat ccctataaga
     1021 tttcaccgca ctttaccgcc agcagcggtg aaatcttacg ctcgttgtgc ctttcaggtt
     1081 gcggtattgc ttgcttatca gattttttgg ttgacaacga catcgctgaa ggaaagttaa
     1141 ttcccctgct cgccgaacaa acctccaata aaacgcaccc ctttaatgct gtttattaca
     1201 gcgataaagc cgtcaacctc cgcttgcgcg tatttttgga ttttttagtg gaggaactgg
     1261 gaaacaatct ctgtggataa ttctataaaa acctgccata aaattgtttt tactcactta
     1321 ataactttga gaaaaaataa ataagatgat gtatagtcgg cggcaatggc agtctatatg
     1381 gggagcgtga tagggctgtt ccttatgtac ggcttgtgtg tggcaacatc ggctttccaa
     1441 atgacaaaat gccgtctgac accgtaaaaa aaggtttcag acggcatttt caacccgatt
     1501 caggcatcag ctgcggtttt tcaaacgccc gtgcagttct tgaacgctgt acacgcccaa
     1561 gtggtcgcgg cttttcgcgc cttcgctcat cgcttcgccg cccgcagtag tggtgtattg
     1621 cggcacacgt tgctgcaatg cgctttggcg gatgatgtgg ctgtcggaca cggattgcgg
     1681 atcgctggaa acggtattca cgaccagtgc gatttcgccg tttttcagcg cgtcgccgat
     1741 gtgcgggcgg ccttcgggga ctttattgat ggtttgtaca atcagcccgt gttcggtcag
     1801 gtattgcgcc gtgccgcgcg tggcgcagat gccgtagcct aaggcttgga agtttttggc
     1861 ggttttaatg acgcgttctt tgtcttcttc gcgcacggag aggaagattt tgccggtcgg
     1921 gttgaggcgt tcgcccgcgc cgagttgggc tttgtagtag gcttcgccaa agcttgcgcc
     1981 cacgcccatg acttcgccgg tggagcgcat ttccggtccc aaaatcgtat ccacgcccgg
     2041 gaatttgatg aatgggaaca cggcttcttt aacggcatag aaatcgggga caacttcttt
     2101 ttccacgcct tgttctttca gggaaatgcc tgccatacag cgtgcgccga ctttggcgag
     2161 cggcacgccg gtggctttgg agacgaaggg cacggtacgg ctggcgcgcg ggttcacttc
     2221 caacacgaac accacgccgt cttgtacggc aaactgcacg ttcatcagtc cgaccacgcc
     2281 cagcgcgtac gccatggctt tggtttggcg gcggatttcg tcttggattt cttcgctgag
     2341 cgagtagggc ggcagcgagc agccggagtc gccggagtgg atgcccgcct gttcgacgtg
     2401 ctgcatgatg ccgccgataa ccacatcttt gccgtctgaa acgcagtcca catcgacttc
     2461 aatcgcgttg ttgaggaaga aatcgagcaa cacggggctg tcttcggaaa cttgtacggc
     2521 ttcgcgcata tatttttgca actgctcggc agagtgaaca atctgcatcg cgcgtccgcc
     2581 caaaacataa gacgggcgca cgaccagcgg atagccgatt tcttcggctt tgacgagtgc
     2641 ttcttcttcg ttgtgggcga tgcggttggg cggttggcgc agacctaagt cgttcaacac
     2701 tttttggaag cgttcgcggt cttcggcggc gtcgatgctg tcggcggacg tgccgatgat
     2761 gtttacgccg ttttcaacca acgcgttggc gagtttcagc ggggtttgac cgccgtaatg
     2821 cacaatcacg ccccacgggt tttcggtgcg gacgatttcc aacacgtctt ccaatgtcag
     2881 cggctcgaaa tagaggcggt cgctggtgtc gaagtcggtg gacacggttt cggggttgca
     2941 gttgaccatg atggtttcaa agcccgattc gcgcagggcg agtgcggcgt gaacgcagca
     3001 gtagtcaaac tcgatgccct gaccgatgcg gttcgggccg ccgccgagaa tcatcacttt
     3061 tttacggtcg gaaggacggg attcgcattc ttcttcgtaa gtggagtaaa gataggcggt
     3121 ttcggtggcg aactcggcgg cgcaggtatc gacgcgtttg taaaccggat gcagcttcag
     3181 cgcgtagcgg tgttcgcgaa cttctttttc gcttacgttc aacaattgtg ccaaacgttt
     3241 gtcggagaag cctttgcgtt tcagacggcg tagggcggca taatccaaat cactcaaaat
     3301 gccgtctgaa accgcttttt cttctttcac caagtcttcg atttgcgcca agaaccaagg
     3361 gtcgatggcg cagatttcgt ggatttcttc caaagtaaag cctgcgcgga acgcatcggc
     3421 tacaaagagc atgcgctcag gacccgggtt ggccagttcg cggcggattt ccgctttgtc
     3481 ttcgctgcga gggttgaagc cgcacaagcc ggtttccaaa ccacgcaggg ctttttggaa
     3541 gctttcctga atggtacggc ccattgccat tacttcgccc acagatttca tttgcgtggt
     3601 caggcggtcg tctgcggcag ggaatttttc aaacgcgaaa cgcgggattt tggttaccac
     3661 atagtcgatg gaaggctcga acgacgcggg cgtgcggccg ccggtgatgt cgttgcgcaa
     3721 ctcgtccagc gtaaagccga ccgccagctt cgccgccacc ttcgcaatcg ggaaacccgt
     3781 cgccttggaa gccagcgcgg acgagcggct cacgcgcggg ttcatctcaa tcacaatcat
     3841 ctcgccgttt tcagggttca ccgcaaactg aacgttcgag ccgccggtat ccacaccgat
     3901 ttcgcgcaat accgccaagc ttgcgttgcg catgatttgg tattctttgt ccgtcagcgt
     3961 ttgcgccggc gcaacagtga tggagtcgcc cgtatgcacg cccatcgggt cgaagttttc
     4021 aattgagcaa ataatgatgc agttgtcggc cttatcgcgc accacttcca tctcgtactc
     4081 tttccagccg agcacggact gctcaatcag cagctcatgc gtgggcgacg catcgaaacc
     4141 gcgttcgcaa atcgccaaaa actcgtcttt attgtaggca atgccgccgc ccgaaccgcc
     4201 catggtgaaa gaaggacgaa tcagggtagg gaagccgacc tgttcttgcg ccgccaaagc
     4261 ttcgttcatc gtgtggcaga caaaagattt cgggcaggag aggccgattt tctccatcgc
     4321 ctccttaaag cggccgcggt cttctgcttt gtcgatggcg tcttcggtcg cgccgatcag
     4381 ctcgacattg tatttcgcca gcacgccgtt gcgcgccaaa tccagcgcac agttcagcgc
     4441 ggtctgacca cccatcgtgg gcagaatcgc atcaggccgc tctttggcga taatcttctc
     4501 caccgtctgc cacataatcg gctcgatgta ggtaacatcc gccatttcag ggtcggtcat
     4561 aatcgtggcg gggttggaat tcaccagaat gactttatag ccttcttcac gcaaagcctt
     4621 gcaggcctgt gcgcccgaat agtcaaattc gcaggcctga ccgataacga tagggccggc
     4681 gccgatgata aggatggatt ttaggtcggt acgtttgggc atggtgggtc tttcttttga
     4741 agaatttgga ttattgacga ttggtaactt ctctaattat ttctgcatct gttttttcat
     4801 cgcttggatt atctgaaaag aaaaaactgt aattactatc ggctttaaat ttttcgtata
     4861 gctctgggcg caaaattttt gctttttcac tattttccac gctcctgcga ttaggcttgc
     4921 cagccttatc tttcccattt ctacggacat catagcaata aatagtgtta ggagaattag
     4981 gttctaaacg agtagctaca atctttttat aaattatgtc taaatctttt ttagtttgtg
     5041 ttggaatgaa atctgcaaaa agattactaa aactctgaaa aatttctctg attttcgcag
     5101 caccagcctg aacattaatt ttaaaaaaat taataaaatc agtagcactt ttaaaatgaa
     5161 cttcataaaa atcagcatac gcaaatattg aattttcact attcaaatta aaaaactcta
     5221 attttgcttg tgcataatca tctggtctag gttcatcagg tttat
//
LOCUS       DAWEYF010000140         5223 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.140, whole genome shotgun sequence.
ACCESSION   DAWEYF010000140 DAWEYF010000000
VERSION     DAWEYF010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5223
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.140"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WGN93_001677"
                     /gene_synonym="tbpA"
     CDS             complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WGN93_001677"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ0227564.1"
                     /translation="MNKKHGFQLTLTALAVATAFPAYAAQAGGAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTYDIQSQDKTGQFFSVEGERES
                     KPVAKLAGYGKYLNNQLNRWVKERIEQNQPLSAEEEAQVREAQVRHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAEKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISEST
                     GFDEKNQDKYLLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSVSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     HKTKLPDSAGRLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(2934..5066)
                     /locus_tag="WGN93_001678"
     CDS             complement(2934..5066)
                     /locus_tag="WGN93_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ0227565.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPATFKSK
                     DVPTSPPAGPSVETTPVNQPAVGAAMRLPRRNIAAFDKNGNEIPNSKQAEEYLPLKEE
                     DILFLDGTPKEQADKLKKEINGRYPNVKIYTSDLKDAVYKYEHVRAGYVYTRFGTDEI
                     EQNSGGKQVTHRLGYDGFVYYSGERPSQSLPSAGTVEYSGNWQYMTDVKRHRAGKAVG
                     IDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDQKTLNGKLIKNQYVQRKTD
                     EKKPLTIYDITAKLDGNRFTGSAKVNPDLAKNPAGNERLFFHADADQRLEGGFFGDNG
                     EELAGRFISNDNSVFGVFAGKQKTDASNASDTNPALPSGKHTKILDSLKISVDEATDD
                     HARKFAISTMPDFGHPDKLLVEGREIPLVSQEKIIELADGRKMTVRACCDFLTYVKLG
                     RIKTERPAVQPKAQDEEGDEEDTGVDSVEEGEDEIDDEDEVSEEDAEEIEEEADEVEE
                     EEAEADEAEETEEESPTEESGSGSNAILPAPEAPKGRDIDLFLKGIRTAEADIPKTGK
                     AHYTGTWEARIGVPDKKDDQPGTTFIQKDSYANQGAKAEFDVDFGAKSLSGKLTEKND
                     THPAVYIENGVIDGNGFHATARTRDNGIDLSGQGSTSPQSFKANNLLVTGGFYGPQAA
                     ELGGNIIDSDRKFGAVFGAKKDNKEVEK"
BASE COUNT         1126 a         1414 c         1224 g         1459 t
ORIGIN      
        1 ggaaatcttg tttatatcga atcaaaaaaa cctgcacctt aatcagttgg cggtttagtc
       61 cgacttttgg ggtgcagatc aagctttcag acggtatttc ctttaaaact tcatttcaag
      121 cgcgaggctg aagtttctgc ccggtgcggc ataccttcca tagttgctgt cgccgccgtg
      181 ccggtttgcc gtgctttccg cagtctggcg caaggattcc caagtaacgt agcggtagtt
      241 gccgatattg tagatagccg ccctcaaggt cagccgtttt ttcagattca gataggcgga
      301 aacgtctgcc gtcgaccaag aagacgacgc tctttttgtc gaatatcgtt tttgatcgcc
      361 tgccagataa gcaagctcgt cagggttttt ccctttggaa taggtcagca taatgtttgc
      421 gccccatttc ccctcgggct ggtcgtatcc gaaccccaaa acataacgcg acggctgtac
      481 cgcatccaaa gcatagctgc ggagggacaa gtccggccgg ttggataccg atttcggttt
      541 gatacggttg tacgccaaag tcgtgtacaa accttcgggc agtttgccgt acacgccgtt
      601 ccagtcgatt tttcccaata tattaacgcc ttgaagcgac atattttggg cattgtaata
      661 atcgcgtata tcaatctctg tcaatcgtcc tgctgaatcc ggcaatttgg ttttgtgatc
      721 ggcaacggca atcatatcgg tataacggtt gcggaagctg ctgatttcca aaaagccgaa
      781 atcgcccttc cactgcaaac cgatttcgcg gttggctgcc ttttccgatt tcagggcggg
      841 acgctgccag cctttcggat aatcgtgata aatgtctatc ccgaaaagtt cttggaatga
      901 gggcgttctg aagccgctgg aggcgcggta agacacggaa aaatgccggt tcggtttgaa
      961 cacgatgccg ctgttccacg aacggtcaac ataccgcccg ctgcggacga gttcttccga
     1021 cgtggtgaag tttttccggt cgtacctgcc gcccaagctg aaatcaaaat atttgccgat
     1081 tgaaaaacga tcgttcaaag aaatgtggat attgctgccg ttgatttttc ttggcacgca
     1141 tttgcgggaa cgcagggttt cgatgtagcc gcagaccgat ccttcgacga cttcgggctt
     1201 acccaaaaga tacttatctt gattcttttc atcgaatccc gtggattccg aaatccttgc
     1261 cgcattgtgg gaaagctgtt cggggcggga gatcgctttg gaagcatcgt aaccgaagcc
     1321 caaagtcaga tgatgtttcg tccatttgtt tttcagcgat ttctcaaacg aggcattcaa
     1381 aacattgtgc tgttcgcggt agtggaaacg gtcgctgctg tcgtaggaat acggcttgtc
     1441 cgccgacgcg cggcaggatt tgtccacagc aggatacacg gcacaattca gcttcagcgt
     1501 gttgttgtcg gttgccacgc cctgtttgtc aaacgacaac accgccttgt ccgcccaatt
     1561 gtcagaatac gcttcgtttt cataacggta cagcaaaccc atacggcggc ggcggtgatg
     1621 ttcatcaata aatttggtgc gggaatattt caaacctatg cccctgacca actttttatc
     1681 gcccttccac tcttctatat tcggcacaaa atacaagccg tcgcggaaat cgtcgccgtc
     1741 gtacaccccg ctcttgtctc taaacttttc cgcctcgtcc gtaccgtaat actgtttttc
     1801 cgtcatatcg cggatgtcgt aacgctgttt ggtatcctca aacacaccgc cgacataatg
     1861 cctgccgccg aagcggtagc ccagcttggc aagccacgaa ccgctgcggt aatccatcgg
     1921 atcgggcaat atcctgccgc cgcccgtgta agcttgggcg gacagatttt cgtggcgcac
     1981 ctgcgcctcc cgcacctgcg cctcttcttc agcacttaaa ggctgatttt gttcaatacg
     2041 ttcttttacc cagcggttga gctggttgtt caaatatttc ccgtagcccg ccaattttgc
     2101 cacgggcttg gattcacgct cgccctctac tgagaaaaat tgccctgttt tatcttggct
     2161 ttgaatatcg tatgtctggc ggaacgcgtc caaacggttt atgccgtatg ccaccccgtc
     2221 cgcaatatcg ccgtgcgggc gcgtttcccg cccctgacgt tcggttcgga ttagcagccc
     2281 ttcccaaccg tctttgctga accccgcgcc gagcgacttc ataaattggc ggtttttact
     2341 gccgtaggca gtttttgcct gtatccccca gcttttgccg tctgaaatca ggtctgccgc
     2401 ctctttggtg cggaaggcga ctgcgccgcc gagtgcgccg ctgccgtgat cggacgaacc
     2461 ggcacctttg tcgatttcca ccgtgctgat gttttcatat tcgatttcgt tgattgcacc
     2521 gctgccgccg cgtccgccgt atccgctcaa cgatccctgc acggtaaacg cctgtatttg
     2581 ggcaacgccg tcaaccgaaa ccgccacacg gtttttatcc acgccgcgta tcgagtagcc
     2641 gccgctcgcg ccgttgccct gttcgacaac cgccacgccc ggatcgtagc gcgtcaggtc
     2701 gcggataccg agtacctgtt ctttgttcaa cgtttccgac gttttgacga ttttgcccaa
     2761 accggtcgcc tctttcgatc gccgtcccac tttggcggca cggacggtaa cctctttcaa
     2821 ggattgggtc tgcgccgcat caggtgccgc cccccccgct tgggcagcat aagccggaaa
     2881 agcggttgca acagccaagg cagtcagggt aagctgaaaa ccgtgtttct tattcatttt
     2941 tccacctctt tattatcttt cttcgcaccg aataccgcgc cgaatttccg gtcgctgtcg
     3001 ataatattac cgcccaattc cgccgcctgc ggtccataaa agccgcctgt tacaagaaga
     3061 ttgttggctt tgaagctctg cgggctggtc gaaccctgcc cagaaaggtc aataccgtta
     3121 tcccgagtgc gtgctgtcgc gtggaaaccg ttgccatcaa tcacaccgtt ttcaatataa
     3181 acagcggggt gtgtatcatt tttttctgtc aacttacctg aaagcgactt cgcgccgaaa
     3241 tcaacgtcaa attctgcttt tgccccttga ttcgcatagc tatccttttg aatgaacgta
     3301 gtgccaggct gatcgtcttt cttatctggt acgccgatac gcgcttccca agtgccggta
     3361 tagtgtgctt ttccagtttt tggaatgtcg gcttccgccg tgcggatacc tttcaggaaa
     3421 aggtcgatgt ccctgccttt aggggcttcc ggagcgggca ggatggcgtt tgaaccgctg
     3481 ccgctttctt ctgtcggcga ttcttcttcg gtttcttcgg cttcatcagc ttcagcttct
     3541 tcctcttcaa cttcatcagc ttcttcttcg atttcttctg catcttcttc ggaaacttcg
     3601 tcttcatcgt cgatttcgtc ttcgccttct tcgacgctat caacgcctgt atcctcttcg
     3661 tccccctctt catcctgcgc cttcggttgg acggcggggc gttcggtttt tatccgtccg
     3721 agtttcacat aggtcagaaa atcgcaacaa gcacggacgg tcattttcct gccgtcggca
     3781 agctcgatga ttttctcttg gctaaccaaa ggaatttcac gcccttcgac aagaagtttg
     3841 tcgggatgac caaaatcggg catagtggaa atggcaaact tacgggcatg gtcatcagtc
     3901 gcctcgtcaa cggaaatttt cagagaatcc aagattttgg tgtgttttcc agacggcagg
     3961 gcaggatttg tatctgatgc gtttgatgcg tctgtttttt gtttgcctgc gaatacgccg
     4021 aatacgctgt tgtcgttgct gataaaccgt ccggcaagct cttctccgtt atcgccgaaa
     4081 aaaccgccct caagccgctg atcggcatcg gcatggaaaa acaaacgctc attaccggca
     4141 gggtttttcg ctaaatcagg attgaccttg gcactgccgg taaagcggtt gccgtccaat
     4201 tttgcagtaa tgtcgtaaat ggtcagcggt ttcttttcat cggttttcct ttgcacatac
     4261 tgatttttaa tcagcttgcc attcagagtt ttttggtcga aatcaaccgt atatttggca
     4321 ggatgctttt ccctttcgtc gacatcctta gccgcataag aagttgcacc aacatcgtta
     4381 ccataaaatg tgatataacc caaattgtca atgccaaccg ccttacctgc tcgatgacgt
     4441 ttgacatcgg tcatatattg ccagttacca gaatattcca ccgttcccgc actcggtaaa
     4501 gattgggaag gacgttctcc agaataatat acaaaaccat cataacctaa gcggtgggta
     4561 acctgcttac cacctgagtt ctgttcgatt tcatctgttc caaatctagt ataaacatat
     4621 ccggcccgga catgttcata tttatacaca gcatctttta aatcggacgt gtagattttt
     4681 acattaggat accgtccgtt gatttccttt ttaagtttgt cagcctgttc tttcggcgta
     4741 ccgtctaaaa acaggatatc ctcctctttg agcggcagat actcctctgc ctgcttacta
     4801 ttgggaattt cattaccatt tttatcaaaa gctgcgatat tccgccttgg cagccgcatt
     4861 gccgcaccga cggcgggttg attgaccggc gtggtttcta ccgaaggccc ggcagggggc
     4921 gaagtgggaa cgtccttaga cttgaaagtg gcggggtacg cggtcggcgt tgattcgaca
     4981 acaggctgta cgccgaaatt gccgccgata caagatgcca aaagtaaggg caacaagaca
     5041 atgccgccat aattcggttt acacatccct acttttcctc ctatttgatt aataataatt
     5101 atcattatat taatatgtac agataatatc aacccgtttt tatagtgaat taacaaaaat
     5161 caggacaagg cgacgagccg cagacagtac agatacattc cgtcattccc acgaacctac
     5221 atc
//
LOCUS       DAWEYF010000141         4871 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.141, whole genome shotgun sequence.
ACCESSION   DAWEYF010000141 DAWEYF010000000
VERSION     DAWEYF010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.141"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            66..326
                     /locus_tag="WGN93_001679"
     CDS             66..326
                     /locus_tag="WGN93_001679"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227566.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKNRMPAPATIRQIP
                     LFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAGYRYVS"
     gene            433..957
                     /gene="nspA"
                     /locus_tag="WGN93_001680"
     CDS             433..957
                     /gene="nspA"
                     /locus_tag="WGN93_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ0227567.1"
                     /translation="MKKALATLIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYAVTPNVDLDASYRYNYIGKVNTVKN
                     VRSGELSVGVRVKF"
     gene            1093..1482
                     /locus_tag="WGN93_001681"
     CDS             1093..1482
                     /locus_tag="WGN93_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ0227568.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAIAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1560..2390
                     /locus_tag="WGN93_001682"
     CDS             1560..2390
                     /locus_tag="WGN93_001682"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ0227569.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRITKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLKGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2405..3862
                     /locus_tag="WGN93_001683"
     CDS             2405..3862
                     /locus_tag="WGN93_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ0227570.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3903..4292)
                     /locus_tag="WGN93_001684"
     CDS             complement(3903..4292)
                     /locus_tag="WGN93_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227571.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKHPEIYQRFQHFFPFVELPLL"
     gene            complement(4474..4797)
                     /locus_tag="WGN93_001685"
     CDS             complement(4474..4797)
                     /locus_tag="WGN93_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227572.1"
                     /translation="MNILASDRNYELNIEIFIDNIIHFQITDESYKVKFSEYLFENKE
                     KNDWDRNPAINYFFEIIDDSYMDWLKEESFDFFEKKYYKAYIFFFSDSVIEVISSTEP
                     VFYSK"
BASE COUNT         1206 a         1493 c         1031 g         1141 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaaaa ccgtatgcct gcacctgcaa
      181 caatccgaca gataccgctg ttttttccaa accgtttgca agtttcaccc atccgccgcg
      241 tgatgccgcc accaccattt aaaggcaacg cgcgggttaa cggctttgcc gtcggcaaag
      301 cagccggata ccgctacgta tcttgaagta ttaaaaatat tacgatgcaa aaagaaaatt
      361 taagtataat aaagcagaat tctttaacgg attcttaaca atttttctaa ctgaccataa
      421 aggaaccaaa atatgaaaaa agcacttgcc acactgattg ccctcgctct cccggccgcc
      481 gcactggcgg aaggcgcatc cggcttttac gtccaagccg atgccgcaca cgcaaaagcc
      541 tcaagctctt taggttctgc caaaggcttc agcccgcgca tctccgcagg ctaccgcatc
      601 aacgacctcc gcttcgccgt cgattacacg cgctacaaaa actataaagc cccatccacc
      661 gatttcaaac tttacagcat cggcgcgtcc gccatttacg acttcgacac ccaatcgccc
      721 gtcaaaccgt atctcggcgc gcgcttgagc ctcaaccgcg cctccgtcga cttgggcggc
      781 agcgacagct tcagccaaac ctccatcggc ctcggcgtat tgacgggcgt aagctatgcc
      841 gttaccccga atgtcgattt ggatgccagc taccgctaca actacatcgg caaagtcaac
      901 actgtcaaaa acgtccgttc cggcgaactg tccgtcggcg tgcgcgtcaa attctgatat
      961 gcgccttatt ctgcaaaccg ccgagccttc ggcggttttg ttttctgcca ccgcaactac
     1021 acaagccggc ggttttgtac gataatcccg aatgctgcgg cttctgccgc cctatttttt
     1081 gaggaatccg aaatgtccaa aaccatcatc cacaccgaca aagcccccgc cgccatcggc
     1141 gcgtacagcc aagccgtccg agcaggcgac accgtttaca tgagcggtca aatccccctc
     1201 gatcccgcca cgatgaccgt cgtcggcaac ggcgatttcc gcgccgaagc gcgccaagtg
     1261 ttccaaaacc tgcaagccat cgccgaagcg gcaggcggca cgctggccga catcgtcaaa
     1321 ctcaacgcct acctgaccga cttgggcaat ttcgccgtct tcaacgaagt gatggcggaa
     1381 tttattgccg agcccttccc cgcccgcgcc gccgtcggcg ttgcctcgct gcccaaaggc
     1441 gtgcaggtcg aagccgaagc cgtcctcgtt ttgaacgcat aattccacgt tcggactgca
     1501 tgatatttca aaaccatgcc gtccgaaccg caacactttc ccacttcaca acatctgcaa
     1561 tggcacatta cgcaatcggc gacatacaag gctgtttcga cgaactgacc gcgctgctcg
     1621 gcaaaatcgg tttcaaccac ggcacggaca ccctctggct gacgggcgac atcgtcaacc
     1681 gcggcccgaa atccctcgaa acgctgcaat tctgcatccg gcacgaaaac agtgtgcaaa
     1741 tcgtcctcgg caaccacgac ctgcacctgc tcgctgtcgg ctgcggcgaa ggtgcgccca
     1801 aacgcagcga cacaatcgaa cccatactca aacaccccga cggaaaaaaa atgctcgact
     1861 ggctgcgtgc gcaaccgctg ttgatacgcg agggcagccg cgtgatggta cacgccggca
     1921 tcctgccgca atggcgcata accaaagccg aatcgctcgc tagagaagcc gaagccgaac
     1981 tgcgcggcaa aaaatacgtc aaattcttct ccaaaatgta cggcaacaaa ccggccgcgt
     2041 gggacgaagg tttgaaaggc tatgcccgcc tgcgcttcat cgtcaacgcc ttcacgcgga
     2101 tgcgcgccct gacctttaaa aacgaactgg atttcgacta caaatccaca gtgaaaaaaa
     2161 tgccgcctta cctgcgcccg tggttcaaag cccccgaccg gcaaaacctc gaccgcacca
     2221 tcatcttcgg acactggtcc tcgctgggct acacgaatgc cgacaacgtc atctcgctgg
     2281 acaccggcgc gctgtggggc ggacagctga ccgccgtcaa cctcgaaacg gaagaaatta
     2341 cccaagtcca agccgccggc ggcatagact ggaaaagctt cgcaaaataa cggaccgccc
     2401 cactatgcac aaaatcctgc ccatcgccca cgtcctctcc cgactgggta tgctgttttc
     2461 ctttatcctg ctgatacccg ccgccctctc ctacgccttt tcggacggcg cgtacaccgc
     2521 cttcgccacc accgcgaccg ttaccctttc cggctcgtgc atcgtccggc tcgccaccct
     2581 ccggttcagg cgcgaactgc gcccgcgcga cggcttcacc ctcgtcctga tgttgtggct
     2641 ggcgtttgcc gctatggcgg cgatgccgat gtacctgtat ttcccgaata tgggctttac
     2701 cgacgcattt tttgaatcga tgtcgggact gaccaccacc ggcgcgaccg tcatccccca
     2761 cgtcgacggg ctcgccccct ccgtcaactt ttggcggcat atgctcaact ggctgggcgg
     2821 gatgggcatc atcgtccttg ccgtcgccat cctgcctatg ctcggcgtag gcggcacgca
     2881 gttattcaaa gccgaaatcc ccggcattga caaagaaagc aaaatgtcgc cgcgcatttc
     2941 ccaagtggcg aaaaaactct ggttcggcta caccctgatc accatcctcg cggcagcctg
     3001 cctgcatttt gccgggatgg gctggttcga tgccgtctgt cacgcgatgg cgaccctctc
     3061 gctgggcggg ttttccaccc acgatgccag catagcttat tacaactccc ccctcatcga
     3121 agcggtcatc atcgttttca ccattgtcgg cggcatcaat tttgccaacc atttcgccgc
     3181 cctcaacagc cgcagcctca aaacctattg gaaagacgaa gaatgccgga cgatgctgct
     3241 gctgctctcc ggcagcatcc ttgccgccgc cctgtacctg tggcacaccg gctattacgc
     3301 cggttttacc gaatccctgc gctacaccgc cttcaacttc gtctccatcg gactggcaaa
     3361 cgggctggcc aacaccgact tcgcacaatg gccgctcctg atttccctgt ggatgttttt
     3421 cctcgccaac atcctcgcca actccggctc gaccggcggc ggcatcaaaa ccatacgcgc
     3481 cctcgtcctg ttcaaattca gcctgcgcga aatgatggtg ctgctgcacc ccaaagccgt
     3541 ccgcaccgtc aaaatcagcg gcaaggccat acccgaccgc ctcgcgctga ccgttatgtc
     3601 cttcatcttc atctacttta tgaccgtcgt cctcttcagc ttcctgctga tggcgagcgg
     3661 tatggaattt accaccgcct tcaccgccgt catcgcctgc atcaccaacg ccggccccgg
     3721 cttgggcgaa gtcgggcccg ccggcaatta cgccggtttg gacgtgatgc agaaatggat
     3781 ctgcgttacc gccatgctct tgggcagact ggaaatcttc accgtcttca tcctcttcac
     3841 tcccgcctac tggaagaaat aaaaaatgcc gtctgaaaac ttttcagacg gcatcttgtc
     3901 ctttaaagaa gcggaagctc tacaaaagga aagaaatgct gaaacctctg ataaatttca
     3961 ggatgtttct ctaaggcttt taatgctttt tcttttgaaa taggcggatc atagacatct
     4021 atccccctta agaaggcaat gcccgttaat gcattttttt gatcatttga aatgtaacca
     4081 taattaacga ctccaattac atcataaatt tcccctatac tcttatcaaa atcaatcaaa
     4141 tcaaaaatat acaatggaat tgtatcaata ggagtatctc tgacaactat atccaaccat
     4201 aatttaaatt cagaaagatt aatagcatca tagaacatac agactattgc aaatcctaaa
     4261 tcttcacaat tttctttact aattttccac ataattattt acctttatcc attgcttccc
     4321 aaccgataca tccggtattt tagcttctcc ttttccgtca aacactcctt tggttacctg
     4381 ctttgtgtca aaaataccgt ctgaaagccg aatatcgttt cagacggtat tttgattgtt
     4441 gggtttttaa tcagagcttt gtttgataat ttgttatttt gaataaaata caggttctgt
     4501 cgagctgata acttctatta cagaatcgct aaaaaagaaa atataagcct tataatattt
     4561 cttttcaaaa aaatcaaaac tttcttcttt caaccagtcc atataactat catctattat
     4621 ctcgaaaaaa taatttatag caggatttct atcccaatca tttttttctt tattttcaaa
     4681 taaatattct gaaaatttta ctttataaga ttcatccgtt atttgaaaat gaattatatt
     4741 gtcaataaat atttcaatat ttaattcata atttcggtcg gatgccaaaa tgttcacatc
     4801 ttgttcggta acacaaattt tgtccacata aaatctgtga ttattgttag aaaattgtaa
     4861 tggtttaatc t
//
LOCUS       DAWEYF010000142         4863 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.142, whole genome shotgun sequence.
ACCESSION   DAWEYF010000142 DAWEYF010000000
VERSION     DAWEYF010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.142"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(210..938)
                     /gene="rmpM"
                     /locus_tag="WGN93_001686"
     CDS             complement(210..938)
                     /gene="rmpM"
                     /locus_tag="WGN93_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ0227573.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1302..2252
                     /locus_tag="WGN93_001687"
     CDS             1302..2252
                     /locus_tag="WGN93_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ0227574.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2365..3099)
                     /gene="fnr"
                     /locus_tag="WGN93_001688"
     CDS             complement(2365..3099)
                     /gene="fnr"
                     /locus_tag="WGN93_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ0227575.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3304..4725
                     /gene="hemN"
                     /locus_tag="WGN93_001689"
     CDS             3304..4725
                     /gene="hemN"
                     /locus_tag="WGN93_001689"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ0227576.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTASV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
BASE COUNT         1240 a         1331 c         1178 g         1114 t
ORIGIN      
        1 gcggcaatgg gacacaaacc tgaatctgaa tccgaacctg caccccgatt ctgacgatag
       61 ccgtttcaga aaaccaccca aaaaaacaaa ccccgcaaaa gcgggggttt gtttcacatc
      121 atcgatgccg accgacgttt cacgaatatt gcaacagtac ctggtacaaa atccactaac
      181 ctcatgcatc ggcaagatat tgcctagcct tagtgttggt gatgattgtg tgccggcaca
      241 acctgacggg ttacgatgct gcggattttc acatccacac ggcggtcagg ttcgatacat
      301 gcaatcagag cctcacgttt tttggcttta gagactttcg cacccagttt ggcaacttcg
      361 gcttcacaaa cttgagtcat ttgcgcttga gattcgccca agccgacagc agaaattcta
      421 gaaacaggta cgccgttgct gaccaggttg tttgccacta cgtatgcgcg gcgttcggac
      481 agggcctgat tgtatttgtc agaacccata aagtcggtat ggccttcgac gcggacagat
      541 tggatattgg tttgacccag gcgttgcgcc aatactttca ggttgtcttg agcttcggcg
      601 cgcaatgaat ccttatcgaa accgaacagg gttttggcag acagggaaat ggtttcatca
      661 acatattgcg gagcctgctc cacaacgacg acaggagcgg gtgcgggttc gggttctggc
      721 tcgggttcgg gggcagcaac cgcatcgccg cattctacgc gaccttggct tgctttatca
      781 aagtaggcgt ttttccagca ttcgccatag ttgttgcgta cgatttcgtt cgactggccg
      841 cttacggtgt aaccctgaac ggacgcctcg cccgcaacag cagtgccgga agcgagcaat
      901 gcaacgaata atgcgcttaa tttcagctgt ttggtcattt tattccctca ttaaatttgt
      961 acagcagata cagaagcaac tgctgaattg ccaacataca ggccgctgta gaaacatggc
     1021 ggcaaatcgg atatttcagt ctccactata aagaagcagg gggaggactg tcaatactca
     1081 acgcctgaaa acaaccgtaa aacagcctgt ttcctgatag tctatcatgc cgaaaaatca
     1141 attccgtgtc attactttag ggggattttt tccatatcgc acgattgccg ttgcacaaaa
     1201 acaacaaaca caacggcaaa gccccatacc gtaccggcaa gaaaatatga taaattataa
     1261 acaatgttca gccacccgac acagacccac accgacccgc catgaaatta caacaattga
     1321 aatacgcctt agaagtttac cagcacaacc tgaacgtttc cgaagcggcc gaagccttgt
     1381 ttacttcgca acccggcatc tccaaacaaa tcaaattgct ggaagaagaa atcggcattc
     1441 agatttttat ccgcagcggc aagcgcgtgg tttcggtctc gcagccgggc aaggtggttt
     1501 tggatattgc ggaacgtatt ttacgcgatg tacagaacat taaaaatatc ggcagcgagt
     1561 ttaccggaca ggacagcggt tcgctgacgg ttgccacgac gcatactcag gcacgctatg
     1621 ccctaccctt gattgttgcc gattttgtga aacgctatcc gaaagtcaac ctgaccatca
     1681 aacaggggag ccctgccgcc atcgcacgta tggttacctc aggcgaggcg gacttggcga
     1741 ttgttacgga acggatagac gaccatcccg aactgggaaa acttccctgc tatgactgga
     1801 ctcatgcggt tatcgtaccg aacgaccacc ccttgctcga atgcagaaac cccctccgca
     1861 ttgaagattt ggcgaggttt ccgctgatta cttatgaatt tgcattcaat gcgggcagca
     1921 gcatcgcgcg ggcattttcc aaagcccgtt tggaacagcc ggatgtcgca ttggcggcgg
     1981 cggatacgga cgtattgaag acttatgtgc gcttgggttt gggcgtggga ctgatggcga
     2041 aaatggcgta caacccggat acggacggcg atttgcagct tgtggatgcg gcacacctgt
     2101 tcgagccgtc gccgacgtgg attgctttgc gcagcgatac ttatttgcgc ggatatgcct
     2161 acgactttat ccaagcgttt gcgccgcacc tgacacgcga gaaggtggat aggattctgt
     2221 acacgcccat cagcgaggat ttttcgattt aggcggctgc cggttttcag acggcacttt
     2281 gcggcagata caacaaacag gacagatgtt ttcgtctgcc ctgtgtttat tgagaatgcc
     2341 gtctgaaatg ttcgtacggg ttaatcaaat ggcgtgcgaa caaccggata ccatcttctt
     2401 caacacctgc agattgagga tcttgatgtg tttgtgttcg acggaaatca atccttcctg
     2461 atgaaattta gataatgtgc ggctgacggt ttcaagtttc agcccgagat aactgccgat
     2521 ttcttcgcgg gacattctta agatgaagtc gttggcagca aaacctcggg aataaaggcg
     2581 ttgggaaagg ttcaacagaa aggcggcaat ccgctcttcg gcgcgcatat tgcccaacag
     2641 cagcataaca ccttggtcgc gcacgatttc acgactcatc atgcggaaaa agtgggtacg
     2701 caggctgggg atattctgcc ccagttcttc gatgtgggta aacggcagtt cgcacacttc
     2761 gctgtcttcc aaggcgaccg cgtcgcaact gtgcacatgg gaacagatgc cgtccatgcc
     2821 gatgagttcg cccgacataa agaaacccgt tacctgatcg cggccgtcct gactggcgac
     2881 ggttgttttg aagaagcccg aacggatggc aaagagcgag gtaaaggctt cgccgacaca
     2941 gaacaggtat tcgccctttt tcaggcggcg gctttgacgg atgacggcat cgagttggct
     3001 gagctcgttg ggcagcagcc cgacaggcag gcagagttcc cgcaaagaac aggaagaaca
     3061 cagcgttttc atctgatgtg tagtattatg cgaagccata ccgtaccttt ttgtgcgctt
     3121 tgccccatca tgattatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgtc
     3181 cttatttaaa tttaatccac tatatgtgct tattgacaca tatcaagaca ggtttatcat
     3241 actgtggcat tctaccaaac tatccaaaat ttgactaaca tcataaaacc gcacacacac
     3301 accatgaaaa tcattcagat acagaacaat cacaatgtaa acgatgaccg ccccgagttt
     3361 gaccgcgcgc tgattgccag cctgcccgcc agcggcccgc gctacacttc ctaccctacc
     3421 gccgaccgtt tccatgacgg tttccgcgaa ggcgaatata tcaaagcttt acatttgcgc
     3481 ggtatgggcg cgttaaacaa accgctttcc ctttacattc acattccgtt ctgcaacacc
     3541 atctgctact actgcggctg caacaaaatc atcaccaaag acaaaagccg cgccgatgcc
     3601 tacatcgaat atcttgaaaa agaaatggaa ctgctcgctc cacatctgaa cggacggcac
     3661 cagcttgccc aactgcactt cggcggcggc acgccgacct ttttgagcga cgaacagatc
     3721 gaacgtgtct tccgcatgat acgcaaacat ttcgagttaa tccccaccgg cgaatactcc
     3781 atcgaaatcg acccgcgcaa agtcagccgc gacaccgtcc tcatgctcgg cagactcggc
     3841 ttcaaccgca tgagcatcgg cattcaggat ttcgacccca aagtgcaggc agcggtcaac
     3901 cgcatccaaa gttacgaaga aaccaaagaa gtcatcgatg cggcgcgcga agcggggttc
     3961 aaatccgtca gcgtcgattt gatttacggc ctgccgcacc agacttcgga aagcatcaaa
     4021 accaccatcg ataccgtttt gtcgctcgat cccgaccgcc tcgcccttta tcactacgcc
     4081 cacctgccgc acgtgttcaa accgcaacgc cgcatcgata ccgcctccgt ccccgacagc
     4141 gaagagaagc tcgatatgct gcaatactgc gtccaaaccc taaccgaacg cggctacgtc
     4201 ttcatcggca tggatcattt cgccaaacct gacgacgaac tctccatcgc cctcaaagaa
     4261 ggcttcctcc agcgcaactt ccaaggctat tcgacctacg cggattgcga tttggtcgcc
     4321 atcggcgtgt cgtccatcgg caaaatcggc agcacctatt cccaaaacga acgcgacatc
     4381 gatgcctact atgccgccat cgacgaaggc agactgccca tcatgcgcgg ttatcagctc
     4441 aatcaggacg acatcctgcg ccgcaatatc attcaggatt tgatgtgccg cttcgcgctc
     4501 gactaccgga tttacgaaag tatgttcggc atcccgttcg accgctactt caaagacgaa
     4561 ctggcggatt tggaaaaact cgccggtttg ggattggtgc gcctgaacag ccacgggctg
     4621 accgttaccc cgaaaggacg cttcctcatc cgcaacatcg ccatggtgtt cgactaccac
     4681 ctgcgccaca aggaaaccaa ggcgaaatat tcgcaaacgg tgtgattgcg tctaacgtac
     4741 aaatgccgtc tgaaaggctt tttcagacgg cattttgctg ccggcaggat aagtgttttc
     4801 aagaacaggc ggcggcatat cataacgttc cgcacctttg tgtccgaccg ttccgaaacc
     4861 aag
//
LOCUS       DAWEYF010000143         4830 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.143, whole genome shotgun sequence.
ACCESSION   DAWEYF010000143 DAWEYF010000000
VERSION     DAWEYF010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4830
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.143"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(92..574)
                     /locus_tag="WGN93_001690"
     CDS             complement(92..574)
                     /locus_tag="WGN93_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ0227577.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(727..888)
                     /locus_tag="WGN93_001691"
     CDS             complement(727..888)
                     /locus_tag="WGN93_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227578.1"
                     /translation="MSGQPEKHHTSPIEDKRKNPVYRMGRAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            complement(962..1423)
                     /gene="recX"
                     /locus_tag="WGN93_001692"
     CDS             complement(962..1423)
                     /gene="recX"
                     /locus_tag="WGN93_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ0227579.1"
                     /translation="MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1491..2198)
                     /locus_tag="WGN93_001693"
     CDS             complement(1491..2198)
                     /locus_tag="WGN93_001693"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ0227580.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKEE"
     gene            2605..3870
                     /locus_tag="WGN93_001694"
     CDS             2605..3870
                     /locus_tag="WGN93_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ0227581.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDDTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEAIIKEFQTKGFITNE
                     AGYGKEISNAELLALEVDVLAPCALENQLTSENAGKVRATIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            complement(3928..4734)
                     /locus_tag="WGN93_001695"
     CDS             complement(3928..4734)
                     /locus_tag="WGN93_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ0227582.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
BASE COUNT         1043 a         1102 c         1421 g         1264 t
ORIGIN      
        1 aatttaatcc actatatttg cttgatttca tccgtttgca atggaaacgg atggcgcgat
       61 gtgcctgtct ttcagacggc atagtccgcc gtcagcagcc gcaggacatg tcttcagagg
      121 cttgcaggct gatgtctctg cgttttttgg ctttttcgta gcggcagcgt tggcggtcgg
      181 tcaggatttc cagcggaggg acagggacgg gtttgccgtc tttgaccgca accatcgtga
      241 agtagcagct gttggtatgg cggatttcgc cggtgcggat gttttgtgct tcgacacgga
      301 tgccgatttc catcgaggtg cgtcccgtgt agttgacagc ggcgtaaaag gtaaccaaat
      361 cgccgatgtg gatgggttct ttaaacagga ctttgtcaac cgacagggta acgcaataat
      421 tgccgctgta acggctggcg caggaatagg cgacttggtc gagcaggagc aggagttcgc
      481 cgccgtgtac gttgccgctg aaattggcgg tgtccggcat catcagttcg gacataatga
      541 gttcgtgcga aggcagttgg cgttgttgtg tcatagtgta cctgttttaa gaaagggtgt
      601 tttgaaatgg gtgcggggaa attttaggga atggggaagt ggaattcaag ctaaaaaaag
      661 ctatgatggg atagtctgcc gaaatggacc gccgatgccg tctgaagcct tcagacggca
      721 ttttgtttag gaaagccaaa aacggaagac caggaaaaac acgagtgcca atacggcgac
      781 ccaaacgacg agcatgaatc cggcaactgc ccgtcccata cggtaaaccg ggtttttgcg
      841 tttgtcttcg atgggggagg tgtggtgttt ttcgggttgt ccggacattt tgttctcaat
      901 cggaaaagtt ggaaacgggc gtaaggttat gttgccgtgc aaaaagattc aagaaggaag
      961 gtcagcagcc gtcttcccaa ttttcgtccc aagcgtgttt caatgccgtc tgaacggtat
     1021 cggcatcgaa tccgcgatag gcgaggaaac gcgcctgttt ttgtttttct ttgaggtcgg
     1081 cggcggggtg tttgaatttt ttacgcaaca cggctatggc ggcctgtttt tcgcttgagc
     1141 ggtcgggaag caggttgcgg ctggtttctt catctatgcc ctgttgcgcc aaagcctgtt
     1201 tcagcctcaa tgaaccgtgt ttgcggcttt tgctgcggat ataggcttcg gcatagcgca
     1261 aatccgactg ccagttgcgt tcggcaaatt cgtttaacac gttttccaac tcctcttcgc
     1321 tttcggcgtg cggtgcaagt ttgcgtttca gaccgatgcg gctgagttct tggcgcgaga
     1381 ggatgtccat cgcgcgggcg cgtagggatt tttgcggttt catggcggcg gtttcggcgt
     1441 ggggcaggtt tcagacggca tagcggcgca aaccggagcc gtccgaatgc ctactcttct
     1501 ttgtttttct gaggttgcag gttttcgtaa atttcgggca gcgagccgat aatccagtcg
     1561 gggcgggtcg catcgtcttg cgagagcagc gtcatatcgc cgtaaccgaa ggtaacgccg
     1621 acgctcaggc agccggcggc tttggcggcg atgatgtcgt tgcgcgagtc gccgaccata
     1681 accatgtttg caacatcgat acccaaaact tcggcggcgt gccgcagcgg cagggggctg
     1741 ggttttttct cgggcaggct gtcgccgccg agtatcaggc tgaagtagtc ggcaagtccg
     1801 agctgtttca acagttcgac ggcaaggatt tcgtttttgt tggtaatgac tgccagcggg
     1861 atgcccaaag atttgagcaa tgccagcccg gcttcggttt cgggataggg gcgggtgaag
     1921 acgctcaaat ggtcgcggta gtatttcata taggatacga aacctttttc ccacagttcg
     1981 gaatcggctt cgcggtcgcg gtcgttggtg aggacgcggt gaaccagttt gccgatgccg
     2041 tcgcccacat agctttcgac cactttggcg ggcagcggtt tcataccgag ttgttccaac
     2101 atcgcttctg cggcggcggc aaggtcgggg acggaatcgc acagtgtgcc gtccaaatcg
     2161 aaggcgacgg cttggacgtg ttcgatggct gcattcataa tctgatttcc tgtcgggttg
     2221 aaagggttta ttttaacatc gtttgcacag ggcttctaat gtatagattg ttaacaatcg
     2281 caacaggttt tgcaggcggt gttttcggat ttcggggcgg aatcgggcaa gggtttgaaa
     2341 tcccagcgat gttccaatta aatttttaaa aaataaaagg atgcctatat ctttatttaa
     2401 tttgacattt atttttcgga cgcgcgcgct gctttttcag gcgaagtccg ggctgattcc
     2461 gtgcggcttg aaaaataaaa tcatatatag attaatcaaa tcgggcttat gccgactaca
     2521 cgctattaca ttttgtcggg aaattggtta tagtaatgag cgaaatgcac gcccctgaaa
     2581 atctttttgt gaaaaggaag caaaatgtct gaagcccttg caaaagaaac cctcaatccg
     2641 tttgaaatcg cgcgcaaaca ggtcaaaacc gcctgcgacc ggctaaaaac cgatccggcc
     2701 gtttatgaaa tcctgaagag tccgacccgc gtgttggaag tcaattttcc cgtcaaactc
     2761 gacgacgaca cggtcaaaac cttcacgggc taccgttcgc aacacaacaa cgccgtcggc
     2821 ccctataaag gcggcgtgcg cttccatccc ggagtgaatc tggacgaagt caaagccctg
     2881 tcgatttgga tgaccatcaa atgctgcgta gcgggcattc cttacggcgg cggcaaaggc
     2941 ggcgttacct tggatccgcg cgattattcc gaggcggaac tggaacgcat cgcccgcgct
     3001 tattccgaag ccatttctcc gctgatcggc gagaaaatcg atattcccgc acctgatgtg
     3061 aacaccaacg gcaaaatcat gtcttggatg gttgatgcct atgaaaacgt ggtgaaacat
     3121 tctgcaccgg gcgtatttac cggtaaaccg gttgagttcg gcggctcttt ggcgcgtacc
     3181 gaggctaccg gttacggcgt gaacctcgcc gccgtccaag ccttggaaaa actgggcaaa
     3241 gacgtgaagg gtgccactta cgccatccaa ggcttcggta atgtcggtta ccacacaggt
     3301 tattacgcgc atcaatccgg cgcgaaagtt gttgcggttt ctactgttga cgttgccatt
     3361 tacaacgaaa acggcttgga tatggaagca atcatcaaag aattccaaac caaaggtttc
     3421 atcaccaatg aagccggcta cggtaaagaa atcagcaatg ccgaactttt ggctctggaa
     3481 gtggacgtac ttgccccttg cgcactggaa aaccaactga cttctgaaaa tgccggtaaa
     3541 gtccgcgcga caatcgtggt cgaaggcgcg aacggcccga ctacgcccga agccgacgtt
     3601 atcctgcgtc aaaacggcgt attggtcgtg cccgatattt tggcgaactg cggcggcgtg
     3661 gtggtatctt attttgaatg ggtacaaaat ctgcaaggct attattggga gtttgacgaa
     3721 gttcaggaaa aagaaaccgt cgtcctgcgc cgtgcgttcc gcgatatatg gaacttggcg
     3781 caagagtatg atgtcgattt gcgaaccgcg tcttacatga tgagtatccg ccgtgttgaa
     3841 aaagcgatga aactgcgcgg ttggtattga tgtttgaaca aaaaatgccg tctgaagcct
     3901 tcagacggca tttttgtgcg ggcgggatta atggtgcgaa tggccgattt ggaaggttaa
     3961 agtcgagtag ttcgcctgtt tttggcacac gctttgatcg gggaagtcgg ctttgtgttc
     4021 gacattggct ttccagaagc cttggcgcaa ggggatgatg tccacttcgc ctttgtcgtc
     4081 tgtgctgtcg gagaaagcct gtgcttcggt tttgtgcgtt ttgctgcggt cgctggtgtc
     4141 gaagccgtca aaggtggcgg taacggtggc attgggcagc ggttcgccac ggaacagaac
     4201 gcggactttg aagcgttcgc ctacgtgaat gttggcggga ttgtccagcg ggacgatttc
     4261 caagttttgt ccgaccggtt tggtgatgat ggcggtgtcc gcgctttcgt gtccgacgtt
     4321 gacgatgttt ttgccgaaca ttcgggtttg ttcgcaatag cttgcgtcag gcatttcttt
     4381 gatgcccgcc tgtttccagc ctgctttgtt ttttgaccag aaagtaggct gatattcggc
     4441 gatgacgagg taactgccgt ccttaacggg acggttgctt cggtactggt agttgtatgt
     4501 gccgcgttga atcatgtttt ccttgccttt ttcggtaacc agctgcatcg gtttgctgaa
     4561 gatgtgcagg cggtctttgg cgatgggttc gagttcggga aattcgccgt agcccaagtc
     4621 ggctttaagg tattcgccgc cgtgcgtgtg ggcggtttcg acccagacgc ggtgggcgtg
     4681 ggcggatgtg gcaaataggg cggaaacggc gagcagtgtc aatgttttct tcatggtgca
     4741 gcctttgtct cgtgtgggtc aaagattttg ttatgttata acaaaatagg tatcgtgtga
     4801 agacggattt gctgtctgaa aactgtcttt
//
LOCUS       DAWEYF010000144         4579 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.144, whole genome shotgun sequence.
ACCESSION   DAWEYF010000144 DAWEYF010000000
VERSION     DAWEYF010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.144"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            24..260
                     /locus_tag="WGN93_001696"
     CDS             24..260
                     /locus_tag="WGN93_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEZ0227583.1"
                     /translation="MWIFSACSRGADPIGRPFAFVNILENPEIRSTLPLIANRPTFPQ
                     LWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            428..2203
                     /gene="ggt"
                     /locus_tag="WGN93_001697"
     CDS             428..2203
                     /gene="ggt"
                     /locus_tag="WGN93_001697"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ0227584.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            2422..2617
                     /locus_tag="WGN93_001698"
                     /pseudo
     CDS             2422..2617
                     /locus_tag="WGN93_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2684..3934
                     /locus_tag="WGN93_001699"
     CDS             2684..3934
                     /locus_tag="WGN93_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ0227585.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKLGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAVAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            4062..4510
                     /locus_tag="WGN93_001700"
                     /pseudo
     CDS             4062..4510
                     /locus_tag="WGN93_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1261 a         1138 c         1059 g         1121 t
ORIGIN      
        1 aaaggcacgc cccagtttcc ccaatgtgga ttttcagcgc gtgcagtaga ggtgctgacc
       61 caattggcag accctttgct tttgttaata tcctagaaaa cccagaaatt cgcagtactc
      121 taccactcat cgccaatcgg ccaacctttc cacagctttg ggttaatggt gagttaatcg
      181 gtggtagtga tattatccta caaatgtacc aatcaggtga gctaaaacca ctcattgaag
      241 agcatagccc aaaggtctga ttacttaata tcttaaaata aatatcaaaa aagactgctg
      301 atgacattag cggtcttttt ttgatggtca agattgatag tttggattga attatttagc
      361 catattaaat acaataatca gcatgccttg tatgaatcat caatcaaact caggcgaagg
      421 agtgcttgtg gctaaaacat atttattgac tgcattgata atgtctatga caatctctgg
      481 atgtcaagtc atccatgcca atcaaggtaa ggttaatact cattctgctg tcatcacagg
      541 tgcagacgct cacacgcctg aacatgcaac gggactgacc gaacaaaagc aggtgattgc
      601 aagtgatttt atggtagcgt cagccaatcc attagcaaca caagctggct atgatatctt
      661 aaagcaaggc ggtagcgctg cagatgcgat ggtggcggtg cagacgacac taagcttggt
      721 agagccacag tcgtcaggct tgggcggtgg tgcatttgtg ttgtattggg ataataccgc
      781 caaaacattg accacatttg atgggcgtga gacggcaccg atgcgtgcga cgccggaatt
      841 atttttggat aaagatggtc aaccattgaa atttatggaa gcggtggtcg gtggtcgctc
      901 ggtgggtacg cctgctatcc ctaaactgat ggagacaata catcagcgat acggtgtatt
      961 gccttgggga aaattatttg atacaccgat ccgcttggca aaacaaggct ttgaggtgtc
     1021 gccaaggctt gccatctcgg ttgagcaaaa tcagcagcat ttggcacgct atccaaaaac
     1081 agccgcttat tttttgccga atggtgtgcc gctacaagca ggcagcttgc tgaaaaattt
     1141 agaatttgct gacagtgttc aggcgttagc agctcaaggt gcaaaagctc tgcatactgg
     1201 taaatatgcc caaaatatcg tttcagttgt ccaaaatgct aaggataacc ccggtcaatt
     1261 atccttacaa gatttatctg attatcaagt ggtggaacgc ccgcctgttt gtgtgactta
     1321 tcgtatttat gaagtatgcg gtatgggtgc accaagctca ggtgggattg ctgtgggtca
     1381 gattttgggg attttaaatg aattttcacc caatcaggtg gggtatgatg ctgaaggttt
     1441 acgtctcttg ggcgacgctt ctaggcttgc gtttgcggat cgtgatgtat atttgggcga
     1501 ccctgatttt gtaccagtac ccattcgcca gttgatttct aaagactacc taaaacatcg
     1561 cagccagctg cttgagcagt cggataaggc attgcctagc gtatctgcag gcgattttat
     1621 tcatgagtgg gtgtcctcac aagcgattga gttaccttct accagtcata tatcaattgt
     1681 ggataaggcg ggcaatgtgc tatcaatgac gacttccatt gaaaatgcgt ttggctcaac
     1741 tttgatggca aatggctacc tgctgaataa tgagctgaca gactttagtt ttgagccaat
     1801 aaagcagggc aaacaggtcg ccaatcgtgt cgagcccggc aagagaccac gctcctcaat
     1861 ggcaccaacc atcgtattta aagcaggcaa gccttatatg gcaatcggct ccccaggtgg
     1921 tagccgtatc attggctatg tcgctaagac gattgtggca catagtgact ggaatatgga
     1981 tatccaagat gccatcagtg cacccaattt attaaatcgc tttggtagct atgaactaga
     2041 aacgggtaca accgccctcc agtggcaaca agcattaaat gatttgggct ataagactga
     2101 cgtgcgtgag ctaaattcag gtgttcaagc cattattatc gagccaagca ggctggttgg
     2161 tggtgccgat ccacgccgag aaggtcgagt gatgggtgat tagaggtgaa gcttgtattt
     2221 tgtgaatttg accgcattaa gttaatatta aaataggggg aaattgtgag taatcaaaca
     2281 aaaatacaag ccatcaagca agcttctgag cagatcttcg caatttgtga gacgccaaac
     2341 acagcattac aagccattca tctgatttta agacatggtg gggcaggaga gttgtcttgg
     2401 caagtggtgt atcagcgggt tatggctgat aaagatgtgg ttggtgctgg ttatttgatt
     2461 gattttgcac aaactgccga aaatttacca tttgatgtat tgcctttggg cagccttgta
     2521 ctaacataaa ggtaatgaga cgctaaaaac cagcatgtta aataaattac ctgataatgc
     2581 caaagaaaat ttacgcatta tggactatct gccttaggtt ttgaagtatt tttttataca
     2641 aaaaacactc atgataccct gattacacaa aggagccgag aacatgtttt caaaaagcgt
     2701 taccctcgca caatatgacc ccgatttggc agcagccatt gcccaagaag accaacgcca
     2761 gcaagaccac gtcgagctga ttgcctctga aaactacgtc agctgcgccg taatggaagc
     2821 gcaaggttcc cagctgacca acaaatacgc cgaaggctac cccggcaaac gctactacgg
     2881 cggctgcgaa tacgtcgata ttgtcgaaca attggcgatt gaccgcgtca aaaaactgtt
     2941 cggcgcgcaa tacgccaacg tccaaccgca ctccggctcg caagccaacc aagccgtgta
     3001 cgcttccgtt ttaaaactag gcgacaccat tttgggtatg tctctagcgc acggcggcca
     3061 cctgacccac ggcgcgagcg ttaatatttc cggcaaactc tacaacgccg ttacttatgg
     3121 cttggatgaa aacgaagtgc tcgattatgc cgaagtggaa cgcttggctc tcgaacacaa
     3181 acctaaaatg attgtggccg gtgcgtctgc ctacgcgttg caaatcgact gggcaaaatt
     3241 ccgcgaaatc gccgataaag tcggcgcata cctctttgtc gatatggcgc actatgccgg
     3301 tctggttgcc ggcggcgaat atcccaatcc cgtgccgttc tgcgacttcg ttaccaccac
     3361 cacccacaaa accctgcgcg gtcctcgcgg cggcgtaatt ttgtgccgcg acaataccca
     3421 cgaaaaagcg ttgaactctt ccatcttccc aagcctgcaa ggcggtccgc tgatgcacgt
     3481 catcgccgcc aaagccgtag cgtttaaaga agcgttgcaa cccgagttca aacaatacgc
     3541 aaaacaagtg aaaatcaatg ctgtcgccat ggcggaagaa ctggtcaaac gcggtttgcg
     3601 catcgtttcc ggccgcaccg aaagccacgt tttcctcgtc gacctgcaac cgatgaaaat
     3661 caccggcaaa gccgccgaag ccgctttggg caaagcgcac atcaccgtca acaaaaacgc
     3721 cattccgaac gatccggaaa aacccttcgt tacctccggc atccgcatcg gttccgccgc
     3781 catgaccaca cgcggtttta acgaagccga cgcgcgcgta ttggcgaact tggttgccga
     3841 cgtattgtct aaccccgaag acgaagccaa cctcgccaaa gtccgcgaac aagtaactgc
     3901 tttgtgcaat aaataccccg tttacggcgc gtaagccttt ttaaaaatat tccgccaagc
     3961 aatccaatgc cgcctgaaat ctcataatgt ttcaggcgga aacctttgca aaatccccca
     4021 aaatctccta aattcccacc aagacattta ggagatttct catgagcacc ttcttccggc
     4081 aaaccgcaca agccatgatt gccaaacaca tcgaccgctt cccactattg aagttggacc
     4141 aggtgattga ttggcagccg atcgaacaat acctgaaccg tcaaagaacc cgttacctca
     4201 gagaccaccg cggtcgtcct gcctatcccc tgctgtccat gttcaaagcc gttctgctcg
     4261 gacaatggca cagcctctcc gatcccgaac tcgaacacag cctcatcacc cgcatcgact
     4321 tcaacctgtt ttgacgtttt gacgaactga gcatccccga ttacagcacc ttatgccgct
     4381 accgcaaccg gcgacgcaag acgacaccct gtccgaattg ccggaactga tcaaccgcca
     4441 actgaccgaa aaaaacctaa aaatagagaa agcatccgcc gccgtcgttg acgccaccat
     4501 tattcagacc gagacctttg caaaattcct ttccctcccg acagccgaaa cccaaacaca
     4561 ggatttcggc tgttttcgt
//
LOCUS       DAWEYF010000145         4529 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.145, whole genome shotgun sequence.
ACCESSION   DAWEYF010000145 DAWEYF010000000
VERSION     DAWEYF010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.145"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(86..1024)
                     /locus_tag="WGN93_001701"
     CDS             complement(86..1024)
                     /locus_tag="WGN93_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227586.1"
                     /translation="MLELNGLCKRFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIQLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEVHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRGTLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVARLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(1033..1908)
                     /locus_tag="WGN93_001702"
     CDS             complement(1033..1908)
                     /locus_tag="WGN93_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ0227587.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGKRSPHKAVDPDK
                     LDNIAAGGVSGGEMPSEAVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2090..2166)
                     /locus_tag="WGN93_001703"
     tRNA            complement(2090..2166)
                     /locus_tag="WGN93_001703"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2130..2132),aa:Met,seq:cat)
     regulatory      2316..2415
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2506..4407
                     /gene="thiC"
                     /locus_tag="WGN93_001704"
     CDS             2506..4407
                     /gene="thiC"
                     /locus_tag="WGN93_001704"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ0227588.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGAEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGSNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKSEYAKLLKQHAGQSFGANIPTRPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTADRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFTELHTLGELTSKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1104 a         1300 c         1196 g          929 t
ORIGIN      
        1 ttgcagccct gataaaaaat atggctgctt tggtaaaaaa tgccgtctga aaggttttca
       61 gacggcattt tgtttttaag aagcatcagc ggaagcggac gatttccctg tcttcgatat
      121 ggatgcgtac cgtatcgttt cccgatattt caccggcgtg cggcatatcg aggttcagcc
      181 acaggatgcc gtgttccgga tggaggacgg acaggctgaa cgattcgggc aaacaggtac
      241 gggataatac gcggcactcc atgccgtctt ggtcgaaacg caccgcatgt tgcggaatat
      301 ggcggtcatc gtcggtattg ggcaaaccca tcagtcgggc gacctgcacg ccggcaggcg
      361 tttgaaccaa ggtttcgggc gtaccgcatt gaaggatttt cccctcgtgc atgacggcga
      421 tttcgtccgc cgccgtgcag gcctcttcgg gcgaatgcgt taccaaaacg gcagggatgc
      481 cgcccttgcg gatgcgttcg gcagtcatgc ggcgcagcgt gccgcgcaaa tgcgtgtcca
      541 aactggaaaa cgattcgtcc aacagcagca gggaagggcg gacaaccaaa gcgcgcgcca
      601 gtgccaaccg ttgtttctcg cctccggaaa gtttttcagg cttgcggtgc acctcgtttt
      661 ccagtccgac ttcggcaagt gccgccatgg caaggcgttc ggcttcggct ttcggcattt
      721 tttgcatttt caaaccgaat gccgcatttt ccagcgcact catatgggga aacagcgcgt
      781 aatcttgaaa catcagcgaa atacggcgtt tttcgggcgg catacgggta atgttttccc
      841 cgttcagctg aatttcgccg ccgtccggcc ggacgatgcc cgcaatcata ttcagcaggg
      901 tggattttcc gcagcccgac cgccccagta cggcgagtat tttgccgcgc ccgacagtca
      961 ggcagatgtt gtcggcaacc gttttgccgc cgaagcgttt gcagagtccg ttcagttcaa
     1021 gcatggcgca tcctataaac gtatgccgtc cagccactcg gacagcggat gggcggcatc
     1081 aatcagaccg taacggcaaa acgcgtccag cgtaaccagt tgcgcgtcgt gcatcatgtt
     1141 tcccgacaac atggtggcaa ccaagctgcc gatgtccatt ttttcaaaac acgcaacctc
     1201 gccgtcctga ttttcaggca ggaaggtttc gggtaggacg gcatcgaata catacaggat
     1261 ttcattgtgc acaccccggc tgacggggcg caggctgtgc agccgagata ccggacggat
     1321 aaacggaaac agcgttttat ccaaaccggc ttcttcgctg ctttcgcggc acacggcttc
     1381 agacggcatt tcgccgccgg aaacaccgcc ggcggcaata ttgtcgagtt tgtcgggatc
     1441 gactgctttg tgcggactgc gcttgcctat ccagaaatgc catcggccgt ccgattcggt
     1501 cagtccgttg agatggacgg cgcggctgag cagtccgaac ggacggaaag cggcgcgttc
     1561 gagcgtgaac aaggggttgc cgccgccgtc ggtcaggtcg aaacactcgt tgcgccatcc
     1621 gtgaagcagc cccgccttgt tccatgtgcg ggcgaggtgc tgcaagcggc cgcccatatc
     1681 tgaccagccg tccgcattca ggaaaatgcc gtctgaagac tccgagcagc ctgcctccca
     1741 gtcttttttg acgcgctccg cccattccgg cgacagattg cccaaaggca gacggttcag
     1801 atacagcgtt ttccagcaac tttctgcacc gtaacttgct tttgcccact cgaacagggc
     1861 atcaaggtcg tgtttgctga cggattcggt aaaacggacg gtcggcatag tcggctttct
     1921 tgaagacaat gcggaagatt gtagccaaac tgcctgaatt tgcaaccgca aacagacggc
     1981 gggctgccgt tccgatattg cggcaggaag gaaaatccgg caaaaaacgg aggcggcagg
     2041 aaacaggcaa aacaaaaccc ctcggcattg aaccgagggg tttgatattt ggttgcggga
     2101 gcaggattcg aacctacgac cttcgggtta tgagcccgac gagctaccat gctgctccat
     2161 cccgcgtcag aagatgaaac tatacggcag attttttatg ttgtcaaaca ttatttccgc
     2221 gaaaaatcat aaaattttgc cgtccggtgg tttatgcctg atttgaaata ttattttctt
     2281 tacaaaagtt catgttcgtg atttaatttt ggttaacatt gaaacagggg tgctgcatga
     2341 tgttcaggcg gctgagaaat accctttaca cccgatctgg ataatacctg cgtggggagt
     2401 tttcacggat tctgcttttc agacggcatt ggttttcaaa tgccgtctga aaacgcaaaa
     2461 cgctcctgtt tctttattct aaacgagaaa acaggagcat tttttatgac tacgccaaaa
     2521 aaaaccgcca aaacttccgg caacgaagcg cgcgaacttg ccgacttgag cgaagacatc
     2581 ggtatccgct tcaaatatcc gaactcggaa cgcgtgtatc tgcaaggcag ccgcgacgac
     2641 atccgcgtgc ctttgcgtga aatccgtcag gacgacacct atacggcgca aggcgcggaa
     2701 gccaacccgc cgattcccgt ctatgacacc agcggcgtgt acggcgatcc agcggcacac
     2761 atcgacctga aacaaggtct gccgcacatc cgcaccgcat ggctgaacga acgcggcgat
     2821 accgaaatcc tgcccaagct ctccagcgaa tacggcatcg aacgcgcaca cgatccgaaa
     2881 accgcccatc tgcgcttcaa ccaaatcacc cgcccgcgcc gcgcgaaaag cggtagcaac
     2941 gtaacccagc ttcactacgc gcgccaaggc attatcacgc ccgaaatgga gtttgtcgcc
     3001 atacgcgaac gtttaaaatt agacgaattg tcccaaaaat cggaatacgc caaactcttg
     3061 aaacaacacg cagggcaaag tttcggcgcg aacatcccaa cccgtcccga ccaaatcacg
     3121 cccgaattcg tgcgccaaga aatcgccgcc ggacgcgcga ttatccccgc caacatcaac
     3181 caccccgaac tcgaaccgat gattatcggc cgcaacttcc gcgtcaaaat caacggcaac
     3241 ttgggcaatt ccgccgtcac ttccagcctg accgaagaag tcgaaaaaat ggtgtggtcg
     3301 ctgcgttggg gcgcggacac aattatggac ttatccacag gcgcgcacat ccatgaaacg
     3361 cgcgaatgga ttatccgcaa cgcgcccgtc cccatcggca ccgtgccgat ttaccaagcg
     3421 ttggaaaaaa ccggcggcat tgccgaagat ttgacttggg atttgttccg cgacacctta
     3481 atcgagcagg cggaacaagg cgtggactat ttcaccatac acgcaggcgt gttgctgcgt
     3541 tatgtgccga tgactgccga ccgcctcacc ggcatcgtat cgcgcggcgg ttcgattatg
     3601 gcgaaatggt gtttggcaca tcatcgggaa aacttccttt acacgcattt cgacgaaatc
     3661 tgcgaaatta tgaaggcgta tgacgtatcg ttcagcctcg gcgacggttt gcgtcccggc
     3721 tgcattgccg atgccaacga cgaatcccaa ttcaccgagc tgcacacctt gggcgaattg
     3781 acctccaaag cgtggaaaca cgacgtacag gtgatgatcg aaggtcccgg ccatgtaccg
     3841 ctgcaacgcg tcaaagaaaa tatgaccgaa gagttgcaac actgttttga agcaccgttt
     3901 tacaccctcg gcccgctcgt taccgacatc gcccccggct acgaccacat cacctcgggc
     3961 ataggcgctg ccaatatcgg ctggtacggc acggcgatgc tctgttacgt tacccccaaa
     4021 gaacatttgg gactgcccga caaagaagac gtgcgtaccg gcatcatcac ctacaaactc
     4081 gccgcccacg ccgccgacct cgccaaaggc tggccgggcg cacagttgcg cgacaacgcc
     4141 ctgagcaagg cgcgtttcga gttccgctgg cgcgaccagt tccgcctaag cctcgacccc
     4201 gaacgcgccg aaagcttcca cgacgaaacc ctgcccgccg aaggcgcgaa aatcgcccac
     4261 ttctgttcga tgtgcggccc caaattctgc tcgatgaaaa tcacgcagga agtgcgcgac
     4321 tacgccgaca agcaaaaagc ccaacggcag ggcatggagg aaaaagcggt cgagttcgtc
     4381 aaaaaaggag cgaagattta cagctaaaac gtcaagcaaa aaatgccgtc tgaaacccgg
     4441 aaaaaaggct tcagacggca ttctttcgct tgtgaaaata tagtggatta acaaaaatca
     4501 ggacaaggcg acgaagccgc agacagtac
//
LOCUS       DAWEYF010000146         4528 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.146, whole genome shotgun sequence.
ACCESSION   DAWEYF010000146 DAWEYF010000000
VERSION     DAWEYF010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.146"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(57..1850)
                     /locus_tag="WGN93_001705"
     CDS             complement(57..1850)
                     /locus_tag="WGN93_001705"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ0227589.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAEAQGRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNTESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2095..3204
                     /gene="proB"
                     /locus_tag="WGN93_001706"
     CDS             2095..3204
                     /gene="proB"
                     /locus_tag="WGN93_001706"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ0227590.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3217..4479
                     /locus_tag="WGN93_001707"
     CDS             3217..4479
                     /locus_tag="WGN93_001707"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ0227591.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRQDLEAAAGNIPESMTDRLLLDGKRICAMADGIRAVTALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYINASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1039 a         1249 c         1247 g          993 t
ORIGIN      
        1 ccgcaatgcc gtctgaagcc tttttatgct tcagacggca tcgtctgttt tcacgctcaa
       61 atcgtaccgc tgccttgcgc tttcggtttg gcggcactaa attccagttt gctcaaagcg
      121 gaaaggtagg ctttggcagt ggcaaccaaa acgtcggtat ccgcgccctg accgttgacg
      181 acgcggttgc cgcgtgccag acggacgctg gtttcgcctt ggctttccgt accttgcgtg
      241 acggcattga cggaataaat ctgcaaagtc gcgccgcttt gcgccacgct ttcaatcgct
      301 ttgaaaattg catcaaccgg gccggaaccg gttgcggaag cgcgtttttc ttcgcctttg
      361 atgctgaaca cgatgtcggc gcgcggctct tcgccggttt cggtactgat tttttgggaa
      421 atgaatttgt agctttcggt attcatattg cccatttcgt ccgacaccag cgcgtgcagg
      481 tcttcatcga agatttcgcg ttttttgtcg gcgagttctt tgaagcgtgc aaatgccgcg
      541 ttcagtgcct cttcgctttc caactcgatg cccaaatccg ccagcttggt tttgaaggcg
      601 ttgcggccgg acaatttgcc caagctcaat cggttagccg accaaccgac cgattcggca
      661 gacataatct cgtaagtttc gcggtgtttc agcaccccgt cctgatggat gcccgattca
      721 tgcgaaaagg cattggcacc gacaatggct ttgttgggct gcacgggata gcccgtaatg
      781 gtggacacca gtttggacga aggcacgatt tgcgtggtat cgatgccggt ttccaagccg
      841 aacaagtcgt ggcgcacttt caacgccatc acgatttctt caaccgaagc attgcctgca
      901 cgttcgccca agccgttgac agtacattcc acctgacgcg cgccgccttt taatgcggca
      961 agcgaattgg caaccgccaa gcccaaatca ttgtggcagt gtgccgacca aacgactttg
     1021 ccgccgttgg gcgttttggc aatcagttcg cggaaaaatt cttcggtttt gtacgggatt
     1081 gaatagccga cggtatcggg aatattgatg gtggtcgcgc ccgcttcaat caccgcgccg
     1141 cagatttcgg caaggaaatc gatttccgaa cgcaacgcgt cttcgcagga aaattccaca
     1201 tcgtcggtgt attcacgagc gattttcacc gctttgaccg ccgcctcaat cacctgcttc
     1261 ggcttcatct tcaatttgta ctccatatgg atggggctgg tggcgatgaa ggtgtggatg
     1321 cgttttttcg gcgcgggcgc aacggcctca cccgcctgac ggatgtcccg ctcgatggcg
     1381 cgggacaatg aacagaccgt tgatttggta atggttttcg caatcgcatt gaccgcctcg
     1441 aaatcgcccg ggctggcagc ggcaaaaccc gcttcgatga tgtccacacc caatttttcc
     1501 agctggcggg cgacgcggat tttttcctct ttggtcatag cggcgccggg cgactgctcg
     1561 ccgtcgcgca gggtggtatc aaaaataatt acgcggttgg tctgtgtcat ttctgttctc
     1621 tccagagatt cgtttttttg taaaaaagca ttcaaatcca gcggcctgcc ttgcgcttcc
     1681 gccaacgcgg tcagcttttg cagttgcgcc agaggcagcg agccgcgcgt gcgccattta
     1741 tagatggcgg cggtcgtcgc ggcattttcg ggatcgtgct gtttcaacgc ttcggcaagc
     1801 gcgttcacgc cgccgaaata agcaaccaag cggtctatat ctaattgcat ggtagtcctt
     1861 gtctaaaata aatcagccta cagcagaaat atggacagga ttatacgcat tttggacaaa
     1921 acggcaatat aaatttgaaa aatctcaata agccgccata gattttatta attttataca
     1981 ttttgtccat tttattgcag acgcggcgtg attgttgaca attgcggcag aacagggcaa
     2041 attcggcggc acaaggtggc aacgagacag gacaaaccaa caaggacgga aacaatgaaa
     2101 tacaaaagaa tcgtatttaa agtcggcaca tcttcgatta cccattcgga cggcagtctc
     2161 tcgcgcggca aaatccaaac catcacccgc cagcttgccg cattgcatca tgcgggacac
     2221 gagctggtct tggtgtcttc cggcgcggtt gcggcagggt tcggtgcgct gggtttcaaa
     2281 aaacgtccgg tcaaaatcgc cgacaaacag gcttccgccg ccgtcgggca ggggctgctg
     2341 atggaagaat atacggcaaa cctgtcttca gacggcatcg tgtccgcaca aatcctgctc
     2401 agccgcgccg actttgccga caaacgccgc taccaaaatg ccggcggcgc actttccgtg
     2461 ctgctgcaac gccgcgccgt ccccatcatc aatgaaaacg atacggtttc ggttgaggaa
     2521 ttgaaaatcg gcgacaacga cacattgagt gcgcaagtgg cggcgatgat acaggcagac
     2581 ctcttggtgc tgctgaccga catagacggt ctttacaccg gcaacccgaa cagcaatccc
     2641 gatgccgtac ggctggacaa aatcgaacac atcaaccatg aaatcatcga aatggcgggc
     2701 ggatcgggtt cggcaaacgg cacgggcggt atgctgacca aaatcaaagc ggcaaccatc
     2761 gccgccgaat ccggcgtacc ggtgtatatc tgttcctcgc tcaaacccga tgcacttgcc
     2821 gaagctgccg aacatcaggc ggacggctcg tttttcgtcc cccgtgccaa aggtttgcgg
     2881 acgcagaagc aatggctggc gttctattcc gaaagccggg gcagcgttta tgtggacgaa
     2941 ggtgcggaac acgctttgtc cgaacagggg aaaagcctgc tgatgtcggg cattgccgga
     3001 atcgaagggc atttttcccg tatggacacc gtaaccgtgt acagcaaggc aaccaaacag
     3061 cccctgggca aagggcgcgt cctgttcggt tctgccgccg ccgaagacct gctcaaatcg
     3121 cgtaaggcga aaggcgtgtt catccatcgg gacgactgga tttccatcac gcccgaaata
     3181 cgcctgcttc tgaccgaatt ttagaaaagg aaacccatgt caaacacaca aaaacagctt
     3241 gcccttgcca aagcggcaaa aaaatccgtc aacacggcgg atacggaaga aaaaaaccgc
     3301 gcgctgcttg ctatggcgga cagtctggaa gcggcggcgg cagatatttt ggcggcaaac
     3361 cgtcaagact tggaagccgc ggcaggcaac attcccgaaa gcatgaccga ccgccttttg
     3421 ttggacggca aacgcatttg cgcgatggcg gacggcatta gggcggttac cgcactgccc
     3481 gaccccgtgg gcgaaatact ggaaacctcg actctgccca acggcttgga aatcgtcaaa
     3541 aagcgtgtgg cgatgggcgt tatcggcatt atttacgaaa gccgcccgaa cgttacgtcc
     3601 gatgcggcgg ctttggcact gaaaagcggc agcgcggtcg tactccgcag cggcaaagat
     3661 gcattccaat ccgcacgcgc catcgttgcc gccctgaaaa cggggttggc acaaacccgc
     3721 atcgaccccg acgcgctcca gttgattgaa gacaccgggc gcgagggcag ttacgaaatg
     3781 atgagggcga aagattatct agacctgctg attccgcgcg gcggggcggg gctgatacgg
     3841 gcggtggttg aaaatgccgt cgtgccggtc attgaaacgg gaacgggcat cgtccacatt
     3901 tatatcgaca aggacgcgga ttgggacaag gcgctccgta tcgtgtacaa cgccaaaacc
     3961 agccgtccgt ccgtgtgcaa ctcgatggaa gtgctgctgg tgcatgaaga cattgctgcc
     4021 gacttcctgc ccaagctcga acggctgttg gttcgcgacc gtatagaagc cggactgccg
     4081 cccgtccgct tccgtttgga tccgcaggcg gcgcggcata tcggcggcga agcggcgggt
     4141 gcagacgatt tcgataccga gtttttagac tacatcctcg ccgtgaaaac cgtcgcttcg
     4201 gtcgaagagg cggtcgggca catcgaaacg cacggcacgc accattcaga cggcatcgtt
     4261 accgaaaacc gccacgctgc ggactatttc acgacccata tcgattctgc cgccgtgtat
     4321 atcaacgcgt ccacgcgctt taccgacggc ggcgaattcg gcttgggttg cgaaatgggc
     4381 atctccacgc aaaaactcca cgcccggggc ccgatgggtt taaaagagct gacgagttac
     4441 aaatacatcg tacaaggcac gggacaggtt agggaataat ccgaattcaa acgtctgata
     4501 tagtggatta actttaaacc gatacggc
//
LOCUS       DAWEYF010000147         4523 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.147, whole genome shotgun sequence.
ACCESSION   DAWEYF010000147 DAWEYF010000000
VERSION     DAWEYF010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.147"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            40..463
                     /locus_tag="WGN93_001708"
                     /pseudo
     CDS             40..463
                     /locus_tag="WGN93_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            569..1132
                     /gene="pgsA"
                     /locus_tag="WGN93_001709"
     CDS             569..1132
                     /gene="pgsA"
                     /locus_tag="WGN93_001709"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ0227592.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NILMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1212..1287
                     /locus_tag="WGN93_001710"
     tRNA            1212..1287
                     /locus_tag="WGN93_001710"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1245..1247,aa:Gly,seq:gcc)
     gene            1313..1388
                     /locus_tag="WGN93_001711"
     tRNA            1313..1388
                     /locus_tag="WGN93_001711"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1346..1348,aa:Gly,seq:gcc)
     gene            1412..1487
                     /locus_tag="WGN93_001712"
     tRNA            1412..1487
                     /locus_tag="WGN93_001712"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1445..1447,aa:Gly,seq:gcc)
     gene            1509..1584
                     /locus_tag="WGN93_001713"
     tRNA            1509..1584
                     /locus_tag="WGN93_001713"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1542..1544,aa:Gly,seq:gcc)
     gene            1610..1683
                     /locus_tag="WGN93_001714"
     tRNA            1610..1683
                     /locus_tag="WGN93_001714"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1642..1644,aa:Cys,seq:gca)
     gene            1786..1875
                     /locus_tag="WGN93_001715"
     tRNA            1786..1875
                     /locus_tag="WGN93_001715"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1820..1822,aa:Leu,seq:taa)
     gene            1979..3031
                     /gene="sohB"
                     /locus_tag="WGN93_001716"
     CDS             1979..3031
                     /gene="sohB"
                     /locus_tag="WGN93_001716"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ0227593.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDHLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3082..4007)
                     /locus_tag="WGN93_001717"
                     /pseudo
     CDS             complement(3082..4007)
                     /locus_tag="WGN93_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201178.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
     gene            complement(4061..4492)
                     /locus_tag="WGN93_001718"
     CDS             complement(4061..4492)
                     /locus_tag="WGN93_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ0227594.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTE
                     SAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1134 a         1069 c         1175 g         1145 t
ORIGIN      
        1 tatcgctggg tatggtttgc cgccataagc tgtctgctgt tgtccgccgt ttttattgca
       61 ccttacctga cggcatttca cgaacaagaa aaaacattcg aatatgcgga attgaccgtt
      121 accgccctca accgcagcgg acgggcaatc aaactggatg cagacgggca gcattaccgg
      181 ctttcctgct atgggttcga cagtttgtgc acaggcggca atatcggcag aaccatcagg
      241 gcggagcagg ttagagccgt tttaagcgaa accgtcggca aaggtttttt aaacggcgtt
      301 ctgttggaat accgcaacag tggcagtgtc tataagcaat aaagattttg cccgcacgga
      361 agaccgcctt gtcgaagtgt tggcacaacc tgccgttttc tgcctgaaac tgggtatttt
      421 gcttttattg cccgccattt tcctgcgttt gaaaagaatg tgaaaacaga ttggcggggc
      481 gggggaatgc ccatgcagca attttacgtt ttgggttatg aggataaccg ttataatcac
      541 aactttacag tctgcacaga gaaaaccgat gccttggaat ctccccatct tcctcacatg
      601 gttgagggtc ttgctcattc ctgtcatgac agcccttttt tacctgcctt ttccgtggtt
      661 cgcggaggaa acgattaatc tcaccgccgc cgtcattttt gccgttgccg ccttaaccga
      721 ctggtttgac ggatttttgg caagactgtg gaaacagact tccgatttcg gcgccttcct
      781 cgatcccgtc gccgacaagc tgatggttgc cgtatcgcta cttttactgg tcaaactcga
      841 ccggacctat gttttgtttg ccatgatcat tatcggcagg gaaattacca tttccgcatt
      901 gcgcgaatgg atggcgcaaa tgggcaaaag gaacagcgtt gccgtcgcca ccgtcggtaa
      961 gttcaaaacc gccgcgcaaa tgctggcaat tttcctgctg ctgctgaata ttcccgattt
     1021 ttacggattt aatcttgttg ttatcggcaa catattgatg tttatcgcat ctttgctgac
     1081 agtctggtcg atgctgtatt atctgaaaat ggcgtggaaa gaaatcgcct gaaaaaaaca
     1141 taaaaatagc ttgacggcaa aaacagaatc cataataatt gcgtctcttc gatgttggag
     1201 aatgaaatcg ggcgggaata gctcagttgg tagagcgcaa ccttgccaag gttgaggtcg
     1261 cgagttcgag actcgtttcc cgctccaaaa atttcatttt cccacaatca ttgcgggaat
     1321 agctcagttg gtagagcgca accttgccaa ggttgaggtc gcgagttcga gactcgtttc
     1381 ccgctccaag ttttatttca aacatatcaa cgcgggaata gctcagttgg tagagcgcaa
     1441 ccttgccaag gttgaggtcg cgagttcgag actcgttttc cgctccaaaa accgatatgt
     1501 ttgaacgcgc gggaatagct cagttggtag agcgcaacct tgccaaggtt gaggtcgcga
     1561 gttcgagact cgtttcccgc tccaagtttt ttagataagc cagttttagg gcgagatagc
     1621 aaagtggtta tgcagcggat tgcaaatccg tctacgccgg ttcgattccg actctcgcct
     1681 ccattatcgt actatggcgg ggtggcagag tgtttatgct atgaggagtg caatcttcat
     1741 ataggccggt taaaatccgc gcccccgcct ccacctttca caaatgcccg ggtggtgaaa
     1801 taggtagaca caacggactt aaaatccgtc gggactaaac atcccgtgcc ggttcgattc
     1861 cggctccggg caccaagctg gaaatgacaa taccgctcca agcggttatt tttttatctg
     1921 tcggacggtg atggacaata ttgacatgtt catgcctgaa caagaggaaa tccaatcaat
     1981 gtggaaagaa attttactga attacggtat tttcctgctc gaactgctta ccgtgttcgg
     2041 cgcaattgcg ctgattgtgt tggctatcgt acagagtaag aaacagtcgg aaagcggcag
     2101 tgtcgtactg acggattttt cggaaaatta taaaaaacag cggcaatcgt ttgaagcatt
     2161 ctttttaagc ggggaagagg caaaacatca ggaaaaagag gaaaagaaaa aggaaaaggc
     2221 ggaagccaaa gcagagaaaa agcgtttgaa ggagggtggg gagaaatctg ccgaaacgca
     2281 aaaatcccgc ctttttgtgt tggattttga cggcgatttg tatgcacacg ccgtagaatc
     2341 cttgcgtcat gagattacgg cggtgctttt gattgccaag cctgaagatg aggttctgct
     2401 tagattggaa agtccgggcg gcgtggttca cggttacggt ttggcggctt cgcagcttag
     2461 gcgtttgcgc gaacgcaata ttccgctgac cgtcgccgtc gataaggtgg cggcgagcgg
     2521 cggttatatg atggcgtgtg tggcggataa aattgtttcc gctccgtttg cgattgtcgg
     2581 ttcggtgggt gtggtggcgg aagtaccgaa tatccaccgc ctgttgaaaa aacatgatat
     2641 cgatgtggat gtgatgacgg cgggcgaatt taagcgcacg gttactttta tgggtgaaaa
     2701 tacggaaaag ggcaaacaga aattccgaca ggaactggag gaaacgcatc agttgttcaa
     2761 gcagtttgtc agcgagaacc gccctcaatt ggatattgag gaagtggcaa cgggcgagca
     2821 ttggttcggt cggcaggcgt tggcgttgaa cttgattgac gagatttcga ccagtgatca
     2881 tttgttgttg aaagcgtttg aaaacaaaca ggttatcgaa gtgaaatatc aggagaagca
     2941 aagcctgatc cagcgcattg gtttgcaggc ggaagcttct gttgaaaagt tgtttgccaa
     3001 acttgtcaac cggcgggcgg atgtgatgta gtttgccgaa cggatggaaa tgccgtctga
     3061 agcgtgttca gacggcattt ttcaagttcc ggctttgatg ttccgttccg accactctat
     3121 ccgttgtccg atgtctttca aattggaata ttgttcgacc aatcgcggca cgtcgtccaa
     3181 actcatggca aacatccaca gataagtgcc gaccgaatag acatgccccg cgctgctgta
     3241 gcctttgagc gtcatcatca caaaagcaaa gccgaacaaa atacccatcg ccgtgccgac
     3301 gcagagatag ccgaaggctt cgcggttgga aatcagcaca cgcaggcgcg caagcagtcc
     3361 gtaatggcgg tacagctgcc gccggtcgcc ttttcggata aagtggttgt cgcgttccaa
     3421 gctgttcttc aggcggaaat acaggttttc gctgatggcg gcaaaacgtg gcaaaagcca
     3481 taaaaacaac gcaagtatgc ccaccgccga cacgccgacc caaaattcca gcaccagcag
     3541 catgatgcac gcgccgaata tggatacgac ggatgtcgcg gcaatcggca ggtgttcttc
     3601 aaaaaagctg acaaactcac gcgacagggc aacccgtgca gttatagtgg attaacaaaa
     3661 atcaggacaa ggcgacgaag ccgcagacag tacaaatagt acggcaaggc gagacaacgc
     3721 cgtactggtt taaatttaat ccactatatt gccgaatgcg ggacttaccg ctgccgctgt
     3781 tccaacacaa ccggcacggc gatttcggta taaatccgcg taaacgtgcg tgtatcggca
     3841 atccgccgcg ccgcaccgac cagccacatt aaaagcacaa ccaaagcgta cagcaacgcc
     3901 tgccacacct tccccgcaat tacggcatta attgcccagc cgccaaacac cggatacacc
     3961 agcatcaaaa ggttttccag tccgaccaga aaaaatgtgc caatcaatcg cttgcggtgg
     4021 ttttggctat gtgtttcaac attttccaca tctttgctcc ctatttttta ttttccgaga
     4081 ttgttttttc catcacttcc gccagtgcat ccaaatcggc aaacagccga gttgtgcgct
     4141 tgtcgccgaa tgtggcaaat actttgtcgc tgaattcctg cgcgctttct gttaaaggtg
     4201 cggcataggc tttgcctgtt tcggtcaacg acagcaaccg tttgcgccgg tcctgttcgc
     4261 cttcctgcca ttcaatcaac ccttgtccgg caagggtttt gcatacgcct gaaacggtct
     4321 gtttgggcag gctccacttt tcgccgatat gcttttgcgt gcggctgcct tcggttgcca
     4381 gggtataaag tacggcaaag aggttgtaat tcagatcctg ctgcccaatc catttgtcga
     4441 agacattgca aatcaggttg atacgggtgc caagttggtc gagttggttc ataattggtc
     4501 ttgatattga ctaaatttgt gcg
//
LOCUS       DAWEYF010000148         4522 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.148, whole genome shotgun sequence.
ACCESSION   DAWEYF010000148 DAWEYF010000000
VERSION     DAWEYF010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.148"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..251)
                     /locus_tag="WGN93_001719"
     CDS             complement(<1..251)
                     /locus_tag="WGN93_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
                     /protein_id="HEZ0227595.1"
                     /translation="MEDKQGMTKAVVGVMTDALADGRKPATASNLPPLSNRRGTETET
                     AGRVQEVFECYEMYITDGKGNLLGVPLRRGVSDSAFIDQ"
     gene            complement(323..568)
                     /locus_tag="WGN93_001720"
     CDS             complement(323..568)
                     /locus_tag="WGN93_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227596.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRPLYIASLRRDD"
     gene            complement(569..865)
                     /locus_tag="WGN93_001721"
     CDS             complement(569..865)
                     /locus_tag="WGN93_001721"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227597.1"
                     /translation="MLLKVVPERTVSADAKTRDPMWDNAALQTSEGVNFIARFLGFFS
                     DGEYRYVDVLQPNHSDIIRYSGKDFPINQILNHIHLARYAVTFENNVDSKLRRH"
     gene            complement(856..1209)
                     /locus_tag="WGN93_001722"
     CDS             complement(856..1209)
                     /locus_tag="WGN93_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227598.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            1445..2872
                     /locus_tag="WGN93_001723"
     CDS             1445..2872
                     /locus_tag="WGN93_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ0227599.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            2941..4344
                     /locus_tag="WGN93_001724"
     CDS             2941..4344
                     /locus_tag="WGN93_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ0227600.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
BASE COUNT         1145 a         1113 c         1183 g         1081 t
ORIGIN      
        1 atttggtcga tgaaagccga atcggataca ccgcgcctaa gaggaacgcc taacaggttt
       61 cctttaccgt ccgttatgta catttcgtaa cattcgaaga cttcctgaac cctgcctgcc
      121 gtttcggttt ctgtacccct cctgttagat aaggggggaa gatttgaagc ggttgccggc
      181 ttcctgccgt ccgctaacgc gtccgtcatc acgccgacaa ccgcctttgt catcccttgc
      241 ttatcttcca tggtgcgaat cctcaaaaac aggcaaaaaa aaagccctgt tacttgtaga
      301 aagtaaagga cgttaatttt tgttaatcgt cccttcttag ggacgcaata tataagggac
      361 gcaatatata aggttttaaa acgctaagaa caaaatccga taacggctct gaagaagtaa
      421 gtctttcttt attgcacaag atagcaaact tccacggcat tctcgcccca cccgtgccgt
      481 ccaagccttt ttcaaagaca tagatggttt tcttggcaat cacttcgtca gtttggcggt
      541 cgataatccg tatggtcgca cctgccactc agtgcctgcg cagcttggaa tcgacattgt
      601 tttcgaacgt taccgcataa cgggcgaggt gtatatgatt aagtatttga tttatcggaa
      661 aatctttacc tgaataccga ataatatcgg aatggttggg ttgcaggaca tccacatagc
      721 ggtattcccc atcgctaaaa aatcctagga aacgagcaat aaaatttact ccttcgctgg
      781 tctgtaaagc cgcattgtcc cacatcgggt ctctggtttt tgcatctgcc gaaacggtac
      841 gctcaggtac taccttcaac agcataatcc cttccacatt gtccgccgtc tggtaaatct
      901 ttcccccgcc gttttgcatt gttcgttaaa cacggcttcg gcttctttgt attttctgtc
      961 ccactcttct tgtgcctgta tttcttcttt gatcgggccg aattgtttgg gaataatcca
     1021 aacaaacagc atcaggatag cggcggcggt caggctgcct gaaaggattt tgccggggtt
     1081 ccgtttgggc tttttatagg caaagcggac gagaaaccaa agcaacagca gcatggtgcc
     1141 ccaatagccg attgagaata ggatggccaa accttctagg aaatggcgta aatcgtttgt
     1201 ggtaaacatg ggttgttcct gtggttaaat gtgcaggctg ctttttgccg aatcttgccg
     1261 catctcaaaa gcagcctgcg cttcagcgtt gcgttacgca gtaaaataat gaatatttgt
     1321 aacgacttgg gtattttttg tcaatattcc cgcctttccc ttaacagctg ccgcgctttc
     1381 cgttaaaatt cctttacata tttatattgt ttcctgtttc tatattgcca aggttatacc
     1441 cgttatgttt ttctccgccc tgaaatcctt tctttctcga tacattactg tatggcgcaa
     1501 tgtttgggcg gtgcgcgacc agttggaacc gcccaaacgc acggcggaag aacaggcgtt
     1561 tttgcccgcg catttggaac tgaccgatac gccggtctct gccgctccga aatgggcggc
     1621 gcgttttatt atggcgtttg cgcttttggc tttgttgtgg tcctggttcg gcaaaatcga
     1681 tattgtggcg gcggcttcgg gcaaaacggt gtcgggcggg cgcagcaaaa ccatccagcc
     1741 gctggaaacg gcggtggtta aggcggtaca tgtgcgcgac gggcagcatg tgaaacaggg
     1801 agaaacgctg gcggaactgg aggctgtggg aacagacagc gatgtggtgc agtcggagca
     1861 ggctttgcag gctgcccaat tgtccaaact gcgttatgaa gcggtattgg cggcattgga
     1921 aagccgtacc gtgccgcata tcgatatggc gcaagcacgg tctttaggtc tctccgatgc
     1981 cgatgtgcaa tcggcgcagg tgttggcgca gcaccagtat caggcatggg cggcgcagga
     2041 tgcgcaattg cagtcggctt tgcgcggcca tcaggcggaa ttgcagtcgg ccaaggcgca
     2101 ggagcagaag ctggtttcgg tgggggcgat cgagcagcag aaaacagcag actaccgccg
     2161 tttgcgggcc gacaatttta tttcggaaca tgcgtttttg gagcagcaga gcaaatcggt
     2221 cagcaattgg aacgatttgg aaagtacgcg cggtcagatg aggcagattc aggcggccat
     2281 tgcacaggcg gagcagagtc gggtgctgaa tacgcagaac ctgaaacgcg atacgctgga
     2341 tgcgctgcgc caggcaaacg aacagattga ccaataccgc ggccaaacgg ataaggcaaa
     2401 gcagcggcag cagctgatga caatacagtc gcctgcggac ggcacggtgc aggaattggc
     2461 cacctatacg gtgggcggtg tggtgcaggc tgcccaaaaa atgatggtgg ttgcgcccga
     2521 tgacgacaaa atggacgtgg aagttttggt attgaacaaa gacatcggtt ttgtggaaca
     2581 gggacaggat gcggtggtga agattgagag ttttccctat acgcgctacg gttatctgac
     2641 gggcaaggtg aaaagtgtca gccatgatgc ggtaagccac gaacagttgg gcttggttta
     2701 tacggcggtg gtgtcgctgg acaaacatac cttgaatatt gacggcaaag cagtgaatct
     2761 gacggcgggc atgaatgtca cggcggagat taaaacgggt aaacggcggg tgctggatta
     2821 tctgttaagc ccgctgcaaa ccaaattgga cgaaagcttt agggagcgat aggcggatcc
     2881 gtactgggca tttgttatcc gccggttcgg acatgcagac tgcctgaaac cattgcccgg
     2941 atgacattgc tcaatctaat gataatgcaa gattacggta tttccgtttg cctgacactg
     3001 acgccctatt tgcaacatga actattttcg gctatgaaat cctatttttc caaatatatc
     3061 ctacccgttt cactttttac cttgccacta tccctttccc catccgtttc ggcttttacg
     3121 ctgcctgaag catggcgggc ggcgcagcaa cattcggctg attttcaagc gtcccattac
     3181 cagcgtgatg cagtgcgcgc acggcaacaa caagccaagg ccgcattcct tccccatgta
     3241 tccgccaatg ccagctacca gcgccagccg ccatcgattt cttccacccg cgaaacacag
     3301 ggatggagcg tgcaggtggg acaaacctta tttgacgctg ccaaatttgc acaataccgc
     3361 caaagcaggt tcgatacgca ggctgcagaa cagcgtttcg atgcggcacg cgaagaattg
     3421 ctgttgaaag ttgccgaaag ttatttcaac gttttactca gccgagacac cgttgccgcc
     3481 catgcggcgg aaaaagaggc ttatgcccag caggtaaggc aggcgcaggc tttattcaat
     3541 aaaggtgctg ccaccgcgct ggatattcac gaagccaaag ccggttacga caatgccctg
     3601 gcccaagaaa tcgccgtatt ggctgagaaa caaacctatg aaaaccagtt gaacgactac
     3661 accgacctgg atagcaaaca aatcgaggcc atagataccg ccaacctgtt ggcacgctat
     3721 ctgcccaagc tggaacgtta cagtctggat gaatggcagc gcattgcctt atccaacaat
     3781 catgaatacc ggatgcagca gcttgccctg caaagcagcg gacaggcgct tcgggcagca
     3841 cagaacagcc gctatcccac cgtttctgcc catgtcggct atcagaataa cctctacact
     3901 tcatctgcgc agaataatga ctaccactat cggggcaaag ggatgagcgt cggcgtacag
     3961 ttgaatttgc cgctttatac cggcggagaa ttgtcgggca aaatccatga agccgaagcg
     4021 caatacgggg ccgccgaagc acagctgacc gcaaccgagc ggcacatcaa actcgccgta
     4081 cgccaggctt ataccgaaag cggtgcggcg cgttaccaaa tcatggcgca agaacgggtt
     4141 ttggaaagca gccgtttgaa actgaaatcg accgaaaccg gccaacaata cggcatccgc
     4201 aaccggctgg aagtaatacg ggcgcggcag gaagtcgccc aagcagaaca gaaactggct
     4261 caagcacggt ataaattcat gctggcttat ttgcgcttgg tgaaagagag cgggttaggg
     4321 ttggaaacgg tatttgcgga atagagcagg ctgaaacggt tatgaaattc ccaaagcagc
     4381 ctgcaccccg tttcgaaagt gcaggctgct ttgggattga tccgatactt tcacattctc
     4441 attgccttta aataaagcac agttaaaaac acatttaaat taagtgcgaa ttaattcaaa
     4501 tgtatattca attaaaatca aa
//
LOCUS       DAWEYF010000149         4476 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.149, whole genome shotgun sequence.
ACCESSION   DAWEYF010000149 DAWEYF010000000
VERSION     DAWEYF010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.149"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(505..611)
                     /locus_tag="WGN93_001725"
                     /pseudo
     CDS             complement(505..611)
                     /locus_tag="WGN93_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1030..1800)
                     /gene="xth"
                     /locus_tag="WGN93_001726"
     CDS             complement(1030..1800)
                     /gene="xth"
                     /locus_tag="WGN93_001726"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ0227601.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1860..2141)
                     /locus_tag="WGN93_001727"
     CDS             complement(1860..2141)
                     /locus_tag="WGN93_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ0227602.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSNHLNRLRVEGLVDFTRYHRIIEYRLVSEEAAAILHTVRDLENKRVA"
     gene            complement(2548..3429)
                     /gene="nadC"
                     /locus_tag="WGN93_001728"
     CDS             complement(2548..3429)
                     /gene="nadC"
                     /locus_tag="WGN93_001728"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ0227603.1"
                     /translation="MPSENTLFSLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLACLAFQTMDPSVRFQAEIQDGQAVRAGQTLAVVEGNACAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVQQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHLHTIYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(3505..4443)
                     /locus_tag="WGN93_001729"
     CDS             complement(3505..4443)
                     /locus_tag="WGN93_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227604.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1037 a         1106 c         1192 g         1141 t
ORIGIN      
        1 cgtttcatga aactgatgca gatatagtgg attaacaaaa atcaggacaa ggcgacgaag
       61 ccgcagacag tacagatagt acggcaacgc tgtactggtt taaatttaat ccactatatt
      121 ttgtaatagc tgccattatg cctactagga tatatacctt ctatataatc cttatttaaa
      181 taaaaaccct tataaaaatc tgtgttatct gtcgggattg aaaaaaagat tttatctttc
      241 tcatcaggtt tatatttgct atcaatatca aaaagagaat aaggattaca atgagttcga
      301 catactaggt aaaaatttat atcttggatc atgaaatatt cgatatttat caggatcgaa
      361 agatgctaaa aattcatcaa tattggtact ggatattttg tcatcactaa taaacatcgc
      421 tagagatggg cgactttgat tttccatttg ttgattagta aaggatataa atactaactt
      481 gccattgtca aaccacatag atttatatag tggattaaat ttaaaccagt acgtcgttgc
      541 ctcgccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt
      601 aatccactat agttattgcc tttgggagaa tcaattctga cagcacataa catagattta
      661 tctttacagt cgttatattg agtttcatca aactcaactg catggcacaa taaaggcaat
      721 aggaaaaaca gggttattaa tttattacta tatataagac ggctttctat ttattcgaaa
      781 ataaatctag ttttcaatat ttgattttgt tttggattag tgtacataat aaattttact
      841 gctccaaaat ctgatattaa ccctatgtat ttcataaatt tttcaggaaa ataggctgtg
      901 tttgaacaat ccgccgattt cggctgtttg ccggggaaag gcaattattt ttcagtcaga
      961 tagaaagcta tcctattgaa taaattgaag ataaggatgc ttgtcaacgc catatcaaaa
     1021 cacggtcttt taccaatcga attctgccgt caccggcgcg tggtcgctcg gacgctccag
     1081 cgcgcgcgtc tccaaatcga cgcggacatc cttcaacgcc gccgccatcg caggcgacac
     1141 caaaatatgg tcgatacgca ggcccagttt gcgttggaac atcgcgccgc gatagtcgaa
     1201 ccaggtatag aacgcgcctt cgggatggac ttggcgcagg ctgtcggtca gtcccaaatc
     1261 cagcaggttt tgaaaccact gccgttcgac ggacgaacag tggatttttt cgtgccattt
     1321 ttcagggtcg taacagtccg catcggcagg cgcgatattg aaatcgccca gcaacaccag
     1381 tttgccgtgg cgggtcattt catcgcggac aaactccgtc agtgcggcaa accactgttc
     1441 cttatatttg aatttggggc tgtccaaagc ctcgccgttg acgcaataga cattgatgac
     1501 gcgcacgccg ctgacggttg ccgcaatcac gcgccgttgc ggatcgtccg gcagtgcggg
     1561 caaaccgaaa tgcacgtcct gcggcacgct gcggctgacg attgccacgc cgttgtaggt
     1621 tttctgcccg ctccaaacac agtgccagcc catcatttgc aaagcggcgg ccggaaattt
     1681 gtcctgatcg agtttgagtt cctgcaaaac caaaatatcg ggcggattgt cggcaagcag
     1741 gttttgcacc tgcggcagcc gcacattgag cgaattgaca ttccaagtgg tgattttcat
     1801 aacatttccg aaaaatgctg tctgaaacgt tcagacggca aaaggaaagg attctaacac
     1861 tatgccacgc gtttgttttc caaatcgcga accgtgtgca gaatcgccgc cgcttcttcg
     1921 gaaaccaggc ggtattcgat aatgcggtgg taacgcgtaa aatcgactag accttccacg
     1981 cgcaggcggt tcaaatggtt ggaaactgcg gtggccggca gggataagga ttttgccagt
     2041 tcggcgatat tgcgttcgct gtccaacaat tgaatcagta tcgccatacg ttcgggatgc
     2101 gccataagtt tgagtatggt gtggagcggt attgtgttca tcggtattcc taaaaccttt
     2161 gccgcccgcc aagcggattg acgggcggca gatatggatg attgtgatta tctttataaa
     2221 tcgtattata aatcaaatat ttatggatga ttgtacagga ttgtatgttc cttttcccac
     2281 tttttttgca aacaagcgta aaggcgggct ttcagacggc ataaaactgc cgccccccgt
     2341 cctttttcct gccctaccga tgccgccgcg ctgtcgggca aacaaaatac ctgcctgaaa
     2401 tgctgttttt tctaaagcat cacgaccttt acgaaaaatg ccgtctgaag aatctttcag
     2461 acggcatttc ctccctgagg caataaccgg attagggtta agcggttcct tgcctgacat
     2521 atcagacagc cgcccgcacc ctaaaactca cgccacgaaa tccaaaccta tgtccaacga
     2581 acggctgctg tgggtcagat agccgagggc gatgccgtcc actccggttt gcgccacgcg
     2641 cttcaggcgg tcgaagccga tgccgcccga tgcttcgcaa tagatggtgt ggaggtgggc
     2701 ggtttgcgtg tggcagcggt ttgccgcttc tttcagggtt tcgtcgtcca tgttatccag
     2761 caaaatccgt tccgcgcccg ctgcgatggc ttcgtccagt tgtgccaacg tatccacttc
     2821 gatttccacg caggtcaatg ctccgacagc ctgttttgcc tgctgcacgg cttgggcgat
     2881 gctgccgcaa taggcgaggt ggttgtcttt gatgagcacg gcgtcgtcca agcccatgcg
     2941 gtggttcacg ccgccgcctg ccctgacggc gtatttttgc aggacgcgca gcagggggat
     3001 ggttttgcgg ctgcacacga tgtctgtacc gtattcggcg acttcggcaa cggcacgcgc
     3061 ggtggcggtg gcgatgccgc ttaagtgcgt gaggtagttg agtgcggtgc gttcggcggc
     3121 gagcagcgcg caggcgttgc cttcgacgac ggccagcgtc tgacctgcgc ggacggcttg
     3181 tccgtcttgg atttcggctt ggaaacggac ggacggatcc atcgtctgaa aggcgagaca
     3241 cgccaagtcc ataccggcga taacaccgtc ttcgcggctg acgaggaaga gtttggcggt
     3301 tttgtcgggg gcgataacgg cggcggacgt aatgtcgccg cgcctgccca agtcttcgct
     3361 caaggcttgt tcgactatgg ggcgcaacag ggtgtcgggc agggaaaaga gggtgttttc
     3421 agacggcatg aggtttcctt tgtcgaaaaa gattgatgtt gcaccgatgg ggcaaaactt
     3481 catttgatgc cgtctgaaaa cgggctaacg gctgcccagc ggcagtccga tgtccgaaat
     3541 cagcctgtcg ggcaggacgt cgtcgcggaa gcggcaaagc tgcgcgggac ggcctttgct
     3601 gcccgatacg ccggtatccg acggctcgat gaggttttgc tgctgaatct ggcggcggaa
     3661 gttttgcttg tgcagcaatc ttccgctgat ggcttcgaca ctgttttgca gttgcagcag
     3721 cgtgaattcg ggcggcatca gctcaaaaat cacggggcgg tatttgattt tggcgcgcag
     3781 gcgggacagg gcggtcgcca atacgcggcg gtggtcgtgg cgcatgggct gccctgtgag
     3841 cgcgaaatcg aagtttgcct gcggctcggc ggcttccact atcaggccgc tttcatacag
     3901 catttcatag cgttgcaaaa cgtattcttc cgaccagttt tccggttcga ccccccaaca
     3961 caaatgaatg cgcttgagcc gcatttgacg cacttcctcc gtgtccgccg agtttgccca
     4021 aatgcgcagt cggctgacga cggcgtcgcg ctgtccgccg tcggtgcgca agtcttccca
     4081 cgggaaatag ccgtagcagt cctgccattt cgcatcggga tgcaggatgc tgtcggctgc
     4141 ctcgcgcacc agccccaaat agctgacgta caagacgggc atgccgtgtt cgttgcggcg
     4201 gtgggtatcg acaaaggtgt aaagctgttc cacatagccc ataggctgcg aagtctgctt
     4261 ggcaacccac agcttcacgc ccgcctgcaa ggaattgcgc agaggggaga gcgggccgtt
     4321 gggcaggagt gtgccttggg cgacggttaa tacccgcagg ccgccgtcgg taacggcaat
     4381 caatacggga accagctcga cgatgctttg cggcggggct tcggcttcgg ggtaggcatc
     4441 catgctcggc tttctgcggg tgggaaaggc tttatt
//
LOCUS       DAWEYF010000150         4450 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.150, whole genome shotgun sequence.
ACCESSION   DAWEYF010000150 DAWEYF010000000
VERSION     DAWEYF010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.150"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WGN93_001730"
     CDS             complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WGN93_001730"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ0227605.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACTRLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WGN93_001731"
     CDS             complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WGN93_001731"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ0227606.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1964..3205
                     /locus_tag="WGN93_001732"
     CDS             1964..3205
                     /locus_tag="WGN93_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ0227607.1"
                     /translation="MPNKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGDVSLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTF
                     IWAAGGLIADAKPSVLFDTQAPAGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSISGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3355..4410
                     /locus_tag="WGN93_001733"
     CDS             3355..4410
                     /locus_tag="WGN93_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ0227608.1"
                     /translation="MKLKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFD
                     HSIPEYALIEPHLVDQHRTLKKLRSFLFSSRLTQTRKNSAAKLIACHHADYADLLICG
                     GTHLGYLHHMAQKPNLLDRLAIRRNRSNYATAKLIMAHSHMMRRELVGLYGVPPERIQ
                     VAPPPADTERFFPQPGETADLRAKYGFADYETVFLFPSTGHTRKGLELLADFFEHTGL
                     PVKLAVVGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESVLCGT
                     RVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALNYN
                     PSLSHHIDRLTDMLASV"
BASE COUNT         1044 a         1448 c         1025 g          933 t
ORIGIN      
        1 gtcctgattt ttgttaatcc actataaaat ggaaaatacc cggctatcgt ctcattttcg
       61 ttttaatcag ccataaaaat gccgtctgaa accctttcag acggcatttc tgtcaaacgc
      121 cggacgcact caatccaaac tcaacagcag gttgcggaac gcgttcgggt ctttgataaa
      181 cgtcatctcg cccgcctgcg gaaaatgaaa gtccaacagg cgcgacaccc aaaaacggat
      241 gcagccggca cgttgggcgg tcgggaaata cgccttttct tcggcactca aggggcgcac
      301 gccctcataa ccaccgataa acgccttttt caacgcctca tccaacttat tgtccgctgt
      361 ccttgcccaa tcgttgaccg caatcgccaa gtcatacata aaattgcccc ggcaggcata
      421 atagaaatcg atgaaacccg atacctgacc gccgtcaagc aacacattgt ctttaaacaa
      481 atcggcgtgg atgatgcccg aaggcagatg attgccgaga ttgtccttca gcgcatcgat
      541 ttcggaacac agcagcgcgg catcgtcttg cgacaggacg ggcagcagcc gggtgcacgc
      601 ctccgtccac cacgcatcgt aacgcgggtt ttccatttcc aaagggaaat cggcggcggc
      661 aaggtgcatt ttggccagca tcgcaccggt atggaaacac tgctccgccg tcggcagcgc
      721 ggtatccgaa cctttcaggc aggcaaccaa acaagccggc ttgcccgcca aaacggaatc
      781 aagccggccg tctttgcgcg caaccggcgc ggcaaccgcc acgcccttca tactcaaatg
      841 ccggttaagc tccagaaaaa acggcagctc ttcctgtttc aacacttcaa acacggtcag
      901 cacataacgt cccgaagtcg tcgtcagaaa ataattgctg ttggtaatcc cctgcgcgat
      961 gccctgcagg gaaacaaatt cccccaaatc gtaaccgctc aggaagccgc gcatttcatc
     1021 atcggaaaca ctggtataga cagacatatc aactcacttg ctcaaaaacg ggcaaacccg
     1081 ccgtcagaac gccggacggc aggcaaacat ataattcaca tcggtcgaat cgcacagggc
     1141 ataagtttgc gacaacacat ggtaagtcat acccttcgta tccgccacat ccaagcctgc
     1201 ctgacggcac attcgcgcca gctcggcagg tgcgatgaat tttttccagt cgtgcgtacc
     1261 tttggggaca aacttcaaca gatattccgc cgccacaatc agatgcaggt acgatttcgg
     1321 gtttttattg atggtagaaa aaaacaccat gccgtccggt ttgaccagat tggcacaagc
     1381 acgcacgatg gcggcgggat cggggacgtg ttccatcatt tccatgcacg ttaccacatc
     1441 gaacgagtgc ggttccgcct cggcaaggtc ttccacgcgg atacattcgt attcgatatc
     1501 ggcgacattg ttcaaagccg cgtgcaggcg ggcggtttcc aacgactgct ccgccatgtc
     1561 gatgcccttt acaaacgccg cgccgcgccg cgccatactt tccgccaaga tgccgccgcc
     1621 gcagcccacg tccaaaaccc gtttgccgca caaatccgcg tgtccgtcga tataatccag
     1681 ccgcagcgga ttgatgtcgt gcaaggtttt gaactcgccc gacttgtccc accatttgtc
     1741 ggcaatccgg ctgaatttgg cgatttcccc ctcatcgaca ttatattttt tgtcggacat
     1801 tttccctccc atctgacgaa ccgcccactc caaaacccaa gattatacta tggaacacaa
     1861 tgccgtctga aagccttttc gggcggcgcg gcgcaaatac cttacaaatc cttacacttt
     1921 acggcataat ggcggctcgc tttttctggc agaaagacaa aatatgccca acaaaacccc
     1981 ttcactgttc ggcggcgcga tgattatcgc cggcacggtc atcggcgcag gcatgctcgc
     2041 caacccgacc gccacatccg gcgtatggtt taccggctcg ctggccgtgt tgctgtacac
     2101 ctggttttct atgctttcca gcggcctgat gattttggaa gtcaacaccc attatccgca
     2161 cggcgcaagt ttcgacacga tggtcaaaga cctgctcgga cgcggctgga acatcatcaa
     2221 cggcatcgcc gtcgccttcg ttttatacct gcttacttac gcttatatct tcgtcggcgg
     2281 cgacctgacc gccaaaggct taggcagcgc ggcaggcggc gacgtttcac tcaccgtcgg
     2341 acaactcgtc ttcttcggca tcctcgcctt ttgcgtatgg gcatccgcac gcttggtcga
     2401 ccgcttcacc ggcgtcctta tcggcggcat ggtattgacc tttatttggg cggccggcgg
     2461 gctgattgcc gatgccaagc cgtccgtcct cttcgatacc caagcccccg ccggcacaaa
     2521 ctactggatt tacgccgcca ccgccctgcc cgtctgcctc gcttccttcg gcttccacgg
     2581 caacgtctcc agcctgctca aatactttaa aggcgacgcg cccaaagtgg ctaaatccat
     2641 ctggacgggc acactgattg cgctggtaat ttacgtcctc tggcaaaccg ccatccaagg
     2701 caacctgccg cgcaacgagt tcgcccccgt catcgccgcc gaagggcaag tctccgtcct
     2761 catcgaaacc ctgtccaaat tcgcccaaac cggcaatatg gacaaaatat tgtccctgtt
     2821 ttcctatatg gcgatcgcca cctcgttttt aggcgtaacg ctcggactct tcgactacat
     2881 cgccgacatc ttcaaatgga acgacagcat ctccggccgc accaaaaccg ccgcgctgac
     2941 cttcctgccg cccctgattt cctgcctgct cttccccacc ggcttcgtta ccgccatcgg
     3001 ctacgtcggc ctggcggcaa ccgtctggac aggcatcatc cccgccatgc tgctctaccg
     3061 ttcgcgcaaa aaattcggcg caggcaaaac ctataaagtt tacggcggct tgtggctgat
     3121 ggtttgggtc ttccttttcg gcatcgtcaa catcgccgca caggtattga gccaaatgga
     3181 actcgtcccc gtatttaaag gataaaggca aaatgccgtc tgaagcccgc cggcggcttc
     3241 agacggcatt gccgcaacaa acggcaaccg tattccggca cacagcgcat taccctgccc
     3301 ctcacgcaca aatcccgccc cgacaaaccg ggacgcaacc ataaaggaac aatgatgaag
     3361 ctcaaaatag acattgcaac caacaacttc aaacacggcg gcggcacgga acgctacaca
     3421 ttggatttgg taaagggtct gaacagacaa aacatcacac cggccgttta tgcgacgaaa
     3481 tttgatcaca gcattcctga atacgcccta atcgaacccc atcttgtcga tcaacaccgg
     3541 acgctgaaaa aactacgctc attcctcttt tcaagccggc tcactcaaac cagaaaaaac
     3601 agtgccgcca aactgattgc ctgccaccac gccgattacg ccgacctcct catctgcggc
     3661 ggcacacact tgggctacct gcaccatatg gcgcaaaaac cgaacctgct cgaccgcctc
     3721 gccatacgcc gtaaccgcag caactacgcc accgccaaac tgattatggc gcattcccat
     3781 atgatgcggc gcgaactggt cggactgtac ggcgttcccc ctgaaagaat ccaagtcgcc
     3841 cccccccccg cagatacgga acgcttcttc ccgcaacccg gagaaactgc cgacctgcgc
     3901 gccaaatacg gctttgccga ctatgaaacc gttttcctgt tcccatcgac cggccacacg
     3961 cgcaaaggtc tggaactgct tgccgacttt ttcgaacata ccggcctgcc cgtcaagctc
     4021 gccgttgtcg gctccccgct cccccgccct atgaaaaacg tcgtcgggct gggcttctgc
     4081 accgatatgc ccgaactcta ccgcgccgcc gactttacca ttatggcctc cctgtacgaa
     4141 cccttcgggc tggtcggtgt cgaatccgtc ctatgcggca cacgcgtcgt cctctccgaa
     4201 aacatggcat gtacagaggt catgaacgaa gaagccggat tctttttctc acgccaaaac
     4261 ccggaaaccc tggcgcaagc cgttgcccaa gccgtcagcc ttaaaaaaca gggcggacac
     4321 cgcctgtccg acccgatgcg tgcactgaac tacaacccgt ccctgtcgca ccacatcgac
     4381 cgactgaccg acatgctggc atccgtataa caaaatgccg tctgaacgag ttttcagacg
     4441 gcattgctgc
//
LOCUS       DAWEYF010000151         4406 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.151, whole genome shotgun sequence.
ACCESSION   DAWEYF010000151 DAWEYF010000000
VERSION     DAWEYF010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.151"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            175..2022
                     /locus_tag="WGN93_001734"
     CDS             175..2022
                     /locus_tag="WGN93_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ0227609.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPEGKTLADYSSYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAAMGNTQEAEKLY
                     KQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAVKRALVLFQNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIPI
                     EGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGTVPAR"
     gene            2311..2523
                     /locus_tag="WGN93_001735"
     CDS             2311..2523
                     /locus_tag="WGN93_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ0227610.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2655..3101
                     /locus_tag="WGN93_001736"
     CDS             2655..3101
                     /locus_tag="WGN93_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ0227611.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            3122..3271
                     /locus_tag="WGN93_001737"
     CDS             3122..3271
                     /locus_tag="WGN93_001737"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227612.1"
                     /translation="MPSEARIAGSDGIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(3300..3692)
                     /locus_tag="WGN93_001738"
     CDS             complement(3300..3692)
                     /locus_tag="WGN93_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ0227613.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFSGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3763..4368)
                     /locus_tag="WGN93_001739"
     CDS             complement(3763..4368)
                     /locus_tag="WGN93_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ0227614.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
BASE COUNT         1082 a         1236 c         1217 g          871 t
ORIGIN      
        1 ggcaaaggca gcggttctca ccaaaacggc aaatgattga aaaatataaa ttatgtcaga
       61 aacattccaa agccggtgca gtttcggcat ataattcggg caaacgcctg ttcagacggc
      121 attttgtctt ttccaaccct gaccgttcag ggttccgatt cttaaggaaa tccgatgtac
      181 ctaccctcta tgaagcattc cctgccgctg ctggcggccc tggtgcttgc cgcgtgttct
      241 tcgacacacg cgcccagcag caagaccctg gcagacaata tagaaactgc cggtctttcg
      301 gcaagcgttc ccacccgccc tgccgaaccc gaaggaaaaa cgctggcaga ttacagcagc
      361 tacccgtccg cactggatgc agtgaaacag aaaaacgatg ccgccgtcgc cgcctatttg
      421 gaaaacgccg gcgacagcgc gatggcggaa aatgtccgca acgagtggct gaagtctttg
      481 ggcgcacgca gacagtggac gctgtttgca caggaatatg ccaaactcga accggcaggg
      541 cgcgcccaag aagtcgaatg ctacgccgat tcgagccgca acgactatac gcgtgccgcc
      601 gaactggtca aaaatacggg caaactgcct tcgggctgca ccaaactgtt ggaacaggca
      661 gccgcatccg gcttgttgga cggcaacgac gcctggaggc gcgtgcgcgg actgctggcc
      721 ggccgccaaa ccacagacgc acgcaacctt gccgccgcat tgggcagccc gtttgacggc
      781 ggtacacaag gttcgcgcga atatgccctg ttgaacgtca tcggcaaaga agcacgcaaa
      841 tcgccgaatg ccgccgccct gctgtccgaa atggaaagcg gtttaagcct cgaacaacgc
      901 agtttcgcgt ggggcgtatt ggggcattat cagtcgcaaa gcctcaatgt gcctgccgcc
      961 ttggactatt acggcaaggt tgccgaccgc cgccaactga ccgacgacca aatcgagtgg
     1021 tacgcccgcg ccgccttgcg cgcccgacgt tgggacgagc tggcttccgt aatctcgcat
     1081 atgcccgaaa aactgcaaaa aagcccgacc tggctctact ggctggcacg cagtcgcgcc
     1141 gcaatgggca acacgcaaga ggcggaaaaa ctttacaaac aagcggcagc gacgggcagg
     1201 aatttttatg cggtgctggc gggggaagag ttggggcgca aaatcgatac gcgcaacaat
     1261 gtgcccgatg ccggcaaaaa cagcgtcctc cgtatggcgg aagacggtgc agtcaaacgc
     1321 gcactggtat tgttccaaaa cagccgaacc gccggcgatg cgaaaatgcg tcgtcaggct
     1381 caggcggaat ggcgttttgc cacacgcggc tttgacgaag acaagctgct gaccgccgcg
     1441 caaaccgcgt tcgaccacgg tttttacgat atggcggtca acagcgcgga acgcaccgac
     1501 cgcaaactca actacacctt gcgctatatt tcgccgttta aagacacggt aatccgccac
     1561 gcgcaaaatg ttaatgtcga tccggcttgg gtttatgggc tgattcgtca ggaaagccgc
     1621 ttcgttatag gcgcgcaatc ccgcgtaggc gcgcaggggc tgatgcaggt tatgcctgcc
     1681 accgcgcgcg aaatcgctgg caaaatcggt atggatgccg cccagctcta caccgccgac
     1741 ggcaatatcc gtatggggac gtggtatatg gcggacacca aacgccgcct gcaaaacaac
     1801 gaagtcctcg ccaccgcagg ctataacgcc ggtccaggca gggcgcgccg atggcaggcg
     1861 gatatcccca ttgagggcgc ggtatatgcc gaaaccatcc cgttttccga aacgcgagac
     1921 tatgtcaaaa aagtgatgac caatgccgcc tactacgccg ccctcttcgg cgcgccgcac
     1981 atcccgctca aacagcgtat gggcaccgtt cccgcccgct gacgtaccga tgccgtctga
     2041 aacccgcccg gtcttttaga cggcattttt atcccgaacg gcattgacgg cgaaccataa
     2101 atataagaca atccgaaaat tgtttttcct gctttttcaa gcagcttgac acggcacaag
     2161 ccgacccgtt aggaggtgat gtttccgtca cggcgcgtat cccgccgccg aaaggcacag
     2221 cgatacggaa aacctacaac accgtctgcc ctaccctttc caccgatatg atgggcagat
     2281 gcaacaacag aatttattaa aggaaataaa atgcctgcaa tccgcgtaaa agaaaacgaa
     2341 ccctttgaag tcgctatgcg ccgtttcaaa cgcgccgtag aaaaaaccgg cctgctgacc
     2401 gagctgcgcg cccgcgaagc ctacgaaaaa ccgactaccg aacgcaaacg caaaaaagcg
     2461 gcagccgtaa aacgcctgca aaaacgcctg cgcagccaac agctgccgcc caaaatgtac
     2521 taaacgttca agtacagatt acaggtcagc cctgtgatat gaggacacac cgcaagacct
     2581 gctctgcggt gtgttttgct tttcagacgg catcgaaacc cgccgtctcc atccgacatc
     2641 ccagcgagga cattatgagc ctgaaaatcc gccttaccga agacatgaaa accgcgatgc
     2701 gcgccaaaga ccaagtttcc ctcggcacca tccgcctcat caacgccgcc gtcaaacagt
     2761 ttgaagtgga cgaacgcacc gaagccgacg atgccaaaat caccgccatc ctgaccaaaa
     2821 tggtcaaaca gcgcaaagac agcgcgaaaa tctacactga agccggccgt caggatttgg
     2881 cagacaaaga aaacgccgaa atcgaggtac tgcaccgcta cctgccgcaa atgctctccg
     2941 ccggcgaaat ccgtactgcg gtcgatgccg ccgttgccga aaccggcgcg gcaggtatgg
     3001 cggatatggg caaagtgatg ggcgtattga aaacccgcct cgccggcaaa gccgatatgg
     3061 gcgaagtcaa caaaattctg aaagccgtac tgaccgcctg attgtatgaa tataaggaaa
     3121 aatgccgtct gaagcccgta tcgcaggttc agacggcatt ttcaatgtcc caatatcgaa
     3181 tcggcagggg caacacggtt tcgatacacc gaaacgggtt ttgccgataa acggattccg
     3241 tttgcgcccc atcggacaaa atgccgtctg aaacacgatt ccgttcagac ggcatagatt
     3301 tatttgacca atttcaagcc ttttttggcg ggccggggcg cggtttcggc agaggtgttt
     3361 tcaggcggcg tgtcggggcg atacgcttcc aattcaaacc ccataccttc gccggtctcc
     3421 cgtgcgaaaa ggctgaggac gtgtccgaca ggtatccata tatcgtgcgc ctgtccgctg
     3481 aaacgggcgg aaaaactgat ccaatcgttg tcgatttgaa ggttttgcgt ggcggtcgcg
     3541 ccgatgttga gcataatttc gttgtcgcgg acatactgca tagggacgcg cgtgtgttcg
     3601 ttgacccaga caaggatgtg cggtgtgagg ctgttgtcgc tgcaccattc gcagagggcg
     3661 cggaggatgt agggtttggt ggaagtgggc ataatggttc cgtgttgtac gccaaaatag
     3721 gaaaatgcct gcaaaacggc gggttttgca agcatttcgg acttatttgc gcatggcttt
     3781 ttcggcgggt gtcagtgctt cgataaaggc ttcgcgctgg aagatgcgct cggcgtattt
     3841 gagcagcggc gcggcacttt tgcccagttt gacatcgtag tggtcgagcc gccacagcag
     3901 cggagcaagg gcgacatcaa tcatagaaaa atcttcgccg aggatgtatt tgcttttgct
     3961 gaacgaaggg gcgagcatgg tcagaccgtt gccgatggct tcgcgcgctt ttgcctgctc
     4021 cttattggta gcggcggggt tttccaacac ttggacgtgg ttgaacaatt ctttttccat
     4081 acggtacagc accagccggc ccctgccgcg cataacggga tcgccgggca taagctgcgg
     4141 atgagggaag cgttcgtcga tgtattcgtt gatgatgttg gactcgtgca gcaccaaatc
     4201 gcgctcgacc agtacgggga cctggttgta cgggttcatg acggcgaggt cttcgggttt
     4261 gttgtaaata tcgacgtctt tgatttcaaa atccatacct ttttcgtaca aaacgaagcg
     4321 gcagcggtgg ctgaaggggc aggtaatgcc ggaatagagg gtcatcataa taattgtcgc
     4381 tcctgtgtga tgcctacaaa acggct
//
LOCUS       DAWEYF010000152         4403 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.152, whole genome shotgun sequence.
ACCESSION   DAWEYF010000152 DAWEYF010000000
VERSION     DAWEYF010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.152"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(26..349)
                     /locus_tag="WGN93_001740"
     CDS             complement(26..349)
                     /locus_tag="WGN93_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ0227615.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(337..576)
                     /locus_tag="WGN93_001741"
     CDS             complement(337..576)
                     /locus_tag="WGN93_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ0227616.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(699..1496)
                     /gene="truA"
                     /locus_tag="WGN93_001742"
     CDS             complement(699..1496)
                     /gene="truA"
                     /locus_tag="WGN93_001742"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ0227617.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALENALAQI
                     AGEAVSTIVAGRTDTGVHATAQVVHFDTTAARPQQAWIRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
     gene            complement(2292..2984)
                     /locus_tag="WGN93_001743"
     CDS             complement(2292..2984)
                     /locus_tag="WGN93_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ0227618.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPAPSSLTSAKTFWGV
                     CRKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTRRFAPYTPEAKQW
                     LKIHGRELFALG"
     gene            complement(2981..3724)
                     /locus_tag="WGN93_001744"
     CDS             complement(2981..3724)
                     /locus_tag="WGN93_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ0227619.1"
                     /translation="MLIIRNLIYWLILCSSLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            complement(3753..4316)
                     /gene="gmhB"
                     /locus_tag="WGN93_001745"
     CDS             complement(3753..4316)
                     /gene="gmhB"
                     /locus_tag="WGN93_001745"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ0227620.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENTAPQAD"
BASE COUNT          860 a         1050 c         1406 g         1087 t
ORIGIN      
        1 aacacaatcc attcagacta ttcaatcagg caaacatctc ctgcaatact gcaaacagtt
       61 tttcagccgt actgttgtct aaatttccaa gatgtttgac caatccggct ttatccacag
      121 ccctaatctg ttcgggcaaa agcaaaccgt ctttatcctg aaagcggaca ttgacgcgga
      181 acggggcagg acggcttccg ctcgtcatgg gaacgatcag cacagtcttg agatagttgt
      241 gtatttcagg aggagagact acgacacaag gacgtgtctt tttgatttcg cttcctacgg
      301 tcgggtctaa ggagaccaga tagattccgc cgcgtactac catatccatt ctttatccgc
      361 ttcgttttca atttcggaaa aaaaatgctc ctgctcggtt tcgacaagca ttgcggcagc
      421 ttctgcccat cccctgcgaa cggtaggaca gcttaaaatg atattgccct tttcaactgt
      481 aacagccaag ctgtctactg cccctatttg acccaataat gatttgggca gaatcacgcc
      541 ttgcgagttt cccattttgc gtatgttgag aatcatatac gtaccatatt caccagttta
      601 tgtaataaca atgttagtac cttgatgagg tagtgtcaac attgaaaaag attgcctgac
      661 agtttgtccg atttcaaaat ctccgcgaca agaatgtttt aaagccattc ggggatttgg
      721 gggcggatga tgccgtatgc ctcgggatag tcgacgccgg tcaggtaaag cccgtcgggc
      781 ataaaggtcg gtggggcttt gaggcgactg cgttcttgaa tcagtgcggc gaagccttcg
      841 acgctgagtc tgccgctgcc gacatagacg agcgcgccca tgatgttgcg taccatgtgg
      901 tgcaaaaagg cgttgccgtg caaatcgagg cggacgagtc ctgcgctttg ggtaaggtcg
      961 gcgcggtaga tggttttgac gggggatttt gcttggcatt cggcggcgcg gaagctggag
     1021 aagtcttgtt cgccgatcaa ataggcggca gcccgacgca tcggttcgat gtcgagtttg
     1081 aggtgtgtcc agcctgccct gtttttgagc aggggggaac ggacgggggc ggattcgagc
     1141 aggtagcggt agtgccgtcc gtatgcgtca aatcgtgcat gaaattcggg ggcgacctgt
     1201 cgggcgtgca aaacggcaat gccttcgggc aggtgggcat ttacgccgcg tatccatgcc
     1261 tgttggggac gggcggcagt tgtgtcgaag tggacgactt gggcggtggc atgcacgccg
     1321 gtgtcggtcc tgccggcaac aatggtggaa accgcttccc ctgctatttg ggcaagtgcg
     1381 ttttccaatg ccgcctgaac ggtcggtacg ccgtcagcct gtttctgcca gccgtaaaag
     1441 cggctgccgt cataggatag ggttattgcc cagcgttgtt tttgtgcggt atccatcgga
     1501 tttgggattc ggataaatgt tcagactgca ttgtatcgca gattttgcag ggaaacggca
     1561 aacgcccagg gcgagcggcg ttgtttgggg agttgggggg tggatgcagt tgctacgaat
     1621 cgctatcctg tgaattcacc ctgtcaggag tgcccgaatc gtcattcccg cgcaggcggg
     1681 aatctaggtc tgtcggtgcg gaaacttatc gggtaaaacg gtttcttcag attttacgtt
     1741 ctggattccc actttcgtgg gaatgacggg atgtaggttc gtgggaatga cgcggtgcag
     1801 gttttcttaa ccccgcgttc tagattccca ctttcgtagg aatgacggcg gtagatttgg
     1861 cagatgcggc ggattcggca ggtctcaacc catcctacaa tccaccctga ccgcctttta
     1921 cgaatccgcc gccatcctgg gaaacgcaaa aaaatgccgt ccgaaaacct ttcagacggc
     1981 attttcgcgg gcaaatcagt aaaagacttc gcgtcagctt aagcgtttca taccgcacgt
     2041 cggaccgggc gggtttcggg tttcggaaga gtggtgtgaa atgaaacgcg gcagacggcg
     2101 tgtgtgccgc catcctgccc cgaaccggcg gcaaagcgtc atcgcggttt gaatcgggcg
     2161 ggcgcgtgcc tgttccggca cggatgccgt ctgaaagcgg cggcagcggt atgtgtcgcc
     2221 ggctgtgatg ctgctttccg gatgtccgtt tgggaggagg tctgaattgg cggatgcctg
     2281 cccgggccgc gtcagcctaa ggcgaaaagt tccctgccgt ggattttgag ccactgtttc
     2341 gcttcgggcg tgtagggtgc gaagcggcgg gtcagtgccc agaacgcgcg gctgtggtcg
     2401 gcgtgggcga ggtggcagag ttcgtgtatg cagacataat cggcaacgta ttccggtgcg
     2461 ccgaccagcc gccggttgag gcgtatgcct gtggttttgc ggcacacgcc ccagaaggtt
     2521 ttggcagagg tcagcgagga gggggcgggg aacagttgtg tggtgcgggc gtggcgttcg
     2581 aggcggggaa tcaggtaact gtgcgcctgc cgttccaaaa agtcccgcag cagcgcaagc
     2641 tgtttttcgg gtgcgccttc gggaacacgg atttcagacg gcatcagcag gatttgcgtg
     2701 tcttgatggg cggtgagggc aagctgtctg ccgtggaaga ggatggattc gggcagccgg
     2761 ttttcggcag tttgcggcgg cggtgttttc gccagtgttt gccgcaggac ggcttcgttt
     2821 tcatacagcc agcggtttag agcggagacg gagaagcagg gtgggacgct gatgcggacg
     2881 gtatgtgtgc cggcggggcg gataatcagg tttttcttgg cacggcgctt gatttcgacg
     2941 gtcagttcca tgccgtctga aagggtgtgg acaaaggcgg tcatgcggtt tcagacggca
     3001 ttttggcggc aaacgggcct gcgccggaaa tgagcggctg ctgcgtttcg atgaggtgtt
     3061 cgcattttcc catcaattcg gcttcgctgc cgcttgcgtg cgggatggtc ggacagatga
     3121 cgacggtgat ttcccccgga tatttcagaa aggagttttt cggccaaaat tcgccgctgt
     3181 tgagggcgac ggggacgatg tccatctcaa acattttcgc catgcgcgcg ccgccgagtt
     3241 tgtatttgcc gcgttttccg ggcgcaaggc gcgtgccttc ggggaaaatg gtaatccaat
     3301 agccttcgtt tttgcgcgcc aacccctgtt ttatgagctg ctcgttggct tcgcggcggt
     3361 tgttgcggtc tatgcctatg gttttgacca gtttcaagcc ccagccgaaa aaggggattt
     3421 tgaacaactc gcgtttggca acgtaaacct gcggcggaaa aatgtcctga agggcgagcg
     3481 tttcccagcc gctttggtgt ttggcgcaga tgacggcggg gcggtcgggg atgttttccg
     3541 cgccgatgat gcggtatttg agcccgacga tgtgtttgag cgagaggttg aggattttga
     3601 cccagacccg cgccatcttg tgcgccccgt ctcggaaagg cgaggcgagc agcataaagg
     3661 gaaagaggaa aatcaggctg gaacagagta tcagccagta aatcaggttg cggatgatga
     3721 gcatggtttt gccttgtcgg aatgcggtat gttcagtcgg cttgcggtgc ggtgttttcc
     3781 tgcatgatgt attgtgagaa atcgagcagg gtatcgaaaa cctgtgtgtg ttcgggtaat
     3841 tcgtgtccgt gttgggagag cgtttttttg ccttttccgg tcagaaccag cgcgggtttt
     3901 ccgccgacgg catcgattgc ctgcaaatcg cgcaggctgt cgccgaccag ccaggtttcc
     3961 gaggcttggg cgttgaagcg tccgatgatg tcttcaatca tacccggttt gggcttgcgg
     4021 cagttgcagt tgtcggcatc ggtgtgcggg cagaaccaga tgccgttgat ttcgccgcct
     4081 gcctgacgga cgaggcggtg cattttggcg tgcatttcgg taaggttttg aacggtaaaa
     4141 tatttgcgcc cgatgccgga ttggttggtg gcaacggcga cggtgtagcc tgcctgcgtc
     4201 agaaatgcca ccgcatccat gctgccttcg acaggtatcc actcgtcaac ggatttgacg
     4261 aagtcgtcgc ggtcctgatt gatgacgccg tcgcggtcga gaatgatgag tttcatcgcg
     4321 tttcctttgg gttggggcag gtcgggggtg gcattatact gaaatatcgg cagtgatgcg
     4381 cctgtgccgc gtgatatagt gga
//
LOCUS       DAWEYF010000153         4343 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.153, whole genome shotgun sequence.
ACCESSION   DAWEYF010000153 DAWEYF010000000
VERSION     DAWEYF010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.153"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            143..1111
                     /locus_tag="WGN93_001746"
     CDS             143..1111
                     /locus_tag="WGN93_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ0227621.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSGVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFIGLVVPNIISRLMGDKLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAYAV"
     gene            1101..2075
                     /locus_tag="WGN93_001747"
     CDS             1101..2075
                     /locus_tag="WGN93_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ0227622.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVL
                     QLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELVVMMGGSLLLFYTLIKQGGRDLSRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVYLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVKHSVRLP
                     MTVCIGGILLVGGQTVFEHLLGMQAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            2119..2745
                     /locus_tag="WGN93_001748"
     CDS             2119..2745
                     /locus_tag="WGN93_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227623.1"
                     /translation="MTQEHFPSFFNQAPTITVQDALAEFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAFMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRHLLSFGVGEINGTLTLRRKDNGKTVAVGLNAALQPFAPE
                     MRDIMPKAVSGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            2828..3586
                     /locus_tag="WGN93_001749"
     CDS             2828..3586
                     /locus_tag="WGN93_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227624.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLADTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPNDIFTAANIKTLFDMDVDVLDYEGKKLVIHHI"
     gene            3878..>4343
                     /locus_tag="WGN93_001750"
     CDS             3878..>4343
                     /locus_tag="WGN93_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin NadA"
                     /protein_id="HEZ0227625.1"
                     /translation="MKHFPSKVLTTAILATFCSGALAATNDDDVKKAATVAIAAAYNN
                     GQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQ
                     NVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFTE"
BASE COUNT          965 a         1245 c         1115 g         1018 t
ORIGIN      
        1 cgcgggaatg gcggcaagcg tttttattgg aacttgccct atcctctgcc cgatacggag
       61 gcttcaaaca aggctttccg ctccgacggt tcggactgcc ttgtttgaat cttctacgcc
      121 ttaacgcttt tcccttctgt ttatgactgc caaacctttt tccctcaacc tgaccaacct
      181 cctgctgctg gcggtgttgt ttgccgtcag cctgtcggtc ggcgttgccg atttccgctg
      241 gtcggatgtg ttttcgctgt cggacagcca gcaggttatg ttcatcagcc gcctgccgcg
      301 cacgtttgcg attgtgctga cgggcgcgtc gatggcggtg gcggggatga ttatgcagat
      361 tctgatgcgt aaccgttttg tcgaaccttc tatggcgggc gcgggtcaga gtgcggcttt
      421 gggtttgctt ctgatgtccc tgctgctgcc tgccgcgccg ctgccggtca aaatgtcggt
      481 tgccgccgtt gccgcgttaa tcgggatgct ggtgtttatg ctgctgatcc gccgtctgcc
      541 gccgaccgcg caactgatgg tgccgctggt cgggattatt ttcggcggcg tggttgaggc
      601 ggtggcgacc tttatcgcgt atgaaaacga aatgctgcaa atgctcggcg tgtggcagca
      661 gggcgatttt tcaggcgtac tgctggggcg gtacgagctg ctttggatta cgggcggttt
      721 ggcggtgttt gcctatctga ttgccgaccg gctgacgatt ttggggctgg gcgagacggt
      781 cagcgtgaat ttgggtttga accggacggc ggtgttgtgg tcggggctga ttattgtggc
      841 tttgattacg tcgctggtta tcgttacggt cggcaatatc ccgtttatcg ggctggtcgt
      901 gccgaacatc atcagccgcc tgatgggcga caagctgcga caaagcctgc ctgcggtggc
      961 cttgctgggc gcatctttgg tgttgctgtg cgatattatc ggacgcgtga ttgtgtttcc
     1021 gtttgaaatt ccggtctcta cggtttttgg tgtattgggt acggctttgt ttttgtggct
     1081 tttgttgagg aaacccgcct atgccgtctg aaaaaaatat cggttttatg gcaggaagca
     1141 gccgcccgtt gtgggtcgcc tttgcgctgt tgctggtttc ctgcgtcctg tttatgacgc
     1201 tcaacgtcaa aggcgattgg gattttgttt tgcaactgcg gctgaccaaa cttgccgcgc
     1261 tgctgatggt cgcctatgcg gtcggcgtgt ccacgcaact cttccaaacg ctgaccaata
     1321 atccgattct gaccccttca attttgggtt tcgattcgct gtatgtgttt ttgcagacct
     1381 tgctggtgtt tacgttcggc ggcgtgggct atgcttccct gccgttgacg ggcaaattcg
     1441 gctttgaact ggtcgtcatg atgggcggct cgctgctgct gttctacacg ctcatcaaac
     1501 agggcggacg cgatttgtcg cgcatgattt taatcggcgt gattttcggg attttgttcc
     1561 gcagcctgtc gtcgctgctt tcgcgcatga tcgatcccga agaatttacc gccgcgcagg
     1621 cgaatatgtt tgccggattc aataccgtcc acagcgagct tttgggcata ggcgcgctga
     1681 ttctgctcgt cagcgcggcg gtcgtttggc gcgaacgcta ccgcttggac gtttaccttt
     1741 tggggcgtga ccaagccgtc aatttgggca tcagctacac gcgcaacacc ttatggatac
     1801 tgctttggat tgccgcattg gtggcgacgg cgaccgccgt ggtcggcccc gtaagctttt
     1861 tcgggcttct cgccgcctcg cttgccaacc acttttcccc gtcggtcaaa cattccgtcc
     1921 gcctgccgat gacggtttgt atcggcggca tcctcttggt cggcggacag accgtgttcg
     1981 aacacctgct cggtatgcag gcagtgttga gcgtagtagt agaatttgcc ggcggactcg
     2041 ttttcctcta tctcgtttta aaacacaaaa aatgacggat gccgtctgaa cggccgccgc
     2101 cccgaaagga caaaccatat gacacaagaa catttcccat cattcttcaa ccaagccccg
     2161 accattaccg tccaagacgc attggccgaa ttcctcggcg cggccgaaaa cggcatcctc
     2221 acttaccgct acgccgatgc cgtgcgcctg tgcggacatt cctgcccgac cgtcgcgggc
     2281 gcgtacctga tggttatcaa aggtctgaaa gcactttacg gcgaagagct gcccgaacgc
     2341 ggcggcatcg aagcctttat gcagggcgcg cgcgacgaag gcacggtcgg cgtaaccgcg
     2401 tccgtcgtcc aactcctcac cggcgcagcc cccgaaaccg gctttggcgg catcggaatg
     2461 cagggacgct ttgcccgccg ccacctctta tcctttggtg taggcgaaat caacggcaca
     2521 ctgaccctgc gccgcaaaga caacggcaaa accgtcgccg tcggcctcaa cgccgccctg
     2581 caacccttcg cacccgaaat gcgcgacatc atgcccaaag ccgtcagcgg cagcgcaagc
     2641 gcagaagaac tcgaacgctt cggacaactc tggcaggcac gcgttaaagc atttttaacc
     2701 gaatcggcgg acgacccgca gttcgtcatc gtccgcgaag tgtgagcgtt cagacggcat
     2761 tccgaatttc aaatgccgtc tgaaccccgc caaacaacaa caaacctacg cccgacaagc
     2821 atccgccatg attaccatcc gcaacgtcag ctaccgcatc ggcacacgcc ccatcctcga
     2881 caacgtcagc ctcgacatcc ccgaaggcgg cattaccgcc ctcgtcggcc ccaacggtgc
     2941 gggcaaatcc accctgtttt cctttatggc gcggctgcga ccgcttgaaa gcggcagcat
     3001 cgcctaccga ggcaaaaatc ttgccgatac ccccaccgcc gaactcgcca aaaccctgtc
     3061 catcctcacc caagaaaaca gcatcatgag ccgcatcacc gtgcgcgacc tgctgatgtt
     3121 cggccgttac ccctaccatc aaggcagacc gactgccgaa tgccgccgta tcgttaacgg
     3181 tgcaatcgaa gaattccacc tgcaagacct ctccgaccgc tacctgaccg agctttccgg
     3241 cggccaacgc caacgcgcca tgattgcgat ggtgttctgc caaagcaccg actacgtcct
     3301 tttggacgaa ccgctgaaca acctcgatat gtatcacgcc cgctcgctca tgcaaatcct
     3361 gcgccggctg accgacgaac acaagcgcac caccgtcgtc gtattgcacg acatcaacca
     3421 ggcagcagcc tacgccgacc acgtcgtcgc catgaaaaac ggccaagtcg ccatgcaggg
     3481 caaacccaac gatattttca ccgccgcaaa catcaaaacc ctattcgata tggacgtcga
     3541 cgtcctcgat tacgaaggca aaaaattggt tatccaccat atctaaatcc gacaaaaagg
     3601 ccgtctgaac attcagacgg caacccatat cctgacaaaa ttaagacacg acaccggcag
     3661 aattgacatc agcataatat gcacatatta acagatatta atgccgaact acctaactgc
     3721 aagaattaaa taaataaata aataaataaa ttgcgacaat gtattgtata tatgcctcct
     3781 ttcatatata ctttaatatg taaacaaact tggtggggat aaaatactta caaaagattt
     3841 ccgccccatt ttttatccac tcacaaaggt aatgagcatg aaacactttc catccaaagt
     3901 actgaccaca gccatccttg ccactttctg tagcggcgca ctggcagcca caaacgacga
     3961 cgatgttaaa aaagctgcca ctgtggccat tgctgctgcc tacaacaatg gccaagaaat
     4021 caacggtttc aaagctggag agaccatcta cgacattgat gaagacggca caattaccaa
     4081 aaaagacgca actgcagccg atgttgaagc cgacgacttt aaaggtctgg gtctgaaaaa
     4141 agtcgtgact aacctgacca aaaccgtcaa tgaaaacaaa caaaacgtcg atgccaaagt
     4201 aaaagctgca gaatctgaaa tagaaaagtt aacaaccaag ttagcagaca ctgatgccgc
     4261 tttagcagat actgatgccg ctctggatgc aaccaccaac gccttgaata aattgggaga
     4321 aaatataacg acatttactg aag
//
LOCUS       DAWEYF010000154         4320 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.154, whole genome shotgun sequence.
ACCESSION   DAWEYF010000154 DAWEYF010000000
VERSION     DAWEYF010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4320
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.154"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..248)
                     /locus_tag="WGN93_001751"
     CDS             complement(<1..248)
                     /locus_tag="WGN93_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227626.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITR"
     gene            complement(245..391)
                     /locus_tag="WGN93_001752"
     CDS             complement(245..391)
                     /locus_tag="WGN93_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227627.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(408..746)
                     /gene="erpA"
                     /locus_tag="WGN93_001753"
     CDS             complement(408..746)
                     /gene="erpA"
                     /locus_tag="WGN93_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ0227628.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(878..1564)
                     /locus_tag="WGN93_001754"
     CDS             complement(878..1564)
                     /locus_tag="WGN93_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0227629.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            1752..2024
                     /locus_tag="WGN93_001755"
     CDS             1752..2024
                     /locus_tag="WGN93_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227630.1"
                     /translation="MKKTGKYLIYTAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2232..4160
                     /gene="dnaK"
                     /locus_tag="WGN93_001756"
     CDS             2232..4160
                     /gene="dnaK"
                     /locus_tag="WGN93_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ0227631.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
BASE COUNT         1324 a         1141 c          865 g          990 t
ORIGIN      
        1 ctccgggtaa taatatccaa acccaaatag ctgaaataat cgtgcaactc ttcccgtttc
       61 gcccaagtgc atttttcctc aaccagcact tgaggtttgg aatcgagcga ttcgatcaat
      121 ccttccgcct tttcctcgcc gagattctcc ctgaggcact cccggataag cccgcgatcc
      181 acttggggcg ggtaggaaac atatacatcg tacaaatcat ttcggtaatc tttactcatc
      241 tcaatcataa gggaacaaat acgcctgata ccgttccgcc cgttcctttc gggaaacccg
      301 attcatcttc aaacaatcgg attatatgtg aattcatccc gataatatat tttccaaaag
      361 taaaaatgcc gtctgaacgt tcagacggca tcacacaaac caagcggtca tacggaaaac
      421 gacgatccgc aaccgcaggt tgtttccgca ttcggattgc ggatgacgaa ttgcgaaccc
      481 tgcaaacttt ccgtatagtc gatttccgca ccgaccagat attgatagct catcggatcg
      541 accaaaaaga ccaaaccgtt tttctcaatt tcaaaatcgt cgtcgttttt gatttcgtca
      601 aaagtaaatc cgtactggaa acccgaacag ccgccgccat tgacaaaaac ccgcaatttc
      661 aaatcgggat tgttttcttc ggcaatcaaa tcggcaactt tggcacagca gctgtcagta
      721 aaaataatag ggctttcatc cgacatggtg ttattcctta atataatatt ttctgcattc
      781 tctctcaaac cccctttaaa ggcaagcagg cttcgccttt gaaaaaggaa ttgttccaat
      841 agataagttt gaccgcctgc aatttcaagc cccaaactca aatcgtcctg ccgaaccact
      901 cgacacgccc gataatctcc acatcatcgg tcaaatcgtt caaattgatt tcaaaagcag
      961 gataagcctc gtttgcagaa atcacattga taatcccgcc cggtacaatc tgtaaacgtt
     1021 taaccagcag attttcatta atccgcaaca catacagacc gtccctcggc gtattttcac
     1081 catgattgac caaaatcgaa tcgccgtcat tcaaaacccc ctccatcgaa tcccccttga
     1141 cggaaattac agacaggttt ttcgtatcgc gggtaacata attctcaatc caatgccgtc
     1201 tgaacgccat tgtaaatacc ggttcctcat gatcgacaaa ctgcccgtat cccgcagccg
     1261 cccgaatatc atatctcggc acaaagacaa actcgtccgt atcgacttca tttcccaagg
     1321 tatcgtaagc aagggatttt tttggggctt catccggaaa cggattaccc tccccggtca
     1381 gcagccaatc gatactacac cccttcaact gcttgatttt tttcaatgtt tcagactttg
     1441 gcagaccgcc ttcattccat atcctgctga agcccgcaat cgtcatttca atatcggatg
     1501 cgatttttgc ctgcctcgct tcgcttttcc ataaaaaaac cagtctgtct ttaaaggttt
     1561 ccataaatat ccttccactc cccttcattc aatcatctaa agtaaacatg aaatatattt
     1621 taccttagct atccaaaaaa cggaacaatt atgataaact aaatttaaat tatgattttt
     1681 cttacttaat acataatttt tcagattttt ccataggttt aatcctgaat tgacagaaaa
     1741 aggatagaaa aatgaagaaa accggcaaat atcttatcta tactgcggca tttaccgcat
     1801 tctgctttgc cttccaagaa aaccgttctg aagccaaaca gcccgacatc actttatccg
     1861 catccctgtg cgaacaattc aacatactga acgccaaaga tatggatgca gaacaagtct
     1921 ccctttccaa agaatgcgac atcatcgagt cttcacacga ctgggaaaaa gagtacggca
     1981 acttgaacga acaggaaatg ctcgccggca tcgtctacga ataaacctgc ctgccatttg
     2041 aaatattatg cttgaatgca ttggagccaa atgtattaaa tcaaatataa aaccaatata
     2101 ttcataaagt tatatactta tagccatgct gtagcttgaa acagcccgcc gcccgcccta
     2161 tttacagccc atcgggacaa aatgttccaa catatttctc aaaataagca aaatcaaata
     2221 ggattatcca catggcaaaa gtaatcggta tcgacttagg tacaaccaac tcttgtttgg
     2281 ccatttccga aaacggtcaa accaaagtta tcgaaaacgc agaaggcgca cgcaccacgc
     2341 cgtccgttat cgcttatttg gacggcggcg aaatcctcgt cggcgcgcct gccaaacgcc
     2401 aagcggtaac caacgccaaa aacactattt acgccgccaa acgtttgatc ggccacaaat
     2461 ttgaagacaa agaagtccaa cgcgacatcg aatctatgcc tttcgaaatc atcaaagcca
     2521 acaacggcga cgcatgggta aaagcacaag gcaaagagct gtctcctcct caaatttccg
     2581 cagaagtcct gcgtaaaatg aaagaagccg ccgaagctta cttgggcgaa aaagtaaccg
     2641 aagccgtgat taccgttccg gcctacttca acgacagcca acgtcaagcc accaaagacg
     2701 caggccgtat cgccggtttg gacgtaaaac gcatcatcaa cgagccgacc gcagccgctt
     2761 tggcattcgg tatggacaaa ggcgacaaca aagaccgcaa agtagccgta tatgacttgg
     2821 gcggcggtac tttcgatatt tccatcatcg aaatcgccaa cctcgacggc gacaaacaat
     2881 ttgaagtatt ggctaccaac ggcgatactt tcttgggcgg tgaagacttc gaccaacgct
     2941 tgatcgacta catcattgac gagtttaaaa aagaacaagg cattgatttg aaacaagacg
     3001 tcatggctct gcaacgtctg aaagaagctg ccgaaaaagc caaaatcgaa ttgtccagcg
     3061 gccagcaaac cgaaatcaac ctgccgtaca tcaccatgga cgcaaccggc ccgaaacact
     3121 tggcgatgaa aattacccgc gccaaattcg aaagcctggt tgaagacctg attgcccgct
     3181 ctatcgagcc ttgccgcacc gcattgaaag atgccggtct gagcactggc gacatcgacg
     3241 acgtgatttt ggtcggtggt caaagccgta tgccgaaagt acaagaagcc gttaaagact
     3301 tcttcggcaa agagccgcgc aaagacgtga accctgacga agctgtcgcc gtaggcgcag
     3361 cgattcaagg cgaagtgtta agcggcggcc gcagcgacgt attgctgctg gacgtaaccc
     3421 ctctgtcctt gggtatcgaa accatgggcg gcgtgatgac caagctgatt caaaagaaca
     3481 ccaccatccc gaccaaagcg tcgcaagtgt tctctaccgc cgaagacaac caaagcgcag
     3541 taaccatcca cgtactgcaa ggcgaacgcg aacgcgcttc tgccaacaaa tctttgggtc
     3601 agttcaactt gggcgacatc gcacccgcac cgcgcggtat gccgcaaatc gaagtcacct
     3661 tcgatattga cgccaacggt atcctgcacg tttccgccaa agacaaaggc actggcaaag
     3721 cagccaacat caccatccaa ggttcttcag gtttgagcga agaagaaatc gaacgcatgg
     3781 tgaaagatgc cgaagccaat gccgaggaag ataaaaaact gactgaattg gtcgcttccc
     3841 gcaaccaagc cgaagccctg attcactctg tgaaaaaatc tttggccgac tacggcgaca
     3901 aactcgacgc agccgagaaa gaaaaaatcg aagccgcgct gaaagaagcc gaagaagcag
     3961 ttaaaggcga cgacaaagcc gctatcgatg ccaaaaccga ggcgctgggc gcagccagcc
     4021 aaaaactggg ggaaatggtt tacgctcaag cacaagctga agcccaagca ggcgaaagcg
     4081 aacaagccaa tgcttctgca aagaaagacg atgatgtcgt agatgccgac tttgaagaag
     4141 taaaagacga caaaaaataa ttaataccgt ctgaaaaaag cgcgaaccgt ttgattcgcg
     4201 cttttttcaa ttgagataaa agaccatagc ataacagagg ttccaagttc atctaccgta
     4261 atattcccaa acccaagttc caactgttgt atcggttctc tggaaatttt ttatatagtg
//
LOCUS       DAWEYF010000155         4276 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.155, whole genome shotgun sequence.
ACCESSION   DAWEYF010000155 DAWEYF010000000
VERSION     DAWEYF010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.155"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            539..2266
                     /gene="ilvB"
                     /locus_tag="WGN93_001757"
     CDS             539..2266
                     /gene="ilvB"
                     /locus_tag="WGN93_001757"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ0227632.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDSLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADGKA"
     gene            2277..2768
                     /gene="ilvN"
                     /locus_tag="WGN93_001758"
     CDS             2277..2768
                     /gene="ilvN"
                     /locus_tag="WGN93_001758"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ0227633.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2835..3128
                     /locus_tag="WGN93_001759"
     CDS             2835..3128
                     /locus_tag="WGN93_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ0227634.1"
                     /translation="MSNIKIVALVTVKPEYTETLVAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3223..4236
                     /gene="ilvC"
                     /locus_tag="WGN93_001760"
     CDS             3223..4236
                     /gene="ilvC"
                     /locus_tag="WGN93_001760"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ0227635.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRTDLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1117 a         1022 c         1072 g         1065 t
ORIGIN      
        1 aatcaatata ttaagtcgtt gttagccctc ttggttctgt caatgccgtc caatacagtc
       61 cggtgcaatg agccattttc aggaagtatg gttgggaata tttttgatat atcaaaaata
      121 aaatcaagtt caatcaatat cccgagtctt tattgggatg aaaccctgta aattttacaa
      181 ttcttgatat cgaagaaggg tttttcacat ctgcccctcc tacacaaact gtcaacaatt
      241 tccatctttc aaaaaaggta ctcctgattt tattctttta aaatcaatca ataatttctc
      301 tgctttcaaa aaatattaaa agatgaaaga tttttcttga ttgaactgtc ggtttgcgtt
      361 atcgtttcta ctctttttca caaactctgt gttcctttcc aattgattgg ataatccgtc
      421 tgttgccgtg ttcccccaat gcgcgtaccc taaatcgctg cttggtggaa ttgcattaca
      481 ggtgctgtgg caaagcggtt tgtccctatt ggtttgaaac cgtataaaag aggtcgttat
      541 gcagttatca ggcgcgcaaa tcatagtgca gagtctcaaa gccgaaggtg tcgagtacgt
      601 tttcggttat cccggcggtg cggttatcga aatctacgat gcccttttcc aactcaataa
      661 attcaagcac attctgaccc gtcacgagca ggcggcagta cacgcggcag atgcgtatgc
      721 gcgcgtcagc ggtaaggtgg gcgtggcatt ggttacatcc ggcccgggcg ttaccaatgc
      781 actgaccggt attgctactg cctatacgga ttcgattccg atggtggtca tcagcgggca
      841 ggtaggcaat tccctgattg gtacggatgc gttccaagaa gttgatacgg tgggtattac
      901 ccgtccgtgc gtcaaacaca atttcctggt tacggacatc aatgagttgg cggaaaccat
      961 taaaaaggcg ttccaaattg ccgcaagcgg ccgaccgggg cccgtggtgg ttgatgtccc
     1021 gaaagatgtt acgcaggcga tggcgaaatt cagctatcct caggaagaca tttttatccg
     1081 ttcgtatcaa ccggttgttc aagggcatat cggtcagatt aaaaaggccg tgcagatgtt
     1141 ggcatctgcc aaacgtccgg tcgtctattt tggcggcggc gtggtgttgg gtaatgcttc
     1201 tgaagagctg acccgatttg tccgaatgac gggtgctccg tgcacgggta cgctgatggg
     1261 cttgggcgct tatccttccg gcgaccgcca attcctcggt atgctcggta tgcacggtac
     1321 ttacgaggca aaccttgcca tgcagaatgc ggatgtcgtt cttgccgtag gtgcgcgttt
     1381 tgacgaccgt gtggtttccg taccgtccaa atttttcgag aaggcgaaga aggttatcca
     1441 tatcgatgtc gatccttcca gcatcgccaa acgcgtgaag gcggacattc cgattgtcgg
     1501 cgacgtgaaa aacgttttgt ccgagatggt tgcgctgtgg caaaaacaag agtccgtgcc
     1561 gtctgaagat gctttgggca aatggtggaa aaccatagag gaatggcgtt cccgcgattg
     1621 cttgtggttt gacaacggca gcgaaattat caagccacaa tatgtgattc agaagcttgc
     1681 cgagattacc ggcaattcgg caatcatcac atcggatgta gggcagcatc aaatgtttgc
     1741 ggctcaatat tatcccttcg aacgtccgcg ccaatggctc aactccggcg gtttgggtac
     1801 gatgggcgtg ggtctgcctt atgcgattgg tgcaaaactt gccgccccgg atcaagacgt
     1861 attctgtatc accggcgacg gctcgatcca gatgaacatc caagagctgt ccacctgttt
     1921 ccaatatcgg attccggtta acgtcattac actgaacaac ggttatctcg gtatggtacg
     1981 ccagtggcag gaaatatatt acggcggacg agagtcggaa acctatttcg attctttgcc
     2041 cgatttcgtc aaacttgccg aggcatacgg ccatatcggt atccgcgtgg acaagaagtc
     2101 tgatgtggaa ggtgccttgt tggaagcatt gaaccaaaaa gacagtctgg tgtttatcga
     2161 cttcctgacc gaccagaaac agaatgtgat gcctatggtt ggcaacggca aaggtttgga
     2221 cgaaatggta cttccgccgc atatgcgtgc ggacggaaag gcgtaaggag agacaaatgc
     2281 gacatatctt atctgttctg atcgaaaacg aatcaggtgc gatgagccgc gtggtcggtt
     2341 tgttctctgc acgcgattac aatatcgatt ctttggcggt tgcgccgacc gaagacaaaa
     2401 ccctgtcccg tatgaccatc gttacacacg gcgacgagca ggttatcgaa caaatcacca
     2461 agcaactcaa taaattgatt gaagtgatta aagtggtcga tttgaatgaa agccgttttg
     2521 tcgaacgcga actgatgttg gtaaaagtcc gtgccgccgg caaagaccgc gacgaatttt
     2581 tacgcttgac cgaaatctac cggggcagca tcatcgacgt aaccgaccgc agctatacga
     2641 ttgaaattac cggctcgacc gacaagctgg attccttttt ggaaacggtc ggacgcgccc
     2701 aaattttgga aaccgtacgt acaggcgcgg ccggcatcgg tcgcggtgag cgtattttga
     2761 aaatttaacg ccgtaacctt tcagacggca cggtatttga atgccgtctg aaaaacgaac
     2821 ggcaggagag atttatgtcg aacattaaaa ttgtcgcact ggttaccgtc aaaccggaat
     2881 acacagaaac actggtagca cagtttaaag aactggtcaa agccagccgt gcagaagagg
     2941 gcaacatcag ctacgatctc catcaggaaa tcggcaaacc gaaccgtttt gttttcgtgg
     3001 aaaattggaa atcccaagca gctattgacg aacataacgc cagcgcgcat ttccaagcct
     3061 tcgtccagtc cgtcgacggc aaaaccgaag cgttggaaat cgtattgatg aatgaagttg
     3121 ccgattaagc ggtacactct gtttaacccg tccgaagccg ctcaacattt taaggcttcg
     3181 acaactattt accttacaat catttacctt aaaggaaatc aaatgcaagt ctattacgat
     3241 aaagatgccg atctgtccct aatcaaaggc aaaaccgttg ccatcatcgg ttacggttcg
     3301 caaggtcatg cccatgccgc caacctgaaa gattcgggtg taaacgtggt gattggtctg
     3361 cgccaaggtt cttcttggaa aaaagccgaa gcagccggtc atgtcgtcaa aaccgttgct
     3421 gaagcgacca aagaagccga tgtcgttatg ctgctgctgc ctgacgaaac catgcctgcc
     3481 gtctatcacg ccgaagttac agccaatttg aaagaaggcg caacgctggc atttgcacac
     3541 ggcttcaacg tgcactacaa ccaaattgtt ccgcgtaccg acttggacgt gattatggtt
     3601 gctcccaaag gtccgggtca taccgtacgc agtgaataca aacgcggcgg cggcgtgcct
     3661 tctctgattg ccgtttacca agacaattcc ggcaaagcca aagacatcgc cctgtcttat
     3721 gcggctgcca acggcggcac caaaggcggt gtgattgaaa ccactttccg cgaagaaacc
     3781 gaaaccgatc tgttcggcga acaagccgta ttgtgcggcg gcgtggtcga gttgattaaa
     3841 gcaggttttg aaaccctgac cgaagccggt tacgcgcctg aaatggctta cttcgaatgt
     3901 ctgcacgaaa tgaaactgat tgttgacctg attttcgaag gcggtattgc caatatgaac
     3961 tactccattt ccaacaatgc ggagtacggc gaatacgtta ccggccctga agtggtcaat
     4021 gcttccagca aagaagccat gcgcaatgcc ctgaaacgca tccaaaccgg cgaatacgca
     4081 aaaatgttta tccaagaggg taatgtcaac tatgcgtcta tgactgcccg ccgccgtctg
     4141 aatgccgacc accaagttga aaaagtcggc gcacaactgc gtgccatgat gccttggatt
     4201 actgccaaca aattggttga ccaagacaaa aactgattgt tttcaaacgg gactgcctac
     4261 acatcgtgta ggcagt
//
LOCUS       DAWEYF010000156         4232 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.156, whole genome shotgun sequence.
ACCESSION   DAWEYF010000156 DAWEYF010000000
VERSION     DAWEYF010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.156"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            38..1450
                     /locus_tag="WGN93_001761"
     CDS             38..1450
                     /locus_tag="WGN93_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ0227636.1"
                     /translation="MLLLPLLASAAYAEETPREPDLRSRPEFRLHEAEVKPIDREKVP
                     GQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGIRVILPIYLQQAQQDKMLA
                     LYAQGILAQTDGRVKEAISHYRELIAAQPDAPAVRMRLAAALFDNRQNEAAADQFDRL
                     KAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNINQAPKRQQYGKWTFPKQV
                     DGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFNDMTAGVSGGIGFADRRK
                     DAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLSSAEWGRLKNTRRARSDNT
                     HLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRYGLRFAWGQEWGGSGLSSL
                     LRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRALHFKGITPRLTLSHRETRS
                     NDVFNEYEKNRAFVEFNKTF"
     gene            complement(1651..2619)
                     /locus_tag="WGN93_001762"
     CDS             complement(1651..2619)
                     /locus_tag="WGN93_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227637.1"
                     /translation="MKLTLAIPSLNLDEDETRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDSLHGSSQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYASVLQQWEEHWFAP
                     IYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            2697..3989
                     /locus_tag="WGN93_001763"
     CDS             2697..3989
                     /locus_tag="WGN93_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ0227638.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
BASE COUNT          916 a         1119 c         1317 g          880 t
ORIGIN      
        1 ttgtgggaag acatttatgc ctgcacgaaa cagatggatg ctgctgctgc ctttattggc
       61 aagcgcggca tatgccgaag aaacaccgcg cgaaccggat ttgagaagcc gtcccgagtt
      121 caggcttcat gaagcggagg tcaaaccaat cgacagggag aaggtaccgg ggcaggtgcg
      181 ggaaaaagga aaagttttgc agattgacgg cgaaaccctg ctgaaaaatc ccgaattgct
      241 gtcccgcgcg atgtattccg cagtggtctc aaacaatatt gccggtatcc gcgttatttt
      301 gccgatttac ctacaacagg cgcagcagga taagatgttg gcactttatg cacaagggat
      361 tttggcgcag acagacggta gggtgaaaga agcgatttcc cattaccggg aattgattgc
      421 cgcccaaccc gacgcgcccg ccgtccgtat gcgtttggcg gcggcattgt ttgacaacag
      481 gcagaacgag gcggcggcag accagttcga ccgcctgaag gcggaaaacc tgccgccgca
      541 gctgatggag caggtcgagc tgtaccgcaa ggcattgcgc gaacgcgatg cgtggaaggt
      601 aaatggcggc ttcagcgtca cccgcgaaca caatatcaac caagccccga aacggcagca
      661 gtacggcaaa tggactttcc cgaaacaggt ggacggcacg gcggtcaatt accggctcgg
      721 cgcggagaaa aaatggtcgc tgaaaaacgg ctggtacacg acggcgggcg gcgacgtgtc
      781 cggcagggtt tatccgggga ataagaaatt caacgatatg acggcaggcg tttccggcgg
      841 catcggtttt gccgaccggc gcaaagatgc cgggctggca gtgttccacg aacgccgcac
      901 ctacggcaac gacgcttatt cttacaccaa cggcgcacgc ctttatttca accgttggca
      961 aaccccgaaa tggcaaacgt tgtcttcggc ggagtggggg cgtttgaaga atacgcgccg
     1021 ggcgcgttcc gacaataccc atttgcaaat ttccaattcg ctggtgtttt accggaatgc
     1081 gcgccaatat tggatgggcg gtttggattt ttaccgcgag cgcaaccccg ccgaccgggg
     1141 cgacaatttc aaccgttacg gcctgcgctt tgcctggggg caggaatggg gcggcagcgg
     1201 cctgtcttcg ctgttgcgcc tcggcgcggc gaaacggcat tatgaaaaac ccggcttttt
     1261 cagcggtttt aaaggggaaa ggcgcaggga taaagaattg aacacatcct tgagcctttg
     1321 gcaccgggca ttgcatttca aaggcatcac gccgcgcctg acgttgtcgc accgcgaaac
     1381 gcggagtaac gatgtgttca acgaatacga gaaaaatcgg gcgtttgtcg agtttaataa
     1441 aacgttctga ttgctgttcc ttttcggagg aaaccctgcc ggcggcggta tcacggcggg
     1501 catcggcggc tttcgggcgg tgctttgcgt gccgccgcgt gtgcggaaac gcattccggt
     1561 ttttccggca taacggcgat gcgaggtaaa atgccgtctg aaacccgatt cgggcttcag
     1621 acggcattgt cgcggttgcg gcgggcgggt tcaccagatt ccgtcaaagg ttttcgcgcc
     1681 gcgccaaaat ttccacctgt cggcgggttt gaaggtcagc gtaccgccgt gttgtccgtc
     1741 cgtggtgatg tccagccgtt tgattttgcc ggtacggacg gcttcgtaga tcggtgcgaa
     1801 ccagtgttct tcccactgct gtaaaaccga tgcataccgc tccctgtccc ctgtcagggc
     1861 ggtcaggcgc aaatcgtcca taaacaggat atggtgcgtg tcgggcaggt gtgccgccgt
     1921 ttcttcatag gcgcggaagt tgtcgggcaa tgcgcggcgg tcggggtgga aacggctcca
     1981 aaccgtatcg gcgaaaagcg tgccgccttg actgcttccg tgcagactgt cccaaagcca
     2041 taagccgttc aactcgggca gcccgcgttt cttgcggtta tggttgacgg ggtgcgccgc
     2101 cagccacatt tggatttcgg tttggacgcg cagccattcc aacgcgtctt ccccgtccgg
     2161 ttgatcgtcc gcacccaaca gtccgcccaa gtccaaaacg ggcttcgcgc cccagcggta
     2221 cgcgcaagga agggaaacca gccataattc gggcaggacg ggaacgaaac gccatggaat
     2281 gtcgccgtaa aacgccgaca ggtcgcggca gagccgttcc gcttcatccg taccgacgtt
     2341 cagatattcc gccgttagca catttgcctg atgcatcccc atcttttgcc agacgggcgt
     2401 ggcgagcgcg acggcttcag acggcatatt caggctttgt gccgcgcgtt ccgccagtct
     2461 gccgcaccac aaataacgcg cgtaaaatgc cgaagccgtg cagctttggc ggtgcagcga
     2521 gccgtattgc aggattttgt tgaaggcggg caggcagaga ggtattcggg tttcgtcttc
     2581 atccaaattg agcgagggaa tggcgagggt gagtttcatc gtttgacgtt tcagaaatgc
     2641 aggtcaggcg caacattata gaggattcgg cgcaaacgcc gtcaaaaagg aacaatatgg
     2701 ctgtcttccc actttcggca aaacatcgga aatacgcgct gcgcgcgctt gccgtttcga
     2761 ttattttggt gtcggcggca tacattgctt cgacagagag gacggagcgc gtcagaccgc
     2821 agcgcgtgga acaaaaactg ccgccgctgt cttggggcgg cagcggtgtt cagacggcat
     2881 attgggtgca ggaggcggtg cagccaggcg actcgctggc ggacgtgctg gcgcgttcgg
     2941 gtatggcgcg ggacgaaatt gcccgaataa cggaaaaata tggcggcgaa gccgatttgc
     3001 ggcatttgcg tgccgaccag tcggttcatg ttttggtcgg cggcgacggc ggcgcgcgcg
     3061 aagtgcagtt ttttaccgac gaagacggcg agcgcaatct ggtcgctttg gaaaaaaaag
     3121 gcggcatatg gcggcggtcg gcttctgagg cggatatgaa ggttttgccg acgctgcgtt
     3181 cggtcgtggt caaaacgtcg gcgcgcggtt cgctggcgcg ggcggaagtg cccgtcgaaa
     3241 tccgcgaatc cttaagcggg attttcgccg gccgcttcag ccttgacggt ttgaaggaag
     3301 gcgatgccgt gcgcctgatt tacgacagcc tgtatttcca cgggcagcag gtggcggcgg
     3361 gcgatatttt ggcggctgaa gtcgttaagg gcggcacaag gcatcaggcg ttctattacc
     3421 gttcggacaa ggaaggcgga gggggcggca attattacga tgaagacggc agggtgttgc
     3481 aggaaaaagg cggcttcaac atcgagccgc tggtctatac gcgcatttct tcgccgttcg
     3541 gctaccgcat gcaccccatc ctgcacactt ggcggctgca cacgggcatc gattatgccg
     3601 caccgcaggg aacgccggtc agggcttccg ccgacggcgt gattaccttt aaaggccgga
     3661 agggcggata cggcaacgcg gtgatgatac gccacgccaa cggtgtggaa acgctgtacg
     3721 cgcacttgag cgcgttttcg caggcacaag gcaatgtgcg cggcggcgag gtcatcggtt
     3781 ttgtcggttc gacagggcgt tcgaccgggc cgcacctgca ttacgaggca cgcatcaacg
     3841 ggcagcccgt caatcctgtt tcagtcgcat tgccgacacc cgaattgacg caggcggaca
     3901 aggcggcgtt tgccgcgcag aaacagaagg cggacgcgct gcttgcgcgc ttgcgcggca
     3961 taccggttac cgtgtcgcaa tcggattgaa gtttgaaccg gcgacgaaaa caatgccgtc
     4021 tgaaaatctg caaacaggtt ttcagacggc atttatagtg gattaacaaa aaccagtacg
     4081 tcgttgcctc gccttagctc aaagagaacg attctctaag atgctgaagc accaagtgaa
     4141 tcggtttcgt actatttgta ctgtctgcgg cttcgtcgct ttgtcctgat ttttgttaat
     4201 ccaccataca gtcgattaaa ataaaactaa gt
//
LOCUS       DAWEYF010000157         4164 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.157, whole genome shotgun sequence.
ACCESSION   DAWEYF010000157 DAWEYF010000000
VERSION     DAWEYF010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.157"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(145..942)
                     /locus_tag="WGN93_001764"
     CDS             complement(145..942)
                     /locus_tag="WGN93_001764"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ0227639.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            1097..3946
                     /gene="uvrA"
                     /locus_tag="WGN93_001765"
     CDS             1097..3946
                     /gene="uvrA"
                     /locus_tag="WGN93_001765"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ0227640.1"
                     /translation="MYKHHPQHSHDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMESGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAQCENSVTGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFASVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGRIIACGSPEQVAKVKGSYTGKYLKVVLR"
     gene            3980..>4164
                     /locus_tag="WGN93_001766"
     CDS             3980..>4164
                     /locus_tag="WGN93_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227641.1"
                     /translation="MKPLKTLEFGFVDAANYRRRENKDLFNRIFVKGEYLDELCEPNI
                     SFLIGEKGTGKTAYAVY"
BASE COUNT         1077 a         1227 c         1007 g          853 t
ORIGIN      
        1 ttctgataaa tcaccgtaac gttaaatttc cagattccca ttttcgtgaa cataacggtg
       61 tgaacattag caaaaattca aaaaaccaaa cttcctcatt cgtgtgaatg atggtactga
      121 tattttctat ttcagttcgc aaaattaatc tttcaacaca tcttgcacag ccgcctgaat
      181 cttagccgcc gctgcctcga tttgccgttg ttcggcagat gggtttgccg ctgtttcaac
      241 cggagcagtt tgtaaagcag gctcagactc aggctcggat tcgatttgcg gcgcagtcag
      301 cggcaaacgc gccaatacag tgctaacgcc agttacttta tcgccaatcg ccacttgcgc
      361 ctgcgcatcg acaggcagat acatatccac gcgcgaaccg aagcggataa agccataacg
      421 ttcgccgcgg gacagtttcg cacctgcttg ggtgtagcac aaaatacggc gcgccaccaa
      481 accggccact tgaacaaaag taatttcacg accggaagcc gtagtcgcca acaccgcatt
      541 acgttcgttt tccgtgctgg ctttgtccaa atccgcattc acgaatttgc ctttgttata
      601 gaccactttc gttaccgtac aatcggcagg cgatttttgc gaatgcacgt tgaacacgtt
      661 cataaaaata ctgattttca aagcatcgac atcacgatac ggatcgcgtg cgcgctcgac
      721 caccacgata cggccgtcaa ccggactcaa cactgcttca ggattttgcg gaatctcacg
      781 cgcagggtcg cggaaaaact gcagggcaaa tacggtaaac acccaaaacg gcaaagacca
      841 ccagccgcaa cacatcgaca ccagcaggct caaagccaaa ccgccgccaa taatcggcca
      901 gccctcacgg gcgataatcg ggtgggggta aagacggttc atttgtcatc cttttgttca
      961 agcgggttaa aattgccgcc attataacgg aatccgccgc gttccgccga caaatgccgt
     1021 ctgaacgcgg cttcagacgg catccgagaa agtgctacaa taccagtttt cctttatttt
     1081 tcaggcggca tccattatgt acaagcatca tccccaacat tcgcacgaca acgacaccat
     1141 ccgcatccgc ggcgcgcgca cgcataattt gaaaaacgtc gatttggaca ttccgcgcca
     1201 caagctcgta gtggtaacag gcttatcggg cagcggcaaa tcgtcgctgg catttgatac
     1261 tttatatgcc gaaggtcaac gccgttatgt cgagagcctt tccgcctatg cgcggcagtt
     1321 tttgcagatg atggacaaac ccgatgtcga tttgattgaa ggtctgtcgc ccgcgatttc
     1381 catcgagcag aaatccacca gccacaatcc gcgttccacc gtcggcacgg ttacggaaat
     1441 ccacgactat ctgcgccttt tgtacgcacg cgtcggcaca ccctactgcc ccgaacacaa
     1501 gctgccgcta tccagccaaa ccgtatctca aatggttgat gccgtcttaa aactgccgga
     1561 agacacgcgc gtgatgattc tggcgccggc agttcgtgag cgtaagggcg agtttgtcga
     1621 cttctttgcc gacttgcagg cgcaaggctt tgcccgtgtg cgcgtggacg gcgaagttta
     1681 tcagcttgac gaagtgccga agctggagaa aaacatcaag cacaatatcg acgtggtcat
     1741 cgaccgcgtg aaagtgaagg cggacatcaa gcagcggctg gcggaaagtt ttgaaaccgc
     1801 actgcgccac ggcaacgagc gcgcgctggc gatggaaatg gaaagcggcg aagaacattg
     1861 gttttccgcg cgtttcgcct gtcccgtatg ttcatacagc ctgcccgaat tagagccgcg
     1921 cctgttttcg ttcaacaacc cgatgggctc ctgcccaact tgcgacggct tgggcaacac
     1981 caacttcttc gatcccgaaa aagtggtcgc gcatcccgaa ttgtcgctgg caacgggcgc
     2041 gattgacggc tgggataagc gcaaccagtt ctatttccaa atgattcagt cgctggcgcg
     2101 gcattacggt ttcgatgtgc aggctgcttg ggaaacgctg cctgaaaaag tcaaaaaagt
     2161 cgtgctgcac ggctcgggca aggaagtcat tgatttcacc tacctatccg aacgcggcac
     2221 caccttcaac cgcagccacg ccttcgaagg catcattccc aatctcgaac gccgctaccg
     2281 cgaaaccgac agcgaaaccg tgcgcgaaaa actgcgtgaa taccagaacc accgcgcctg
     2341 cccgagctgc ggtggtgcac gtttgcgcaa agaagcccgc tacgtttacg tcagcggcga
     2401 accgctgcac gaagtttccg cctggccgct caccaaaacc caccaattct ttgaaacact
     2461 ggatttagac ggcaacaaaa aacaaatcgc cgaaaaaatc ctcaaagaaa tcaccgaacg
     2521 cctcggcttc ctgattaacg tcgggctgga ttacctgaat ttaagccgct ccgccgaaac
     2581 cctctccggc ggcgaagccc agcgcatccg cctcgccagc caaatcggca gcggcctgac
     2641 cggcgtgatg tatgtactgg acgaaccctc catcggcctg caccagcgtg acaatgaccg
     2701 cctgctggcc accctcaaac gactgcgcga tttgggcaac agcgtgattg tggtcgaaca
     2761 cgacgaagac gccatccgcg aagccgattt cgtggtcgat atgggccccg gcgcaggcga
     2821 acacggcggc aacgtactga ttgccgacac gcccgaaaac gtcgcccaat gcgaaaactc
     2881 cgttaccgga caatacctca gcggcaaaaa atccattgcc gtgccgtctg aacgcacgcc
     2941 cgtcaatccc gaccggatgc tcgtcctcaa aggcgcacgc ggcaacaatc tcaaaaacgt
     3001 tacccttgag ctgccgctcg gtttgattac ctgcatcacc ggcgtatccg gcagcggcaa
     3061 atccaccctg attaacgaca ccctcgccaa aattaccgcc cgcgaactca accgcgccca
     3121 agaagaaccc gccccatacg acgacatccg cggcctcgaa cacctcgaca aagtcatcaa
     3181 cgtcgaccaa tcccccatcg gccgcacccc acgctccaat cccgccacct acaccggcct
     3241 gttcaccccc atccgcgaac tcttcgccag cgtacccctc tcgcgtgaac gaggctacaa
     3301 cgtcggcaga ttctccttca acgtcaaagg cggccgctgc gaagcctgcc aaggcgacgg
     3361 cgtgattaaa gtcgaaatgc acttcctgcc cgacgtgtac gtcccctgcg aagtctgcca
     3421 cggcaaacgc tacaaccgcg aaacgctcga aatccaatac aaaggcaaaa acatcagcca
     3481 agtcctcgac atgaccgtcg aagaagcccg cgaatttttc gacgccgtcc ccaccgtatc
     3541 gcgcaaactg caaaccctga tggacgtagg tctcggctac atccgcctcg gccaatccgc
     3601 caccaccctc tccggcggcg aagcccagcg cgtcaaactc gccttggaac tctccaaacg
     3661 cgacaccggc agaacactct acatcctcga cgaacccacc accggcctac acttcgccga
     3721 catcgccctg ctgctggaag tcataggtcg tctgaaaggc aaaggcaact cgattgtgat
     3781 tatcgagcat aatctagacg tgattaaaac cgccgattgg attgtggact tagggccgga
     3841 aggcggcgat ggcgggggca ggattattgc ttgtggtagc cctgagcagg tggcgaaagt
     3901 taaggggagt tatactggga agtatttgaa ggtggttttg aggtaagttt aattcaaaat
     3961 taaataggag attattaaga tgaaaccgtt aaaaacatta gaatttggat ttgtggatgc
     4021 tgcaaactac agaagaagag aaaataaaga tttatttaac cgaatatttg taaaaggaga
     4081 atatttggat gaattatgtg aaccaaatat ttcgttttta atcggagaaa agggaactgg
     4141 aaagacagca tatgctgttt attt
//
LOCUS       DAWEYF010000158         4124 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.158, whole genome shotgun sequence.
ACCESSION   DAWEYF010000158 DAWEYF010000000
VERSION     DAWEYF010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.158"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..142
                     /locus_tag="WGN93_001767"
     CDS             <1..142
                     /locus_tag="WGN93_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HEZ0227642.1"
                     /translation="VGIGGGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRHI
                     QT"
     gene            272..1708
                     /locus_tag="WGN93_001768"
     CDS             272..1708
                     /locus_tag="WGN93_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ0227643.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSIAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTHQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQFNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLTFVVFNTANPD
                     DAGAVFNALFANANGWNAPQQADMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1719..2702
                     /locus_tag="WGN93_001769"
     CDS             1719..2702
                     /locus_tag="WGN93_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ0227644.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGET
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2699..3892
                     /locus_tag="WGN93_001770"
     CDS             2699..3892
                     /locus_tag="WGN93_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ0227645.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRIA
                     RQGQTMFWSWQNAMGGVCSMKNWLNHGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
BASE COUNT          879 a         1345 c         1056 g          844 t
ORIGIN      
        1 cgtcggtatc ggcggcggcg cgctgctggg gcattgggtt acgcaatatg tcggcatttc
       61 ccgtatcggc atcgccggta tgcttgcggc ggcggccggg ctgtggctgt gcctgaactt
      121 gaaccgccat atccaaacct gaccgcgcga tgccgtctga agcccctccc gcccttcaga
      181 cggcattttg attgaagaaa tatccgcccc tgcttaaaat aacgggcttt gccgtgtttt
      241 aacgcctatt ttcttattcc aaggatggtt tatgccgctg ctgtctgtcg agttcgcact
      301 gttctttctc gccttcctgc cgatttactg gggcttggcg aaatacccgt ccgtccaaaa
      361 cctgctgctt ttggctgccg gtatgggctg gctctaccat atcggccccg tatttgcggc
      421 aatcgtcgtc ctttattcct cctgcgtgta ccttttgggc gaactgctcc gttccgatcg
      481 cgaaaatacg cgccgctttt ggctggggtg cggcattgcc gtctcgctga ccgtcttggg
      541 ctttttcaaa tatttcgatt ttttccgccc gctgattgca caatatgccg gacaaggcgg
      601 cgcaatcgac atcctgatgc cgctggggct ttcgtattac accttccagt caatcgccta
      661 tttggtttac tgcttccgtg cgccgcacgc cgcgcgtttc gagtggcacg aactgctgct
      721 gcacctgagt tttttcccca ccgttacctc cggcccgatt atccgcgccg ccgcattcaa
      781 aagcgcggac ggcgagcagg cgggcgcatt ggcgcaaatc cgtacccacc aaccacgctc
      841 acccgtccgc cccgcactcg ccgtttccct gattctgctg ggtattgcca aaaaatggtg
      901 gctggcgggg atgctcgcag aaaactgggt atcgcccgta tttgaaaatc ccgcccaatt
      961 cgacggctgg ggcgtattgg cgggcgtgta cggctatacc ttccaactct ttttagactt
     1021 ttccggatat tccgacttgg ttatcggaat ggcaatgctg ctgggcttcc ggctgcccaa
     1081 aaacttctcc gcaccgcttc gtgccgcgaa tatccgcgca ttttgggaca aatggcacat
     1141 cagcctttcc acctggatac gcgactacat ctacatcccc ttgggcggca gcaaaaaagg
     1201 ctttttgcgg acacagttca acctgatggc ggcaatggtg ctctcaggca tctggcacgg
     1261 ctacggctgg aacttcctca tttggggtgc actacacggc acggcgctgg tgctgctcaa
     1321 cacgggcgac cgctatttcg gacgcaacgc actatgccgt ctgaaatacc ttgcgccgct
     1381 ctcgtggttt gttaccttcc atttcgtctg cctgaccttc gtcgtcttca ataccgcaaa
     1441 ccccgacgat gccggcgcgg ttttcaatgc cctctttgcc aatgccaacg gctggaatgc
     1501 gccgcaacag gcggatatgc tgctgcttgc ctcgtttgca tccgtgatgc tgctctaccc
     1561 ttacctgcaa cgcgctttcg acggcgcggt caaaggtttg gaaaaaatcc cgatgtggct
     1621 gtggtttatc cccgtttccg ccgtcctgct gctgattatc gtattggccc cctcggggat
     1681 acccggcttt atttatgcca atttttaagg gtttggacat gaaaaacttt ctttcccttt
     1741 tcgcctccat actgatgtct gccctgattg ccgtgtggtt cagccaaaac cccatcaacg
     1801 cctactggca gcagacctac caccgcaaca gtccgctcga accgcttgcc gcctacggat
     1861 ggtggcggag cggtgtggcg ttgcaagaaa acgcctacgc cctttcagac ggcatcaaag
     1921 ccttcctgtc cggcgaaacg ccgccgacgg ctcaagacgg cggttcggca gatatgccgt
     1981 ctgaagccgc cgcatcagaa gccgtccctc aaaccggtga aacagaatgg aaacaagaca
     2041 ccgaagccgc cgccgtccgc agcggcgaca aagtcttttt tgccggcgac tcgctgatgc
     2101 agggcgttgc acccttcgtg caaaaaagcc tgaaacagca atacggcatc gaatccgtca
     2161 acctcagcaa acaaagcacg gggctgtcct acccctcatt cttcgactgg ccgaaaacga
     2221 ttgaagaaac cctgaaaaaa catcccgaaa tcagcgtgct cgccgtcttc ctcggcccga
     2281 acgacccgtg ggatttcccc gtcggcaaac gatacctcaa attcgcttcc gacgaatggg
     2341 cgcaagaata cctgaaacgc gtcgaccgca tccttgaagc cgcacacacg caccgcgtcc
     2401 aagtcgtctg gctcggcatc ccctatatga aaaaagccaa gctcgacggg cagatgcgct
     2461 acctcgacaa actgctttcg gaacacctgg aaggcaaaat catcctgatt cccaccgcgc
     2521 acaccctgag cggcggggaa gaccgctaca ccgactccgt caacgtcaac ggcaaacccg
     2581 tccgctaccg cagcaaggac ggcatacact ttaccgccga aggacaaaaa ctgctggcgg
     2641 caaaaataat ggaaaaaatc gtttttgaac caagtacgca accatcaagt acacagccat
     2701 gaaccccaaa cacctcatcg cattttccgc cctgttcgcc gccacgcagg cagaagccct
     2761 gcccgtcgcc tccgtcagcc tcgacaccgt taccgtttcc ccgtccgccc cctacaccga
     2821 tacaaacggg ctcttgaccg actacggcaa cgccgccgcc tcgccttgga tgaaaaaact
     2881 ccgatccgtc gcacaaggca gcggcgagac cttccgcatc ctgcaaatcg gcgactcgca
     2941 taccgccggc gacttcttta ccgacagcct gcgcaaacgc ctgcaaaaaa cttggggcga
     3001 cggcggcata ggctgggttt accccgccaa cgtcaaaggg cagcgcatgg cggccgtccg
     3061 gcacaacggt aactggcaaa gcctcaccag caggaacaat agcggagact tcccgctcgg
     3121 cggcatcctc gcccacaccg gcagcggcgg cagcatgacc ctgaccgcat cggacggcaa
     3181 gaccggcaaa cagcgcatct ccctgtttgc caaacccctg ctcgccgaac aaaccctgac
     3241 cgtcaacggc aacaccgtct ccgccaacgg cggcggctgg caggtactgg atacgggcgc
     3301 ggcactccca ctgaccatac agaccgaaat gccgtgggac atcggcttca tcaacatcga
     3361 aaatcccgcc ggcggcatta ccgtttccgc catgggcatc aacggcgcac aattgaccca
     3421 ttggtcgaaa tggcgtgccg accgtatgaa cgaccttgcc caaaccggcg ccgatttggt
     3481 tatcctttcc tacggcacca acgaagcctt cggcgacaac atcgacattg ccgacactga
     3541 acaaaaatgg ctggataccg tccgccaaat ccgcgacagc ctgcctgccg ccggcatcct
     3601 catcatcggc gcacccgaat ccctgaaaaa cacgctcggc gtatgcggca cacgccccgt
     3661 ccgcctgacc gaagtccaac agatgcagcg gcgcatcgcc cgtcaggggc agacgatgtt
     3721 ctggtcttgg caaaacgcga tgggcggcgt ttgcagcatg aaaaactggc tcaaccacgg
     3781 atgggccgcc aaagacggcg tacacttctc cgccaaaggc taccggcgcg cggcggaaat
     3841 gctcgccgac agcctcgaag aactcgtccg cgccgccgca atcaggcaat aatcggacag
     3901 ggggcggacg gtatttccgc aacaggggga tgccgtctga aacgcatacc ttcatattgc
     3961 ttcagacggc atagccaccc cgcgcacggt ttgccagatg caaccggcat tcgcctcagg
     4021 catcggaagg acgcaggcga acctccggca tacggcgcaa aggcggcgtt tgatatgccg
     4081 tctgaaggca aagatgataa actgccgcct tccgttttca gacg
//
LOCUS       DAWEYF010000159         4017 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.159, whole genome shotgun sequence.
ACCESSION   DAWEYF010000159 DAWEYF010000000
VERSION     DAWEYF010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4017
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.159"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(1060..1449)
                     /locus_tag="WGN93_001771"
     CDS             complement(1060..1449)
                     /locus_tag="WGN93_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ0227646.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHAEQAVYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLAEILLVLQELEKQAAR"
     gene            complement(2022..2147)
                     /locus_tag="WGN93_001772"
                     /pseudo
     CDS             complement(2022..2147)
                     /locus_tag="WGN93_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(2193..3326)
                     /gene="carA"
                     /locus_tag="WGN93_001773"
     CDS             complement(2193..3326)
                     /gene="carA"
                     /locus_tag="WGN93_001773"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ0227647.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYASGLIIRDLPLLHSNFRASESLHDYL
                     VRNQTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKSFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT          906 a         1036 c         1050 g         1025 t
ORIGIN      
        1 aataacggcg tattgccttt gattataatt aaaaggaaat gcttcaatta ttctattttt
       61 gtttctcata tcattaagca aatactttaa attattgaaa ttaataggta ttgacatatt
      121 taaactcctg cgaatatgtt gcaataaacg tagcaatcgt aggttgggtt gaaaacccaa
      181 cacaaaccgc ttaattgtct aaaatgttgg gtttgctaac ctaacttgta tatcgaaacc
      241 cccgtattgt agcaagccgt agcccgtatg tagggtatgt gcggtacgta tgcacgcgtt
      301 ctccattttc cctgcaaccc caacccaccg tgtgcgtgcc ttgcggcaca caccctaccg
      361 atgggttcaa aggtcgtctg aaaaaacgct cgcggcattt gttccatctt ccttgcgata
      421 aaggctacct gaaaaattcc tgctgttgat atctcgggca ttctttctca aaccgcctgc
      481 aactgccaaa tctgctgcaa cctgccccct cccccgtggg ggagggttgg ggagagggca
      541 ttccccgaat ttcggcaacc tttcccaaca actcaaccac cgaaatacaa gccttgtggc
      601 ttgttgccct ctctctagct ctctcccacg ggagagagga cggagtggct gtagggctaa
      661 gggttctgca aggaaacagg ttgtgcaggt tgctttttgc ttttcagacg acctgaaatc
      721 aacggtaaat ccaagtcgct tttcaaaccg cctgcaaccg caaaatctgc tgaaacctac
      781 tccctccccc gtgggggagg gctggggaga gggcattctc cgaatttcgg caacctttcc
      841 taacactcta accgccaaga cacaagcctt gtggcttgtt gccctctctc taactctctc
      901 ccacgggaga gaggactggg cggttgttgg ggctaaggtt tctgtaaact aatcaggtta
      961 tgcaggctgt tttttgtttt tcagacggcc tttataaatg ctcaattcag tcggctttat
     1021 cctattattt tcaataatcc aatcaaaatc agccatctgc tatcgtgcag cttgcttttc
     1081 caattcttgc aacacgagca ggatttccgc cagtacatcg tttgtctgct gcaaaatttc
     1141 gtgattccaa aaacgcagca cggtaaagcc caggctgttg agatatgccg tccgcgcgtg
     1201 gtcgtatacg gcttgttccg cgtgctgccc tccgtctgct tcgacaatca acttgggcgt
     1261 tacgcacata aaatcaacaa tatagtttcc catcggctgc tggcggcgga atttatagcc
     1321 gttcagacga cctgcccgca ggtgctgcca caattttgct tccgccccgc tcatttcttg
     1381 gcgcatggct ttggcgcgtt ggcgcaagat ggggttgtcg gtggtcaaga gtttctcgtg
     1441 cgggttcatt ttgttgtcgt gctgtttgct gccctctctc taactctctc ccacggggag
     1501 agaggacggg gcggttgttg gggttaaagg ggctgtaagg aaaacaagtc gttcaggcca
     1561 ctttttactt ttcagacgac ctgcaatcaa cggttgtaaa tccaagttgc ttttcaaacc
     1621 gcctgtaacc gcaaaacttg ctgcaaccta ccccctcccc cgtgggggag ggctggggag
     1681 agggcattct ccgaatcgag gcaatctttc cctaattccc taactgcctc aatacaagcc
     1741 tttcggcttg ttgccctctc tctaacgctt tcccacggga gagaggacgg tgcggctgta
     1801 gtgattaagg gttttgcaag gaaaacaagg aaaacaagtt gtacaggctg ttttttattt
     1861 ttcaagcgac ctgaaatcaa cgcttgtaaa tccaagtcgc ttttcaaact gcctgcaacc
     1921 gcaaaatctg ctgcaaccta ccccctcccc cgtgggggag ggctggggag agggcatttt
     1981 ccaagttgcg gcaatctttc ccaaatccct tagtcttcta aaatacaagc cttacggttg
     2041 ttgccaaatg aaacttcttc catacccaaa acttgcgtgt aaaacgcgat ggttcggtca
     2101 atgtcggcaa cggtcagtac cagatggtcg agtgcgctaa tcttcatttc ccgctttctt
     2161 tttcaggcgg cggcagtgcc gtctgaaagc cattatgccc gttttgccgc tttcatattg
     2221 ccaatgaatt tgtcaaacaa atagccgaca tcttgcggac cggggctggc ttcggggtgg
     2281 ccttggaagc agaatacggg tttgtcggtc agctcgatgc cttgcaaagt gttgtcaaac
     2341 aaggatttgt gggtaatcct tgcgttggcg ggcagggtgt cggcatcgac ggcgaaaccg
     2401 tggttttggc tggtgatgac gactttgccg ctgtccaaat cttgcacggg gtggttcgcg
     2461 ccgtggtggc tgaagcgcat ttttaaggtt ttcgcgccga tagcgaggct gatgagctgg
     2521 tgtcccaagc agatgccgaa aatcggtttg ccgctttcca tcagtttttg cacggcttcg
     2581 atggcgtagg tgcaaggctc ggggtcgccg gggccgttgg acaggaacac gccgtcggga
     2641 ttgagtgcca acacgtcttg tgcgctcgtt tgggcgggga cgacggtcag gcggcagccg
     2701 cgcgaggcga gcatacgcag gatgttggtt ttcacgccga aatcgtaggc gacgacgtgg
     2761 taaggctgtt cgtcaggggt aacgaaactc ttgcccaatt cccattcgcc ttccgtccat
     2821 tcgtaagttt ccgtgcagga aacttctttt gccaagtctt tgccgaccat actgccgaac
     2881 gcggcgatga gttcttgcgc tttttcgatt gtggcatccg caccggtcag aatcgcgccg
     2941 ccttgcgcgc ctttttcgcg caacagcgtg gtcaggcggc gggtgtcgat gtcggcgatg
     3001 gcgacggttt ggttgcgtac caaatagtcg tgcaggcttt cggaggcgcg gaagttgctg
     3061 tgcaagagcg gcaggtcgcg gataatcagg ccggaggcat aaacgctgcg gctttcttca
     3121 tcttcggcgt tggtgccggt gttgccgatg tgggggtagg tgagggtaac gatttgtttg
     3181 cagtaggacg ggtcggtcag gatttcctga tagccggtca tcgaagtatt gaacacgact
     3241 tcgccggaag tcgaaccttc gtaaccgatt gatgtgccgt gaaatacgct gccgtcagcg
     3301 aggacgagga gggcgggggt gctcatgatg ggaatcctgt ttttaataaa attcttgaca
     3361 atgccgtctg aagggacttc ggcagggggc atccggtcgg aaaaatccgg tcaaaaaaaa
     3421 acacgccgcg caagatagac gcgtaacgtg cttttcgggc aagtgcctat accctgaaag
     3481 cagcatattt taagacgaaa catacccgat ttcaagcgca aacgcggcag gcgggctgat
     3541 atgttcgcgc gaaaacggaa atccgtggcg taaaaccgcc cgctctgcgc ccactatgcc
     3601 cgttacgcat ttccccacgt ccgtccggcg aaactatggg aatacccgaa tcgtcaggaa
     3661 tacctgaatc gtcaggaata cctgaatcgt caggaatacc cgaaccgtca ttcccgcgca
     3721 ggcgggaatc cagacctgtc ggcacagaaa cttatcgggt acaacggttt cttgagattt
     3781 tacgtcctag attcccgcct gcgcgggaat gacgcgtttc atttgccgcc ccctcccgaa
     3841 aaacgcaaaa aatgccgtcc gaaaaccttt cggacggcat tttcgcgtga accgtcattc
     3901 ccacgaaaac agaaaaccaa aatcagaaac ctaaaattcg tcattcccac gaaagtggga
     3961 atccaggact caggacctga gaaacctttt tacccgataa gttcccgtac cgaccgg
//
LOCUS       DAWEYF010000160         3988 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.160, whole genome shotgun sequence.
ACCESSION   DAWEYF010000160 DAWEYF010000000
VERSION     DAWEYF010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.160"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(94..990)
                     /gene="argB"
                     /locus_tag="WGN93_001774"
     CDS             complement(94..990)
                     /gene="argB"
                     /locus_tag="WGN93_001774"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ0227648.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1160..2290
                     /locus_tag="WGN93_001775"
     CDS             1160..2290
                     /locus_tag="WGN93_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ0227649.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTVEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2361..3212
                     /locus_tag="WGN93_001776"
     CDS             2361..3212
                     /locus_tag="WGN93_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ0227650.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3295..3957)
                     /locus_tag="WGN93_001777"
     CDS             complement(3295..3957)
                     /locus_tag="WGN93_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ0227651.1"
                     /translation="MDSRKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAADDEEFEELFYPIMALGGIYDEEENGAIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          868 a         1175 c          983 g          962 t
ORIGIN      
        1 tcaggaatga cggtttggaa attgcccgaa accccaaaaa cagaaaccgg acaaacgggt
       61 tttccgccaa agccggcatt ttccgacttt gcttcaggca tcttccccac cgcccaaaat
      121 catcgaaccg ataccggcat cggtaaagat ttccagcaaa agcgcgttgg gcaccctgcc
      181 gtcgatgatg tgcgtggctt tcacgccgtt gacggcggct tcgaccgcgg aagcgatttt
      241 cggcagcata ccgccataca gcgtgccgtc ggcaatcagt tcatcaatcc gtttcggcgt
      301 gagtttggtc agcagattgc ccgttttgtc catcacaccg gcgatattcg tcatcatcaa
      361 gagtttttca gcgttcaatt cttccgccaa tttgcctgct accaaatcgg cgttgatgtt
      421 gaacgcttcg cctttttcac ctacgccgac gggggcgacg acgggaatgc agccgcgttc
      481 tatcagccct ttaaccaaac cggtatcgat gctttccacc gtaccgacct gtccgatgtc
      541 cacgccattc tgttcgggcg tatcgatcaa aagtttcttc gccttaatga aatgatcgtc
      601 gcgtccgctt acgccgaccg cgtgcccgcc atatgtgtta atcatcgaca cgatttcttt
      661 attgacgtgc ccgcccaaca ccatttcgac aatatccatc gtctctttgt cggtcacgcg
      721 cattccttgg acaaactcgc cctttttgcc gactttttca agcatcgcat tgatctgcgg
      781 cccgccgccg tgaacgataa cgggatggat gccgaccagc ttcagcagca cgacatcgcg
      841 ggcaaaccct tctttcaagg caggttcggt catcgcgttg ccgccgtact tgatgacggc
      901 gaccgaaccg gaaaaccggc ggatgtaagg cagcgcttcg gcaaggatac gcgctttgtc
      961 ggcggcggaa ataatgtttt cagactccat aacgactccc tattgttgac aatttcggct
     1021 tatgttaacg ccaaacgccg tctgaaacaa tcttcagacg gcatctggca gaccttcggg
     1081 caggttgaag ccttgcgata cgggcggtaa aatcgcggtt tatccggttc gagaaaccgg
     1141 cgacagcaag gactttccca tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt
     1201 cgtcaaagac ctgaccgacc cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc
     1261 cgattttgca caatggttct acttccggct gcaaggcgcg gcatatcaaa actgcatcat
     1321 gcattttgaa aacgcggcag aagccgccta cccgaaaggc tgggaaggct atcaggcgtg
     1381 tgcctcatac gaccgccgca actggttccg cgtaccgact tcctacgaaa acggcgtact
     1441 gaccgtcaat catacgccgc tgtccaacag cgtgtattac gcctatttcg aaccttactc
     1501 cgaagaacag catttaaacc tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga
     1561 cgacttgggc agcaccgtgc aaggccgcga catcaatctg ctgaccatcg gcaatcaggt
     1621 cgaaagcgat ctgaaaatct ggattaccgc ccgccagcat ccgggcgaaa ccatggcgga
     1681 atggtttgtc gaggggctgc tcggcaggct gctcgaccct caggatgcaa ccgcgcgcac
     1741 cctgctcgat cgcgccacgt tctatatcgt ccccaacatg aaccccgacg gttcggcact
     1801 gggcaacctt cgtaccaacg ccgccggtgc gaacctcaac cgcgaatggg aaaatccgac
     1861 tgtggaaaaa agcccggaag tgttcttcgt gcgcgaaaaa atgctggaaa ccggcgtgga
     1921 tttgttcttg gacatccacg gcgacgaagg gctgcccttt atctttgttg caggaactga
     1981 aggcgtgcca aactacaatc cgcgcatttc cgcgttggaa acacagttca aaaccgccct
     2041 tttgaacgcc agccccgatt tccaagacga atacggttac gaaaaagatg cgcccggtca
     2101 ggcaaacatg accttggcaa caaactgggt cggcaaccgt ttcaactgcc ttgcctatac
     2161 gttggaaatg ccgttcaaag acaatgccaa cctgcccgac gacgatttcg gatggaacgg
     2221 tcaacggtcg ttgcgcttgg gcgaagccgc gttgtccgcc atcctcaaca tcatcggcga
     2281 tttgcgctga aacccttatt gcagaaatgc cgtctgaagc atcatgcctt tcagacggca
     2341 tttgaaaacg aaagcccgtt atgattaccc atccccaatt cgaccccgtc cttatcagta
     2401 tcggcccgct tgccgtccgc tggtatgccc taagctacat cctcggattt attcttttta
     2461 cctttctcgg cagaaggcgc atcgcgcaag gcttgtccgt ttttaccaaa gaatcgctcg
     2521 acgacttcct gacatggggc attttgggcg taattttggg cgggcgtttg ggttacgtcc
     2581 tgttttacaa gttttccgac tacctcgccc atccgcttga tattttcaag gtatgggaag
     2641 gcggaatgtc gttccacggc ggctttttgg gtgtagttat tgccatatgg ttgttcggcc
     2701 gcaaacacgg catcggcttc ctcaaactga tggacacggt cgcaccgctc gttccgctgg
     2761 gtctcgcttc gggacgtatc ggcaacttca tcaacggcga actttgggga cgcgttaccg
     2821 acatcaacgc attttgggca atgggcttcc cgcaggcgcg ttacgaagat gccgaagccg
     2881 ccgcgcacaa tccgctttgg gcagaatggc tgcaacaata cggtatgctg ccgcgtcatc
     2941 cctcgcagct ttatcagttt gcacttgaag gcatctgcct gttcgccgtc gtttggctgt
     3001 tctctaaaaa acagcggccg accggacaag tcgcctcgct cttcctcggc ggctacggca
     3061 tattccgctt cattgccgaa ttcgcacgcc aacccgacga ctatctcggg ctgctgacct
     3121 tggggctgtc gatggggcaa tggttgagcg tcccgatgat tgttttgggt atcgtcggct
     3181 ttgtccggtt cggcatgaaa aaacagcact gaccgcctgt gaaaaatacc gtctgaaaca
     3241 tggaaatccg gtttcagacg gcatttttac gtttggttca tggaaacaaa cgcttcaatt
     3301 cttaccgcaa cacgccttgt attttctgcc gctgccgcac ggacagggat cgttcctgcc
     3361 tgttttttcg ccttccctgc ggacggtttg cggtttgttg atgactgcct gccagtagcg
     3421 gtagatatcc gccaatgcat aaggcaactc ggattccagt tccgccagct cgccttctgt
     3481 gaattgcaga cggatagcgc cgttttcctc ttcgtcgtaa ataccgccca atgccatgat
     3541 gggataaaac aactcttcaa attcttcatc atcggcggct tcaaaccaat cggtcggcac
     3601 aatatccaag ccgtaaagat aagcattgca ccatgtgtaa aaatcgctgc cgccgtcttc
     3661 gttttcatac agccacaaat cgggcagttt tttatccgac atcgcggcgg ttgtttccat
     3721 cgccattgcc aaaaccagcc gttcgatttc ggaacgttcg gcggcggtaa attgcgattc
     3781 gtcgcccaac acttcgggca gccagtcgag cggtgtcaat ttgtccggcc cgctcaacag
     3841 cgccgtcata aaaccttgaa cctcgtcgca acgcatcgtg ttgccttgtt cgcttttggc
     3901 atccaacaat tcgctcaacc gccgtttgga tgcttcggta aattttcggg aatccatcat
     3961 tttccttttc aaatgggttt tgcgccct
//
LOCUS       DAWEYF010000161         3984 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.161, whole genome shotgun sequence.
ACCESSION   DAWEYF010000161 DAWEYF010000000
VERSION     DAWEYF010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3984
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.161"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            272..1789
                     /locus_tag="WGN93_001778"
     CDS             272..1789
                     /locus_tag="WGN93_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ0227652.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALSQVWRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRKLHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPVPVLENVGRFRKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQDGGS
                     QICSVSRAERATGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLSPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGIAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1848..3629)
                     /locus_tag="WGN93_001779"
     CDS             complement(1848..3629)
                     /locus_tag="WGN93_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ0227653.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHSVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNIASDGIVATEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIRAQALPDTSF
                     ADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGSIGYLNPCSGGLGFEGAFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENRQCALLDRHLCRLKAAAQALNLPLPDGCENQIKQYIARLPDGVFRVKALLASDG
                     ISLSRAVLNHLADKQRVIISPTILPAQNYLRHFKTTHRALFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLHTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          844 a          888 c         1294 g          958 t
ORIGIN      
        1 ctcgccttag ctcaaagaga acaattctct aaggtgttga agcaccaagt gaatcggttt
       61 cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccgctat
      121 aaatgtgaaa tccgcccttt gaaaatcggg cggcggtttt ttgcctgccc gctttcagac
      181 ggcaaagccg gttttcacgg ttttctgcct gtttttcgga tggtttgacg tgtttcggcg
      241 gcgtgtttgc cggaaaggta aatgacagga tatgttgtat ttcagatacg gttttttggt
      301 tgtttggtgt gcggcaggtg tttctgccgc ctatggggcg gatgcgcctg caattttgga
      361 tgacaaggct ttgtcgcagg tgtggcggtc ggtgtcggat aaatgggcgg aatcggattg
      421 gaaagttgaa aatgatgccc cgcgcgtggt tgacggggat tttttgttgg cgcacccgaa
      481 aatgttggaa catagtttgc gcgacgcgct caacggcaat caggcggatt taatcgcttc
      541 gttggcggat ttgtatgcca agctgccgga ttatgatgca gttttgtacg gcagggcgcg
      601 ggctttgctg gcgaaattgg cgggaaggcc ggcggaggcg gtggcgcggt atcggaagct
      661 gcacggggaa aatgcggcag acgagcggat tttgctggat ttggcggcgg cggagtttga
      721 cgatttccgg ctgaagtcgg cagaaagaca ttttgcggag gcggcaaaat tggatttgcc
      781 ggtgccggtt ttggaaaatg tggggcgttt tcggaaaaaa acggaggggc tgacgggctg
      841 gcgtttttcg ggcggcatca gtccggcggt caatagaaat gccaataatg ccgcgccgca
      901 atattgccgg caagacggag gcagtcagat atgcagtgtc agccgggcgg agcgggcgac
      961 aggcttgaat tatgaaatcg aggcggaaaa gctgacggcg ttggcggaca atcattattt
     1021 gttgttccgt tccaatatcg gcggcacaag ctattatttc agtaaaaaat cggcttatga
     1081 cgacgggttc ggcagggcgt atttgggatg gcagtataaa aatgcgcggc agacggcggg
     1141 gattttgccg ttttatcagg tgcagttgtc gggcagcgac ggctttgatg cgaaaacaaa
     1201 acgggtaaac aaccgccgcc tgtcgccgta tatgctggcg cacggagtcg gcgtgcagct
     1261 gtcccatact taccgcccaa acccgggatg gcaattttcg gtcgcgctgg aacattaccg
     1321 ccaacgctac cgcgaacagg atagggcgga atacaataac ggcaggcagg acgggtttta
     1381 tgtttcgtcg gcaaaacgtt tgggcgaatc ggcaactgtg ttcggcggct ggcagtttgt
     1441 gcggtttgtg ccgaaacgtg aaacggtggg cggcgcggtc aataatgccg cctaccggcg
     1501 caacggtgtt tatgccggct gggcgcagga gtggcggcag ttgggcggtt tgaacagtcg
     1561 ggtttccgcg tcttatgccc gccgcaacta taagggcatt gcggctttct cgacagaggc
     1621 gcaacgcaac cgcgaatgga atgtctcgct ggctttgagc cacgacaagt tgtcgtacaa
     1681 aggtatcgtg ccggcgttga attatcgttt tggtaggacg gaaagtaatg tgccgtatgc
     1741 gaaacgccgc aacagcgagg tgtttgtgtc ggcggattgg cggttttgaa tggtgggata
     1801 atgccgtccg aactttggaa acaggttcgg acggcatttt tgcgcgttca ggcaagggcg
     1861 gcggcaaata cgccgcgcaa ggcgttggag agacggattt cttcggcttc ttgcagtgtt
     1921 ttttgtgtga tgtgtgtttc gatcacttga tttgtgtgca aatatttttg cggttcgtcc
     1981 aatacggctt ggcgcattat gccgtttaaa atgtctaaat ctaaagaggg tgtgagccat
     2041 tgtccgcgat gtttgacgaa gacgttgctt ctgccgcctt cgagcaggat gccgtctgaa
     2101 ttgaaaaaca ggctgtcgaa cgcgccttgt gtttcggcgg tttgccacgc ttggtcgaag
     2161 agggcgcggt gagtggtttt gaagtggcgc aggtagtttt gtgcgggcag gatggtcggc
     2221 gaaatgatga cgcgctgttt gtcagccaaa tggtttaaaa cggcgcggga caggctgatg
     2281 ccgtctgaag cgagcagggc tttgacgcgg aacacgccgt cgggcaagcg ggcgatgtat
     2341 tgtttgattt gattttcgca accgtcgggc aggggcaggt tgagggcttg ggcggcggct
     2401 ttcagacggc ataggtggcg gtcgagcagg gcgcattgcc tgttttccac gcgcagggtt
     2461 tcaaaaatgc cgaaatcggg gcgcaattcg ttgaggaaac gggctttcca gccgcattcg
     2521 cgatattcgg cggcggggtc gctgtcgatg acgatgccgg aaccgacacc gtacacgcct
     2581 tgataaatgc cgtctgaaag cggcgtgagc gataaggtgc ggataacgac gttgaacgcg
     2641 ccttcaaacc ccaagccgcc ggaacacggg ttcaaatagc cgatgctgcc cgtataaagt
     2701 ccgcgtgctt cggtttcgag tgtttcgata atctgcatac tcattttttt gggcgcgccg
     2761 gtgatactgc cgcagggaaa ggcggcgcgg aggatgtcgg cgaacgaggt gtccggcagg
     2821 gcttgcgccc ggatggtgct ggtcatctgc cagacgctgc cgaaacgcga tactttaaac
     2881 ggttcgggta cgcatactgt gccggtttgg gcgattttgc cgagatcgtt acgcagcaaa
     2941 tcgacaatca tcacgttttc ggcgcggttt ttcgggtctg cttgcaactc ggcggcgcgg
     3001 cgttcgtctt gtccgtcgcc caaaatcggc gcggtgcctt tcatcggttc ggtggcgacg
     3061 atgccgtctg aagcgatgtt gaggaagagt tcgggcgaga aacacagtgt ccacgcggat
     3121 tgcccctccg catcgggcag gtgggacaaa acggcatagg ggacgggctg gcgcaggcgg
     3181 cggtagaggc tgacgggatt gccgtaggct tgcaggtgca ggcgggtagt gtagttgatt
     3241 tgataggtgt cgccgcgccg gatggcttcg tggatttggc ggatatggtc gaggtaatcg
     3301 gcttcggata cggaggattg cggcgtggaa atgccggcgg ggaggccgtc tgaatgtcgg
     3361 gcaagccagc ttgcggcatc ggtgtcggcg cagtcggcaa accagtgcag ggcaagattg
     3421 ccgccgcgtt cggactcaac ccccgtcagc ggcagaccga atccgtagtc tgcaaacaac
     3481 accgaatgca gccctttttg ccagcccgat tgcagcgcgc cgtccaaagc atcgagttct
     3541 tcgggacgga aaaaacggct ttctacatga ttttgatagc gttttgcgcg accgcttacg
     3601 gcatcgtcaa acagggcgaa atagggcatg gcaattcggg gcaaatgttt tgattatacg
     3661 ctctttttac acatattttc agacgattcg gcaaatatcg gcaaaatgta attttatgta
     3721 gagaaagtgg ggggcgaggg tgtaaaattg tgaaaacaaa ttccgatttc caacctgaaa
     3781 tacaataagg agacctttat gacagaccac cagctgcaac cgtttgaaaa cgtagaatta
     3841 ggcgaaaagc aagaccagct ccaagtatag tggattaaca aaaaccagta cagcgttgcc
     3901 tcgctttagc tcaaagagaa cgattctctc aggtgctgaa gcaccaagtg aatcggttcc
     3961 gtactatttg tactgtctgc ggct
//
LOCUS       DAWEYF010000162         3930 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.162, whole genome shotgun sequence.
ACCESSION   DAWEYF010000162 DAWEYF010000000
VERSION     DAWEYF010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.162"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..331)
                     /locus_tag="WGN93_001780"
     CDS             complement(<1..331)
                     /locus_tag="WGN93_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ0227654.1"
                     /translation="MFSLYREDSLISRLNRDGYLTSPSADFLELLSLCRDIHALTDGA
                     FDPTVQALWKLYADYFAARPDAETPPPQNSVKEALKRVGFGKVSFDDREIRFAEKGMG
                     LSLNGIAQ"
     gene            complement(312..593)
                     /locus_tag="WGN93_001781"
     CDS             complement(312..593)
                     /locus_tag="WGN93_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nosX protein required for nitrous oxide
                     reduction"
                     /protein_id="HEZ0227655.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKIVQPLP"
     gene            complement(602..1396)
                     /locus_tag="WGN93_001782"
     CDS             complement(602..1396)
                     /locus_tag="WGN93_001782"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ0227656.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1780..3114
                     /gene="gdhA"
                     /locus_tag="WGN93_001783"
     CDS             1780..3114
                     /gene="gdhA"
                     /locus_tag="WGN93_001783"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ0227657.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3256..3630
                     /locus_tag="WGN93_001784"
     CDS             3256..3630
                     /locus_tag="WGN93_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227658.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3674..>3930
                     /locus_tag="WGN93_001785"
     CDS             3674..>3930
                     /locus_tag="WGN93_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ0227659.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
BASE COUNT         1069 a         1015 c          926 g          920 t
ORIGIN      
        1 cttgcgcgat gccgttcaag gacaaaccca tacccttttc ggcaaaacgg atttcacggt
       61 cgtcaaacga gactttgccg aagccgaccc gtttcagggc ttccttcacg ctgttttgag
      121 gaggcggcgt ttccgcatcg ggacgggcgg caaaataatc ggcatacagt ttccacaacg
      181 cctgcactgt cggatcgaac gcgccgtccg tcagcgcgtg aatatcgcgg cacaggctca
      241 acagttccaa aaaatccgcc gacggcgaag tcagataacc gtccctgttc aggcggctga
      301 tcaggctgtc ttcacggtaa aggctgaaca attttttcca aacgcgccac ttccgccaaa
      361 accttgttga ccaaatccgc cgcctgtctg tcgtccacac cgaacaggcg cagctccgca
      421 ccggaaccca gcgcgacacc tttccagaag aacacatttt cattgcgttt ttcatcttta
      481 ttgcgttttt catcatcggc ggcaaaagga ttcggcagga aagaaaccgc cgcgcccgcc
      541 gccgcaacgg cggcaactgt caaaaaacgc ctgcgcccga aatgcctgcc cataccgcct
      601 cctaaaccga cactgccgcc ttgatgtgcg gatgggggtc gtaaccttcc aactcgaaat
      661 cttcaaactt gaaggaaaac aaatctttga cttcaggatt gattttcatc actggcaagg
      721 cgcgcggttc gcgttccaac tgcaatgcgg cctgctcgaa atggttgcgg tacaaatgcg
      781 cgtcgccaaa cgtatggaca aactcgcccg cctccaatcc gcacacttgc gccatcatca
      841 tggtcaacaa tgcgtagctg gcaatattaa acggcacacc aaggaaaata tctgcactac
      901 gctggtaaag ctggcaggac agtttgccgt cggcaacgta aaactgaaac agcgcgtggc
      961 agggcggcaa ggccatttcg tcgaccaaag ccggattcca cgccgataca atcaggcggc
     1021 gcgagtcggg gtttttctta atttgttcca ccacattggc gatttggtcg atatgcctgc
     1081 cgtcgggcgc gggccagtta cgccactggt agccgtaaac cgggcccaag tcgccgtttt
     1141 cgtccgccca ctcgtcccaa atggaaacat tgttgtcctt taggtatttg atattggtat
     1201 cgcctttgag aaaccaaagc agctcgtgga taatcgaacg cagatgcagc tttttggtcg
     1261 tcagcagcgg aaaacctttg cccaagtcaa aacgcatctg ataaccgaat acggagcgcg
     1321 tgcccgtacc ggtgcggtct gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt
     1381 ccaaataggc tttcatagca gtctttcatc aaattaaacg gcgcatattg taacatttcc
     1441 ggataatgcc caaaacacgg atacagacag gcaggattgt tggcaatttc agtccttttc
     1501 cacagtaaaa cccggtggga aaacaaaatt accttgattg gaatcaaaaa atctagttta
     1561 attacttaga ataaaatttc aataatattt ttatttacga aattaattta tgattattga
     1621 ttaattatcg gcaacaaaca tcaaacatcg aaaacatgga aaaaataatg tcaacaattt
     1681 ttgccaaatc gggcttggca tcagaaaaaa ataggtttat attcccacct acaaatttgt
     1741 tttcccatta gtacactatc aaccaaaagg agtatccgaa tgactgacct gaacaccctg
     1801 tttgccaacc tcaaacaacg caatcccaat caggagccgt tccatcaggc ggttgaagaa
     1861 gtcttcatga gtctcgatcc gtttttggca aaaaatccga aatacaccca gcaaagcctg
     1921 ctggaacgca tcgtcgaacc cgaacgcgtc gtcatgttcc gcgtaacctg gcaggacgat
     1981 aaagggcaag tccaagtcaa ccggggctac cgcgtgcaaa tgagttccgc catcggtcct
     2041 tacaaaggcg gcctgcgctt ccatccgacc gtcgatttgg gcgtattgaa attcctcgct
     2101 tttgaacaag tgttcaaaaa cgccttgacc accctgccta tgggcggcgg caaaggcggt
     2161 tccgacttcg accccaaagg caaatccgat gccgaagtaa tgcgcttctg ccaagccttt
     2221 atgaccgaac tctaccgcca catcggcgcg gacaccgacg ttccggccgg cgacatcggc
     2281 gtaggcggac gcgaaatcgg ctatctgttc ggacaataca aaaaaatccg caacgagttt
     2341 tcttccgtcc tgaccggcaa aggtttggaa tggggcggca gcctcatccg tcccgaagcg
     2401 accggctacg gctgcgtcta tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt
     2461 gaaggcaaac gcgtcctgat ttccggttcc ggcaacgtgg cgcaatacgc cgccgaaaaa
     2521 gccatccaac tgggcgcgaa agtgctgacc gtttccgact ccaacggctt cgtcctcttc
     2581 cccgacagcg gtatgaccga agcgcaactc gccgccttga tcgaattgaa agaagtccgc
     2641 cgcgaacgcg ttgccaccta cgccaaagag caaggtctgc aatactttga aaaccaaaaa
     2701 ccgtggggcg tcgccgccga aatcgccctg ccctgcgcga cccagaacga attggacgaa
     2761 gaagccgcca aaaccctgtt ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg
     2821 ccgtcgactt tgggcgcggt cgagcaattt atcaaagccg gcatcctcta cgccccggga
     2881 aaagcctcca atgccggcgg cgtagcaact tcaggtttgg aaatgagcca aaacgccatc
     2941 cgcctgtctt ggactcgtga agaagtcgac caacgcctgt tcggcatcat gcaaagcatc
     3001 cacgaatcct gtctgaaata cggcaaagtc ggcgacacag taaactacgt caatggtgcg
     3061 aacattgccg gtttcgtcaa agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac
     3121 gccgccgctc cgcaaacaaa atgccgtccg aaccgcaaat gctgttcaga cggcatttca
     3181 ttatccgccc gttcgaatcg ggtgatacta tttgtatcca gaattgttgg atagtttggg
     3241 agtggagagg aagaaatgat tatggaccaa tactatatgg agttaaagaa taagttatct
     3301 aacagaccaa tcctactgga taatactaat gattttcttt ttgttttagt aaatacagtg
     3361 aaagctatga tagaaaatac tgataaaagt cagctttcag agttagataa aattttagac
     3421 ggtgtcacaa gtcaagaatt gaaacttgcc tatgattttt gtcaagggaa attcggtcaa
     3481 gcaggttttt cttatcgtag gcacccgaat tatttttatt tgtccagttt aattgcgact
     3541 tttccagaat ttgagttgtc taaagcagac cgagattacc tcaaaggaat cataaatttt
     3601 gataactacc ttttatatga gttagattag tctttaatca cctcaaaacc ctatttattc
     3661 aaaaggagaa aaaatgattg agctgaaatt agtagatgag agcagttttc aggcagtgct
     3721 ggatttgaaa atatctgaag ctgatgaacg agcacgtttt gtggctccaa atgtacgctc
     3781 tttagctgac gcatggctct accgggaaaa tgaagatgtg tttccgaggg caatctattg
     3841 ggataagcaa gtggttggct ttctcctgct ggaaatagac aaggatgaag cagaatactt
     3901 tatctggcgg ataatgattg gtcagcagtg
//
LOCUS       DAWEYF010000163         3893 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.163, whole genome shotgun sequence.
ACCESSION   DAWEYF010000163 DAWEYF010000000
VERSION     DAWEYF010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3893
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.163"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            150..653
                     /locus_tag="WGN93_001786"
     CDS             150..653
                     /locus_tag="WGN93_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ0227660.1"
                     /translation="MSDEFNRFIERVLSHEGGYVNHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            762..1094
                     /locus_tag="WGN93_001787"
     CDS             762..1094
                     /locus_tag="WGN93_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227661.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAVVPQLAEVKKS
                     ANQEGGRQ"
     gene            1091..1501
                     /locus_tag="WGN93_001788"
     CDS             1091..1501
                     /locus_tag="WGN93_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ0227662.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLKAEMVALKKPDALIHGKEVRQKERNSSQG"
     gene            1506..2255
                     /locus_tag="WGN93_001789"
     CDS             1506..2255
                     /locus_tag="WGN93_001789"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ0227663.1"
                     /translation="MPSVELLLEIVGLPRGTFYYQLAVQSAEDKYADLKRHIHDIYRR
                     HKGRYGYRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWF
                     KFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(2574..2936)
                     /gene="ssrA"
                     /locus_tag="WGN93_001790"
     tmRNA           complement(2574..2936)
                     /gene="ssrA"
                     /locus_tag="WGN93_001790"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(2999..3604)
                     /locus_tag="WGN93_001791"
     CDS             complement(2999..3604)
                     /locus_tag="WGN93_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ0227664.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT          986 a          906 c         1020 g          981 t
ORIGIN      
        1 attaaaagcc gaaaagaaga gtttaaaaaa ttaatggaaa agaagaaacc caaaatctag
       61 aacgagtttt aacccccttt aaaatcccat tcagacgacc ttttctaaaa tccctgtatt
      121 gatttttaat tcaatacagg gatttttcca tgtcagacga attcaaccga tttatcgaac
      181 gcgtcctctc ccacgagggc ggttacgtca atcatcccaa agaccccggc ggcgaaacca
      241 attggggcat cactaagcgc accgcacagg caaacggcta caacggctcc atgcgcgcca
      301 tgacgcgtga acaggcaatc ggcatttacc gtaaagcgtt ttgggagcgt taccgcgccg
      361 accaaatgcc cgaagcggtc gcttttcaat tttttgatgc ctgcgtcaac cacggttacg
      421 gcaatgccgc ccgtatgctc caacgcgccg caggcgtgcc ggacgatgga atcatcggcg
      481 aaatcagcct caaagccatc aattcccttc ccgaaaacga ccttttattg cggttcaacg
      541 ccgagcgtct ggtcttttat accaagctgg gtacgttcac ctctttcggc aagggctggg
      601 tacgccgtgt ggcgcaaaac ctgattcacg ccgccgcaga caatgccgat tgaggagcaa
      661 accatgtcaa aaaagtccat tctcgccctg atggccgcag ccatgcagcc cgatttcagc
      721 cacagcgacc taggcattcg ctacgccatg ccgactcagg gatgttggac gcaagcccac
      781 cgcaagagcg gggtagccgc cgcgaaacgc gcagccaaaa aaaagcgtca caaataaccg
      841 cctttttccg atggctgggc ggcttggtct ctaatccggc cacagggaaa atcagccata
      901 ccaaactttg ggcaaacgtc gccgcagccg ccatgacttg gaagttcgtg caggcggcgg
      961 acgcgcccga atggctttgg tgggcatacg gcgcgatggt cggcgggtat gcattaatca
     1021 aacgcggcat cgccgtcgta ccgcagttgg cggaagtcaa aaaatccgca aatcaggaag
     1081 gggggcggca atgattgaat ttgtccgagc caaaaaacgg ctgctttggg catttgtgct
     1141 tttgcttgtg tggacgtgcg gttaccgata cgccgccgac aaggccgaag cggaacaaac
     1201 cgccctgatt gccacctatc ggcattcttc tatggttgcg gcggaacaat atgccttgca
     1261 gcttaaaaaa gcgcaggacg aaaggcagcg gtggtacgac ttttcccaaa aacaaggaag
     1321 aaagcccgtg aaaaaacagt atccgccgca aacgaaaaaa gccggctatc tgaaaaccaa
     1381 ggaagaactg cttgcggaat tggcttgcct taaagcggaa atggttgccc taaaaaagcc
     1441 cgatgcctta atccatggga aagaagtgcg gcagaaagaa cgcaactcgt cgcagggtta
     1501 aggcaatgcc atccgttgaa ctgctgttgg agattgtcgg actgccacgc ggcaccttct
     1561 attaccaatt ggccgtccaa tcggcagaag acaaatatgc cgatttgaaa cggcatatcc
     1621 atgatattta tcgacgacat aagggaagat acggctaccg gaggattgcg gcagccatcc
     1681 gtcacgcagg aacaccggtc aatcacaaga aagtcagccg tctgatggcg aagacggggc
     1741 tgaaggcagt gatacggcgg cgcaaatacc gctcgttcaa aggagaagtc ggcaaaattg
     1801 cgccgaatat cctgcgacgc tgtttccatg cagaaaagcc gaatgagaaa tgggtaacgg
     1861 acgttaccga gttcaatgta ggcggagaaa agatatacct ttctccgatt atggatttgt
     1921 ttaacgggga aatcgtcagt taccgtattc aaatccgccc gactttcgat ttggccggcg
     1981 agatactgaa aggtgcgccg gagaaaccgg gatcgtctga aaagccgata ctgcattcgg
     2041 atcaaggttg gcaatatcag atgttttttt atagtggatt aaatttaaat caggacaagg
     2101 cgatgaagcc gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggttta
     2161 aatttaatcc actatacaac aacgatagaa tcaagttgaa attaaaaggg ctgagccttg
     2221 ttcagtacag aattcagtcc ctgaaagccg cttgattaaa ctgtccgact ttttggggtc
     2281 agttcggctt cggcattttt ttatccgttt gggggtaact tgtttggaaa gctgcaagct
     2341 tataaataaa ggattacatt taagttttgg gtaacctttt taaaaaaatg cgtgatgact
     2401 tttgcatttt taaggcgttt tttggggtaa ttcgtgaaaa gttaccccaa aagttacccc
     2461 ataaatggcg aaaactcaag catacgccag catattcaag gcaacaaaaa agccttgaaa
     2521 ctgttgaagt tcaaggcttt tttgtgttgc aggatgctgc tgaaaatagg gtatggtgga
     2581 ggcgggggga atcgaacccc cgtccgaaag tcctctacaa agcgttctac atacttagtt
     2641 gtgtctattt gaaaatctta tttccatcat gccgaccaac aggccttttg gaaaccagtt
     2701 accttaaatc tcatttcctg ccaagtaacc cggcaggaaa ccagtcaatg taagatgacg
     2761 ttgcggtggc tttcgccaca cagcccattg accgactgct gcaacggcta gccttaagcg
     2821 gctaaagcgt aagtttcgtc gtttgcgact atttgaattc agtgttttac gggaatctga
     2881 gaccccggta tgcccgcatc tgcttcgcaa cccccgtcga aaccaaggtc gcccccagaa
     2941 atggtttgca aattatacgg atattgtgcg gtgctgccaa gtctgtcgga gaaatttgtc
     3001 agtcttgctg ccttaatttg cgtttgagca ggatgcggac gcagccgtcg ttgccttccc
     3061 ggggttcggc gtaggcgagt acatcggggt gttgcatcag ccagtttcgg gtcatatttt
     3121 tcagaacggg tttgtagcct ttggaaccta atccgctgcc gtggatgatt tcgccgcata
     3181 cgccgcgttt ttgggtgaat gcgatgaatt cgttgaggac tttttgggct tcttcctgtg
     3241 tgtagccgtg caggtcgaca tcggtaacga cgggatagta tccgtttttc aggcgttgga
     3301 tgtcgttttt tccctgtccg tttttgctga agctggcggg cgggtcgttg tatgtgctgc
     3361 cgatgtagaa gtagttttct tcgtcggcgc ggttgtcttt gggacggact ttgatggggg
     3421 ttttgtcggg cggcgcataa tattgctgcc ggttttttaa tggggagact tgtccgactg
     3481 cttgtgaaaa atcgaaatcc tgttcttgtt tttgcttgtt tttttcggct gcctgttttt
     3541 ctgccgcttc tttttgggct tgtttgccca gttgtttgag gatgttttgg aagtcggtat
     3601 tcatattttt tcctgttatt tgtccgatgg ctgtttcggg cggggtttta atttgccgga
     3661 atgtttgcca atcgggggag gatgattttg ttgcctgcgt atgttttttg aaagtgtgat
     3721 tgtatatcaa aaagaaatgc ggcaaccgtc ggcagtgttg attgccggaa atgcggaccg
     3781 gtcgaaccga tatgcccgaa cgcctgataa agttttaaaa acctgccttg cgaagcaggc
     3841 tgacgtgttt tgccaatctt gaattgccgg aaacgcgaaa cacggaaatc tga
//
LOCUS       DAWEYF010000164         3886 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.164, whole genome shotgun sequence.
ACCESSION   DAWEYF010000164 DAWEYF010000000
VERSION     DAWEYF010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.164"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..2118
                     /locus_tag="WGN93_001792"
     CDS             <1..2118
                     /locus_tag="WGN93_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ0227665.1"
                     /translation="GKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGG
                     ESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTAGVQVGSAQLIKGASTAVNGMDPE
                     GAVSGSVNIETKKAADEGNRKIGLGRFSNNRAQGTFDLGQRFGENKEFGVRANGKLRH
                     GDTPRHGYSEDNKEFALNADYRGETLRVAFDSIYAKRKTNGGRARIQDIQNAGGRLFG
                     APDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVCL
                     NATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLTARGEFETGPVTHN
                     WSMAFDRVIRQRKTINGSGNGNSKIEVKANENIANQLASFTADYPNSWENSANLDANI
                     KVNSLALSDTLGFVDNKYRLTLGERFQTVEYTDKKSQSGDAKRFSPMLMAAWVPQPDL
                     VVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGNFVTTLNAFQIKRPG
                     YWRGHTTTKTTKGVTTTLTYGNNSDFARYKAQGGAAGDEQGMERNRGIEFNTYANLLN
                     NTLRPTLGLMYLQSTVKEYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLNGN
                     VSYFGKSYQDTQKQYAFPSYTLIDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRG
                     QYDRSFAVVGLPRTYWLKAELDF"
     gene            2242..3792
                     /locus_tag="WGN93_001793"
     CDS             2242..3792
                     /locus_tag="WGN93_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ0227666.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQEAGFL
                     TVESHQYERGWFTSTETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAYIETEFKYAPETEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGQFRFGTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFK
                     DLKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         1081 a          968 c          987 g          850 t
ORIGIN      
        1 ggcaaagcca acgcctttac cgcaccgatt accgtcgtca attacgacga acaagccctc
       61 aataacaccg aagcgcgtac tttggtggat gccgtagcga aaaaagacgc ttccgtttgg
      121 cagttcggcg gcgaaagcaa cacgctgacc ggcctgtatt tccgcggtta tcagcttgat
      181 gcgcgccaat tcagcgtcaa cggcttggcc ggtatgtacg gcacgcaagg caccgccggc
      241 gtgcaagtcg gctccgcgca actgattaaa ggcgcgtcca ccgccgtaaa cggtatggac
      301 cccgaaggcg cggtctccgg ttccgtcaat atcgaaacca aaaaagccgc cgatgaaggc
      361 aaccgcaaaa tcggtttggg ccggtttagc aacaaccgcg cccaaggtac gttcgacttg
      421 ggtcaacgct tcggcgaaaa caaagaattc ggcgtgcgcg ccaacggcaa actgcgccac
      481 ggcgacactc cgcgccacgg ttacagcgag gacaacaaag aatttgcctt gaatgccgac
      541 tatcgcggcg aaacactgcg cgtggcgttc gactccatct acgcgaaacg caaaaccaac
      601 ggcggccgtg cgcgtattca ggatattcaa aacgccggcg gacgcttgtt tggcgcgccc
      661 gatggtaaaa ccaacctgct gccttcttgg aactggcaaa ataccgccgg ccaaaccaat
      721 atgcttacgt ttgaatggga tgcgtttgat aatgcacaga ttacaggcgg tatcggctac
      781 aacaaggcac gctattacgg cacgctgatt tccccgaccg tatgtttgaa tgctaccagc
      841 acttgtaccg atatgcaaaa cacaaacgcc agcggcaaag taacggcacg caactatgac
      901 tacaataccg gtactgcgcg cctgaccgac caatatttcc gcacattgag tatgaacctg
      961 accgcacgcg gcgaatttga aaccggcccg gtaacacata actggagtat ggctttcgac
     1021 cgcgttatcc gccagcggaa aaccataaac ggcagcggga acggcaacag caagatagaa
     1081 gtgaaggcaa acgaaaatat tgcgaatcaa ttggcatcgt ttacagccga ctatcccaat
     1141 tcttgggaga actctgccaa cttggatgcc aatatcaaag tcaacagcct ggctttgtcc
     1201 gacaccttgg gcttcgtgga taacaaatac cgcctgactt tgggcgaacg tttccaaaca
     1261 gtcgaatata ccgacaaaaa atcacagagc ggcgatgcca aacgtttcag cccgatgctg
     1321 atggcggcgt gggtgccgca acctgatttg gttgtgtacg gcaactatat ggaagacttg
     1381 gagcctgccg acatcaaaac cgatgattcc ggcgaaacga caatggcgaa accgcgtgtc
     1441 agccgccagt ttgaagtggg cgtgcgtaaa aactggggca atttcgtaac cacgttaaac
     1501 gcgttccaaa tcaaacgccc gggctactgg cgcggtcata caactaccaa gacaacaaaa
     1561 ggggtaacaa caacgctgac ctatggcaac aattccgatt tcgcccgcta taaggcgcaa
     1621 ggcggcgcgg ccggcgacga gcaaggtatg gaacgcaatc gcggtattga gttcaacacc
     1681 tacgcgaact tgctcaacaa tactttgcgt ccgactttgg gtctgatgta tctgcaatcg
     1741 accgtgaaag agtatccaaa ttcacgcgat atgctggtta acggcgtaca agtcgccaat
     1801 ccgcgcgtaa ttgccaaagc aggtttggaa tgggatacac cgtttgccaa aggattgact
     1861 ttaaacggta atgtttcgta tttcggcaag tcttaccaag acacgcaaaa acaatacgcc
     1921 ttcccgtcct acaccttgat tgacgtaggc gcgcgctaca aaaccaagct cggcaaaaat
     1981 actttgaccg tcagcagctc ggtggaaaat ctgttcaaca aaaactactg gcaggtacag
     2041 cgcggccaat acgaccgcag cttcgccgtt gtcggtctgc cgcgtactta ctggctgaag
     2101 gcggaattgg atttctgatt tctccgcatc tggaaaatgc cgtccgaaca ggtttcagac
     2161 ggcatttctt ttaaagagat atggcgggat acgcttaaat aatgctattc tagcgtcttt
     2221 gaaacctgct tgtttgaagt gatgaaaaaa cctttgattt cggttgcggc agcattgctc
     2281 ggcgttgctt tgggcacgcc ttattatttg ggtgtcaaag ccgaagaaag cttgacgcag
     2341 cagcaaaaaa tattgcagga agcgggcttc ttgaccgtcg aatcgcacca atatgagcgc
     2401 ggctggttta cctctacgga aacgacggtc atccgcttga aaccggagtt gctgaataat
     2461 gcccggaaat acctgccgga caacctgaaa acagtgttgg aacagccggt tacgctggta
     2521 aaccatatca cgcacggccc tttcgccggc ggattcggca cgcaggcgta cattgaaacc
     2581 gagttcaaat acgcgcctga aacggaaaaa gttctggaac gcttttttgg aaaacaagtc
     2641 ccggtttccc ttgccaatac cgtttatttt aacggcagcg gtaaaatgga agtcagtgtt
     2701 cccgccttcg attatgaaga gctgtcgggc atcaggctgc actgggaagg attgacggga
     2761 aaaacggttt atcaaaaagg tttcaaaagc taccgcaaca gctatgatgc gcccttgttc
     2821 aaaatcaagc tggcagacaa aggcgatgcc gcgtttgaaa aagcgcattt cgattcggaa
     2881 acttcagacg gtatcaatcc gcttgctttg ggcagcagca atctgacctt ggaaaaattc
     2941 tccctagaat ggaaagaggg tgtcgattac aacgtcaagt taaacgaact ggtcaatctt
     3001 gttaccgatt tgcagattgg cgcgtttatc aatcccaacg gcagcatcgc accttccaaa
     3061 atcgaagtcg gcaaactggc tttttcaacc aagaccgggg aatcaggcgc gtttatcgac
     3121 agtgaagggc agttccgttt tggcacactg gtttacggcg atgaaaaata cggcccgctg
     3181 gatattcata tcgctgccga acacctcgat gcttctgcct taaccgtatt gaaacgcaag
     3241 tttgcacaaa tttctgccaa aaaaatgact gaggaacaaa tccgcaatga tttgattgcc
     3301 gccgtcaaag gcgaggcttc tggactgttc accaacaatc ccgtattgga cattaaaact
     3361 tttcgtttca cgctgccgtc aggaaaaatc gatgtgggcg gaaaaatcat gtttaaagat
     3421 ttgaagaagg aagatttgaa ccaattgggt ttgatgctga agaaaaccga ggcagacatc
     3481 agaatgagta ttcctcaaaa aatgttggaa gacttggcgg tcagtcaggc aggcaatatt
     3541 ttcagcgtca atgccgaaga tgaggcggaa ggcagggcaa gtcttgacga catcaacgag
     3601 accttgcgcc tgatggtgga cagtacggtt cagagtatgg caagggaaaa atatctgact
     3661 ttgaacggcg accagattga tactgccatt tctctgaaaa acaatcagtt gaaattgaac
     3721 ggtaaaacgt tgcaaaacga accggagccg gattttgatg aaggcggtat ggtttcagag
     3781 ccgcagcagt aatgggtcaa atgccgtctg aaatgttcag gcggcatttt gttgtattgg
     3841 aaactgccgt tttcaaccat tcctttagat aagccgtgtc ggattc
//
LOCUS       DAWEYF010000165         3859 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.165, whole genome shotgun sequence.
ACCESSION   DAWEYF010000165 DAWEYF010000000
VERSION     DAWEYF010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.165"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="WGN93_001794"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="WGN93_001794"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ0227667.1"
                     /translation="MKEFDFIKRYLQTGTDNDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLKRFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="WGN93_001795"
     CDS             1439..1924
                     /locus_tag="WGN93_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ0227668.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WGN93_001796"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WGN93_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ0227669.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
BASE COUNT          783 a          941 c         1078 g         1057 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cttcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 tcgccagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataat
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgcaga tgtcaaacct
      661 gaagacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggtgcg
      721 ataccgcgtt gggtgttgct gagcgcggct ttgcccgaat tggatgaggt atggctgaaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcgttgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgc ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgcgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcgaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccaac ggtcgtgcga
     2161 aatcaccatc acgctaccgg caaattccag caatgcgtct tccagcgcgc gcagggtttc
     2221 tacgtcaagg tcattggacg gttcgtccaa cagcaataca ttgccgccgc ccaacaaggt
     2281 ttttgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 ggaatcgggc tgctctttgc ccgcaatcat tttaaacagt gtcgatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacatt cacaaattca atcacttcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgtgttacc gcaacgactg taccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 agattccgcg tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gtttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattat cgattttggc
     3181 atcccattcc ggcaggcgca gcgcgtcggc ggcgatttcc aattcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg caataatcgc ttccaagcgg ccctgctctt ctgccaacgc
     3301 gtcaaaatcc gcatcaggat tggcgtactc ggcatacact tcttccaaac gtttctgcgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggtttttt caggatcaag
     3421 ctcaggctct tgcggcaggt agccgatttt aatgccgccc atcggcacgg cttcgccctc
     3481 aaattcctta tccacacccg ccataatccg cagcacggtg gacttgcccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgctcacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgctta
     3781 tccctttgaa attatataga caaaaaaata ataatgatag gggatcgccg ccccggcaac
     3841 catttcggat tttccaaag
//
LOCUS       DAWEYF010000166         3814 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.166, whole genome shotgun sequence.
ACCESSION   DAWEYF010000166 DAWEYF010000000
VERSION     DAWEYF010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3814
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.166"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            124..2142
                     /gene="uvrB"
                     /locus_tag="WGN93_001797"
     CDS             124..2142
                     /gene="uvrB"
                     /locus_tag="WGN93_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ0227670.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACDSIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPSNTIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDGGKGRLKGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRGIKENLLF"
     gene            2153..2944
                     /locus_tag="WGN93_001798"
     CDS             2153..2944
                     /locus_tag="WGN93_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227671.1"
                     /translation="MIKMKDIYESICCKSIRKIMYISDSFVAISGTGFIIKFQEKFYF
                     CCLYHCMSNEGKFEKNKLFGLSILYKTYLEIDPKTISESNVANYVLFPNPEQITKEFC
                     SSKIDDDLMLDEEFIPIEIIGENELIPCGYLDFDIEYWSNYLFSEKKPIENEILLVCG
                     FPFSDNEIDYTDDGEIKKVSHQVHIYAGKCKKDDIGFFVEKEDKNVSFDCNGVSGGIV
                     MRMIDGHSEWVGIAVRANNDIIRFIPYYLVAKSIIQNILNRNQQA"
     gene            3063..3134
                     /locus_tag="WGN93_001799"
                     /pseudo
     CDS             3063..3134
                     /locus_tag="WGN93_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            3313..3799
                     /locus_tag="WGN93_001800"
                     /pseudo
     CDS             3313..3799
                     /locus_tag="WGN93_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1094 a          953 c          841 g          926 t
ORIGIN      
        1 ttgggtagcg attgggtttc agacggcata cattcaggat ttcaccgcct tatgccgtct
       61 gaaagacgtt tccgacccat ccctactaca cgctttgtcc gcaaacgcat cacaggcaag
      121 attatggaag tcattcgata ccccgattcc cccttcaaac tccaccaacc cttcccgccc
      181 gccggcgacc agcccaccgc cattgccggc ctgctcgaag ggctttcaga cggccttgcc
      241 tatcaaaccc tgctcggcgt aaccggttcg ggcaaaacct acaccatggc gaacgtcatc
      301 gcccaaagcg gccgacccgc catcatcatg gcgcacaaca aaacccttgc cgcccagctc
      361 tatgccgaaa tgcgcgagtt tttccccgaa aacgcggtgg aatatttcgt ctcctactac
      421 gactattacc agcccgaagc ctatgtgccc agccgcgact tgttcatcga aaaagacagc
      481 gcgatcaatg aacacatcga acaaatgcgc ctttccgcca ccaaaaacct gatgacgcgc
      541 gacgacgtga ttatcgtcgc caccgtgtcc gccatttacg gtatcggcga cccgactgag
      601 tatcaacaaa tggtgttgtc cgtcaaagaa ggcgacacca tcgagcagcg cgacatcatc
      661 gccacgctcg tttccatgca gtacgaacgc ggcgatttgg acttcaaacg cggcagcttc
      721 cgcgtgcgcg gcgacgtgat tgacgtgtac cccgccgaaa gctccgaaaa cgccttgcgt
      781 atcagcctgt tcgacgacga aatcgaccgc ctcgatatgt tcgacccgct ttcaggcagc
      841 cttatccaac gcgtcggccg ctacaccgtc ttcccgtcca gccactacgt taccccgcgc
      901 gacaccgtat tgcgcgcctg tgactccatc aaagaagaat tgcgcgaacg cattgatttc
      961 tttaccaaag aaaaccgtcc cgtcgaacaa caacgcatcg aacagcgcac ccgtttcgac
     1021 ctcgaaatgc tctacgaaat gggcttctgt aaaggaatcg aaaactactc ccgccacttc
     1081 tccggcaaaa aagaaggcga accgccgccc acgctgatgg actacctgcc aagcaacacc
     1141 atcatgttca tcgacgaaag ccacgttacc gttacccaaa tcggcggcat gtacaaaggc
     1201 gacgcctcgc gcaaacaaaa cctcgtagat tacggcttcc gcctgccttc cgcccgcgac
     1261 aaccgcccgc tcaaattcca cgaatttgaa aaagtcatgc cgcaaaccgt cttcgtttcc
     1321 gccactcccg ccaaatacga agaagaacac gccggacaag tggtcgaaca agtcgtccgt
     1381 cccacagggc tggtcgaccc ccaaatcatc atccgccccg tcgccaccca agttgatgac
     1441 ttaatgagcg aaatcaacga ccgtattcaa aaaggcgaac gtgtgctcgt taccaccctc
     1501 accaaacgca tggcggagca actcaccgac tattacagcg aactcggcat caaagtacgc
     1561 tacctgcaca gcgacatcga caccgtagag cgcgttgaaa tcattagaga tttgcggctc
     1621 ggcctgtttg acgtactcgt cggcatcaac ctcttgcgcg aaggcctcga catccccgaa
     1681 gtctccctcg tcgccatcct cgacgccgac aaagaaggct tcctgcgctc ccaccgcagc
     1741 ctgattcaaa ccataggccg cgccgcacgc aacgtgaacg gcgtcgccat cctgtacgcc
     1801 gataaaatca ccgactccat gaaagccgcc atcgacgaaa ccgaacgccg ccgcgaaaaa
     1861 cagattaaat tcaacgaaga acacggcatc gtaccgcagc agattaaaaa acaggtaaaa
     1921 gacattatcg acggcgtgta ccacgaagaa gacggcggaa aaggccgtct gaaaggtaaa
     1981 aacaaggtta aagtgggcga gattcacaac gaagaagatg cgattaaaga aatcgccaaa
     2041 ctcgaaaaag ccatgcagca ggcggctagg gatttgcagt ttgaagaggc ggctgtgttg
     2101 cgggatagga ttcgggggat taaggagaat ttattatttt aggatgtaaa aaatgattaa
     2161 gatgaaagat atttatgagt caatttgttg taaatctatt agaaagataa tgtatatatc
     2221 agatagtttt gtagctattt caggaacggg gtttattatt aaatttcagg aaaaatttta
     2281 tttttgctgt ttatatcatt gcatgtctaa tgaaggaaaa tttgaaaaaa ataaattgtt
     2341 tgggttaagt attttatata aaacatatct tgaaatagat cccaaaacta tatctgaatc
     2401 taatgtagct aattatgtac tttttcctaa tcctgagcaa attacaaaag agttttgtag
     2461 ttcaaaaatt gatgatgatt taatgcttga tgaggaattt atccctattg agattattgg
     2521 agaaaatgaa cttataccat gtgggtattt ggattttgat atcgaatatt ggagtaatta
     2581 tttgttttca gaaaaaaaac caatagaaaa tgaaattctt ttagtatgcg ggttcccttt
     2641 ttcagataat gaaatagatt atactgatga tggtgagatt aaaaaagtat cgcatcaagt
     2701 gcatatatat gctggtaaat gtaaaaaaga cgatataggc ttttttgttg aaaaagaaga
     2761 taaaaatgtt tcatttgatt gtaatggtgt tagtggtgga attgtgatga gaatgataga
     2821 tggacacagt gagtgggttg gaattgctgt tagggcaaat aatgacatca ttcgttttat
     2881 tccttattat ctcgtagcga aatcaataat ccagaatatc ttaaatagaa atcaacaagc
     2941 gtaggtcgga tacttgtatc cgacaaaacc ttcaacattc ccgtcgttgc aatccattgc
     3001 agctatgtcc gaaatgtcgg attcgaaaat ccgacctaca aaatcattcc gagcataaca
     3061 ctatgaaata acgtcgtttt taccgcaatg acggcactta cttttttacg gttgcaacca
     3121 ataaacggca gcaagcgtag ggtgggcact tgttgcccac gcgtttatct ccgaaaggca
     3181 gcaactgtag gtcggatact tgtatccaac aaacctttaa cattctcgtt gttgcaatcc
     3241 attgcagcaa tgcccaaaat gtcggattcg agaatccgac ctacaaaatc attccgaaca
     3301 taatactatg aaataccgtc gttttaccgc aatggcggca cttacttttt tacggttgta
     3361 gccaataaac ggcagaagat tttgaccgat gatgcggtgc gtttggcttt acggcaggcg
     3421 gtaatggcgg tgcgcgaacg gtatccgttt gaaattttgg catgggtgtt gaatgcccga
     3481 ccatctgcat accatatggc ggctgccgga caatgattct gcttattcgg aacgctggcg
     3541 gcagatcaag cggcacagca aatatttaat cggcggcaat ctcaggcttt ggcaaaaacg
     3601 cttttgggaa catactatcc gcgatgaggc cgattttgcc tgccattttg attatctgca
     3661 tttcaatccg gtcaaacatg gctatgtagg acaaatttcc gattggcggt tttctacgtt
     3721 tcaccgttat gtcaaacagg gtatttatcc gcataattgg ggtggcggca atgcggactt
     3781 ttctattgaa tacgattaaa gtaatgtcgg attc
//
LOCUS       DAWEYF010000167         3794 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.167, whole genome shotgun sequence.
ACCESSION   DAWEYF010000167 DAWEYF010000000
VERSION     DAWEYF010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.167"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(553..990)
                     /gene="rnhA"
                     /locus_tag="WGN93_001801"
     CDS             complement(553..990)
                     /gene="rnhA"
                     /locus_tag="WGN93_001801"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ0227672.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1103..1972
                     /gene="tehB"
                     /locus_tag="WGN93_001802"
     CDS             1103..1972
                     /gene="tehB"
                     /locus_tag="WGN93_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEZ0227673.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEILLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGSAEVWSADGGDCVFAPQQVFSVKPKTDDAEIRLSMYCTAADYFH
                     KKYGMSATHSAVSAAQDTVPAGRALDMGCGQGRNALFLGLKGFEVTAADCNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            complement(2022..2828)
                     /gene="thiD"
                     /locus_tag="WGN93_001803"
     CDS             complement(2022..2828)
                     /gene="thiD"
                     /locus_tag="WGN93_001803"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ0227674.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVRTAKSYITAAISSPLEIGAGHGPVNHWAYRD"
BASE COUNT          816 a          926 c         1095 g          957 t
ORIGIN      
        1 tgtaacccct tccaaatcag gacgacacat agggaggtgc tttatgtgtc gtcctgtgtg
       61 ttgaaatata tcggacgcgt ttgaacagtt gtgcggcaaa ctgttttagc ggcaggcaag
      121 agatgccgtc tgatgccgtc tgaagcccat tgtccgtcat tcccacacag gcagttgcta
      181 cggttgctga agccccttag ccgtcgcgca ggcggttgct acggttacta aaatcccgtc
      241 attcccgcgc aggcgggaat ccagtccgtt cggtttcagt tgtttctgat aaatcttgca
      301 gcgttgggtt tttagattcc cgctttcgcg ggaatgacgg ggcggtcgga tgccgcctga
      361 aactccgtca ttcttgcaac ttttcgtcat tcccgtgaaa acgggaatct agaacttcaa
      421 actttcagat aatctttgaa tattgccgtt gcccgacggt ttggattccc gcctgcgcgg
      481 gaatgacggt ggaggacgat gccgtctaaa gcccattagc ggtttcagac ggcatttttg
      541 ccggagcggc agtcaggaaa actgcgctgc gccacggttt gccaaatcgt cggcgcgttc
      601 gttttccgcg tgtcccgcgt gtcctttaac ccaagtccag ctgacttggt gctgcccaac
      661 cagaacgtcg agttctttcc acaagtcgtc gtttttgacg ggctgtttgg cggcggtttt
      721 ccagccgttg cgcttccaac cgtgtatcca gttttccatg ccgtttttga cgtattgcga
      781 gtcggtgcag atgatgacgg tgcagcggcg tttgagcgat ttcagtcctt cgatgacggc
      841 ggtcagctcc atgcggttgt tggtggtttg cgcctcgccg ccgaaaagtt ctttttcgtg
      901 gctgccgtag cgcattaata cgccccagcc gcccgcgccg ggattgcctt tgcacgcgcc
      961 gtcggtgtaa aggtaaacgg gtgtgtccat attgtgcctt tgtgtggtgt ccggcgtgat
     1021 tataagcggt ttgcgcgccg tgccgtctga aagattgcgg cggattgaaa taggcatata
     1081 atgtgcaact ttatttttga atatgaaaga gcggatagtg ggtcaaagcg gcgagttgtt
     1141 ttgtttcgga caaatgcctg tatggaaagt ggaaaacctg ccggaaattt tgttgtcggg
     1201 ctattcgtct gaggaagggg aatgggtctg cctgaatgtg ttgcagggcg atgtcgaagt
     1261 ccgtgcaccg gacgggtcgg cagaggtttg gtcggcagac ggcggcgatt gtgtgtttgc
     1321 gccgcagcag gtgttttcgg tcaaaccgaa aacggacgat gccgaaatcc gcttgtcgat
     1381 gtattgcacg gcggcagact attttcacaa aaaatacggg atgagtgcca cgcattctgc
     1441 agtgtcggcg gctcaggata ccgtacctgc gggcagggcg ctcgatatgg gctgcggaca
     1501 gggacgcaac gcgctgtttc tcggtttgaa ggggtttgaa gttactgccg ccgattgcaa
     1561 tcccgccgcc ttggcaaacg tggcggagct ggcagaggcg gagggtttga acgtccgcac
     1621 gctggaatat gatttgaacg ccgccgcctt gcagggtgag tttgattata ttgtggcaac
     1681 agtggtgctg atgttcctga tgccgcagcg cgtgcctgac gtgattgccg atatgcaggc
     1741 gcatacggcg gcgggcgggt acaatttgat tgtatcggca atggatacgg cggatttccc
     1801 ctgcccgatg ccgttccctt ttaaatttaa agagggagag ctgaaggatt attatcggga
     1861 ttgggagctg gtcgaatata aagaagaatt gggcgcgatg cacgccaaag acgaaaacgg
     1921 caatccgata cggtttaaat ttgtaacgat gctggcgaaa aagcctgaat aatcctcaaa
     1981 aatgccgtct gaacattttg tttcagacgg catttttacg gttagtcccg ataggcccaa
     2041 tgattgaccg ggccgtgtcc cgcgccgatt tccaaagggc ttgagattgc cgccgtgatg
     2101 taggacttgg cagtccgtac ggctttgcaa acgtctaagc cttttgccaa ctcggcggta
     2161 atgcaggcag aaaacgtgca gcccgtgccg tgcgtgtggg cggtcggaaa gcgcgggctg
     2221 tccaattcca gcgtttcgtt ttgcgtaaac agccaatccg tgcagcgtcc gctgctgctg
     2281 ccattcaaat gtccgccttt gatgacgaca tttttgacac cgtaatcaag caggattttt
     2341 gccgcacgtt ccgcatcttt acggttttcg atatgcacgc cggtcagggc ttccgcctcg
     2401 ggcaggttgg gggtcaatac atccgtatcg ggaagcagca ggcgcgtcag tgccgcaacg
     2461 gcggaatcct gcaacagcgg cgcaccgcct ttggcaatca tcacagggtc gagtacgcgc
     2521 ctgccgaagt cgcagtgttt cagcttgtcg gcaacgcatt cgatgatttc cgccgtgccg
     2581 agcattccta ttttgtaggc gcggatgtca aagtcttccc tgattgcttg gatttgtgcg
     2641 gtgatggttt cggtcgggac gagatgaacc gccgacacgc ccaaggtatt ttgcgcggta
     2701 acggcggtga tgacgcacgt tccgaacacg ccgcgcatct gaaacgtttt caaatccgcc
     2761 tgaatgcccg caccgccgcc cgaatccgaa ccggcgatgg taagcgtttg cacaaaagag
     2821 cttttcattt gttcctcctt aatattgtgt ccgataaaaa gggctaatgc ctgtaaaaaa
     2881 gcacggcgat gccgtctgaa aaccgcagcg cggggtttgt ggtgcattat atgccgtatt
     2941 gcaggacaag gcacagggca gggcggcggg gtgcatcgta gcaactgtat ttttgcccga
     3001 cggggtgaaa aatacagttg ctacacccac tgataatgaa aaaagagagc aatgccgtct
     3061 gaaccgcgtg ttgcggcgag cataaaccgg cacgctttat tcgtcatttc cacaaaaaca
     3121 gaaacctaaa attccgtcat tcctacgaaa gcgggaatcc agtgtgttcg gtttcagttg
     3181 tttttgggtt tcgggtgatt tccaaatcat cattcccgcg caggcgggaa tctagccctt
     3241 ggggcagcgg caatatttat aaagccgtct gaaaattcag aagttctaga ttcccgtttt
     3301 cacgggaatg acgaagggtt gtgggaatga cgaagtttca gacggcatcg ccccgccccg
     3361 tcattcccgc ataagcggga atccaaacca ttgggcagag cagccttaaa ggttataaaa
     3421 gactcgtcat tcccacgaaa gtgggaatcc agacctgtcg gcacggaaac ttatcggata
     3481 aaacggtttc ttcaacccta cgctctagat tcccgctttt gcgggaatga cgaagtttca
     3541 gacggcatca aatgctttgt caggcttcag acagcatcgt ccaccctctg ccgtccttcc
     3601 cgcgcaggcg ggaatccaat gtgttcggtt tcggttgttt ttgggtttcg ggtaatttcc
     3661 aaatcgtcat tcccacgaaa gtgggaatcc agaccattgg gcggcggaaa tattcaaaag
     3721 tcgtctgaaa attcagaggt tctagattcc cgttttcacg ggaatgacga agggttgtgg
     3781 gaatgacgaa gttt
//
LOCUS       DAWEYF010000168         3730 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.168, whole genome shotgun sequence.
ACCESSION   DAWEYF010000168 DAWEYF010000000
VERSION     DAWEYF010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.168"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(228..551)
                     /locus_tag="WGN93_001804"
     CDS             complement(228..551)
                     /locus_tag="WGN93_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ0227675.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(632..1288)
                     /locus_tag="WGN93_001805"
     CDS             complement(632..1288)
                     /locus_tag="WGN93_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ0227676.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     ISDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNIVPDVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRQGDVFEEKVLFDTLVAHLDDKDADPFGGFDF
                     "
     gene            complement(1391..1894)
                     /locus_tag="WGN93_001806"
     CDS             complement(1391..1894)
                     /locus_tag="WGN93_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ0227677.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEYLAQFDETDALYLGELAKILEKRF
                     EASRQAA"
     gene            2078..2851
                     /locus_tag="WGN93_001807"
     CDS             2078..2851
                     /locus_tag="WGN93_001807"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ0227678.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2858..3208
                     /gene="secG"
                     /locus_tag="WGN93_001808"
     CDS             2858..3208
                     /gene="secG"
                     /locus_tag="WGN93_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ0227679.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKYGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            3222..3307
                     /locus_tag="WGN93_001809"
     tRNA            3222..3307
                     /locus_tag="WGN93_001809"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3256..3258,aa:Leu,seq:gag)
BASE COUNT         1018 a         1176 c          786 g          750 t
ORIGIN      
        1 cagcctgcac attgaaaatg ccgcccaagc aaactttcag tttgccagcc tcgtcctagc
       61 cctctcccac ggggagaggg gattggggtg caggctgcct ttaaggttca ggcaaatttt
      121 aacttcgttg atactgcgct ttagcttcgc agaagctgca ctttcagacg accttttgga
      181 acaccacagg tacacgcatt taaggaatgc cgtctgaaat gcctgcctca ataacgcatc
      241 atgttgccgt caatctcggc cgcccatgca tcgatgccgc cctgaaggtt gtacaggttt
      301 tcaaaacccg cgtccgccaa atacatcgcc gtatgcaggc tgcggatacc gtgatggcaa
      361 tacaccacaa gcggcacatc atccggcagc tcgttctgcc gcagcggaat cagattcatc
      421 gggatatgca gcgcatttgg cagcgaacaa accgccgttt cttcatccgt acgcacgtcc
      481 aacaaacaaa acatccgccc ttcgtccatc cacgccttca attccgccga cccaagttgc
      541 acaatatcca tcgcaccccc caaaaaaaaa ccaagcaaaa tgccgtctga agccccaaac
      601 ccactttcag acggcatgac ctgtcaacat cttaaaaatc gaaaccgcca aacggatcgg
      661 catccttatc atccaaatgc gccaccaagg tatcgaacag caccttctct tcaaacacat
      721 cgccttgacg cgtaatcaaa agcgcgcgtt gaacaggctt gcggcctacg ataaccacca
      781 tgcgtccgcc atctttcaac tgttctttca acacatcagg cacaatattg accgcaccgc
      841 cgacataaac cgcatcaaac ggcgcacctg cggaaagttc ggtcagcccg ttgttttgca
      901 cataatcgat attgtccaaa cccaagccgt ccaacaccgc tttggcgcgg ttttgctgtt
      961 ccgcatcgat atcgtccgaa attaccctgc ccgccaattt tgccaacagc gcggtcgcat
     1021 agcccgaacc cgtgccgatt tccaaaaccg tatcgttttt cgtcagcttc aagccctgcg
     1081 ccagccgcgc cacgactttc ggctccagca tcttatgacc gttggcaagc ggcagcgcca
     1141 tatccgcata cgccaaaccc tgcaaatcct catcgacaaa aagctcgcgc ggaatctccg
     1201 ccaaagcgtc caaaacgtca aaatccaata catcccaagg acggatttgc tgttcgacca
     1261 tattgaaccg cgctttttca aaatccattt agtgctccgt caaataattg tttcaacaat
     1321 agcaggcatt ataaaaccac actcacgccg cgccaacttc ggcacgcgcc gacagcccgt
     1381 tttgtcagtc tcaagccgcc tgacgcgaag cctcaaaccg cttctccaaa atcttcgcca
     1441 gttcgcccaa atacaaagca tctgtctcat caaactgcgc caaatattcg ctgtccgcgt
     1501 ccaacacgcc gatacagcgg ccgtctgaaa acagcggcac gacaatctcc gaacgcgaca
     1561 aagacgaaca ggcaatatgg tcgggatgcg cgtccacatc cccgacgacc accgtcccgc
     1621 ccttcgccca agcctgaccg cacaccccgc gtccgaacgg aatccgcgta cacgccaaag
     1681 gtccctgaaa cggtgccaaa accaattcgt ccgaacgcgt atcgaccaaa taaaaaccca
     1741 cccaaaacca gccgaacgcc tccttcaaaa ccgccgccgt gttcgccaaa ttcgccaccc
     1801 aatccgtctc gtccgccacc acagactcaa tctgcggcaa cacctcccga taaagcgcgg
     1861 ccttgtccga agccgaaaaa tgaagcgcgt gcatcacatc tcctatagtt gcatacatat
     1921 caggcggcca ttataaaaca acctgcccga aacaacattc caaaccgccc ccgcagccgc
     1981 ccgccccaag ttgcgaaccc gccgcatatc cactaaactt cacattgcaa cgcgccacac
     2041 gcggcagaca gaaaaaacac gacacggagc aaaaaagatg tatcaccaaa tcggaatgtg
     2101 ggatcaaaaa tgggtcatcg gcaactggaa aatgaacggc cggctccaga acaacaattc
     2161 gctcatgcac cgcttccgca tcctccccac cgccgaacgc gtcctcatcg gactcgccgc
     2221 cccgaccgtt tacctgctgc aactgcacaa cgccatgcaa atcgtcttaa acaaccgcat
     2281 cctcacctgc gcccaagacg tgagccgctt ccccgacaac ggcgcgtaca ccggcgaagt
     2341 gtccgccgaa atgctcgccg acaccggcac agacatcgtc ctcatcggac actccgaacg
     2401 cagcctttat ttcggcgaaa aaaacgaaat ccaacgccgc aaaatggaaa acgtcctcaa
     2461 cgtcggactc atcccgttat tgtgcgtcgg cgaaagcctc gaagagcgcg aagccggcaa
     2521 agaacacgaa gtcatcgccc atcagctttc catcctgcaa ggactggaca ccaaaaacat
     2581 cgccgtcgcc tacgaacccg tctgggcgat cggcaccggc aaagtcgcca ccgtcgaaca
     2641 gattgccgat atgcacgcat tcatctacaa agaaatcttg tctttgtgcg gaagcgatgt
     2701 taaaatccgt gtcctttacg gcggaagtgt gaaagcggac aacgcggccg acatcttcgc
     2761 agtaccttat gtggacggcg cactcgtcgg cggcgcgtca ttgtcgtacg actcctttac
     2821 cgccatcatc agtgccgcac aaaatgcgta gaaaaatatg gaagccttca aaaccctaat
     2881 ttggattgtt aatataattt ccgctttggc cgtcatcgtg ttagtattgc tccaacacgg
     2941 caaaggcgcg gatgccggcg cgaccttcgg atcgggaagc ggcagcgcgc aaggcgtatt
     3001 cggctctgcc ggcaacgcta acttcctcag ccgttcgacc gccgttgcag caacattttt
     3061 ctttgcaacc tgcatggcta tggtgtatat tcacacccac acgacaaaat acggtttgga
     3121 cttcagcaac gtacaacaaa ctcagcaagc acccaaaccc gtaagcaata ccgaaccttc
     3181 tgcccctgtt cctcagcagc agaaataaca gtttttcaaa tgccgacatg gtgaaattgg
     3241 tagacacgct atcttgaggg ggtagtggcc gtaggctgtg cgagttcaaa tctcgctgtc
     3301 ggcaccaaca cacaaaacgc ttagaaattc taagcgtttt tttcgtttaa tcctgtctaa
     3361 tgccgtcaac caatcccaat caatacaagg atttcaggct gattgttatc ctgccgtccc
     3421 ccttcctgac agtgcaatcc cgtccaatcc gccctaattg aagtaaccta aaatttacgg
     3481 tatcttttgc ggtatctgaa aaatacctcg aaaaaatacc gcaaaaataa agctgaacga
     3541 ccgccaaatc aggaatgcca agcggaaaag agcttgcggg gaatactgcc aagacgtagg
     3601 gaacaagggg gaaaccgtcc aagatgcagg gcggtttttt ttgggttttt ggaaaaaacc
     3661 tatactagga agcgataccc ttagttgtta ccttgttacc ggggaaaagt tagataaata
     3721 agcatatgaa
//
LOCUS       DAWEYF010000169         3725 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.169, whole genome shotgun sequence.
ACCESSION   DAWEYF010000169 DAWEYF010000000
VERSION     DAWEYF010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.169"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(88..906)
                     /locus_tag="WGN93_001810"
     CDS             complement(88..906)
                     /locus_tag="WGN93_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ0227680.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTGLSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDISRNFSL"
     gene            complement(973..2223)
                     /locus_tag="WGN93_001811"
     CDS             complement(973..2223)
                     /locus_tag="WGN93_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ0227681.1"
                     /translation="MIKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVAADDPFIRNIR
                     AGQNTPDTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="WGN93_001812"
     CDS             complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="WGN93_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ0227682.1"
                     /translation="MSDFPPVSRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHGGGGRKCLLTAHTERGSESLPL"
     gene            2871..3683
                     /locus_tag="WGN93_001813"
     CDS             2871..3683
                     /locus_tag="WGN93_001813"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ0227683.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAGNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          826 a          906 c         1116 g          877 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggtgtg tccactgtgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcgggaaa tatccatatc
      121 aggctgtggg ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggag aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatgcagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaaag gattttctat tttgggagct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttagataa aggggtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttcgg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggctcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactgt acacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gtccgttaaa acagataaag gaagccgatc ggacaatccg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggtgga agtaggttta tgcctgcctt catccgacta
      961 ccgccttttc aatcaacccc gcttcaatac ggatgtattg atgtagcgtt ggacacccga
     1021 ggcaatggat tgggcgcact gccggcggaa ggattcgctg cccagcaact tctcttcagc
     1081 agggttggac aggaaggcgg tttcgaccag gatagacggc atatcgggtg cgcgcaaaac
     1141 ggcgaaattg gcttcgtcca ccctgccttt gtgcaagtgg ttgagcctgc ccaattcttc
     1201 aagcaccagt ttgccgagtt tgcggctgtc gcgcagcgtg gcggtttggg tcatatcgag
     1261 cagggcggta tcgacgttgc ggttgccgct ggtcggtacg ccgccgaccg cgtcggcatt
     1321 gttttgcgtc tgttccaaga atttggcggc ggagctggtc gcgcctttgg tgttcagcat
     1381 atagaccccc gttccgcgcg cggaggggct ggtgaaagcg tcggcgtgga tggagacgaa
     1441 tacgtccgcc cgccgtgcgc gccctttggc gacacgcacg cccaaaggga tgaacacgtc
     1501 ttcgttgcgc gtcataaaga cgttgtaacc caaggcttcc aattgttttt tggtttcgcg
     1561 ggcgatggag aggacgacgt gtttttcctg caaaccgccc gggctgacgg cgccggggtc
     1621 ttcgccgccg tgtccggggt cgatcataat gacgggtctg cgcccgtttt tgccgcgttc
     1681 ggtttgtgca ggagtgtttt gagcgaggtc ggcttcaggg gagccgcgac gggttttgtt
     1741 caggctgccg ttaagcagag ccatcatcgg atcgtcggga tccatccctt gcggatagag
     1801 atcgacgacg aggcggtttt taaagccgcc gacggggggg agggaaaaaa cttgcgcgta
     1861 ggaaggctgt ttcaaatcga tgacgaggcg gacggtgtcg ggcgtgttct gaccggcgcg
     1921 tatattgcgg ataaaggggt cgtccgccgc cactttttgg gacagtccgt gcaatacggt
     1981 attgatgttt gcgttttgta tgtcgacgac cagcctgccc ggattgtcga gcgcgaagtg
     2041 ctggtatttg agcgcggcgg tgctttccag cgttaggcgg gtgtaggtgt gcgacggcca
     2101 tatccgtgcg gcggtgaatt gcggggcgcg taccgttttg gcaacggcgg atgcgatggg
     2161 gcttagggcg aacagtgtgc cggcggtgcg gcggatgatt tgtcttcgtg tcagtttgat
     2221 catagcggca ggctttcgct tcctcgttcg gtatgggcgg tcagcaggca ttttctgccg
     2281 ccgccgccgt gtgtcaatgt tgcggtgatg tcggcgggcg gcgtaaattc cccgccctgt
     2341 tgcggccatt cgatcaggca gacgctgttt gcggcaaaca gttcgtcaag ccccgcgtct
     2401 tcccattctt cggggaacga gaagcggtag aggtcgaaat ggtgcaaggt gaagcgttcc
     2461 agcggataag attcgacgat ggcgtaggtc gggcttttga ctgcgccctg atgacccaat
     2521 ccgcgcagga ttccgcgtgt cagcgtggtt tttcccgcac ccaaatcccc ttcgaggtaa
     2581 atgaccagcg gtgcgtttaa acgggaagac cacgccgcac ccaaatcgag tgtggcggct
     2641 tcgtcggcaa ggaatcggga aacgggagga aaatcagaca taggggcttt acaactttta
     2701 tgtggcggat cggaggggca ggcggtcgga aaaccgtgcg cccggcggta gcattgccgt
     2761 atattataac agccaaatcc gcatcctgct ttcagacggc aacggctgtc aagaaaaagc
     2821 ggcacgtgta caatacgcag attgtatgtt taggacggat tggaaaaagg atggaaaata
     2881 tcggcaggca gcgacccatc ggcgtttttg actcgggaat cggcggtttg accaatgtgc
     2941 gcgcgctgat ggagcggctg ccgatggaga acatcattta tttcggcgat acggcgcgcg
     3001 tgccttacgg gacgaaatct aaggcgacca tcgaaaattt ctcgatgcag attgttgatt
     3061 ttttattgga acacgatgtc aaggcgatgg ttatcgcgtg caacacgatt gcggcggtgg
     3121 cggggcagaa aatccgtcaa aagacgggca atatgccggt tttggacgtg atttccgccg
     3181 gcgcgaaagc cgcgctggca acgacgcgca acaacaaaat cggcattatc gccaccaata
     3241 cgacagtcaa cagcaacgcc tatgcgcgcg ccatccatag gaacaacccc gacacgcttg
     3301 tccgcacgca ggccgcgccg ctgctcgtcc ctttggtgga agagggctgg ttggaacacg
     3361 aagttacccg cctgaccgta tgcgaatacc tcaaaccatt gcttgcagac ggcatcgata
     3421 cgctggtgtt gggctgcacg cactttccct tgctcaagcc cttaatcggc agggaggcgg
     3481 gcaatgtcgc gttggttgat tctgcaatta caacggccga agaaaccgca cgcgtccttg
     3541 ctcaggaagg attgctcaat accgacaaca acaatcccga ctaccgtttt tacgtcagcg
     3601 atattccttt gaaattcaga accatcggcg agcgttttct gggcaggacg atggagcaga
     3661 ttgaaatggt gtctttgggt taaaacgatg acggaaagct gcccgagatt acagaaacct
     3721 aaaat
//
LOCUS       DAWEYF010000170         3716 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.170, whole genome shotgun sequence.
ACCESSION   DAWEYF010000170 DAWEYF010000000
VERSION     DAWEYF010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3716
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.170"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            275..3472
                     /gene="nalP"
                     /locus_tag="WGN93_001814"
     CDS             275..3472
                     /gene="nalP"
                     /locus_tag="WGN93_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HEZ0227684.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGTSAPDFNAGGTG
                     IGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHTGD
                     FTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNENY
                     KNYTAYMRKEAPEDGGGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIGGR
                     SVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTTSR
                     AGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFIFS
                     ASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAPYE
                     ASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAVGV
                     DSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGSQL
                     QLHGNNTYTGKTVIEGGSLVLYGNNESDMRVETKGALIYNGAASGGSLNSDGIVYLAD
                     TDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAIIGGKLYMSARGKGAGYLNR
                     TGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNAAR
                     TASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGIRP
                     YGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHNAT
                     GLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWSENS
                     ANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQL
                     GALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSITEGTLVGLAGLK
                     LSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLGA
                     DVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1008 a         1014 c          986 g          708 t
ORIGIN      
        1 atccactata actagggaaa ttcaaattaa gttagaatta tccctataag aaaaagccgt
       61 ctaagccggt ataaacaaaa taaactcatt gagctatttg tcgaaagttc aaatttccat
      121 tttaaaacaa ttagtaaaat cgagtttatc ctagttgtcc aagacaaccc ctataataat
      181 ataattcaaa atataaaaat gggttacatc taaacattac ggaattttta ttccctcgcc
      241 tgaattctat tgtcagattc aaggagacct catcatgcga acgaccccaa ccttccctac
      301 aaaaactttc aaaccggctg ccatggcgtt agctgttgca acaacacttt ctgcctgctt
      361 aggcggcggc acttctgcgc ccgacttcaa tgcaggcggc accggtatcg gcagcaacag
      421 cagggcaaca acagcgaaat cagcagcagt atcttacgcc ggtatcaaga acgaaatgtg
      481 caaagacaga agcatgctct gtgccggtcg ggatgacgtt gcggttacag acagggatgc
      541 caaaatcaat gccccccccc cgaatctgca taccggagac tttacaaacc caaatgacgc
      601 atacaagaat ttgatcaacc tcaaacctgc aattgaagca ggctatacag gacgcggggt
      661 agaggtaggt atcgtcgata caggcgaatc cgtcggcagc atatcctttc ccgaactgta
      721 tggcagaaaa gaacacggct ataacgaaaa ttacaaaaac tatacggcgt atatgcggaa
      781 ggaagcgcct gaagacggag gcggtaaaga cattgaagct tctttcgacg atgaggccgt
      841 tatagagact gaagcaaagc cgacggatat ccgccacgta aaagaaatcg gacacatcga
      901 tgtggtctcc catattattg gcgggcgttc cgtggacggc agacctgcag gcggtattgc
      961 gcccgatgcg acgctacaca taatgaatac gcatgatgga accaagaacg aaataatgtc
     1021 tgcagccatc cgcaatgcat gggtcaagct gggcgaacgt ggcgtgcgca tcgtcaataa
     1081 cagttttgga acaacatcga gggcaggcac tgccgaccat ttccaaatag ccaattcgga
     1141 ggagcagtac cgccaagcgt tgctcgccta ttccggcggt gataaaacag acgagggtat
     1201 ccgcctgatg caacagagcg attacggcaa cttgtcctac cacatccgta ataaaaacat
     1261 gcttttcatt ttttcggcaa gcaatgacgc acaagctcag cccaacacac tgaccctatt
     1321 gccattttat gaaaaagacg ctcaaaaagg cattatcaca gtcgcaggcg tagaccgcag
     1381 tggagaaaag ttcaatggct ccaaccattg cggaattact gccatgtggt gcctatcggc
     1441 accctatgaa gcaagcgtcc gtttcacccg tacaaacccg attcaaattg ccggaacatc
     1501 cttttccgca cccatcgtaa ccggcacggc ggctctgctg ctgcagaaat acccgtggat
     1561 gagcaacgac aacctgcgta ccacgttgct gacgacggct caggacatcg gtgcagtcgg
     1621 cgtggacagc aagttcggct ggggactgct ggatgcgggt aaggccatga acggacccgc
     1681 gtcctttccg ttcggcgact ttaccgccga tacgaaaggt acatccgata ttgcctactc
     1741 cttccgtaac gacatttcag gcacgggcgg cctgatcaaa aaaggcggca gccaactgca
     1801 actgcacggc aacaacacct atacgggcaa aaccgttatc gaaggcggtt cgctggtgtt
     1861 gtacggcaac aacgaatcgg atatgcgcgt cgaaaccaaa ggtgcgctga tttataacgg
     1921 ggcggcatcc ggcggcagcc tgaacagcga cggcattgtc tatctggcag ataccgaccg
     1981 atccggcgca aacgaaaccg tgcacatcaa aggcgatctg cagctgggcg gcgaaggtac
     2041 gctgtacaca cgtttgggca aactgctgaa agtggacggt acggcgatta tcggcggcaa
     2101 gctgtacatg tcggcacgcg gcaaaggggc aggctatctc aaccgtaccg gacaacgtgt
     2161 tcccttcctg agtgccgcca aaatcgggcg ggattattct ttcttcacaa acatcgaaac
     2221 cgacggcggt ctgctggctt ccctcgacag cgtcgaaaaa acagcgggca gtgaaggcga
     2281 cacgctgtcc tattatgtcc gtcgcggcaa tgcggcacgg actgcttcgg cagcggcaca
     2341 ttccgcgccc gccggtctga aacacgccgt agaacagggc ggcagcaatc tggaaaacct
     2401 gatggtcgaa ctggatgcct ccgaatcatc cgcaacaccc gagacggttg aaactgcggc
     2461 cgccgaccgc acagatatgc cgggcatccg cccctacggc gcaactttcc gcgcagcggc
     2521 agccgtacag catgcgaatg ccgccgacgg tgtacgcatc ttcaacagtc tcgccgctac
     2581 cgtctatgcc gacagtaccg ccgcccatgc cgatatgcag ggacgccggc tgaaagccgt
     2641 atcggacggg ttggaccaca acgctacggg tctgcgcgtc atcgcgcaaa cccaacagga
     2701 cggtggaacg tgggaacagg gcggtgttga aggcaaaatg cgcggcagta cccaaaccgt
     2761 cggcattgcc gcgaaaaccg gcgaaaatac gacagcagcc gccacactgg gcatgggaca
     2821 cagcacatgg agcgaaaaca gtgcaaatgc aaaaaccgac agcattagtc tgtttgcagg
     2881 catacggcac gatgcgggcg atatcggcta tctcaaaggc ctgttctcct acggacgcta
     2941 caaaaacagc atcagccgca gcaccggtgc ggacgaacat gcggaaggca gcgtcaacgg
     3001 cacgctgatg cagctgggcg cactgggcgg tgtcaacgtt ccgtttgccg caacgggaga
     3061 tttgacggtc gaaggcggtc tgcgctacga cctgctcaaa caggatgcat tcgccgaaaa
     3121 aggcagtgct ttgggctgga gcggcaacag catcactgaa ggcacactgg tcggactcgc
     3181 gggtctgaag ctgtcgcaac ccttgagcga taaagccgtc ctgtttgcaa cggcgggcgt
     3241 ggaacgcgac ctgaacggac gcgactacac ggtaacgggc ggctttaccg gcgcgactgc
     3301 agcaaccggc aagacggggg cacgcaatat gccgcacacc cgcctggttg ccggtctggg
     3361 cgcggatgtc gaattcggca acggctggaa cggcttggca cgttacagct acgccggttc
     3421 caaacagtac ggcaaccaca gcggacgagt cggcgtaggc taccggttct gacggacagg
     3481 aagcagacag ccgcaaagat cacggtcttt gcggctgttt cttatgaaaa gaaaacccta
     3541 ttccaattgc ctgcttctat tgtttcaaga cttcttccaa agattcggca tcaatcagat
     3601 gtatagcgga ttaacaaaaa tcaggacaag gcggcgaagc cgcagacagt acagatagta
     3661 cgaaaccgat tcactcggtg cttcagcacc ttagagaatc gttctctttg agctaa
//
LOCUS       DAWEYF010000171         3703 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.171, whole genome shotgun sequence.
ACCESSION   DAWEYF010000171 DAWEYF010000000
VERSION     DAWEYF010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.171"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..414)
                     /locus_tag="WGN93_001815"
     CDS             complement(<1..414)
                     /locus_tag="WGN93_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEZ0227685.1"
                     /translation="MTHISSPRNEFIRGIKESSPILIGLLPWALILGMQGGQKGMSWL
                     EMLLMTSMNFAGGSEFATVNLWAESLPILLIATVTFMINSRHILMGAALALHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNMP"
     gene            559..1011
                     /gene="dut"
                     /locus_tag="WGN93_001816"
     CDS             559..1011
                     /gene="dut"
                     /locus_tag="WGN93_001816"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ0227686.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGSH"
     gene            1089..2276
                     /gene="dapC"
                     /locus_tag="WGN93_001817"
     CDS             1089..2276
                     /gene="dapC"
                     /locus_tag="WGN93_001817"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ0227687.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTLNSDTEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDFQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLKRGREKLVMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            2538..3317
                     /gene="yaaA"
                     /locus_tag="WGN93_001818"
     CDS             2538..3317
                     /gene="yaaA"
                     /locus_tag="WGN93_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ0227688.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3400..3490
                     /locus_tag="WGN93_001819"
     tRNA            3400..3490
                     /locus_tag="WGN93_001819"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3434..3436,aa:Ser,seq:tga)
     gene            3568..3657
                     /locus_tag="WGN93_001820"
     tRNA            3568..3657
                     /locus_tag="WGN93_001820"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3602..3604,aa:Ser,seq:cga)
BASE COUNT          971 a          864 c          911 g          957 t
ORIGIN      
        1 aggcatattg aatgcgggca aaccggctgc tttccgtttt tggatttcgg agaatgccat
       61 cgcccagctt tcatcacaca taaaaaacag tgcgggcacg gcttttttca gcggtatttc
      121 tttcaggtgc agggcaagtg ccgcccccat caggatatgc cgcgaattaa tcataaaggt
      181 tacggtggcg ataagcagta tcggcagaga ttccgcccac aggttgaccg tggcaaactc
      241 ggagccgccg gcgaagttca tactggtcat caacaacatt tccagccagc tcatgccttt
      301 ttgtccgccc tgcataccga gtattaatgc ccaaggcaga agtccgataa gtatgggcga
      361 actttctttg atgccgcgta taaattcgtt acggggcgag cttatgtgtg tcatattata
      421 atattgatat gtaagaaggt cgggcattat acacagacgg agtatttcaa aacaaaaccg
      481 atttgccgtg tttcagcgta aacacggctt gtgtataatc tcccatcttt aaaaccggcc
      541 gtatgcagga gcaagatgat gaatattgaa gtagaaatga aagtgttgga cgagaggatg
      601 gcggatttta tccctgccta tgcgacggag ggttctgctg gtttagattt gcgtgcctgt
      661 ttggatgagg aagttgtctt gcagccgggt gaaacgtttc ttgtaccgac aggtttggca
      721 atttatttgg cgaatcccgc atatgccgcc gttttgctgc cccgttccgg attggggcat
      781 aaacacggca ttgttttggg caatttggtc ggcttgattg actccgatta tcaaggggaa
      841 ttgaaggttt cgttatggaa cagaagcagc gagccgttta ctgtcaaacc gtttgagcgt
      901 atcgcgcaga tggttatcgt gccaatcgtg caggcgcgtt tcaaacgtgt cgaggaattt
      961 gtcggaagca gccggggaga aggcggcttc ggcagtacgg gttctcacta aaaatataga
     1021 atgccgtctg aaagacacgt caggttcaga cggcatatct tccgatatac cgacaaccgg
     1081 agaaaatcat gaatacctta ctcaaccaac tcaaacccta tccctttgcc cgactgcgtg
     1141 aagcgatgca gggcatttcc gcccccgaag gtctggaagc cgtcccactg catatcggcg
     1201 aaccgaaaca tccgacaccg aaagtcatta cggatgcgct gaccgcctca ttgcacgagt
     1261 tggaaaaata tccgctgacg gccggtttgc ctgaactgcg tcaggcgtgt gcgaactggt
     1321 taaaacgccg ttatgatggg ttgacgctga attccgacac cgaaattctg ccggttttgg
     1381 gaagtaggga ggcgttgttt tcttttgtcc aaaccgtgtt gaaccctgtt tcagacggca
     1441 tcaaacccgc aattgtcagc ccgaatccct tttatcagat ttacgaaggt gcgacacttt
     1501 tgggcggcgg tgaaatccat tttgccaatt gccccgcgcc gtctttcaac cccgattggc
     1561 gtagtatttc cgaagaggtt tggaaacgca ccaaactggt gttcgtctgc tcgcccaaca
     1621 accccagcgg cagcgtgctg gatttggacg gctggaaaga agtttttgat tttcaagaca
     1681 aatatggttt cattattgcc tcggatgaat gctattccga aatctatttc gacggtaaca
     1741 aacctttagg atgtctgcaa gctgcagcgc aattgaaacg gggcagggaa aaactggtta
     1801 tgtttaccag tttgtccaag cggtccaatg ttccaggcct gcgttccggt tttgtcgccg
     1861 gcgatgccga actgcttaaa aattttctgc tttacagaac ctatcacggc agtgcaatga
     1921 gcattcccgt gcagcgcgca agcattgccg cttgggatga cgaacagcac gttatcgaca
     1981 accgccgcct gtatcaggaa aaatttgagc gcgttattcc cattttgcaa caggtatttg
     2041 acgttaaatt accggatgcc tcgttttaca tctggttgaa agtccccgat ggcgacgatt
     2101 tggcatttgc acgcaattta tggcaaaaag ccgctatcca agtattgccc ggacgctttt
     2161 tggcacggga taccgaacag ggcaatcccg gggaaggtta tgtccgtatc gctttggttg
     2221 ccgatgtcgc aacttgtgtc aaagctgcgg aagacatagt ttcactgtat cggtaaggaa
     2281 tcggaaatgc cgtctgaact tttgttcaga cggcattttt caatattcta cggttgaatt
     2341 tgctgtaacg gtatttatag tggattaaca aaaatcagga caaggcgacg aagccgaaga
     2401 cagtacagat agtacggcaa ggcgaggcaa cgctgtactg gtttaaattt aatccactat
     2461 acttcacttt taatcggctt gcccgcaaac acgtttaaac ttaaaatccc cgtgtttgac
     2521 acaataccga gcagattatg ttttttgtcc tttcccctgc gaagaacctt aatgaaaaag
     2581 accctgcccc tgtcagcgag tttacccaac ccgacctgct ggcagagtcc gacattctaa
     2641 tgcagcagtt gcgcgagctt gcgccgcaac agattgccga actgatgcac gtttccgaca
     2701 aaattgccct cttaaacgcg cagcgcaatg cagaatggaa cacgccgttt acgccggaaa
     2761 acgccaaaca ggcggtcttt atgttcaacg gcgatgttta cgaaggtatg gatgcaaaca
     2821 cattggatat tggacagata cgctatctgc aaaaccatgt ccgcctgctg tccggtctgt
     2881 acggtcttct tcgcccgtta gacctgatac agccctaccg tttggaaatg gggacggcat
     2941 ttgccaattt gcgcggcaag aatttgtatg agttttgggg cgacatcatt accaaccttt
     3001 taaatgacac gcttgcccaa gcaggcagca atacgcttgt caaccttgcc tcacaggaat
     3061 atttcaagtc cgtcaacacg aaaaaacttc gggcgcggct gattaccccg atatttaaag
     3121 acgaaaaaaa cggtaaatat aaaatcatca gtttctatgc caagcgtgcg cgtggattaa
     3181 tggtgcgcta tgcggcagaa catcatatta ccgaccctga aatgctgaaa aattttaatt
     3241 acgaaggcta cgcattcaat gacgcggctt caaatgaaag cgaatgggtt tttatgcgtt
     3301 cggaacaaat aaagtgaaaa caataaatta agtattttcc gaaaaaagtg cttggcaaaa
     3361 tgtataaatt tcattattat tcctaatctt caagaagacg gaagcgtggc agagcggttt
     3421 aatgcaacgg tcttgaaaac cgtcgagggt tgatagccct ccgtgagttc gaatctcacc
     3481 gcttccgcca atccttgagg tcaaaaacca aataaaaatg aagtagcata aagcatcggc
     3541 atttttattt ggttttactg cattatcgga aacgtggcag agaggctgaa tgcagcggac
     3601 tcgaaatccg ctgagggtgc aaatcctccg tgggttcgaa tcccaccgtt tccgccacaa
     3661 aacaaaaccg ccctgattcg gggcggttct tttttgttca agt
//
LOCUS       DAWEYF010000172         3581 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.172, whole genome shotgun sequence.
ACCESSION   DAWEYF010000172 DAWEYF010000000
VERSION     DAWEYF010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.172"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            329..3419
                     /locus_tag="WGN93_001821"
                     /pseudo
     CDS             329..3419
                     /locus_tag="WGN93_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
BASE COUNT          996 a          901 c          945 g          739 t
ORIGIN      
        1 ctgtcgggca tctgcagcgg tttgctaaaa aacgctttac cgtgatcagt gtgcaaagtt
       61 aaaatgggga ggtaagcttt tcaatcagca atccggcggg cgcgggatcg ggcggtttgc
      121 cgaatcccgc cgtttgcggc gcgcctgccg ccgacggtat cccgcgaagc aagatttaag
      181 ggataaaata tgttccaaca cgcagggcgg cacataaggc gccgccctga ttcggaaggg
      241 gctgcatccc tcccggacaa agcctgatcc tgccgccccg aaggacggat gcccgaaggg
      301 cggggggttt gaccgaaaag gaaatacgat gaataaaact ttaaaaaggc gggttttccg
      361 ccataccgcg ctttatgccg ccatcttgat gttttcccat accggcgggg ggggggcgca
      421 ggcgcaaacc cgtcaatacg ctattatcat gaacgaggga aaccagcccg aggtacagtg
      481 gaatgggtca tattcaataa aggacaaaga caggaagcgc gaatatactc atcataatca
      541 ctcacgagga ggaagctctg tctcattcaa caatagcgat gagcttgttt ctcaacaaag
      601 cggtactgcc gtttttggca cagccaccta cctgccgccc tacggcaagg tttccggttt
      661 tgatgccgac gggctgaaca agcgcggcaa tgccgccggt tggattcgta ccacccgcat
      721 cgcgctggca ggctacagct acgaaggtat cgtatgcaga agcggcacag gctgtcccaa
      781 acttgtctat aaaacccgat tttccttcga taatcccgac ttggtaaaaa atgcgggcag
      841 gctggatagg cacacagacc caagccgcga aaattcgccc atttacaaat tgaaggatta
      901 tccatggttg ggcgtatctt tcaatttggg tgccgagggt accaccaaag atggtaagac
      961 aatcaacaaa ttggtatctt cttttgatga aaagaatagt agtaataaca acctcgtcta
     1021 taccacggaa ggccgcgata tttccttggg cgactggcag cgcgaaaaga ccgccatggc
     1081 ctattttctg aacgccaaac tgcacctgct ggacaaaaaa gggattaaag atatcaccaa
     1141 caaaacagtg cagttgggtg tcttgaggcc gagcatcgat gtgcggctgc aaagaaatac
     1201 ggggcttgcc ggcttgctaa atttttgggc tagttgggac attaaagata acgggcagat
     1261 tccggtcaag ctcggcctgc cggaagtcaa agcaggccgc tgcatcaacg caaataaccc
     1321 caataagagt accaaagccc cttcccccgc actgactgcc cccgcgctgt ggttcggacc
     1381 tgtgcaaaat ggtaagatgg agatgtattc cgcttcggtt tctacctacc ccgacagttc
     1441 gagcagccgc atcttccttc aaaatctgaa aagaaaaaac gaccccaaca aacccggccg
     1501 ctattccctc gcaaccttga ataagtcgga tattgaaagt cgagagccga ctttcacagg
     1561 gcggcaaacc gtcatccgat tggataaagg cgtacatcag atcaaactta aaggcaatga
     1621 ggtcgaaggt tttaagggaa acaacggcaa cgacactttc ggcattgttt agtgaaggga
     1681 gcttcatgcc tgatgacagc gagtggaaaa aagtgctgct gccttggacg gttcggggtg
     1741 tcaatgacga tcaatttaaa acattcaaca aagaagaaaa aaacggcaag ccaaaataca
     1801 gtcaaaaata ccgcagccgc gacaacggca agcacgagcg caatttgggc gacatcgtca
     1861 acagccccat cgtggcggtc ggcgagtatt tggctacttc cgccaacgac gggatggtgc
     1921 atatcttcaa aaaaggcaac ggggacgcgc gcaactatag tctgaagctc agttatatcc
     1981 cgggcacgat gccgcgcaag gatattcaaa acaccgaatc cacccttgcc aaagagctgc
     2041 gcgcctttgc cgaaaaaggc tatgtgggcg accgctacgg cgtggacggc ggctttgtct
     2101 tgcgccaagt taacaactta aatgggcaag accgcgtgtt tatgttcggc gcgatgggct
     2161 ttggcggcag aggcgcatac gccttggatt tgaccaaagc cgacagcaat aacccgaccg
     2221 ccgtttccct gtttgatgtc aaaaatgaca aaaataaagg caataatagt gcagaattag
     2281 gctacaccgt cggcacaccg caaatcggca aaacccacga cggcaaatac gccgctttcc
     2341 tcgcctccgg ttatgcgact aaaaccattg acgaccaaca aaataaaacc gcgctgtatg
     2401 tgtatgattt ggaaagcagc ggtacgctga ttaaaaaaat cgatgtaccc ggcggcaagg
     2461 gcgggctttc gtcccccacg ctggtggata aagatttgga cggcacggtc gatatcgcct
     2521 atgccggcga tcgcggcggg aatatgtacc gctttgattt gagcggtcaa gatcctaatc
     2581 aatggtctgt acgcaccatt ttcagcggca acaaaccgat tacttccgca cccgccattt
     2641 cccaactgaa agacaaacgc gtggttatct tcggtacggg cagtgatttg agtgaggaag
     2701 atgttgataa taatgatata caatctattt acggtatttt tgacaatgac acagacacgg
     2761 gtacggcgca agacgggcag ggcaacgggc tgctcgagca agtgctgaaa aaagacggca
     2821 atacgctgtt cttaagcgac tacaaaaggt ctaacggctc gggcgataag ggctgggtag
     2881 tgaaattgga agccggacag cgcgttaccg tcaaaccgac cgtggtattg cgtaccgcct
     2941 ttgtaaccat ccataaatat acgggtacgg acaaatgcgg cgcggaaacc gccattttgg
     3001 gtatcaatac cgccgacggc ggcaagctga ccaagaaaag cgcgcgcccg attgtgccgg
     3061 aagccaatca ggctgtcgcg caatattccg gtcataagaa aggcaccaac ggcaaatcca
     3121 tccctatagg ttgtatgtgg aaaaacaatg aaaccgtctg cccgaacgga tatgtttacg
     3181 acaaaccggt taatgtgcgt tatctggatg aaaagaaaac agacggattt tcaacaacgg
     3241 cagacggcga tgcgggcggc agcggtatag accccgccgg caagcgttcc ggcaaaaaca
     3301 accgctgctt ctcccaaaaa ggggtgcgca ccctgctgat gaacgatttg gacagcttgg
     3361 acattaccgg cccgacgtgc ggtatgaaac gaatcagctg gcgtgaaatc ttctactgat
     3421 ttgcacgcga aaatgccgtc cgaaaggttt tcggacggca ttttttgcgt ttttcgggag
     3481 gggcgggttc gtaaaaggcg ggctataggg taggcttcat ctcgccaatc tcactgaatc
     3541 catcaatttc cacaattcaa ttaaataccg tcaaaccgat g
//
LOCUS       DAWEYF010000173         3488 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.173, whole genome shotgun sequence.
ACCESSION   DAWEYF010000173 DAWEYF010000000
VERSION     DAWEYF010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.173"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(214..1278)
                     /locus_tag="WGN93_001822"
     CDS             complement(214..1278)
                     /locus_tag="WGN93_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ0227689.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRENRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIIH
                     NGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTENIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAH
                     QCVAARFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WGN93_001823"
     CDS             complement(1279..2037)
                     /locus_tag="WGN93_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ0227690.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WGN93_001824"
     tRNA            complement(2112..2187)
                     /locus_tag="WGN93_001824"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3377)
                     /locus_tag="WGN93_001825"
                     /pseudo
     CDS             complement(2241..3377)
                     /locus_tag="WGN93_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3322..>3488)
                     /locus_tag="WGN93_001826"
     CDS             complement(3322..>3488)
                     /locus_tag="WGN93_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ0227691.1"
                     /translation="FIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYSGLARTFP
                     RIGSATGCAD"
BASE COUNT          793 a          843 c          925 g          927 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac gggcggcgac gcattgatga gctgccgttg ccagtgcgtt
      301 ttttgcttcg gggtttaaga cgaggcgttc gatttcgtcc gccaaagatt caggcgtaag
      361 cctatccagc agaatccccg attgatgatg ttcgacaatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caatgttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatcaggat gtccgtgccc tgccaatttg agtctgattt gaggatattt
      661 ccgatgcaat atcacacagg cttcaattag gttttccaat cctttttccg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaccg
      781 atcggtatcg ataccgttat gaataatccg gtatttttct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tctgtgtttt tctgtatcag
      901 gcggtggtaa aaatcggttt tgttggcgac gacattatgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggttttccc ggataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg gaaaagcgtc tgtgcatcaa
     1141 ctcattattt ttattgacgg cggtaaacat tgtgcagccc cgaagcccca atgcttttga
     1201 aacatcatag acatattgtt cgcccccacc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccagatttg tacagataat atagtttgac
     1321 atatttaatc atcgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 aagaaaccct ttgttcagaa tataaatttt gaaaaaaccc caaatcggac ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg agatggaagt
     1501 atatttgttg aacttgttga aatattgttc ccagttgtcg tacgtataat ggtacataaa
     1561 atgtttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct ttcttcggca tcaaacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ctcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccgttcaaa tgccgttgga agacttttgc acccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcgtcga taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcccgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc cccgaaggca
     2281 aacgatgagc tggcggcaat gcgtttttcg gtttcccagc ggctgccgct gccggtcagg
     2341 ttgatggcgg gcaggttggg gtcgttctgc ccgtcccaaa gccggggcgg aagttttcct
     2401 tcgggattgc tttgccggtt ggcaatgccc cacgcgaacg cggcttcgat tgcgtccgcc
     2461 gcgcccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcgcggct ttccatattg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttacgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattttc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgggaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagcccg aaaaagatgc cgatattggc ggcggcggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacatgcc ggtcagcaac
     3121 aattcgccta catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atgcgtccgt cagtaatgct ttcgtctccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgccgtta atgtggtttt gacggtctgc aaattccttg gaatggttga tgcggtaatg
     3481 gataaaac
//
LOCUS       DAWEYF010000174         3392 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.174, whole genome shotgun sequence.
ACCESSION   DAWEYF010000174 DAWEYF010000000
VERSION     DAWEYF010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.174"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            43..708
                     /locus_tag="WGN93_001827"
     CDS             43..708
                     /locus_tag="WGN93_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ0227692.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTVNNKCDSGKKGQGMLAFGDKNGNK
                     TYDGDAADVFLRSVVLNDTDDSRINYAFNHIAFGSSQPTADRVVWTFNQNGTFGYTKD
                     QHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNNRRTVC
                     QYK"
     gene            738..1352
                     /gene="pilV"
                     /locus_tag="WGN93_001828"
     CDS             738..1352
                     /gene="pilV"
                     /locus_tag="WGN93_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ0227693.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSVVDGDFQVDA
                     IKTKTQLAEAQLKRFSYELKNALPDAAAIYYAICKDSSGVAPTLSAGSTFSSNCDASA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            1349..2290
                     /locus_tag="WGN93_001829"
     CDS             1349..2290
                     /locus_tag="WGN93_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ0227694.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLSAQQDLRNAATLIVRDARMAGGFGCFNMSEHLATDVVSDVAQKNRL
                     FSLKRNSTNKLIPITESSNINYQNFFQVGSALIFQYGIDDVNASAATTVVSSCAAILK
                     PGKQILTLENVKKELNIPDTDNRQNGNIARQRHVVNAYAVGRIADEEGLFRFQLDDKG
                     KWGNPQLLVKKVRHMKVRYIYVSGCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVEVL
                     LSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2269..2865
                     /locus_tag="WGN93_001830"
     CDS             2269..2865
                     /locus_tag="WGN93_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ0227695.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCAKGLCTAVNVRT
                     NNTGNEEAFDNIVVQDNPTVEAVKRSCPANSTDLCIDKKGMKYKKGTRSVSEMPRYII
                     EYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2870..3343
                     /locus_tag="WGN93_001831"
     CDS             2870..3343
                     /locus_tag="WGN93_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ0227696.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNTVKQFILKNPLDDNQTIKSKLEIFVSGYKMNPKIAKKYSVSVKFVDKEKSRA
                     YRLVGVPKAGTGYTLSAWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK"
BASE COUNT          957 a          684 c          862 g          889 t
ORIGIN      
        1 aatttaatcc acgatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacggtca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggcttttggc gataagaatg gcaataagac atatgacggc
      361 gatgcggcgg atgttttcct ccgcagcgtg gtgttgaatg ataccgacga cagccggatt
      421 aattatgcct tcaaccatat cgctttcggt tcgtctcagc cgaccgccga ccgtgtagtt
      481 tggacattca atcaaaacgg gacgttcggt tatacgaaag accagcatct tacaagcaaa
      541 tccagctttt tttattccga cggttatatc caaatcgtgc tgacagatgc gagagcagtt
      601 tcagatgccg ataagaaatt ccgttcggcg gtggttttga ttgacagcag cggcagggtt
      661 gaggtttgtc ctagaaacaa taggcgtacc gtatgccaat ataaatgatt gttttagtcg
      721 gtttgggaaa taaaaaaatg aagaataatg attgcttccg cctgaaaaac ccccagtccg
      781 gtatggcgct gatagaagtc ttggtcgcta tgctcgttct gaccatcggt attttggcac
      841 tattgtctgt tcagttgcgg acagtcgctt ccgtcaggga ggcagagaca caaaccatcg
      901 tcagccaaat cacgcaaaac ctgatggaag gaatgttgat gaatccgacc attgattcgg
      961 acagcaacaa gaaaaactat aatctttaca tgggaaacca tcatacacta tcagttgtgg
     1021 atggcgattt tcaggttgat gccataaaaa ctaagacgca gttggcagag gcacaattga
     1081 agagatttag ttatgagctg aaaaatgcct tgccggatgc ggcagccatc tattacgcca
     1141 tctgcaagga ttcgtcgggt gttgcgccga cattgtccgc cggcagtact ttttcttcaa
     1201 attgcgatgc tagtgcaaat ggggatactt tgattaaagt attgtgggta aatgattcgg
     1261 caggggattc ggatatcgcc cgtacgaatc ttgagacgaa cggcaacaat atcgtatata
     1321 cctatcaggc aagggtcgga ggtcgggaat gagacgtaaa atgctaaacg taccaaaagg
     1381 cagttatgat ggtatgaagg gttttaccat tattgaattt ttggttgcgg gcatgctcag
     1441 tatgattgtc ctgatggcgg tcggatcgag ttacttcaca tcccggaaat taaatgatgc
     1501 ggcaaacgag cgtctttccg cgcaacagga tttgcggaat gcggcaacat tgattgtccg
     1561 cgatgcgaga atggcgggcg gcttcggttg tttcaatatg tccgagcatc ttgcaactga
     1621 tgttgtttcc gatgtggcgc aaaaaaaccg tcttttttcc ttaaaaagga acagtacaaa
     1681 taaacttatc cccataacgg aatcttcaaa tatcaattat cagaattttt tccaggttgg
     1741 tagcgcattg atttttcaat acggaatcga tgatgttaat gcaagcgccg cgactaccgt
     1801 cgtcagcagc tgtgccgcaa tattgaaacc gggcaagcaa atccttactt tagaaaatgt
     1861 aaaaaaagaa ttgaatattc cggatacgga taacaggcaa aatggcaata ttgcgcgtca
     1921 aaggcatgtg gtcaatgcct atgcggtcgg caggattgcc gatgaggaag gtttgttccg
     1981 cttccaattg gatgataagg gcaagtgggg taatcctcag ttgctcgtga aaaaggttag
     2041 acatatgaaa gtgcggtata tctatgtttc cggctgtcct gaagatgacg atgccggcaa
     2101 agaggaaaca ttcaaatata cggataaatt cgacagctcc acaaatgctg ttacgcccgc
     2161 cggggtggag gttttattga gtagcggtac tgataccaag attgccgctt cttcagacaa
     2221 tcatatttat gcttaccgta tcgatgcgac aatacgcggg ggaaatgtat gcgcaaacag
     2281 aacactttga cgggaatccc gacttctgac ggacagaggg ggttcgcgct gtttatcgta
     2341 ctgatggtga tgatcgtcgt ggcttttttg gttgtaactg ccgcgcagtc ttacaatacc
     2401 gagcagcgga tcagtgccaa cgaatcagac aggaaattgg ctttgtcttt ggccgaggcg
     2461 gctttgcggg aaggcgaact tcaggttttg gatttggaat atgatacgga cagtaaggtt
     2521 acatttagcg aaaactgtgc aaaaggtctg tgtaccgcag tgaatgtgcg gacaaataat
     2581 actggtaatg aagaggcttt tgacaatatc gtggtgcaag acaatcccac cgttgaggcg
     2641 gtgaagcgtt cttgccctgc aaattctacc gacctgtgca ttgacaagaa agggatgaaa
     2701 tataagaaag gcacgagaag cgtcagcgaa atgccacgtt atattatcga atatttgggc
     2761 gtgaagaacg gagaaaatgt ttatcgggtt actgccaagg cttggggtaa gaatgccaat
     2821 accgtggtcg tccttcaatc ttatgtaagc aataatgatg agtaataaaa tggaacaaaa
     2881 agggtttaca ttgattgaga tgatgatagt cgtcgcgata ctcggcatca tcagcgtcat
     2941 tgccatacct tcttatcaaa gttatattga aaaaggctat cagtcccagc tttatacgga
     3001 gatggtcggt atcaacaata ctgtcaaaca gtttattttg aaaaatcccc tggacgataa
     3061 tcagaccatc aagagcaaac tggaaatatt tgtctcaggc tataagatga atccgaaaat
     3121 tgccaaaaaa tatagtgttt cggtaaagtt tgtcgataag gaaaaatcaa gggcatacag
     3181 gttggtcggc gttccgaagg cggggacggg ttatactttg tcggcatgga tgaacagcgt
     3241 gggcgacgga tacaaatgcc gtgatgccgc ttctgcccga gcctattcgg agactttgtc
     3301 cgcggatgcc ggctgtgaag ctttctctaa tcgtaaaaaa tagggctgtt ttgccaatgc
     3361 cgtctgaaaa tcaatgttca gacggcattt tt
//
LOCUS       DAWEYF010000175         3371 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.175, whole genome shotgun sequence.
ACCESSION   DAWEYF010000175 DAWEYF010000000
VERSION     DAWEYF010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.175"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(198..578)
                     /locus_tag="WGN93_001832"
     CDS             complement(198..578)
                     /locus_tag="WGN93_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ0227697.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPSVQNQARPADF
                     REFSCENGLSVRVRHLDSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            1054..3135
                     /locus_tag="WGN93_001833"
     CDS             1054..3135
                     /locus_tag="WGN93_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ0227698.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            3125..3319
                     /locus_tag="WGN93_001834"
     CDS             3125..3319
                     /locus_tag="WGN93_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ0227699.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
BASE COUNT          739 a          997 c          861 g          774 t
ORIGIN      
        1 cattggataa cagccctgaa gaaatcggag caggtttaaa gttggcattg agccgctgcc
       61 gataggataa acccggaacg aaacgaaaaa taatccgcca cgcccgaaaa ccgccgaaac
      121 cagccgacag ccaaaacaaa tccgacacaa aaaaccgccc gaaaaatccg gacggcggtt
      181 caaacaggct gccccgttta gcgggcgcgg caggaagttt cgaccgaatt gccgtaggca
      241 tcggtaaagc cgaaaaaggc ttcgccgcct ttctggtgcc actcggttgc gtttccgaac
      301 aaaccgtgtt cggcggtata gcgttcgccg gatgcggcaa cgtcggaaga gaggacggca
      361 cgcctgccgt ccagccgcaa cgcgactttg ccgctgtcca aatggcggac gcgcacagac
      421 aaaccgttct cgcatgaaaa ctcccgaaaa tctgccgggc gggcttggtt ttgaacggac
      481 ggcatatgcc cgcgtccgcc gtcatcatac gcctccggca cggcacaggc cgccaaagac
      541 aaaaccggta cggtcagcgc gaaaaacctg atattcataa aagctcccca ataaaaataa
      601 gatatgaaac aaccgccctg attccaagct gcggcaacgc catactataa acggacgcgc
      661 aaacacacaa gcccgataac cggaatttac ccgcgatgaa tcaataatcc ggattgcgcg
      721 ccccttcttt acccgtcttc cggcgccgcc ttttgcctga cgatgccgtc caaacccgcc
      781 tgtccgcccg aaggaatgta aattttttcc aaattccaag taaaaaccgc tatcagtgtg
      841 ctaatttgcg ttaaaatcct attcggcgtt taacgttttg tgcgcccgca tccctgcact
      901 gtttgatgcg ggcataaggc acaaatcccg acaagcgcac tgtttcatac ttcgtcaatc
      961 attcagactc cggtttgtgc ccgtgccggc aggcggtcat ccgtttcccg ccgttcaggc
     1021 atattccgac agtgtgagat aaggatttat tcgatgaaat cactcaaaac cttcctcatt
     1081 tggggcatag tggtactggt cggcttagca tcctttacca ctctggctct cagccgaggc
     1141 gaacaggtca gcgcggtatg gatggttacc gccgccatat ccgtttactg catcgcctac
     1201 cgtttttaca gcctctacat cgccaaccgc gtaatgcggc tcgatcctaa ccgcctgact
     1261 ccggcagaac gccacaacga cggcttggac tacgttccga cgcacaaagg cgtattgttc
     1321 ggacaccact ttgccgcgat tgcgggcgcg ggccctttgg tcggcccggt tttggcggcg
     1381 caaatgggtt acctgcccgg tactttgtgg attatcttcg gcgtggtgtt tgccggcgcg
     1441 gtacaggata tgatggtctt gttcgtctct atgcgccgcg acggtaagtc tttgggcgat
     1501 attgtgaaac aggaactcgg cactgtcccc ggcgtgattg cctccatcgg tattttgatg
     1561 attatggtca tcattatggc ggtgttggcg ttgattgtcg taaaagcact ggttcacagc
     1621 ccttggggta cgtttaccat cgccgccact atgccgattg ccctgtttat gggtatttac
     1681 acgcgctata tccgtccggg caaaatcggc gagatttcca tcgtcggctt tattttgctg
     1741 atgctggcgg taatttacgg cgaagatgtg gcgaaaagtt ccatcggaca ttggttcgac
     1801 cttgacggca tccagctcac ttgggcgatt atgatttacg gctttgtcgc ctccgtattg
     1861 cccgtatggt tgctgctcac tccgcgcgac tatctctcca ccttcctgaa aatcggtacg
     1921 attgcggcct tggctttggg catcgtcatc gtcaatccca ctttgcaaat gcctgccgta
     1981 acccacttta tcgacggttc gggtccggta ttctcaggcg cattgttccc gttcctcttc
     2041 atcaccatcg cctgcggtgc ggtttcgggc ttccacgcgc tgatttcctc cggcaccacg
     2101 ccgaaaatgc tggaaaacga aacccacgtc cgtatgattg gttacggcgg tatgttgatg
     2161 gaaagtttcg tagccattat ggcgcttgcc gccgccgcat cgcttgatcc cggcgtgtac
     2221 ttcgccatga acagccctgc cgccctgatc ggtacggatg ccaacaccgc cgccgaagtg
     2281 attaccacca agctgcaatt ccctgtcgat gcggcaaccc tgttgcatac cgctaaggaa
     2341 gtgggcgaaa acaccatcct ttcccgtgca ggcggtgcgc caaccctcgc agtcggtatg
     2401 gcgcacatta tgagccgcct gattccgggc gaggcgatga tggcgttctg gtatcacttc
     2461 gccctattgt ttgaagcctt gttcatcctg accgccgtcg atgccggtac gcgcgtcgca
     2521 cgttttatga ttcaagactt gggcagcatc ttctacaaac ctttcggcaa caccgactcc
     2581 atccccgcca acctgattgc gaccttcttc gccgtggcat tgtggggcta cttcctctac
     2641 accggcgtaa ccgacccgct gggcggcatc aactcgctct ggcctttgtt cggcatcgcc
     2701 aaccaaatgc tggcaggcgt ggccttgatt atgtgcgccg tggtgctgat taagatgaaa
     2761 cgcgaccgtt atgtttgggt ggtactcgtt cccgccgtcg gcgtactgtt cgtaacctgc
     2821 tacgccggcc tgcaaaaact gttccacagc gacccgcgca tcagcttcct tgcccacgcc
     2881 ggcaaataca gcgacgcatt ggctaaaaac gaagtccttg cgcctgccaa agacatcggc
     2941 gaaatggcgc aaatcatctt caacgacaag attaatgccg gtctgaccat cctcttcttg
     3001 tcggttgtcg tgattgtcgc cgcgtacggt ttgcgtaccg ccctcaaagc acgcaaagtc
     3061 ggctggccga ccgccaaaga aatcccggcg gtgtaccgcg acggcaagca gccggaggca
     3121 caaagtgaag cataagctcg cgtcttggtg gaaaaccatc aagctgacgg caaacttgat
     3181 ggcaggcgtg cctgattatg aaaactacgt tgcacagcag cgcaaacata atcccaacgc
     3241 ccccgtgatg accaagctgc aatttcaaga ctactgccgc aagcgccgtt gcggcgcaaa
     3301 cggcggacgc tgctgttaag cctgcttgaa acaaattccg tctgaacgcc gcttcagacg
     3361 gaattattat a
//
LOCUS       DAWEYF010000176         3286 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.176, whole genome shotgun sequence.
ACCESSION   DAWEYF010000176 DAWEYF010000000
VERSION     DAWEYF010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.176"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(461..613)
                     /locus_tag="WGN93_001835"
     CDS             complement(461..613)
                     /locus_tag="WGN93_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227700.1"
                     /translation="MRFVVLASFSGRSCNESVIGFDVSLRLTALSLTLSHRERGRVAV
                     ASLFAA"
     gene            644..967
                     /locus_tag="WGN93_001836"
     CDS             644..967
                     /locus_tag="WGN93_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ0227701.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            1081..3258
                     /locus_tag="WGN93_001837"
     CDS             1081..3258
                     /locus_tag="WGN93_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ0227702.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT          803 a         1128 c          833 g          522 t
ORIGIN      
        1 cccctctccc tgtgggagag ggttagggag agggcagtaa gccgtaggct tacatcaaag
       61 tcgataacgc tttcacaaag cctgtgtgca ctgaaaactg aaaggtcatc tgaaaacgga
      121 gctttcgaag gaagcagagt ttctgcgaag ctaaaaccga agctgcaaaa aatcgaaaag
      181 cagcctgcac gttgaaaatg ccgcccaagc aaacctgcgg tttgccgccc tctccctagc
      241 cctctcccac agggagaggg gattgggttg caggctgcct ttaaggttta ggcaaatttt
      301 taacttcgtt gaagctgcga tttcagaagc tccgttttag cttcgcagac actccgcttc
      361 cttcgaaagc tccgttttca gacgaccttt tggaacacca caggcacacg catcgaacgg
      421 ctgaatcaaa gttcagaccg atggcagccc gcacccgagt ttatgcggca aacagcgagg
      481 ctacggcaac ccgccccctc tccctgtggg agagggttag ggagagggcg gtaagccgca
      541 ggcttacatc aaagccgata acgctttcgt tacaactccg cccactgaac gaagccaaaa
      601 cgacaaaccg catcgtaaac cacccaaccc ataggagaac cccatgcaaa acgaaaccat
      661 caacctgaaa cagcaccttg ccgccatcaa agaatactgg cagcccgaaa tcatcaaccg
      721 ccacgggttc caattccgtt tggtcaaact tttgggcgat tacggctggc atacgcacgg
      781 atacagcgac aaagtgctgt ttgccgtgga gggcgacatg gcggtggact tcgccgacgg
      841 cggcagcatg acgatacgcg agggcgagat ggcggtcgtg ccgaagtcgg tgtcgcaccg
      901 cccgcgttcg gaaaacggct gctcgttggt gctgattgag ttgtccgacc cgtccgaggc
      961 cgtctgaaaa cgaagtttcc gaaggaagct gagtttctgc gaagctaaaa gcagcctgca
     1021 ccttcaatca atatgccgaa aatacaaccc caccgcacac caacacacaa aggaaatccc
     1081 atgacacgct tcaaatattc cctgctgttt gccgccctgt tgcccgtgta cgcgcaggcc
     1141 gatgtttctg tttcagacga ccccaaaccg caggaaagca ctgaattgcc gaccatcacc
     1201 gttaccgccg accgcaccgc gagttccaac gacggctaca ctgtttccgg cacgcacacc
     1261 ccgctcgggc tgcccatgac cctgcgcgaa atcccgcaga gcgtcagcgt catcacatcg
     1321 caacaaatgc gcgaccaaaa catcaaaacg ctcgaccgcg ccctgttgca ggcgaccggc
     1381 accagccgcc agatttacgg ctccgaccgc gcgggctaca actacctgtt cgcgcgcggc
     1441 agccgcatcg ccaactacca aatcaacggc atccccgttg ccgacgcgct ggccgatacg
     1501 ggcaatgcca acaccgccgc ctatgagcgc gtagaagtcg tgcgcggcgt ggcggggctg
     1561 ctggacggca cgggcgagcc ttccgccacc gtcaatctgg tgcgcaaacg accgacccgc
     1621 aagccattgt ttgaagtccg cgccgaagcg ggcaaccgca aacatttcgg gctgggcgcg
     1681 gacgtatcgg gcagcctgaa caccgaaggc acgctgcgcg gccgcctggt ttccaccttc
     1741 ggacgcggcg actcgtggcg gcagcgcgaa cgcagccgcg atgccgaact ctacggcatt
     1801 ttggaatacg acatcgcacc gcaaacccgc gtccacgcag gcatggacta ccagcaggcg
     1861 aaagaaaccg ccgacgcgcc gctcagctac gccgtgtacg acagccaagg ttatgccacc
     1921 gccttcggcc cgaaagacaa ccccgccaca aattgggcga acagccgcca ccgtgcgctc
     1981 aacctgttcg ccggcatcga acaccgcttc aaccaagact ggaaactcaa agccgaatac
     2041 gactacaccc gcagccgctt ccgccagccc tacggcgtag caggcgtgct ttccatcgac
     2101 cacaacaccg ccgccaccga cctgattccc ggttattggc acgccgaccc gcgcacccac
     2161 agcgccagcg tgtcattgat cggcaaatac cgcctgttcg gccgcgaaca cgatttaatc
     2221 gcgggtatca acggttacaa atacgccagc aacaaatacg gcgaacgcag catcatcccc
     2281 aacgccattc ccaacgccta cgaattttcc cgcacgggtg cctacccgca gcctgcatcg
     2341 tttgcccaaa ccatcccgca atacggcacc aggcggcaaa tcggcggcta tctcgccacc
     2401 cgtttccgcg ccgccgacaa cctttcgctg atactcggcg gcagatacag ccgttaccgc
     2461 accggcagct acgacagccg cacacaaggc atgacctatg tgtccgccaa ccgtttcacc
     2521 ccctacacag gcatcgtgtt cgacctgacc ggcaacctgt ctctttacgg ctcgtacagc
     2581 agcctgttcg tcccgcaatc gcaaaaagac gaacacggca gctacctgaa acccgtaacc
     2641 ggcaacaatc tggaagccgg catcaaaggc gaatggcttg aaggccgtct gaacgcatcc
     2701 gccgccgtgt accgcgcccg taaaaacaac ctcgccaccg cagcaggacg cgacccgagc
     2761 ggcaacacct actaccgcgc cgccaaccaa gccaaaaccc acggctggga aatcgaagtc
     2821 ggcggccgca tcacgcccga atggcagata caggcaggtt acagccaaag caaaacccgc
     2881 gaccaagacg gcagccgcct gaaccccgac agcgtacccg aacgcagctt caaactcttc
     2941 actgcctacc actttgcccc cgaagccccc agcggctgga ccatcggcgc aggcgtgcgc
     3001 tggcagagcg aaacccacac cgaccctgcc acgctccgca tccccaaccc cgccgccaaa
     3061 gcccgcgccg ccgacaacag ccgccaaaaa gcctacgccg tcgccgacat catggcgcgt
     3121 taccgcttca atccgcgcgc cgaactgtcg ctgaacgtgg acaatctgtt caacaaacac
     3181 taccgcaccc agcccgaccg ccacagctac ggcgcactgc ggacagtgaa cgcggcgttt
     3241 acctatcggt ttaaataagg tcgtctgaaa acggagtttc tgcgaa
//
LOCUS       DAWEYF010000177         3274 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.177, whole genome shotgun sequence.
ACCESSION   DAWEYF010000177 DAWEYF010000000
VERSION     DAWEYF010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.177"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(66..2237)
                     /locus_tag="WGN93_001838"
     CDS             complement(66..2237)
                     /locus_tag="WGN93_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0227703.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNAKAVLDTITVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKEYEAGKGFRNFNGGKT
                     VPYSALDKRSYLAKIGTSFGDGDHRIVLSHMKDQHRGIRTVREEFTVGDASSRTNITR
                     QAPSYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVVGPNH
                     TRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNGEFEISGKKKDPKDPKKE
                     IDKTDEEKAKDKKDMDLVHSYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVK
                     THDGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIAD
                     GTKAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYIK
                     NHGYELGASYRTGGLTAKVGVSHSKPRFYDTHPKKLLSANPEFGAQVGRTWTASLAYR
                     FQNPNLEIGWRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDVFANWKPLGKDT
                     LNVNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          727 a          759 c          923 g          865 t
ORIGIN      
        1 atcaaattat cagaacagat gccgtctgaa aggctttcag acggcatttt ttcgggatgt
       61 gcgttttaga acttgtagtt cacgcccaag cgtacatcgc ggcccacgcc cggcagggta
      121 ttggtccagc gttggctgtg cggatagtag aacgtgttga acacgttgtt aaccgaaaga
      181 ttaacattga gcgtgtcttt gcccagcggt ttccagttgg cgaagacatc gttcacaccg
      241 aaacctttgc gtacaacgtt ttccaatttg ccgttgcggt ctttttgacc tgccaccaat
      301 atcgaaccca cggctttttg aacataacgg ccgcgccagc cgatttccag attcgggttt
      361 tggaagcggt aggcaaggga agccgtccaa gtgcggccga cttgtgcgcc aaattcagga
      421 ttcgcgctca acagtttttt aggatgggta tcgtaaaagc gcggtttgct gtggcttacg
      481 ccgactttgg cagtcaggcc gccggtgcgg taggacgcgc ccaattcgta accgtggttt
      541 ttgatgtaac cggcattgac ggcttcacgg acggcggcag agacgtggcg gttttgcgga
      601 ttggcaagcg cgtctttgat ggtctgccag aagtagctgc cgttggcggc aaacgtgccg
      661 tcgttgtagt tgaagccgat ttcggtattg cgcgcgcgtt cggctttggt gccgtcggca
      721 atcgagatga tgccgcgttt gccgtgggtt tgcagcgcgt catacaggcg cgggctgcgg
      781 ctggcgtagt tgtggcttgc gctgaagctc cagtgttcgt gcggctgcca aatcacgccg
      841 aaactcgggt taaggttgct gcttgaaacg gttttgccgt cgtgggtttt caccttgaag
      901 cggtcgtaac gcagcccgcc ggtcagggta aagccgtcaa tctcgtgaat ggcttcgata
      961 tacgcgccgg tatcggtttt ggtcgggttg gacagtttgt aggaatggac aagatccata
     1021 tctttcttgt ctttcgcttt ttcttcatcg gtcttatcta tttctttttt gggatctttc
     1081 ggatctttct tcttaccgga gatctcaaat tcgccgttca aaaacgcttg cggtttgatt
     1141 tcctgatggc ggtagttgat accgtatttc aacagggttt gttcggcaag gcggctgtca
     1201 aagttgaagt tcataccccg agtggtgatt cgggtgtggt tagggccgac cacattgcct
     1261 gcgtagccgt tatctttgtc atcggcggaa tagcgtttct tttccaacac ataggcgttg
     1321 gcatccagtt tttcgacaaa gcccaaatct ttgccggtgt acgccaagtt ggtgttggat
     1381 tgtgtggttt cgcggtagga tggggcttgg cgtgtaatat ttgtccgtga acttgcgtcg
     1441 ccaacggtaa attcttcacg gacggtacgg atgcctcggt gctggtcttt catgtggctc
     1501 aatacgatgc ggtggtcgcc gtcgccgaag cttgttccga ttttggccag gtagctgcgt
     1561 ttgtccagtg cgctgtacgg tacggttttg ccgccgttga aattacggaa gcctttgccg
     1621 gcttcatatt ctttttcatc gttgcggttg taagagaaca aaccgtcgaa gttgccctct
     1681 tttccgaata cgctggcgcc gtagcttacg ccttcgttgc tggcaaagcc gctgttgagg
     1741 cgcacgcccc agtttttatc caagcctttg agcaggtctt gggcatcgac ggttttggcg
     1801 ataatcgcgc cgttggttgc gccgataccg gcagaggcag aacccgcgcc tttttgtacg
     1861 gaaacgactt taaccaaagc gggatcgaca ataaatctgc cttggtggta aaggatttgg
     1921 ctgtcggaat aggcgttgtc caccttgatg tcgacagagt tctgacccat gccgcgcagc
     1981 gtcaggaatt gggacgtgcc gttgccgccg ccgaaatcga tggacggctc ttcttttaag
     2041 agttcgcgca tatcggttgc ggtgctttcg tctttttgtt gaagcgtaac gatgttggta
     2101 cggattttgc tgccttggcg gtcgcctttt acggtaatgg tatccagtac ggccttggca
     2161 ttattttctg ccgcgtgggc aaaacctgcc gccagggtaa gcgagagcag gctgaggcgg
     2221 aaaaacgggg cgttcatttg ttcgtccttt tgagtgtatg aagggaagta aatccaaacc
     2281 gttaaggttt ggcaggataa gaaaaataat aattattttt gtttatatta acgagagggg
     2341 ggatttgtgt aaagctgatt atcgttttta tttgcgaagt gttgtttttt gttgacaggt
     2401 tttgtcggaa atgtatagtg gactaacaaa aatcaggata aggcgacgaa gccgcagaca
     2461 gtacagatag tacggcaagg cgaggcaacg ctgtactggt ttttgttagt ccactataaa
     2521 aaacggcgga aatatagtgg attaacaaat gcgggaatga cgaaaagcaa cctttccgcg
     2581 tccttcccgc gaaagcggga atctagaacc cctaacgcgg caggaatcta tcggaaaaaa
     2641 ccgaaaccga acgaacctag attcccgcct gcgcgggaat gacgaggcct gcgcgggaat
     2701 gacgaaaagc aacctttccg cgtccttccc gcgaaagcgg gaatctagaa cccctaacgg
     2761 gcaggaatct atcggaaaaa accgaaaccg aacagactgg attcccgcct gcgcgggaat
     2821 gacgaagcct gcgcgggaat gacgaaaagc aacctttccg cgtccttccc gcgaaagcgg
     2881 gaatctagga actcaaagct gcaagaattt atcagaaaca actggaactc aaaaaaacta
     2941 gattcccgcc tgcgcgggaa tgacgaaggg ttaaagaaat gatgagaaac ggcggtaatt
     3001 tatcgggaat aaccgaaaac gaacggaaat caggacaagg cggcgaagcc gcagacagta
     3061 cggataggac ggaaccgatt cacttggtgc ttgagcacct tagagaatcg ttctctttga
     3121 gctaaggcga ggcaacgacg tactggtttt tgttcatcca ctataacagc aaccctgtcg
     3181 ccgtcattcc cgcgaaagcg ggaatccagt ccgttcagtt tcggtcattt ccgataaatt
     3241 cctgctgctt ttcatttcta gattcccact tttg
//
LOCUS       DAWEYF010000178         3179 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.178, whole genome shotgun sequence.
ACCESSION   DAWEYF010000178 DAWEYF010000000
VERSION     DAWEYF010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3179
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.178"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(237..1094)
                     /locus_tag="WGN93_001839"
     CDS             complement(237..1094)
                     /locus_tag="WGN93_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ0227704.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADSAPLTDYLARRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGDTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(1156..1971)
                     /locus_tag="WGN93_001840"
     CDS             complement(1156..1971)
                     /locus_tag="WGN93_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ0227705.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            2035..2205
                     /locus_tag="WGN93_001841"
     CDS             2035..2205
                     /locus_tag="WGN93_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227706.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            2215..3000
                     /locus_tag="WGN93_001842"
     CDS             2215..3000
                     /locus_tag="WGN93_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ0227707.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLSKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDAWLESGDIVAANPKVLAQMLKIISAHV"
BASE COUNT          708 a          783 c          905 g          783 t
ORIGIN      
        1 gcacttgaaa tccgaatcca agttattctt cattgtattc tacctggggt cgtagttatt
       61 aaattaccat acttatttgt ttggatcgtc ataatattag ttggcatgtt gttgttatat
      121 ttatcatatc caatatcctt attaactcgg atgactcttt cataaattgt atgggaaatg
      181 agatttccat cactaagcct ctcaatagat atacgcgtta atgttgggaa agggtttcag
      241 acggccttca taatgcgttc gatttcgtgc caaaagccgt ccggccgaca ttccaaaacg
      301 gcaatcaagc cttggtcgat acggcggatt tcggttgcgt tcaatgtttc ggtttcggcg
      361 acacgcgcag gcgcgaggta ggccatacgg tcgagcagat ggtagcggac ttcttggcgt
      421 ttaaacccgt attccgccca atcttgaata tagatgccgc gccaaccgta tggattaagc
      481 ggtggctcaa aagcatggaa accgtgtgga aaaaatccga tgccgcgcac gatggaaacg
      541 ggttttacgt caagcggcag accgtgttgc cgcaaggttc ggatgccgtc tgaagtgtgc
      601 ggcagaccga gttgggcggt cagtttggcg gcttttccca acagcgtgtc tttggggtcg
      661 agtccgcgca tgtcttcgag cctgcccgtg tcgccgccgt aatatttgca ggtcagctcg
      721 atatggtagg gcttgccgtt aagccttacc acaaaatccg ccgcgccttg cgtattgccg
      781 tccgaaccgg aaaccgtgag gttgtgcgcg agcagttcgg cgtgtggcgc gttggcaaac
      841 caaaatgcca gcagttcttc ggcgtaaatg cccaagcggt gtccgaacgg ggcgcgtcgg
      901 gcgaggtaat ccgtcagcgg agcggaatcg gcatccaatg ccaaaagata gcggaaaccg
      961 cgttccccca atagttcgcg cacgcccaat tcgcaaccgc tttgccacaa aggcggcgca
     1021 gtcagcagcg aggcgaggtc gcggacgggt tggctggtga gcttccacca taatgcgtct
     1081 agggcgtaat tcatgcttat ccgaatatca gtcatgccgt ctgaaaagct ggaaatgttt
     1141 tcagacggcc ttaaatcagt cttttttatg gatgcgatgg ctgacggtat tgaaaaaacc
     1201 gcgcaggatg tcgatgtctt cggtttgcgt gttggcgcgt ccgaacaggc tctgcatacg
     1261 gcgcatcaga cgctcgccgt tgcggcggtt gaaaaagccg atgtcgttca tcacgctttc
     1321 catgtgggcg accatgcctt tgatttgctc gtgggtcgca gcgtggtctt cttgttgaag
     1381 atgggtcatg ggcgaaccgg tttggctgaa gatttcgtag cacacgacct gcacggcttg
     1441 ggcgaggttg agcgagaaat agtcgggatt gccgttgatg gtcatcagtc ggttgcaggc
     1501 ttggacttct tcgatgctca agccgaaagt ctcgttgccg aaaaccagtg ccactttctc
     1561 gcctcggttt gcggtctgca gtaattcgga taccaaatcg cgcggggttt gcagcggcgc
     1621 agtaatttcg cggcggcggc tggtcagggc gcaggcgatg gtggtgtcgg caagggcttc
     1681 gtccaaagaa gcggcaatgg tggcattttc caaaacgtct gccgcgccgg aagcgaggat
     1741 gaagctttct tccggtaatt taaacgattg aggatgctcc gggtcaaaca cgggcgggtt
     1801 ttccgtcatc ggcgttgcca tcagatttgg ggcgacgatg gtcagtttgt gcagacccat
     1861 tgttttcatc gcgcgcgcgg cagagccgat gttggcggga tggctggtgc gcgtgaggat
     1921 gatgcggatg ttgtccagat aagcgggcag ggcgggtttg agagtagtca tgttcggttt
     1981 tcggtcggaa tggaataggg tataatgcgc cgtctttttc gttcggacgg taaaatgccg
     2041 tctgaaatgt tctttaacaa cgtcggaaat ttaacgttgc gcctgaagca gacacgcgtc
     2101 gggcggtatt ttacccgatt tggcaggatt taccccaacc aaataaactc cgattttgcc
     2161 gctccgaagg actgcgcgtc cgaaccggcg gtatgccacc cttaaggaaa tctgatgaat
     2221 ccgtttttga atacagcctt taaagccgcc cgccgtgccg gtcagatgat gatacgcgcc
     2281 gcaggtaacc tcgatgccgt caaaaccgac agcaaagcct tcaacgattt tgtttccgat
     2341 gttgaccgca attccgaaat catcctggtt gaggctttga aagaagccta tccgcaccac
     2401 aaaatcactt gtgaagaaag cggctcccac ggcaaagccg cagccgagta cgaatggatt
     2461 atcgatccgc tcgacggcac gaccaatttc cttcacggtc atccccaata cgccatctct
     2521 atggcgctcc tgcacaaagg cgtgttgcaa gaagctttgg tttacgcccc cgaacgcaac
     2581 gacgtatata tggcttcgcg cggcaaaggc gcgttgctca acgaccgccg catccgcgtt
     2641 tccaaccgca tcgaattgaa ccgctgcctg atcggtaccg gcttccctgt tgtcgatcaa
     2701 agcatgatgg acaagtatct ggcgattttg aaagatttct tgtcaaaaac cgccggcggc
     2761 cgtcgtgaag gcgcggcttc tttggatttg tgtgctgtag caacaggtcg ttttgacggc
     2821 tttttcgagt ttaacctcaa accgtgggac attgccgcag gtgcattgat tgttcaggaa
     2881 gcgggcggta tcgtaaccga tatgacgggt gaggacgctt ggttggaaag cggcgatatt
     2941 gtcgccgcca atcccaaagt attggcgcag atgctgaaaa tcatttccgc acacgtttaa
     3001 atttcagccc tttcccgaaa atatgggaaa acgggcgggt atgccgtctg aagtatcgcg
     3061 ccgatatttc agacggcatt tttattggca acgcggcagg acggcggaaa cggtcaaatg
     3121 ccccaaactg ccgaggatgg aaacccatat ctgattaaac ggagaaccct gtgcgattt
//
LOCUS       DAWEYF010000179         3170 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.179, whole genome shotgun sequence.
ACCESSION   DAWEYF010000179 DAWEYF010000000
VERSION     DAWEYF010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.179"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(57..1157)
                     /locus_tag="WGN93_001843"
     CDS             complement(57..1157)
                     /locus_tag="WGN93_001843"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ0227708.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPGR
                     LRRKLLDLQDTGADELHRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHSYSVQLADLPLLAERTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRVVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGEKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADARQMYICGGGIRNPVLMADLAKCFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            1482..3056
                     /locus_tag="WGN93_001844"
     CDS             1482..3056
                     /locus_tag="WGN93_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ0227709.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
BASE COUNT          655 a          795 c          924 g          796 t
ORIGIN      
        1 aaagaggaaa aaatgccgtc tgagcggcgg aacgggcttt cagacggcat ttgcgctcaa
       61 taataatatc ccgcgcccag aatacacggt ttggatgcgc cggttgcttt gtgcggacta
      121 ccggggatgc gattaatcca acacgccgcc aaccacgcaa atgcggcggc ttctacccat
      181 tgcggatcga ggttcagttc ggcggtgctg tgcagggaaa cgcgtgtgcc gaagcatttt
      241 gccaaatccg ccattaaaac aggattgcgg atgccgccgc cgcaaatgta catttgacgg
      301 gcatctgccg ctgcgtgtga gacggcgtcg aaaacggttt gcgcggtaaa acgggaaagc
      361 gtccgtaata cgtcgtatcg gttttcgccg ccgtcaaggt aggtttcgag ccaatttagg
      421 gcaaacagtt cgcgccccgt gcttttgggg tggggttgtg cgaaatatgg gtgggcgagc
      481 agcctgtcga gcagttgcgg caatatgttg ccttgtgccg ctttttcacc gtttttgtcg
      541 taaggaagct gccagtgtgc ctgcgtccac gcgtccatca gcatattgcc cggccctgtg
      601 tcgaagccga aggcgggtgc gtcggggggg agtacgctga tgttggcaat cccgccgatg
      661 ttcagtacca cgcgtgtttc tttgtcatcg cggaacaggg ctttgtgaaa ggcggggacg
      721 agcggcgcac cttgtccgcc ggccgcaagg tcgcggctgc ggaagtcgcc gacggtaaaa
      781 atctgagtcc gttccgccag cagcggcaaa tcggcaagct gtacgctgta actgtgttcc
      841 ggcgcgtgtc tgacggtttg cccgtggcag ccgagggcgg taatgtcgga cggcgcgagg
      901 ttttgactgc acagcagttc ggcggcggtt tgcgcgtaca ggcggctgag ttcttgcgac
      961 aacatcctgc tgcggtgcag ttcgtccgcg cctgtgtcct gcaaatccag caatttgcgg
     1021 cgtaacctgc cggggtaggg ggtaaaggcg tgcccttccg cgcccagcca tttgccgccg
     1081 tccatccgta ccagcacggc atccgcccca tccatactgg ttcccgacat gatgccgatg
     1141 taaagctgtg tttccatcat cactcccaaa ctggtgcaaa acgccatttt aacgtgtatt
     1201 gacgctcgta tactgatttg ccgccgcagt gtaaataaag tgtaaataaa tgtttcaaga
     1261 cggatggaaa aatattataa tgcgcccgca acatccagta gtagaagtgt catacaaacc
     1321 gtttccggca gcagttttgc attcggtcag gtttgggggt attcggatgc ggttcagaag
     1381 gaaggatgcg tctgccatat cccgaaacgg cagttcgacc ggaggcagca gtacagtgtc
     1441 ggcaacactc atgatttcca ccacattaaa ggaagattgc catggctcaa atccaaatga
     1501 gcgcaaatgt taaaaccatc aacgccgtct ttgccgccat gctggtaggt acagtcggct
     1561 attttattta ttggggcttg ggttataccc attacaatta cgccgcctta ttcattattg
     1621 ccacgatgtt cggcgtgttt atggcgttca acatcggcgg caacgatgtt gccaattctt
     1681 tcggcaccag cgtcggtgcg ggtacgctga ccatcccgca ggctttgctg attgcggcgg
     1741 tatttgaggt cagcggcgcg gtcatcgcgg gcggtgaggt aaccaatacc atacgcaaag
     1801 gcatcgtcga tttgaagggt gttgatttcg aacccataca gtttgtgttt attatgatgt
     1861 ccgcgctttt ggcggcggcg ttgtggctgt tgtttgcctc gaaaaaaggg cttccggtat
     1921 ctaccaccca ttccattatc ggcggcattg tcggcagcgc ggtatgtatg gcggtaatga
     1981 acgatgccgc atcgggcgat ttgatacgtt ggggcaagct gggcggtatt ggtgtttctt
     2041 gggtattgtc gcccgtgttg ggcggcgcgg tgtcctattt cctgttttcg cgcgtcaaga
     2101 aaaacgtctt agattacaac gcttgggcgg aaggcacgct caagggcatc aagcaggaaa
     2161 aaaaggccta taaagaacgg caccgcctgt ttttcgaggg tttgtccgaa gccgaaaaag
     2221 tcgagtacgc caccaaaatg gcgcacgacg cgcaaattta cgacgaaccc gaattcgatc
     2281 cgcaagagct gcaatcggag tattaccgcg gtctttatgc gttcgacaac cgtaaaaaca
     2341 atgtcgattc ctacaaagcg ctgcattctt ggattccctt tatcgcttcg ttcggcgcga
     2401 tgatgatttc cgctatgctg attttcaagg gcttgaaaaa cctgcatttg gggatgagca
     2461 acgtcaacag cttcctgacc atctttatga taggcgcggc ggtgtggatg gggacgtttg
     2521 tgtttgccaa aagcctcaag cgtaaagact tgggcaaatc gacctttcag atgttttcat
     2581 ggatgcaggt ctttaccgcc tgcggcttcg cattcagcca cggtgcgaac gatatcgcca
     2641 acgccatcgg tccgtttgcc gcgattatgg atgttttgcg taccaacagc gttgccgcgc
     2701 aaaatgtcgt ccccccgatt gcgatgctga ctttcggtat cgcgctgatt gtcggtttgt
     2761 ggtttgtcgg taaagaggtg attaaaaccg tcggtacgag tttggcggaa atgcatcctg
     2821 cttcgggttt taccgccgaa ctgtccgccg catccgtcgt gatgggcgcg tcgctgatgg
     2881 ggctgcccgt gtccagtacg catatcttgg tcggcgcggt actcggcatc ggtctggtca
     2941 accgcaatgc caactggaaa ctgatgaagc ccatcggttt ggcgtgggtc attaccctgc
     3001 ctgccgccgc cgtattgtcg gttgtctgct acttggtttt acaggcagta ttctgattgt
     3061 aaaatactga tgccgtctga acccgtgttc agacggcatt ttgttgatgg aatgtgcggg
     3121 cttgtgcctt atgcacaatc tgttctgtcg ggatatgccg tttggtatag
//
LOCUS       DAWEYF010000180         3170 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.180, whole genome shotgun sequence.
ACCESSION   DAWEYF010000180 DAWEYF010000000
VERSION     DAWEYF010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.180"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            72..497
                     /locus_tag="WGN93_001845"
                     /pseudo
     CDS             72..497
                     /locus_tag="WGN93_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            503..1732
                     /locus_tag="WGN93_001846"
                     /pseudo
     CDS             503..1732
                     /locus_tag="WGN93_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            1790..2410
                     /locus_tag="WGN93_001847"
     CDS             1790..2410
                     /locus_tag="WGN93_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ0227710.1"
                     /translation="MTTHHVELRNVTKRFGAQKAVNQVDLVLKAGESVGLAGYNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGLDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIIVD"
     gene            2499..2630
                     /locus_tag="WGN93_001848"
                     /pseudo
     CDS             2499..2630
                     /locus_tag="WGN93_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            2627..3121
                     /locus_tag="WGN93_001849"
     CDS             2627..3121
                     /locus_tag="WGN93_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ0227711.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTKWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVSFDDMPDT
                     YIFK"
BASE COUNT          800 a          834 c          820 g          716 t
ORIGIN      
        1 actatattat cccgtatgcg gattggtttt aagatttgta aatttaattt gcatcaaaaa
       61 atcgccgata gatgattcat ataatatcaa tattaaagag tatcggtata tcggggatag
      121 tcatgtcctg tttttcaatc aaacgtatgt ccgcgtttcg ggcgcggata acggcgtttt
      181 ttgccgcctt tgtctttttg acggcggcac tgcccgctta tgcggagcat ctgcctgatt
      241 ttctggcgaa aatacagcct tcggaaattt ttccgggtgc ggaccgttac ggcaagccgg
      301 aaggtaagcc tatggttgcc cgcgtttaca aaggcgatga gcagttgggc ttggtctata
      361 tcacgaccga tgcggtcaat acgcgcggtt attcgagcaa accgattgat acgctgatgg
      421 cgttggcaaa cgacggaacg atagccggag cgaaattgat tgatcaccat gagtcgatta
      481 tgctgatcgg tatcccgcat ttgcccgcgc ccgggcgggc gatacgctca aactggcttc
      541 cggcgtatat caaaccaaac tttatatcga caaaccgatt acgattgaag gacctgccga
      601 ccgttccgca accatcgaag gggacaggag cggtcgtacg atagctgtgc atgcgccgga
      661 cgtaacgctc cgcaacctga ccgttacacg ttccggtatg agcctgccag caatggatgc
      721 cggtatttat ctcgaagaaa ccgccccacg cgccctgatt gaacacaaca atatttttga
      781 taattcggtc ggcgtatatc tgcatggttc tgccgaagcg atggtgcgcg agaataaaat
      841 cgtcggcgac gcgactttgc gcgtgaacga gcgcggcaac ggcgttaccg tttggaacgc
      901 acccggtgcg caggtcgtcg gcaacgacat ttccaaaggg cgggacggca ttttttccaa
      961 caccagcacg cacaacacct ataaaaacaa ccgcttcagc gatttgcgtt tcgccgtcca
     1021 ctatatgtac accaacgaca gcgaagtcag cggcaatatt tccgtgggca acaatatggg
     1081 ctatgtgctg atgttttccg aacggctcaa agtattcgac aatattgccg tcggtagtcg
     1141 cgactagggc atcatgctca actatgtcaa ctattccgat attcacgaca atattatcaa
     1201 caaagcgggc aagtgcgttt ttgcctacaa tgccaactac gataaactgt ccgccaatca
     1261 ttttgaaaac tgccaaatcg gcatacactt taccgccgcc atcgaaggca cgtctctgca
     1321 cgacaattcc tttatcaaca acgaaagcca ggtcaaatac gtcagcacgc gctttctcga
     1381 ctggagcgag ggcggacacg gcaactattg gagcgacaac agtgcgttcg atttgaacgg
     1441 cgacggcttc ggcgacagcg cgtaccggcc caacggcatc atcgaccaaa tcatctggcg
     1501 cgcgcccgta ttgcgcctct tgatgaacag tctcgcaatc agcatcgtca aatgggcgca
     1561 ggcgcagttt cccgccgttc tgcccggcgg cgtggtggac agcaaaccgc tgatgaagcc
     1621 ttatgtcccc aaaattcaaa cccgctatca ggcaatgaag gacgagttgc tcaaagaagc
     1681 cgaaacacgg cagtcggaat ggggcagggc ggaaaacggt tctttgaact agtctgcttc
     1741 agacggcatc cggatccaaa tgccgtctga aaacacaaaa ggaacaacca tgaccacaca
     1801 tcatgtcgaa ttgaggaatg tcaccaaacg gttcggggcg caaaaagccg tcaaccaagt
     1861 cgatttggtt ttgaaggcag gagaaagcgt cgggcttgcc ggatacaacg gcgcgggcaa
     1921 gtccaccatt atgaagctga tactcgggct gattaccccg accgaaggcg aagtgatgct
     1981 tttgggcgaa cgtaccggca gcaaagcggg ggcgcggctt cgcagccaaa tcggctacct
     2041 gcccgaaact gttgcgttgc acccttcgct gaccggcatc gaaacgctgg atttttatgc
     2101 caaacttaaa aaacagccgc tcacgcagaa tcgggggctg ctcgagcgcg tcggcatttc
     2161 acaggcggca caccgccgcg tcggcactta ttctaaaggg atgcgccaac gccttgcctt
     2221 ggcacaagcc ctgctgggcg agcccaaagt cctgctgttt gacgaaccga caaccggcct
     2281 cgaccctgca tcaaggcaaa tgttttacga agtcgtgcgc gaactcaacg ggcgcggcgc
     2341 gaccgtattg ctcagtaccc acgcccttgc cgagttggac ggacacgccg accgcattat
     2401 cgtggattaa atttaaacca gtacggcgtt acctcgcctt accgtactat ttgtactgtc
     2461 tgcggcttcg ttgccttgtc ctgatttttg ttaatccact atatgcgggt atggcgggtt
     2521 tgagcggaca aatcagcctg accgtccccg ttttgctgac cgctcaggtt ttatgggtta
     2581 tcattccgct tgttttggca gccggaattt ttagaaagcg acaaatatga aaaaaaccct
     2641 gttggcaatt gttgccgttt ccgccttaag tgcctgccgg caggcggaag aggggccgcc
     2701 gcctttaccc cggcagatta gcgaccgttc ggtcggacac tattgcagta tgaacctgac
     2761 cgaacacaac ggccccaaag cccagatttt cttgaacggc aaacctgacc agccagtttg
     2821 gttctccacc atcaagcaga tgttcggcta taccaagctg cccgaagaac ccaaaggtat
     2881 acgcgtgatt tacgttaccg atatgggtaa tgttaccgat tggacaaatc ccaatgccga
     2941 cacgaagtgg atggatgcga aaaaagcctt ttatgtcatt gacagcggtt ttatcggcgg
     3001 tatgggtgcg gaagacgcac tgccgttcgg caacaaagag caggctgaga aatttgcaaa
     3061 ggataaaggc ggtaaggttg tcagtttcga cgatatgcct gatacctata ttttcaaata
     3121 aatccaaaca aaaatgccgt ctgaacgttg aagccaaggt tcagacggca
//
LOCUS       DAWEYF010000181         3121 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.181, whole genome shotgun sequence.
ACCESSION   DAWEYF010000181 DAWEYF010000000
VERSION     DAWEYF010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.181"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            45..2303
                     /locus_tag="WGN93_001850"
     CDS             45..2303
                     /locus_tag="WGN93_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ0227712.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFNVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALSGSQTDWQVSNSFEVEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGNDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVRAAELEKWADISANMYRPYDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYQRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGTLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLDGSHTAALEK"
     gene            2316..2981
                     /gene="pgmB"
                     /locus_tag="WGN93_001851"
     CDS             2316..2981
                     /gene="pgmB"
                     /locus_tag="WGN93_001851"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ0227713.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVSEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLET
                     LKANGKKIALASASKNGPFLLERMGLTHFFDAIADPAAVAHSKPAPDIFLAAAEGVDA
                     DIRQCIGIEDAVAGVAAIKAAGALPIGVGKAEDLGSDIALVSGTAELTYAYLQNVWAQ
                     SGR"
BASE COUNT          803 a          941 c          789 g          588 t
ORIGIN      
        1 gatttcacca ttccctcaaa tcaatccaaa caggagcttc ataaatgtac acaagaatta
       61 tggaaatcag cccttggacg ctgcgttcgg caaagctgga aaaagaacac aaacggctgc
      121 aagagagcct gaccagtttg ggcaacggct atatgggtat gcgcggcagc tttgaggaaa
      181 cctattccgc cgacagccac ttgggtacct atatcgccgg tgtgtggttt cccgacaaaa
      241 cccgcgtcgg ctggtggaaa aacggctacc ccaaatattt cggtaaagcc atcaacgcgc
      301 tcaatttcag caaagtcaaa atctttgtcg acggacaaga ggtggacttg gcgaaaaacg
      361 atgttgccgg cttctccgtc gaactcgata tgcagcacgg cgtgttgcgc cgctcgttca
      421 ccgtattcgg tgtgcgtttc aatgtgtgca aattcctgtc cgtcgcgcaa aaagagctgg
      481 cggttatccg ctgggaagcc gtatccgttg acggcaaaac ccaccaagtc cgcatcgatt
      541 ccatcatcga tgccgacgtg aaaaacgaag actccaacta cgaagaaaaa ttctggcagg
      601 tattggacaa aggcgtttca gacagtctct cctacattgc cgcccaaacc gttgccaacc
      661 ctttcggcgt ggaacaattt atcgtcaacg ccgagcaaac tttcgccggc agcttcaaag
      721 ccctcagcgg cagccaaacc gactggcaag tctccaattc tttcgaggtc gaagtcggcg
      781 gcacgcccaa aacctttgaa aaacgggtta ttgttaccac cagccgcgat tatcagggct
      841 tggaagcagt gaaagccgca ggccgcgcct tgtcggaaaa agtcgcaggc gttgcgtttg
      901 aaaccttgct ggacgcgcac aaagcaggct ggctgcaccg ttgggaaatc gccgacgtgg
      961 tcatcgaagg caacgacgaa gcgcagcaag gcatccgttt caatctgttc caactgttct
     1021 ccacctacta cggcgaagac gcgcgtctga acatcggccc gaaaggcttt accggagaaa
     1081 aatacggcgg cgcgacctat tgggacaccg aagcctacgc cgtgccgctc tacctcgcac
     1141 tggcggaacc cgaagttacc cgcaacctgc tgcaataccg ccgcaaccaa ctgccacagg
     1201 cgcaacacaa cgcgcgcgaa cagggcttgg cgggcgcact ctatccgatg gtaacgttta
     1261 cgggcatcga gtgccacaac gaatgggaaa tcaccttcga ggaaatccac cgcaacggcg
     1321 cgattcctta cgccatctac aactacacca actacaccgg cgacgagggc tatcttgcca
     1381 aagaaggctt ggaagtcttg gtcgaagtgt cccgcttctg ggcggaccgc gtccacttct
     1441 ccaaacgcaa cggcaaatac atgattcacg gcgtaaccgg cccgaacgaa tacgaaaaca
     1501 acatcaacaa caactggtac accaacaccc tcgccgcatg ggtattggac tacacccgcg
     1561 aagccctggc gaaatacccg cgtccggatt taaacgtgcg tgccgccgag ttggaaaaat
     1621 gggcggacat cagcgcgaat atgtaccgtc cgtatgacga agaactcggc gtattcgtac
     1681 aacacgacgg attcctcgac aaagacatcc gccccgtgtc cgcgctttcg cccgacgatt
     1741 tgccgctcaa ccagaaatgg tcgtgggaca aaatcctgcg ttcgcccttt atcaaacagg
     1801 cggacgtatt gcaaggcatc tatttcttcg gcgaccgttt caatatcgac gaaaaacgcc
     1861 gcaacttcga cttctacgaa ccgatgaccg tgcatgaaag ctcgttgtcg ccgtgtatcc
     1921 actctattct cgccgccgaa ctgggcaaag aagaaaaagc cgtggaaatg taccagcgca
     1981 ccgcccgcct agacttggac aactacaaca acgacaccga agacggcctg cacatcacct
     2041 ccatgaccgg ctcgtggctt gccatcgtcc aaggtttcgc ccaaatgaaa acctggggcg
     2101 gcacactcag cttcgccccg tttctgccga gcgcgtggac aggctacgcc ttccacatca
     2161 actaccgagg ccgtctgatt aaagtcgccg tcggcaaaga aaacgtcgtc ttcaccctgc
     2221 ttaaaggcga accgctcgat ttgcaggtgt acggcaaaga catcacgctc gacggcagcc
     2281 ataccgccgc tttggaaaaa taaggagggc gcaaaatgac gtttaccgct gtgctcttcg
     2341 atctcgacgg tgtcatcacc gataccgccg aataccatta ccgcgcatgg aaaaagctcg
     2401 ccgaagaact gggcatcagc atcgaccgca agtttaacga gcagctcaaa ggcgtgtcgc
     2461 gcgacgattc gctcaaacgc atcctcgcgc acggcggcaa aaccgtcagc gaagccgagt
     2521 tcgccgaact gacccgccgt aaaaacgaca actacgtcga gatgattcag gcagtcaaac
     2581 ccgaagacgt gtatcccggc attttgcccc tgctggaaac attgaaagca aacggcaaaa
     2641 aaatcgccct cgcgtccgcc agtaaaaacg gcccgttcct gctcgaacgc atggggctga
     2701 cccacttctt cgacgccatt gccgaccctg ccgccgtcgc gcattccaaa cctgcccccg
     2761 acatcttcct cgccgccgcc gagggcgtgg acgcagacat ccgccaatgc atcggcattg
     2821 aagacgccgt cgccggcgtc gccgccatca aagccgccgg cgccttgccc atcggcgtgg
     2881 gcaaagccga agacttgggc agcgacatcg cgctggtgtc cggcaccgcc gagctgacct
     2941 acgcctattt gcaaaacgtg tgggcacagt cgggcaggta aaatgcgtca gataaagtgt
     3001 caaggaagta aaaggctgtc tgaacagtgt ttcagacggc ctttctgctt ttatagtgga
     3061 ttaacaaaaa ccagtacggc gttgcctcgc cttagctcaa agagaacgat tctctaaagt
     3121 g
//
LOCUS       DAWEYF010000182         3096 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.182, whole genome shotgun sequence.
ACCESSION   DAWEYF010000182 DAWEYF010000000
VERSION     DAWEYF010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3096
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.182"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            41..982
                     /gene="mafA"
                     /locus_tag="WGN93_001852"
     CDS             41..982
                     /gene="mafA"
                     /locus_tag="WGN93_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ0227714.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATRYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNGTGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            986..2482
                     /gene="mafB"
                     /locus_tag="WGN93_001853"
     CDS             986..2482
                     /gene="mafB"
                     /locus_tag="WGN93_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ0227715.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADGYDGPKGGNYPKPTGA
                     RDEYTYNVNGVARSIKLNPTDTRDVRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AVIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSAAYNTRITRKVTTETEGLNRIRQNQKNSNIHEKNYGRDNPNHINVLSGNSI
                     QHILYGDEAGGGHLFPGKPGKTTFPQHWSASKITHEISDIVTSPKTQWYAQTGTGGKY
                     IAKGRPARWVSYETRDGIRIRTVYEPATGKVVTAFPDRTSNPKYNPVK"
     gene            2497..2727
                     /locus_tag="WGN93_001854"
     CDS             2497..2727
                     /locus_tag="WGN93_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ0227716.1"
                     /translation="MKTLDERIKNLGKSLEDRIDANLIDAALEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
     gene            2876..>3096
                     /locus_tag="WGN93_001855"
     CDS             2876..>3096
                     /locus_tag="WGN93_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-containing protein"
                     /protein_id="HEZ0227717.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTAQYGNPYR
                     ETVYIEISDGIGNNQTLISNKIHPFYSQG"
BASE COUNT          932 a          932 c          663 g          569 t
ORIGIN      
        1 atttacactc aaactcgttc aaaacaaaac aaaccctgcc atgaaaaccc tgctcctcct
       61 catccccctc gtcctaaccg cctgcggcac actgaccggc atacccgccc acggcggcgg
      121 caaacgcttt gccgtcgaac aagaactcgt cgccgcatcg tcccgcgccg ccgtcaaaga
      181 aatggatttg tccgccctga aaggacgcaa agccgccctt tacgtctccg ttatgggcga
      241 ccaaggttcg ggcaacataa gcggcggacg ctactctatc gacgcactga tacgcggtgg
      301 ctaccacaac aaccccgaaa gtgccacccg atacagctac cccgcctacg acactaccgc
      361 caccaccaaa tccgacgcgc tctccagcgt aaccacttcc acatcgcttt tgaacgcccc
      421 cgccgccgcc ctgactagaa acagcggacg caaaggcgaa cgctccgccg gactgtccgt
      481 caacggcacg ggcgactacc gcaacgaaac cctgctcgcc aacccccgcg acgtttcctt
      541 cctgaccaac ctcatccaaa ccgtcttcta cctgcgcggc atcgaagtcg taccgcccga
      601 atacgccgac accgacgtat tcgtaaccgt cgacgtattc ggcaccgtcc gcagccgcac
      661 cgaactgcac ctctacaacg ccgaaaccct taaagcccaa accaagctcg aatatttcgc
      721 cgttgaccgc gacagccgga aactgctgat tgcccctaaa accgccgcct acgaatccca
      781 ataccaagaa caatacgccc tctggatggg accttacagc gtcggcaaaa ccgtcaaagc
      841 ctcagaccgc ctgatggtcg atttctccga catcaccccc tacggtgaca caaccgccca
      901 aaaccgtccc gacttcaaac aaaacaacgg taaaaacccc gatgtcggca acgaagtcat
      961 ccgccgccgc aaaggaggat aaaccgtgaa accgctgcgc agactgacaa acctccttgc
     1021 cgcctgcgcc gtagcggccg ccgccttcgg acagcccgcc ctcgcggcgg acttggcgca
     1081 agatccgttc attaccgata acgcccaacg gcagcactac gaacccggag gcaaatacca
     1141 cctcttcggc gacccgcgcg gcagcgtttc cgaccgcacc ggtcaaatca acgtcatcca
     1201 agactatacc caccagatgg gcaacctgct catccaacag gcaaacatca acggcacaat
     1261 cggctaccac acccgctttt ccggacacgg acacgaagaa cacgccccct tcgacaacca
     1321 cgccgccgac agcgcaagca aagaacaagg caacgttgac gaaggcttta ccgtgtaccg
     1381 gctcaactgg gaaggacacg aacatcatcc cgccgacggc tatgacggcc cgaagggcgg
     1441 caattacccc aaacctacgg gagcacgcga cgaatacacc tataacgtta acggcgtagc
     1501 ccgcagcatc aaactcaatc cgaccgacac ccgcgacgtc agacaacgca tatccgacaa
     1561 ttacagcaac ctcggcagca atttctccga ccgcgccgat gaagccaaca gaaaaatgtt
     1621 cgagcacaat gccaagctcg accgctgggg caacagcatg gagtttatca acggcgtcgc
     1681 cgccggcgcg ctcaacccct ttatcagcgc gggcgaagcc ttgggcatag gcgacatact
     1741 gtacggaacg cgctatgcca tagacaaagc cgcaatgcgc aacatcgccc ccttgcccgc
     1801 cgagggcaaa ttcgccgtca tcggcggctt gggcagcgtg gcgggctttg aaaaaaatac
     1861 gcgcgaagcc gttgaccggt ggatacagga aaaccccaat gccgccgaaa ccgtcgaagc
     1921 cctggtcaac gtcctgccgt ttgccaaagt caaaaacctg acaaaggcgg caaaaccggg
     1981 gaaagctgcg gttagcgggg atttttctgc tgcatacaat acaagaataa ctagaaaagt
     2041 tactacagaa acagaggggt taaatagaat cagacagaac cagaaaaata gtaatataca
     2101 tgagaaaaat tatggaagag ataatcctaa tcatattaat gttttatctg gaaattctat
     2161 acaacatata ctgtatggag atgaagcagg aggtgggcat ctttttcctg gcaaacctgg
     2221 taagacaaca ttcccccaac attggtcagc cagtaaaata actcatgaaa ttagtgatat
     2281 cgttacatcc ccaaaaacgc aatggtatgc acagactgga acaggcggca aatatattgc
     2341 taaaggaaga ccagccaggt gggtatcata tgaaacgaga gatggaattc gtatcagaac
     2401 agtttatgaa cctgcaacag gaaaagtggt aactgcattc cccgatagaa cctctaatcc
     2461 caaatataac cctgtaaaat aatgagtatt tgaaagatga aaacattaga cgaacgaata
     2521 aaaaatttag gaaaatctct tgaagataga attgacgcta atctaattga tgccgcacta
     2581 gagtacatta ctttttcaga acgtttgcta gcttttgaaa cgctatgtga ttatatagaa
     2641 gatttcaata tccagcttac ggaaaaagaa tcccaagaaa tctcttttat taataaggaa
     2701 tttggaattg aaagtacatc agattaataa atattaggtc ggtttaaaaa cccaacaatc
     2761 aaaaagtcgt ctgaaactgt gtttaattta cagacgacct ttccttcatt tgaagcagga
     2821 tattgagaac tgagttcttc aaaaatccta cacctgctcc ttccacggca gcaccttggt
     2881 caaaacggca gacggctaca aagccattgc ccatattcaa gccggcgacc gcgtcttcgc
     2941 caaagatgaa accagtggaa aaactggata caaacctgtt accgcccaat acggcaatcc
     3001 gtatcgggaa accgtttaca ttgaaatttc agacggcatc ggcaacaacc aaaccctgat
     3061 ttccaataaa atccacccgt tttacagtca aggaaa
//
LOCUS       DAWEYF010000183         3091 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.183, whole genome shotgun sequence.
ACCESSION   DAWEYF010000183 DAWEYF010000000
VERSION     DAWEYF010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.183"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            7..2898
                     /locus_tag="WGN93_001856"
     rRNA            7..2898
                     /locus_tag="WGN93_001856"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            2995..3087
                     /gene="rrf"
                     /locus_tag="WGN93_001857"
     rRNA            2995..3087
                     /gene="rrf"
                     /locus_tag="WGN93_001857"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          848 a          660 c          924 g          659 t
ORIGIN      
        1 tgatagagtc aagtgaataa gtgcatcagg tggatgcctt ggcgatgata ggcgacgaag
       61 gacgtgtaag cctgcgaaaa gcgcggggga gctggcaata aagctatgat cccgcgatgt
      121 ccgaatgggg aaacccactg cattctgtgc agtatcctaa gttgaataca tagacttaga
      181 gaagcgaacc cggagaactg aaccatctaa gtacccggag gaaaagaaat caaccgagat
      241 tccgcaagta gtggcgagcg aacgcggagg agcctgtacg tgataactgt cgagatagaa
      301 gaacaagctg ggaagcttga ccatagtggg tgatagtccc gtattcgaaa tctcaatagt
      361 ggtactaagc gtacgaaaag tagggcggga cacgtgaaat cctgtctgaa tatgggggga
      421 ccatcctcca aggctaaata ctcatcatcg accgatagtg aaccagtacc gtgagggaaa
      481 ggcgaaaaga accccgggag gggagtgaaa tagaacctga aacctgatgc atacaaacag
      541 tggaagcacc ctagaggtgt gactgcgtac cttttgtata atgggtcaac gacttacatt
      601 cagtagcgag cttaaccgaa taggggaggc gtagggaaac cgagtcttaa tagggcgatg
      661 agttgctggg tgtagacccg aaaccgagtg atctatccat ggccaggttg aaggtgccgt
      721 aacaggtact ggaggaccga acccacgcat gttgcaaaat gcggggatga gctgtggata
      781 ggggtgaaag gctaaacaaa ctcggagata gctggttctc cccgaaaact atttaggtag
      841 tgcctcgagc aagacactga tgggggtaaa gcactgttat ggctaggggg ttattgcaac
      901 ttaccaaccc atggcaaact cagaatacca tcaagtggtt cctcgggaga cagacagcgg
      961 gtgctaacgt ccgttgtcaa gagggaaaca acccagaccg ccagctaagg tccccaatga
     1021 tagattaagt ggtaaacgaa gtgggaaggc ccagacagcc aggatgttgg cttagaagca
     1081 gccatcattt aaagaaagcg taatagctca ctggtcgagt cgtcctgcgc ggaagatgta
     1141 acggggctca aatctataac cgaagctgcg gatgccggtt taccggcatg gtaggggagc
     1201 gttctgtagg ccgatgaagg tgtattgtaa agtgtgctgg aggtatcaga agtgcgaatg
     1261 ttgacatgag tagcgataaa gcgggtgaaa agcccgctcg ccgaaagccc aaggtttcct
     1321 gcgcaacgtt catcggcgta gggtgagtcg gcccctaagg cgaggcagaa atgcgtagtc
     1381 gatgggaaac aggttaatat tcctgtactt gattcaaatg cgatgtgggg acggagaagg
     1441 ttaggttggc aagctgttgg aatagcttgt ttaagccggt aggtggaaga cttaggcaaa
     1501 tccgggtctt cttaacaccg agaagtgacg acgagtgtct acggacacga agtaaccgat
     1561 accacgcttc caggaaaagc cactaagctt cagtttgaat cgaaccgtac cgcaaaccga
     1621 cacaggtggg caggatgaga attctaaggc gcttgagaga actcaggaga aggaactcgg
     1681 caaattgata ccgtaacttc gggagaaggt atgccctcta aggttaagga cttgctccgt
     1741 aagcctagga gggtcgcaga gaataggtgg ctgcgactgt ttattaaaaa cacagcactc
     1801 tgctaacacg aaagtggacg tatagggtgt gacgcctgcc cggtgctgga aggttaattg
     1861 aagatgtgag agcatcggat cgaagcccca gtaaacggcg gccgtaacta taacggtcct
     1921 aaggtagcga aattccttgt cgggtaagtt ccgacccgca cgaatggcgt aacgatggcc
     1981 acactgtctc ctcctgagac tcagcgaagt tgaagtggtt gtgaagatgc aatctacccg
     2041 ctgctagacg gaaagacccc gtgaaccttt actgtagctt tgcattggac tttgaagtca
     2101 cttgtgtagg ataggtggga ggcttagaag cagagacgcc agtctctgcg gagccgtcct
     2161 tgaaatacca ccctggtgtc tttgaggttc taacccagac ccgtcatccg ggtcggggac
     2221 cgtgcatggt aggcagtttg actggggcgg tctcctccca aagcgtaacg gaggagttcg
     2281 aaggttacct aggtccggtc ggaaatcgga ctgatagtgc aatggcaaaa ggtagcttaa
     2341 ctgcgagacc gacaagtcga gcaggtgcga aagcaggaca tagtgatccg gtggttctgt
     2401 atggaagggc catcgctcaa cggataaaag gtactccggg gataacaggc tgattccgcc
     2461 caagagttca tatcgacggc ggagtttggc acctcgatgt cggctcatca catcctgggg
     2521 ctgtagtcgg tcccaagggt atggctgttc gccatttaaa gtggtacgtg agctgggttt
     2581 aaaacgtcgt gagacagttt ggtccctatc tgcagtgggc gttggaagtt tgacgggggc
     2641 tgctcctagt acgagaggac cggagtggac gaacctctgg tgtaccggtt gtaacgccag
     2701 ttgcatagcc gggtagctaa gttcggaaga gataagcgct gaaagcatct aagcgcgaaa
     2761 ctcgcctgaa gatgagactt cccttgcggt ttaaccgcac taaagagtcg ttcgagacca
     2821 ggacgttgat aggtggggtg tggaagcgcg gtaacgcgtg aagctaaccc atactaattg
     2881 ctcgtgaggc ttgactctat catttgaaga acttcaagag ataaaagctt actgactgat
     2941 tcagtcatta ccgaatatat tgattaaggc tttaccgatt tgtaacagtt taagtttggc
     3001 ggccatagcg agttggtccc acgccttccc atcccgaaca ggaccgtgaa acgactcagc
     3061 gccgatgata gtgtggttct tccatgcgaa a
//
LOCUS       DAWEYF010000184         3083 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.184, whole genome shotgun sequence.
ACCESSION   DAWEYF010000184 DAWEYF010000000
VERSION     DAWEYF010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3083
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.184"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            110..2878
                     /locus_tag="WGN93_001858"
     CDS             110..2878
                     /locus_tag="WGN93_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0227718.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGGLKFNSNSGKWER
                     DFQKSYWKTKWYQKYDDPQELQKYIEGHDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYREHCNPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
     gene            2908..>3083
                     /locus_tag="WGN93_001859"
     CDS             2908..>3083
                     /locus_tag="WGN93_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227719.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVVY"
BASE COUNT          863 a          768 c          753 g          699 t
ORIGIN      
        1 attgaaatct tcagacggta tatcgaattt acacttttta atgtttatgc cgcctaaaaa
       61 aatgctaata tatttcttaa ttgtctgact gtttattgtt gaggaaaata tgagatcttc
      121 tttccggttg aagccgattt gtttttatct tatgggtgtt atgctatatc atcatagtta
      181 tgccgaagat gcagggcgcg cgggcagcga ggcgcagata caggttttgg aagatgtgca
      241 cgtcaaggcg aagcgcgtac cgaaagacaa aaaagtgttt accgatgcgc gtgccgtatc
      301 gacccgtcag gatatattca aatccagcga aaacctcgac aacatcgtac gcagcatccc
      361 cggtgcgttt acacagcaag ataaaagctc gggcattgtg tctttgaata ttcgcggcga
      421 cagcgggttc gggcgggtca atacgatggt ggacggcatc acgcagacct tttattcgac
      481 ttctaccgat gcgggcaggg caggcggttc atctcaattc ggtgcatctg tcgacagcaa
      541 ttttattgcc ggactggatg tcgtcaaagg cagcttcagc ggctcggcag gcatcaacag
      601 ccttgccggt tcggcgaatc tgcggacttt aggcgtggat gacgtcgttc agggcaataa
      661 tacctacggc ctgctgctaa aaggtctgac cggcaccaat tcaaccaaag gtaatgcgat
      721 ggcggcgata ggtgcgcgca aatggctgga aagcggagca tctgtcggtg tgctttacgg
      781 gcacagcagg cgcagcgtgg cgcaaaatta ccgcgtgggc ggcggcgggc agcacatcgg
      841 aaattttggc gcggaatatc tggaacggcg caagcagcga tattttgtac aagaaggcgg
      901 gttgaaattc aattccaaca gcggaaaatg ggagcgggat ttccaaaagt cgtactggaa
      961 aaccaagtgg tatcaaaaat acgatgaccc ccaagaactg caaaaataca tcgaaggtca
     1021 tgacaaaagc tggcgggaaa acctggcgcc gcaatacgac atcaccccca tcgatccgtc
     1081 cagcctgaag cagcagtcgg caggtaatct gtttaaattg gaatacgacg gcgtattcaa
     1141 taaatacacg gcgcaatttc gcgatttaaa caccaaaatc ggcagccgca aaatcatcaa
     1201 ccgcaattat caattcaatt acggtttgtc tttgaacccg tataccaacc tcaatctgac
     1261 cgcagcctac aattcgggca ggcagaaata tccgaaaggg tcgaagttta caggctgggg
     1321 gcttttaaag gattttgaaa cctacaacaa cgcaaaaatc ctcgacctca acaacaccgc
     1381 caccttccga ctgccccgtg aaaccgagtt gcaaaccact ttgggcttca attatttcca
     1441 caacgaatac ggcaaaaacc gctttcctga agaattgggg ctgtttttcg acggtccgga
     1501 tcaggacaac gggctttatt cctatttggg gcggtttaag ggcgataaag ggctgctgcc
     1561 ccaaaaatca accatcgtcc aaccggccgg cagccaatat ttcaacacgt tctacttcga
     1621 tgccgcgctc aaaaaagaca tttaccgctt aaactacagc accaataccg tcggctaccg
     1681 tttcggcggc gaatatacgg gctattacgg ctcggatgac gaatttaagc gggcattcgg
     1741 agaaaactcg ccgacataca gggaacattg caacccgagt tgcgggcttt atgaacccgt
     1801 attgaaaaaa tacggcaaaa agcgcgccaa caaccattcg gtcagcatta gtgcggactt
     1861 cggcgattat ttcatgccgt tcgccagcta ttcgcgcaca caccgtatgc ccaacatcca
     1921 agaaatgtat ttttcccaaa tcggcgactc cggcgttcac accgccttaa aaccagagcg
     1981 cgcaaacact tggcaatttg gcttcaatac ctataaaaaa ggactgttaa aacaagatga
     2041 tacattagga ttaaaactgg tcggctaccg cagccgcatc gacaactaca tccacaacgt
     2101 ttacgggaaa tggtgggatt tgaacgggga tattccgagc tgggtcagca gcaccgggct
     2161 tgcctacacc atccaacacc gcaatttcaa agacaaagtg cacaaacacg gttttgagtt
     2221 ggagctgaat tacgattatg ggcgtttttt caccaacctt tcttacgcct atcaaaaaag
     2281 cacgcaaccg accaacttca gcgatgcgag cgaatcgccc aacaatgcgt ccaaagaaga
     2341 ccaactcaaa caaggttatg ggttgagcag ggtttccgcc ctgccgcgag attacggacg
     2401 tttggaagtc ggtacgcgct ggttgggcaa caaactgact ttgggcggcg cgatgcgcta
     2461 tttcggcaag agcatccgcg cgacggcaga agaacgctat atcgacggca ccaacggggg
     2521 aaataccagc aatgtccggc aactgggcaa gcgttccatc aaacaaaccg aaactcttgc
     2581 ccgccagcct ttgatttttg atttttacgc cgcttacgag ccgaagaaaa accttatttt
     2641 ccgcgccgaa gtcaaaaatc tgttcgacag gcgttatatc gatccgctcg atgcgggcaa
     2701 tgatgcggca acgcagcgtt attacagctc gttcgacccg aaagacaagg acgaagacgt
     2761 aacgtgtaat gctgataaaa cgttgtgcaa cggcaaatac ggcggcacaa gcaaaagcgt
     2821 attgaccaat tttgcacgcg gacgcacctt tttgatgacg atgagctaca agttttaaag
     2881 gcagcccgca ttttgtagaa aaccgcaatg ccgtctgaaa gcccttcaga cggcatttgt
     2941 ttccccaaac gcatcatcct gccgcaagcc tatgccaatc cgttttatcg catcggcaac
     3001 tcaaagaaaa atccatttca ttcccacgca gggaagccgg tttttgattt cggttatttt
     3061 tggttgtttc gggtagttta tga
//
LOCUS       DAWEYF010000185         3080 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.185, whole genome shotgun sequence.
ACCESSION   DAWEYF010000185 DAWEYF010000000
VERSION     DAWEYF010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.185"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(92..943)
                     /locus_tag="WGN93_001860"
     CDS             complement(92..943)
                     /locus_tag="WGN93_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ0227720.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1286..2800
                     /gene="katA"
                     /locus_tag="WGN93_001861"
     CDS             1286..2800
                     /gene="katA"
                     /locus_tag="WGN93_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ0227721.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGVGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
BASE COUNT          743 a          870 c          794 g          673 t
ORIGIN      
        1 gatgcaggtt tccgcgcgga cggattcggc attcccgctt tcgcagaaat gccggctttt
       61 ggtttgttgt ctttataaga ttattcggca attattctgc ggttttgcgt ttgtgtgctg
      121 ccggaatctc aaaggattct ctgtatttgg caatggtgcg gcgagaaacc tccatgccgc
      181 ggaaagccag caggttggcg agcgcctcgt cagaatacgg cgtgggtgtg gacgaggcaa
      241 aaccagcggc gggaaaggga ttgagcgaag caatgaggtc gagtgcggct tcgagtgtgc
      301 cgctgtcggt ttggggcagg cgttttttta ttcgcgcgag ggtttggctg cggttgccgt
      361 caatgctgtc gagggcgttt cggacgatat gcagggcgga gggtttggca gcacattcgc
      421 ccgatctttc tatctgcagt atcagcgatt cgttcaaatc ggcggcggcc acgcctgccg
      481 ggtcgaattt tttcaatgcg gtcagggctt gtttcagcat tgcttcatcc aacatccact
      541 ccaagggcgt atggtcgagg atgtcttcga tgctgtcggt cagataacct tgctcgtcaa
      601 ggaaatcgat gaggatgtgg acacaggcgg attcttgatc ggaaagcggg tgttcgcata
      661 cttgcgcgtg caggtattgc ttgaaatcct gctcgccggc gatgttggac agcatatctt
      721 cgccttcgtc tccgccgatt tgacgggcag gcgcagtgta atggctgaac tcggcatcgg
      781 aaaattcatc cgtatctttg cgttcgagca gggggttgtc cgacagccag ttttcgacct
      841 cgcgttcaag ttcgataccc gacatctgca atacgcgcaa agattgttgc agccgctggt
      901 tgagctgctg ggtctgtttg agctttattc cgagtaacgt catgataatg cgaaagaatt
      961 attattttgg cctgtcggtg gcagatgatg ccgggaaaca ttattataaa tggttttatg
     1021 tagggatttt gattcgtgcc gataacaaaa aacaaacgaa aatcaaaaac cgattgctta
     1081 taacaatatt aaatcgattt catagtttta atagcgaaaa tcttagcgta tagtcgcatc
     1141 catagttttt acaaaaggaa aacaaaatgt cgattcaaga aatttattgc aatcaagaaa
     1201 ccggttacga atacgctttc cgccaaatcg tactgtaagc cgtttgtcgt atcttttgat
     1261 taaccaagga aaaggaacac gagctatgac tacctccaaa tgccccgtaa cccatctgac
     1321 catgaacaac ggcgcgcctg ttgccgacaa tcaaaacagc ctgaccgccg gtccgcgcgg
     1381 ccctctgctg gcgcaggatt tgtggctgaa tgaaaaactc gccgacttcg tgcgcgaagt
     1441 catccccgaa cgccgtatgc acgccaaagg ttcgggcgcg ttcggtacgt ttaccgtaac
     1501 gcacgacatc accaaataca cccgcgccaa aatcttcagc gaagtcggca aaaaaaccga
     1561 gatgttcgcc cgtttcacca ccgtggcagg cgaacgcggc gcagccgatg cagaacgcga
     1621 catccgcggt tttgccttga aattttatac cgaagaaggc aactgggatg tggtcggcaa
     1681 caacacgccc gtgttcttcc tgcgcgaccc gcgtaagttc cccgacctga acaaagccgt
     1741 caaacgcgac ccgcgcacca atatgcgctc tgccacaaac aactgggact tctggacgct
     1801 gctgcccgaa gcactgcacc aagttaccat cgtgatgagc gaccgcggca tccccgccgg
     1861 ctaccgccat atgcacggct tcggttcgca tacctacagc ttctggaacg aagcaggcga
     1921 gcgtttttgg gtgaaattcc atttccgcac ccaacaaggc attaaaaacc tgaccaacga
     1981 agaagccgcc aaaatcatcg ccgacgaccg cgaaagccat cagcgcgact tatacgaagc
     2041 catcgaacgc ggcgagtttc cgaaatggac gatgtacatc caagtcatgc ctgaagcaga
     2101 cgcggaaaaa gtaccttatc atccgtttga cttgaccaaa gtttggccga aaaaagacta
     2161 tccgctgatt gaagtgggcg aattcgagtt gaaccgcaat cccgaaaact tcttcgccga
     2221 tgtggaacaa tccgccttcg caccgagcaa cctcgttccc ggtgtcggcg ccagcccaga
     2281 taaaatgttg caagcccgtt tgttcaatta cgccgacgcg caacgctacc gcttgggcgt
     2341 gaacttccgc caaatccctg tcaaccgtcc gcgttgccct gttcacagca accagcgcga
     2401 cggacaagga cgcgccgacg gcaactacgg cagcctgccg cactacgaac ccaacagctt
     2461 cggccaatgg cagcagcagc ccgacttcgc cgaaccgcct ttgaaaatca acggcgacgc
     2521 ggcacactgg gactaccgcc aagacgatga cgactatttc agccaaccgc gcgccctgtt
     2581 caacctgatg aacgacgcgc agaaacaggc attgttcggc aacaccgccg ccgcaatggg
     2641 cgacgcgccc gacttcatca aataccgcca tatccgcaac tgctaccgtt gcgatccggc
     2701 atacggcgaa ggcgtggcaa aagccctcgg actgactgtc gaagacgcac aagccgcccg
     2761 cgcgaccgac cccgcactcg gccagcccgg tttgctgtaa gggggcatta tgtggatgga
     2821 aattgaagaa atcctgtccc gcgccgtccg ctaccggaaa taaccgggca taaaaatgcc
     2881 gtctgaaacg tcgtttgacc gcttcagacg gcatttcccc atcccgcccc cgccgtttca
     2941 gtgggcgttt tttattaaac gcaaaatatc ccgtcattcc cgccccacag cccacttttc
     3001 cgccgtcatt cccgcaccat ccccaccggt tcaaaccggc acgaaaactt ttccgcgtca
     3061 ttcccgcgaa agcgggaatc
//
LOCUS       DAWEYF010000186         2959 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.186, whole genome shotgun sequence.
ACCESSION   DAWEYF010000186 DAWEYF010000000
VERSION     DAWEYF010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.186"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(137..1879)
                     /gene="hrpB"
                     /locus_tag="WGN93_001862"
     CDS             complement(137..1879)
                     /gene="hrpB"
                     /locus_tag="WGN93_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ0227722.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISTFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETESGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGDILPGTSRMKIITADLDAAAPFILGKQQF
                     FYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNH
                     QFYLGADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQ
                     TTNTVYGFNLNYSF"
     gene            complement(1940..2179)
                     /locus_tag="WGN93_001863"
     CDS             complement(1940..2179)
                     /locus_tag="WGN93_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ0227723.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTDL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
     gene            complement(2463..2765)
                     /locus_tag="WGN93_001864"
     CDS             complement(2463..2765)
                     /locus_tag="WGN93_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227724.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
BASE COUNT          825 a          660 c          629 g          845 t
ORIGIN      
        1 gataatgcga tgtaaacctt tattcatgtc tattccattt tgaagatgaa cgtactgcgc
       61 gccaagtacg taggtaaagt ttgacggtct gaggataagg aaagaccgtc taaatatcag
      121 taaaaaaatt cagaggttag aaactgtaat tcaagttgaa gccgtaaacg gtgttggtcg
      181 tctgaaagcc tttgggttta tgaagcggct tgccggcaaa cagatcataa gcaaacatac
      241 cgcctacttt atgccctcct ctgaagccga ccactgcacc catcagctgc ttgcccgata
      301 catattgtgc actttcgcca gatacgcggc catagtccgc accgagatag aactgatggt
      361 tcggatgaaa ataccaagtt aaagtattct gccagtagaa acctcgctct ccgaaaagac
      421 tctgctcccc atcaaatccg cgaacggtgt agcggctgcc gattgacaat ttatcttggg
      481 caaccaacgg cgttttgttc cattgagctt gaatggcggt tgcgtagaaa aactgctgtt
      541 tgcctaaaat aaatggggcg gctgcgtcca aatcggcagt aatgattttc atacgagatg
      601 tacctggaag aatatcgccg ccgttttctt caggtgcggg catactttgg cgcataccgg
      661 tcccgcgttt gtaagacaac ttgccgtcaa gctgccaacg gttgaggtaa gcacggtggc
      721 gcaattcggc ttcccagcct gcagagcggc ggcgttgcac ttcgatttcg gcatcgtcga
      781 tgtatttata ggtttggcgt gtccataatt tcattccgac tgaagtttta tgaaacctgt
      841 tacgccaaag catgcgctcg gcggccaggc tgctctgata ttgtttgccg ttgtaatcgt
      901 aattgacgga atagccttcg gttgcttcgt ggtaacgatg tccattgtga ttaaaagaaa
      961 acagccattt ttttacgggc accgaataat gcacgctgta acttctggat ccgctttcag
     1021 tttccgtacc ggtggcatca gtcaagtccg ttttgtgcgc caaaccgcgt ccatatgaaa
     1081 cataaaacaa atcgcttaag cccaaagggt tatcgaacga taaagcgaca tttccttgat
     1141 atttgccggt cgttttgccg cccgcatcat ctataccgat actgaaccgt atgggtttat
     1201 tctgctgcca tttgatctgt aaatcgcttt tgccttcttc ttcggacggt ataatctgaa
     1261 tatctgtttt aacactcgac aaacgacgca ggttttccaa gccctgctct acatcgcgaa
     1321 gattgagaat tttgttccta tataagggaa atttgttatt gaatgtacta atactgcctt
     1381 cggcagactt cccatcccgt ttttcttcat agcggatatc ccctatttcg cctgctgata
     1441 cccgtaattt cagaattccc gaatccatat tctgtggttg gataatagct tgggaagtga
     1501 ggtagccacg cacaatcagt atctgttgcg cggctttttg tagcctgctc aaattattgg
     1561 aacctaaaca catcccagtt ttaaaagctg tttctttcat gagcacagaa ggaagaaaag
     1621 aaaatttgcg cgccgtctta tcatctaaac taatgtaatt tacccgagta cacggtgttt
     1681 catcttcact caggacataa ttgttcttct ccaatggttg ctcgaaacgg acatttgcat
     1741 cagttaacaa ttcagcatct atgtgctgct gacgctgcat ggaacggata agttctgcat
     1801 cgttttcatc ggcagctaag gttttaaggg gtatgacagc caggataacc aacagacatg
     1861 gagcaggaaa aaatttcatg acatcaatat tattttagca atatttacta ttttgtcata
     1921 aatttaaaag tatttacagt tatagaatga gacctttgca aaattcccca aaattcccac
     1981 caagacattt aggggatttt ggggaatttt gcaaaggtct cggacagtat tttgaacgca
     2041 gtgcgcgtaa atccgtatgg aaaccatgaa atcccgccac agccgccaga catgccaagc
     2101 cgcattctga tatttctgtt tgcaggataa caggcagctt tttctttaag cccaaagaca
     2161 ggttttgcag atggggcata gatttccttt ttgaaaaata gggattagga agttggatgt
     2221 attttagaaa ggccgcctga aaaggtttca gacgaccttt tgcgactagc tgctatttta
     2281 tttaaagctt ttctctaaca aacgagctaa tatttttcct gtaataaaac agataaaaaa
     2341 cagcatccaa tacgtcagat tggaaaaatc ggtcgtatag agaatcaaca tataaagaag
     2401 cagcatgatg ccgagtgcga tgaattgata atgtttggca aacatcatga cctcctcaac
     2461 tattaaggca aaccgcctga atattctcgt tcaatcgttt cggcaatttc cctataacgt
     2521 cgataccatg accagtcgaa attttcaatg gcatggctcg caaacgtacc aaattcaggc
     2581 atccctatgc ggctacctgc taaagctccg attgtagctc cccaaccagg cggattactg
     2641 aacgtattgt ttggcaatcc taaagattta tcaggatttc ccgtatcgtt aagccctgca
     2701 gattcgcaaa tttcgcaata atatgagctt tgttgcgcat tacctgagcc tccgacccaa
     2761 gtcatttcat gaacacatat agtggattaa atttaaatca ggacaaggcg acgaagccgc
     2821 agacagtaca aatggtacgg caaggcgagg caacgctgta ctggtttttg ttaatccact
     2881 ataaaactct cattttgaaa ctccttgtat cgttaatcaa acaatcaaaa gggcagatgc
     2941 cctatccttg cttttacag
//
LOCUS       DAWEYF010000187         2956 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.187, whole genome shotgun sequence.
ACCESSION   DAWEYF010000187 DAWEYF010000000
VERSION     DAWEYF010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.187"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            465..1244
                     /locus_tag="WGN93_001865"
     CDS             465..1244
                     /locus_tag="WGN93_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ0227725.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYRHSFHFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(1455..2867)
                     /locus_tag="WGN93_001866"
     CDS             complement(1455..2867)
                     /locus_tag="WGN93_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ0227726.1"
                     /translation="MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLIAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGAINYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFP
                     ALGSLHAYKIKAELVRHYGADCYVSAKNLLKTFTTVRFEKGSDGMLDAKTAALKNGVA
                     DNPPTGLFVNKKAARRALSLWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKD
                     LPDAFKAKFKTDRKNIKEIG"
BASE COUNT          864 a          833 c          540 g          719 t
ORIGIN      
        1 tataacgaat tttaattggg attatgtaaa actgtatata atcaattcag atttccaaaa
       61 aattgttttt tattataaag gtaagatagt ttttgaggaa ttaatagaac tagatggaga
      121 agggaatgtt ttacctcaat atctatttga ttcagatttg gaaaatattg aatattacga
      181 atgtgattac aagaatggca agatgcggct tttaaaaaaa gaaaaatcac attttttgat
      241 ggatattttt attattataa acctataaat tgcaggccga aacttttgta aaaccgtcca
      301 tactcattac cgcctagtcg gtaatgcatt ttcttagtag tatttgaaaa agtatgatga
      361 taaaaacggt caagcctaac tttttcataa aatccagcag agcaaggcag aaaaaaacac
      421 ccaaattggc tataatcccg acaaacacac tcaaggacaa caacatggca gcctcgcccg
      481 aagcaaaatt cactgaagaa aagattttgt gggtcaaaca ccacacgccg aaactcatca
      541 ctttcgccat cagccgtccc gaatcctacc gttttaaagc cggacagttc tcccgactcg
      601 gtttctacga aggggaaggc tttatttggc gtgcctactc catcgtttcc gcagaatatg
      661 ccgacacgct cgaatatttt gccgtactca tccaagacgg ccccatgtcg gcccgtttcg
      721 ccaaaatgca acagggcgac accatcctgc tcgataaaaa tgccaccggc ttcctcctgc
      781 ccgaacgctt ccccgacggc aaggatttgg tgatgctctg caccggctcc ggcatcgccc
      841 ccttcctttc cattctcgaa caacccgaaa tccggcagcg tttcgatacc gtcaacctga
      901 tacattccgt atcttttccc gaagaattga ttttcaacga ccggctcgcc gcattgtccg
      961 aacatcccct ggtaggcgaa tacagacact cgttccattt cgtccctgtt accacccgtg
     1021 ccgccaaccc ctcgggctta agcggaaaac gcattccgga actcttaaaa aacagcagca
     1081 tcgaacaggc gctgcatacc aagttcaccc cggaatccac acggtttatg atttgcggca
     1141 acccggaaat ggtcaaagat actttccaaa cgctgcttga catgggttac gccatgcacc
     1201 gcaaccgcat tcccggtcaa atcatgatgg aaaacggctt ctaaaaacca ccctgcttgt
     1261 ccgatgcctt cggatggacg gtcaaaccga cacggcacga aaaccgcgtc ggcaaaaatg
     1321 ccgtctgaaa aaattcagac ggcatcttcg gacacattac ctgcaaacgg caacacattc
     1381 caacccaaac cgattaggca atcaatacga acggctgttt acatacttac cggctttcat
     1441 caaccggtat cgatttaacc gatttcctta atatttttcc tgtccgtttt aaacttcgcc
     1501 ttaaacgcat ccggtaaatc tttatcgaaa taccaaagcc cgtcacccat ttccaatgcg
     1561 ccgcccattc catgcagaac aactttttcc cccgttaaag gatcagtttc ggtaatttct
     1621 acctcatgca tttttcccca atccaaaata ggcaacttgt gtgcaaacgc caaaacctgt
     1681 tcgtcagaac ggccgcacgc cttatcgcat cggcctgaaa catatacggg acaaggctca
     1741 tcctctgcat aaccgtccgg aaggataccg gctgcggcag gacacaatcc gtatgtttcc
     1801 gcccacaacg acaaagcccg tctcgctgcc tttttattga caaataatcc ggtaggcgga
     1861 ttgtccgcca caccgttttt caaagccgct gttttcgcat ccaacatgcc gtctgaacct
     1921 ttttcaaacc tgacggtcgt aaatgtttta agcagatttt tggcagatac gtaacaatcc
     1981 gccccataat gcctgaccaa ttccgcttta atcttatatg catgcaggct gcccaatgcg
     2041 ggaaaaaaac ggactgcctc cgtattgcac caatcaaacg aggcttttcc ggaatccaat
     2101 aaagccgaaa cctcgctata tacccgttca aacgtaccga tataatttat tgctcccccg
     2161 ccgtcgaaac aggcaagcac ccccataccg tcaggcaaac cgtacaactg ttccctcaac
     2221 cgttcgggca gcgcggcagg cagcggtttc ggattcatca aacggaaaca ctgcctgatc
     2281 cactcctcga ccccgtgttc cgacagactg tattccaaat aatcacacaa tgccgataca
     2341 tccgccatcg cacgatgcct gtcttccaca acaatcccca acctttcgat gatactgtcc
     2401 aggctgtgct tgtaaaattg cggatacaga caccgggaca gctgcacact gcacaaagca
     2461 ggcgatgaaa atccgatacc cgcacgatga aactcatgct ttaaaaacgt atagtcgaaa
     2521 cggctgttat gtgcaatcaa cacacaaccc ttcaataccg aaaacaactc gccggcaatc
     2581 tctgcaaaaa caggtgcgtc ggcaaccatg ccgtctgaaa tccccgtcag ccccgccaca
     2641 aactgcggaa taggtttttg aggattaacc agccactcat gccttaccac ccttccctgc
     2701 tcaaacttga ccaaagccac ttcggttacc ctgtcttcat acagattgcc gcccgtcgat
     2761 tccaaatcaa ccacggcaac aggcattcca aaccgtaaaa ataccttttc cagcaagggc
     2821 cagcgggaag caacaatcat tttattctct ttaaattcaa acaacaaacc gatattttac
     2881 acttttaagg catttcatcc aacaaaacaa ttgacagaat ccgatgatta ccctaaaatt
     2941 caaatctttc ttgcag
//
LOCUS       DAWEYF010000188         2935 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.188, whole genome shotgun sequence.
ACCESSION   DAWEYF010000188 DAWEYF010000000
VERSION     DAWEYF010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.188"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            162..1274
                     /gene="nadA"
                     /locus_tag="WGN93_001867"
     CDS             162..1274
                     /gene="nadA"
                     /locus_tag="WGN93_001867"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ0227727.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNSGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            1326..2834
                     /gene="nadB"
                     /locus_tag="WGN93_001868"
     CDS             1326..2834
                     /gene="nadB"
                     /locus_tag="WGN93_001868"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ0227728.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLSQGVAFDQ
                     NNNGLHLTREGGHTCRRIAHVADYTGEAVMQSLIAQIRRCPNIRVYERQMALDIQTES
                     GAAYGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQSGERFMPHYDLRAELAPR
                     DIVARDIAAEIAKQTQDFVSLDISHQPAAFVRQHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQTVPSQRSSEHPSAEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLHR
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT          685 a          903 c          807 g          540 t
ORIGIN      
        1 caaagcggtt tgtcggaacg aagcgggtcg gttttacggt atcgcaaacc tgttttcaga
       61 cgaccttgct tattatactc aagttgagca taatataaaa cagtttgaaa agcagacggc
      121 aaaccttcat gccgtctgaa aaccagctac aaggaaacat catgcaaacc gccgcccgcc
      181 gctcgttcga ctacgatatg cccctcatcc aaacgccgac ttccgcctgc caaatccgtc
      241 aggcgtgggc gaaggttgcc gatacgcccg accacgagac ggcaggccgt ctgaaagacg
      301 aaatcaaggc tttgctgaag gagaaaaacg cggtcttggt ggcgcattat tacgtcgatc
      361 cgctgattca ggatttggct ttggaaacgg gcggatgcgt gggcgattcg ctggaaatgg
      421 cgcgcttcgg tgcggaacac gaagccggta cgctggtggt ggctggtgtg cgcttcatgg
      481 gcgagagcgc gaaaatcctc tgccctgaaa aaacggtgct gatgcctgat ttggaggcgg
      541 aatgttcttt ggatttgggt tgtcccgaag aagcgttttc agcgttttgc gaccaacacc
      601 ccgaccgcac ggtggtggtg tacgccaaca cttccgccgc cgtgaaagcg cgtgccgact
      661 gggtggtaac gtcttcggtg gcgttggaaa tcgtgtcgta tttgaaatcg cgcggcgaga
      721 aactgatttg gggacccgac cgccacctcg gcgactacat ccgccgcgaa acgggcgcgg
      781 atatgctgtt gtggcagggt tcgtgcatcg tccataacga attcaaaggg caagagctgg
      841 cggcgttgaa ggcggaacat cccgacgcgg tggtgctggt tcatcccgaa tcgccgcaaa
      901 gcgtcatcga actgggcgac gtggtcggct cgaccagcaa actgctcaaa gccgccgtat
      961 cgcgtcctga aaaaaaattc atcgtggcga ccgatttagg catcctgcac gaaatgcaaa
     1021 agcaggcgcc cgacaaagaa tttatcgccg caccgacggc gggcaacagc ggaagctgca
     1081 aaagctgcgc gttctgcccg tggatggcga tgaattcgct gggcggcatc aaatacgccc
     1141 tgacaagcgg gcacaacgaa atcctgttgg acagaaagct gggcgaagcc gccaaactgc
     1201 ctttacagcg tatgctcgac ttcgcggcag gactcaaacg cggggatgtg ttcaacggca
     1261 tgggccccgc ctgatttgcc gtcaatattg ccgtttcaga cgacctctca aacaaggaca
     1321 acaccatgca aaccgattgc gacgtattga ttgccggaaa cgggctggcg gcactgacgc
     1381 tcgccctgtc gctgcctgaa tcgttccgca tcgtcatttt gtgcaaaaac cggctggacg
     1441 acaccgccag ccgtcatgcg caaggcggga ttgcggcggc gtggtcggga gaggacgaca
     1501 tcgaaaaaca cgttgccgat accttggaag ctggcgcggg tttgtgcgac gaagccgccg
     1561 tccgcaccat cctgtcgcag ggcaaaccgg caatcgaatg gctgctgtcg cagggcgtgg
     1621 cgttcgacca aaataataac ggcctgcacc tgacacgcga aggcgggcat acctgccgcc
     1681 gaatcgccca cgtcgccgat tacacgggcg aagccgtcat gcagagcctg attgcccaaa
     1741 tacgccgctg cccgaacatc cgcgtttacg agcggcagat ggcgttggac atccaaaccg
     1801 aatcaggcgc agcgtacgga ctgaccgtcc tcgactgccg aacgcaagaa acctaccgca
     1861 tccgcgcccg ccataccgta ctcgcaggcg gcggcttggg acagatttac gccgccacca
     1921 ccacgccgcc cgaatgcacg ggcgacgcca tcgccatggc aatacgcgca ggctgcgcag
     1981 tcgaaaacct cgaatttatc caattccacc ccacaggctt ggcaaggccg tctgaaaacg
     2041 gacgcacctt cctgatttcc gaagccgtgc gcggcgaagg cggcattctg accaaccaat
     2101 cgggcgaacg gtttatgccg cattacgacc tccgtgccga actcgcaccg cgcgacatcg
     2161 ttgcccgcga catcgccgcc gaaattgcca aacaaacgca agacttcgtc tcgctcgata
     2221 tcagccatca acccgcagcg ttcgtccgtc agcatttccc gtccatccat cggcactgcc
     2281 tgtcccaatg cggcttggac atcacgcgcc aagccatccc cgtccgcccc gtgcaacact
     2341 acacctgcgg cggcatccaa accgaccctt gcggcagaac ctccctgccg cagctctacg
     2401 ccttaggcga aaccgcctgc acagggctgc acggagccaa ccgcctcgcc agcaattccc
     2461 tgctcgaatg cgtcgttacc gccagacttg ccgcccaaac catcgcggac ggacaagcat
     2521 tccaaaccgt accgtcccaa aggtcgtctg aacacccctc cgccgaagca ggcatctttt
     2581 cagacggcat ccaaagcgca ttcagccgcc ccgtcctgca agccttcaac caacgccatc
     2641 tgggcatcct ccgcaacgat accggcctgc accgcgccat cgcccaactg cggctttgga
     2701 agcaaaacca aaccgaaccg cacaccgcgt ccgaatacga aaaccgcaac ctgctcgaat
     2761 gcagcctcgc cgtcgcccaa gccgcataca ggcggagaca gaacatcggc gcgcatttta
     2821 atagtgattg ttaaggttgg ctggttagaa aaaaatcgtt caaataaatt tgaatagcat
     2881 ggttgagaaa ttggcattca gtttttaggg ttgcgtaagt tgggttatca atctg
//
LOCUS       DAWEYF010000189         2901 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.189, whole genome shotgun sequence.
ACCESSION   DAWEYF010000189 DAWEYF010000000
VERSION     DAWEYF010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.189"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            30..1247
                     /locus_tag="WGN93_001869"
     CDS             30..1247
                     /locus_tag="WGN93_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0227729.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTAIAIIGLANIAGCVF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            complement(1450..1590)
                     /locus_tag="WGN93_001870"
     CDS             complement(1450..1590)
                     /locus_tag="WGN93_001870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227730.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1603..2731
                     /locus_tag="WGN93_001871"
                     /pseudo
     CDS             1603..2731
                     /locus_tag="WGN93_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
BASE COUNT          677 a          861 c          690 g          673 t
ORIGIN      
        1 gcaaacttaa ccgactcaaa atacacatta tgacgcacac cgcatcgaaa acacccaaat
       61 tttggctgac catcaccgcc gccgcattca tcctgctgat taccatcggc atgaggatga
      121 cgctcggact gttcgtccaa cccgtcgtca acaccaccga attgagcatt gcccaattca
      181 gcctcatcat cgccgttttc caactgatgt ggggcatatc gcaaccattg tccggcgcgc
      241 ttgccgaccg tttcggcgcg ttcagggtat taagcggcgg cgccgtcctg ctcgtctgcg
      301 cctgcctgat tgcccccaac atcccgactt attgggggct gatgattgcc gtcgggctgc
      361 tgctcgcatt cggcaccggt tccggcggtt tctccatcat tatggggcag gtcgccgccc
      421 aagtccccgc acacaaacgc ggcttggcat ccggactggt caacgccggc ggttcggcag
      481 gacaattcct gttcgcaccg ctggttcaag gactcgtcgt cctgcccgaa gtcggctgga
      541 cgggcacatt ttacgtttgg ggcgcaatcg ccctgctgat tctgcctgtc tcatggtggc
      601 ttgccggcgg caacaacgcc gcccacaccc aacacgccca agccacacac ggacaaagcc
      661 tcggagaagc agtcaaaacc gccttcaaaa ccccaagcta catcctgctg cacctaagct
      721 tttttgcctg cggcttccac atcgcctttc tcgtaaccca cctacccacg gaagtcgccc
      781 tgtgcggact gcccgccacc gtcgcatcca cagccatcgc catcatcgga ctggcaaaca
      841 tcgccggttg tgtgttctca ggctggtgca caagccgcgt tcggggcaaa tacgtcctgt
      901 tcggactgta cgcctcgcgc gccgcgatga tactcatcta cattttttcg cccaagaccg
      961 acctcaactt ctacattttc gccgccgcac tcggatttac ctggctcgcc accgtcacgc
     1021 cgaccgcctc cattaccggc aaactcttcg gcacacgcta cctcgccacc ctgttcggac
     1081 tgacgatgct cagccaccaa atcggcggat tcctcggctc gtacatcggc ggcatcgtga
     1141 ttacacaatt cggcgactac ggctggatgt ggtacgccga cgcactgctg gcgggaaccg
     1201 ccgccctcct caacctcccc atccgcgaac cccgaaccgc cgcatgaaag aatgccgtct
     1261 gaaaaccctc agacggcatt ttccaaacac cccgcccgtt tccggactgc acgacacgca
     1321 aatcagcctt atcaaaccgc aaacaaccgc cgcgattaaa ccgccattca aataagtccg
     1381 ttttcccttc gggtgtaaaa tcatcacaaa acgcgatact gtatatcgcc gggcgttatg
     1441 cagcggattt caggataaaa tgccgtctga agccgcccct gcccgggcgg gcgaagcgtc
     1501 ggatgcggtg cgcttggcaa aggtttgccc gccgcgcccc gtatccggca tttcatcaat
     1561 gcagaccgca tttccaatcc tataattcaa ggtgtccgcc ttatgaaaat cgtttttatc
     1621 acaacagtcg catccagcat ttacggtttc cgcgcccccg tcattaaaaa attaatcggc
     1681 aaaaaccatc aggtgtatgc ctttgtatcg gagttttccg ataatgaatt ggatattatc
     1741 agggaaatgg gggttacacc cgttacctac cgttcaaacc gcagcgggct gaacccgttt
     1801 tccgatataa aatccacctt cctcatcttt aaagaactca aaaaaatatc gccggatttg
     1861 gttttccctt atttcgcaaa acccgtgatt ttcggcactt ttgccgcaaa actggcaggc
     1921 gtgcccagaa tcgtcgggat gctggaaggt ttgggattcg catttacccc gcagccggaa
     1981 ggcataccgt taaaaacaaa aatcataaag gggattttga ttgccttgta ccacattgcc
     2041 ctgccgatgt tggaaagcct gattgtatta aaccccgacg acaaagacga actgacggac
     2101 aaatacggca tcaaaataaa aaacatccat attttgggcg gaatcggtct ggatttgcgg
     2161 caatatcctt attccgaggc ggatattccc gatgaaaaag aacccgtaaa atttctcttt
     2221 atcggcagat ttctgaaaga aaaagggatt gatgatttta ttcgggcggc ggaacaggtt
     2281 aagggcaaat accccgatac ggtttttacc gctttgggcg caatcgacaa atcacgcggg
     2341 gggggggggc gatttggaac ggcttgccgc ccgcgatatt atccgtttcc ccggttttgt
     2401 gaacaatgtt tccgaagtga taaaggcgca tcatatattc gtattgccgt cttataggga
     2461 aggcgttccc cgaagcactc aggaggcaat ggccgtcggc agggcggtga ttacgacgga
     2521 tgtccccgga tgcagggaaa cggtcgccga caaggtcaac ggcttcctga tcgaaccttg
     2581 gaatccccgc atcttggccg aaaaaatgat ttattttatc gaaaacaggg aagccgtccg
     2641 cctgatgggg aatgcaagtt atgcgattgc caaagataaa ttcgatgccg aaaaagtcga
     2701 tttgaaattg ctcgatattt tgaaggcgta aacaaggctg cccgcttttg agtttcggtc
     2761 atttctgata aacccccgtc attcccgcca cacccccgtc attccctcga aagcgggaat
     2821 tcaggttcgt ttagtttcgg tcatttccga taaattcttg caactttgcg tttctagatt
     2881 cccactttcg tgggaatgac g
//
LOCUS       DAWEYF010000190         2866 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.190, whole genome shotgun sequence.
ACCESSION   DAWEYF010000190 DAWEYF010000000
VERSION     DAWEYF010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.190"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(81..557)
                     /gene="greA"
                     /locus_tag="WGN93_001872"
     CDS             complement(81..557)
                     /gene="greA"
                     /locus_tag="WGN93_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ0227731.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            952..2253
                     /gene="aroA"
                     /locus_tag="WGN93_001873"
     CDS             952..2253
                     /gene="aroA"
                     /locus_tag="WGN93_001873"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ0227732.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYRLHGVARMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGERQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2296..2829)
                     /locus_tag="WGN93_001874"
     CDS             complement(2296..2829)
                     /locus_tag="WGN93_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ0227733.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          604 a          791 c          771 g          700 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat aatttcctgc gtgtgtcggg
       61 tgtatcgaaa tcaagccgaa tcaaatatat cggacttcga taatgtcgta ttcgcgcacg
      121 ccgcccgggg cttggacttc cgccgtatcg ccctcttcct tgccaattaa ggcgcgggca
      181 atcggtgagc cgacatagat tttgccctgt ttgatatccg cttcgtcttc gccgacaatt
      241 tggtaggtaa cgtgttcttc cgtttccaaa tcttccagcg taaccgtcgt accgaacacg
      301 attttgcctt cggcgtggat ttcggtcgga ttgatgatgt gggcaacgga aagtttgtgt
      361 tccaactcgg aaatgcggcc ctcgataaaa ccttggcgtt ctttggcggc ttcatattcg
      421 gcgttttcgg acaaatcgcc gtgcgatctg gcttcagcaa tcgcttcgat cacttcgggg
      481 cgcgccacgc ttttaagctg ctgcaattcc tgtttcagca attccgcacc gcgtacggtc
      541 agggggattt tttgcatcgg tcttttttct ccatattccg gcacaccggt ttgcggcagc
      601 aaacataccg cataccgtct tgttttgtgc gtccggatat taaaataaaa acacaagccg
      661 cccggaaaat cggcggcttg tctgtcgttg aacagcggct attctaccaa attctatgaa
      721 attggcaatc gtaccgtacc gtccgcaaac gtcatctgtc cgcaacaaaa gccgaaaata
      781 tgccggcaaa aaaattttag aaacaaaaaa tttaaaaata atcaattttc ggcataaaaa
      841 accacattta cggactttaa aaccgaaaat gccaaacctg agatttttca tacagcattt
      901 gcaccagtat aatgcaggct gtttttatct ttataatatt gacgttttgc catgaccgaa
      961 tccctccgcc tccctgccgc ctcgctcaaa ccttccactg tcgccctgcc cggctccaaa
     1021 agcatcagca accgcaccct gctgcttgcc gccttgtccg acaatgcttg cgaaatccat
     1081 tccctgctca aatccgacga taccgaccgt atgctcgaag cactcgataa actcggcgtt
     1141 gaaatcgaat atcttgccga agaccgtctg aaagtgcacg gcacaggcgg acgcttcccc
     1201 aaccgcactg ccgatttgtt tttgggcaac gcgggcacgg cgttccgccc gctgaccgcc
     1261 gcgcttgccg ttttgggcgg cgattatcgc ctgcacggcg ttgcgcgtat gcacgaacgc
     1321 cccatcggcg atttggccga tgcactgcgg attgccggcg ccgatgtcga atatctcggc
     1381 aaggaacact atccgccgct tcatatcggc gaacgccaag acaacggcga gcgcgtgatt
     1441 ccgattaaag gcaatgtgtc cagccagttt ctgaccgccc ttttaatggc gttgccgctg
     1501 accgggcagg cgtttgaaat ccgtatggtc ggcgagttaa tttccaagcc ctatatcgac
     1561 attactttaa aactgatggc gcaattcggc gtacaggttg ccaatgaaaa ctaccgcgtc
     1621 ttcaaaattc ccgccgatgc gcactaccac gcgcccgaac acttgcacgt cgaaggcgat
     1681 gcctccagcg cgtcctactt cctcgcagcc ggtttgattg ctgccacgcc cgtgcgcgtg
     1741 accggcatcg gcgcaaacag catacagggc gatgtcgcct ttgcccgcga gctggaaaaa
     1801 atcggggcgg acgtggtttg gggcgaaaac ttcgtcgaag tttcacgccc gaaggaacgt
     1861 gccgtccaat cctttgattt ggatgcgaac catatccccg atgccgccat gaccctcgcc
     1921 atcgtcgcgc ttgctacagg gcaaacctgc acgctgcgca acatcggttc gtggcgcgtc
     1981 aaagaaaccg accgcatcgc cgcgatggca aacgagttgc gcaaactcgg ggcaaaagtc
     2041 gtcgaagaag ccgaagcaat tcacatcacc ccgcccaaaa cgctgacacc cgacgccgtc
     2101 atcgacacgt acgacgacca ccgcatggcg atgtgtttct cgctggtttc gctgttgggc
     2161 gtacccgtcg tcatcaacga tccgaaatgc acccataaaa ccttcccgac ttatttcgac
     2221 gtgttctctt cactgaccga aacaacggaa taaggcggca ttttgccgcg attccggcgc
     2281 ggcgcggcgg gcggctcatt ctgtaaagaa agtatgtgcg ccgaggtagt ttttggcgta
     2341 aaacggtgtg gagagttttt cggttttgat ggttttgccg ctgctggggg catggatgaa
     2401 ttcgccgttg ccgatataga gtccgacgtg tgagtagcgg tgtgtgccgc cggtgttgaa
     2461 gaatacgagg tcgccggcct taaggcggct gtcggggatt ttgcggcttg ccgccgccat
     2521 gtcgcgggcg gtgcgcggca gcttgacgtt gagggcgttt ttgtaaacga attgaatcat
     2581 gccgctgcaa tcgaagccgg ttgcggtgct gctgccgccc catttgtagg gcgtgccgat
     2641 gagtccgagg ctgtggagca tgagttcctg cgagccttgt gtgcggtcga tgtggctgat
     2701 gcggacggct tggatttgcc ggactgtctg tttgggtttc ggttggcggt gtttgccgga
     2761 ggtcgtgccg catgaggcga ggagcagtgc gctgagacag aggaaaaggg ttttgtcggg
     2821 gggaaacatg gtttttcctt tgcgggttcg gatatccgtc tgaagg
//
LOCUS       DAWEYF010000191         2652 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.191, whole genome shotgun sequence.
ACCESSION   DAWEYF010000191 DAWEYF010000000
VERSION     DAWEYF010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.191"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..378
                     /locus_tag="WGN93_001875"
     CDS             <1..378
                     /locus_tag="WGN93_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227734.1"
                     /translation="PANAHECKHLPPLLEGIAEGTTVYADKGYDSAENRQHLKEHQLL
                     DGIMRKACRNRPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQ
                     SHLKAMCLNLLKAANRLSAPAAA"
     gene            complement(653..1081)
                     /locus_tag="WGN93_001876"
     CDS             complement(653..1081)
                     /locus_tag="WGN93_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ0227735.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(1062..1496)
                     /locus_tag="WGN93_001877"
     CDS             complement(1062..1496)
                     /locus_tag="WGN93_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ0227736.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTDKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLCRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKASGDDGVRKS"
     gene            complement(1669..2085)
                     /locus_tag="WGN93_001878"
     CDS             complement(1669..2085)
                     /locus_tag="WGN93_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227737.1"
                     /translation="MSGEKSENLPADEQQKMLQEFLELQKQDIAVKQKELESRKDEIQ
                     SHERIALATIEAQKQGEQQHGEIFKEVHKRRLNAVIAISFLIAAVLITALWRDKDSVA
                     IEIVKIGGAVALGYFAGINRGKAQTLEKQRREKDSD"
     gene            complement(2082..2273)
                     /locus_tag="WGN93_001879"
     CDS             complement(2082..2273)
                     /locus_tag="WGN93_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227738.1"
                     /translation="MNTVKEYTAVRERLLNAADYLEEVRKDRKTGNIASVEFVPPKIG
                     ARGYGKFKVRYKTLVAVDL"
BASE COUNT          698 a          698 c          554 g          702 t
ORIGIN      
        1 cccgccaatg cccatgagtg caaacacctg ccgcctttgc tggaagggat agccgaaggt
       61 acgaccgtct atgccgataa aggctatgac agtgcggaaa accggcaaca tctgaaagaa
      121 catcagttgt tggacggcat tatgcgcaaa gcctgccgca accgtccgct gacggaaacg
      181 caaaccaaac gcaaccggta tttgtcgaag acccgttatg tggtcgaaca aagcttcggt
      241 acgctgcacc gtaaattccg ctatgcgcgg gcagcctatt tcgggctgat taaagtgagt
      301 gcgcaaagcc acctgaaggc gatgtgtttg aacctgttga aagcggccaa caggttaagt
      361 gcgcccgctg ccgcctaaaa ggcagcccgg atgcctgatt atcgggtatc cggggaggat
      421 taagggggta tttgggtaaa attaggcggt atttggggcg aaaacagctg aaaacctgtg
      481 ttggggtttc ggctgtcgtg agggaaagga attttgcaaa ggtctcaaca tttgaaaacc
      541 ccattaaacc gtctttaacc catcgtcccg aacggtagat gtttcatccc ctgcgaacca
      601 aaaaaaagac cgtctgaata cagacggcca aagcctggtc acacatcact gcctaaaata
      661 aagctgcctg ctgtgccgca ggtcggctca tttcattgat aatcgtatat cccgttcgtg
      721 aagagatgcc gtatttaggg catagcttcg tcatcgccat aagcccgctc tccttatcaa
      781 tatcgcgcaa tttgacaaac tcctgataaa acctatggtt tctcaactgt attaacgcct
      841 tgccgcaccg tgggacatac aattcctcgc caccatatac ctgcaacagc tcatgtgttt
      901 tcacttcgcc gatggcttcg accaaaattg ccaaacgctc ggtgtccacc ttgcccttac
      961 caaatttaaa ccgcgccccg ccaatcgcct tgaccagctg ttccgtcgct gccagtccga
     1021 tgacatccac aatgtccaac acggtatccg gcaataaatg ttcaactttt tcgaacccca
     1081 tcatccccac tcgctttttc cgttttcctg ttttccgcaa tctgcaacgc agcaaccagt
     1141 ttatgtagct gcgtatcgtc taaatattcg accttatcct taccaaacat ccgccgcgcc
     1201 attgcgtgtg catagttcca atgtttgccg ccgacggtca gcagggcttc gactttgtcc
     1261 aacattgccg ctgatgatgt ccgacacaga tgcggtttgc cgtgtgggtt accttttgct
     1321 ttaggcttaa atccgtgcga ccgcatatca gcgacaacag actcaagttc agaaacatcc
     1381 atatccgcac acgaccgctt atccgtcaca cgctccaaca ccgcgcgata ggtaccgtca
     1441 tccaagccca gctccttttg agcaatctta attttcgcaa tcaacgcccg gcgcattatc
     1501 tctccaatac aacatatagt ataaattagc gcattttata caataaaata caatatatag
     1561 tattaagccg atgttttttt gcgaaacgga cagacataaa aaatgccgtc tgaaaacgag
     1621 ctttgcgagt ttcgccaaaa cgtttcagac gacctttttt actacaatct aatcactgtc
     1681 tttttcgcgc cgttgctttt ccaaggtttg cgctttacct ctgttgattc ctgcaaaata
     1741 tcccaaagct accgccccgc cgattttgac aatttcaata gcgacgctgt ccttatcgcg
     1801 ccataacgca gtaatcagca cggcggcaat cagaaaagaa atagcaatca cggcattcag
     1861 acggcgtttg tgtacctctt tgaaaatctc accatgttgc tgttcaccct gtttttgcgc
     1921 ttcgatggta gccagtgcaa tgcgttcgtg agattggatt tcgtccttac ggctttccaa
     1981 ctccttctgt ttgactgcaa tatcctgttt ttgaagttct aaaaactcct gaagcatttt
     2041 ctgctgctca tcggccggca gattctcgga tttttccccg ctcataaatc aaccgccact
     2101 aaggttttgt aacggacttt gaatttgccg taaccccgag cccctatttt cggcggcaca
     2161 aattccacgg acgcaatatt gcccgtctta cggtctttac ggacttcttc caaataatcg
     2221 gcagcattga gcagccgttc gcggactgcc gtatattctt tgacggtatt catttttcaa
     2281 cctcgcccaa atagtgcaaa tattagcata tgggatttat ttttcaagaa aatcaaatcc
     2341 atataaaaca accgtataat attttaatac tatatatggt aaatttcttc taaaaataca
     2401 cactaaaata ccatatcttg ataaccgcaa cgccgcacaa atggcagggc attgatgccc
     2461 gacaacaaaa aatgccgtct gaaacagcat tcgagctgtt ttcagacggc atttttcttt
     2521 gattttgttg gggaaagggt tgacttttaa cgtgtccacg tttataattc aattcatcgg
     2581 cgtagtgagg gccgatacgg gaaaagcccc accgaagcgg ggctcaactg ggagaaagaa
     2641 gatgaataaa cg
//
LOCUS       DAWEYF010000192         2595 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.192, whole genome shotgun sequence.
ACCESSION   DAWEYF010000192 DAWEYF010000000
VERSION     DAWEYF010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.192"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            35..1390
                     /locus_tag="WGN93_001880"
     CDS             35..1390
                     /locus_tag="WGN93_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ0227739.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1394..2413
                     /locus_tag="WGN93_001881"
     CDS             1394..2413
                     /locus_tag="WGN93_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ0227740.1"
                     /translation="MSDTPATPATRDFGLIDGRAVTSYVLSNRRGTRVCVLDLGGIVQ
                     EFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEAN
                     EGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDR
                     LTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDL
                     EVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDR
                     NGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTREATIAYG
                     IESLS"
BASE COUNT          480 a          699 c          772 g          644 t
ORIGIN      
        1 actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc ctcaaacagc
       61 aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt tcggctttct
      121 cggcgttcag acggccttta ccctgcaaag ctcgcaaatg agccgcattt ttcaaacgct
      181 aggcgcagac ccgcacaatt tgggctggtt tttcatcctg ccgccgctgg cggggatgct
      241 ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt tgggcggccg
      301 ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga ttttgatgcc
      361 gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt tcggcgcgct
      421 gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta agatgatggt
      481 cggcgacatg gtcaacgagg agcagaaagg ctacgcctac gggattcaaa gtttcttagc
      541 aaatacgggc gcggtcgtgg cggcgattct gccgtttgtg tttgcgtata tcggtttggc
      601 gaacaccgcc gagaaaggcg ttgtgccgca gaccgtggtc gtggcgtttt atgtgggtgc
      661 ggcgttgctg gtgattacca gcgcgttcac gattttcaaa gtgaaggaat acgatccgga
      721 aacctacgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag ccaactggat
      781 cgaactcttg aaaaccgcgc ctaaggcgtt ttggacggtt actttggtgc aattcttctg
      841 ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg aaaacgtctg
      901 gcacaccacc gatgcgtctt ccgtaggtta ccaagaagcg ggcaactggt acggcgtttt
      961 ggcggcggtg cagtcggttg cggcggtgat ttgttcgttt gtattggcga aagtgccgaa
     1021 taaataccat aaggcgggtt atttcggctg tttggctttg ggcgcgctcg gctttttctc
     1081 cgttttcttc atcggcaacc aatacgcgct ggtgttgtct tataccttaa tcggcatcgc
     1141 ttgggcgggc attatcactt atccgctgac gattgtgacc aacgccttgt cgggcaagca
     1201 tatgggcact tacttgggcc tgtttaacgg ctctatctgt atgcctcaaa tcgtcgcttc
     1261 gctgttgagt ttcgtgcttt tccctatgct gggcggcttg caggccacta tgttcttggt
     1321 agggggcgtc gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag aaacacacgg
     1381 cggggtttga gcgatgagcg atacccccgc tacccccgct acccgcgatt tcggcctgat
     1441 cgacgggcgt gccgtaacca gctatgtgct gtccaatcgg cgtggtacgc gtgtctgcgt
     1501 gctggacttg ggcgggattg tgcaggaatt ttccgttttg gcagacggcg tgcgcgaaaa
     1561 cctcgtggtg tcgttcgacg atgcggcttc ctatgcggac aatccgtttc agattaacaa
     1621 gcagataggg cgcgtggccg gacgcatccg cggtgcggcg ttcgacatca acggcaggac
     1681 ttaccgcgtg gaggccaacg aaggcaggaa cgcgctgcac ggcggttcgc acgggctggc
     1741 cgttacccgt ttcaacgcgg tggcggcaga cggccgttcg gtggtgctgc gcagccgcct
     1801 gcaacagtcg gccgacggtt atcccaacga tttggatttg gatatttcct accgcttgga
     1861 cgaggacgac cggcttaccg ttagctatcg cgccaccgcg ctcggcgaca cggtgttcga
     1921 cccgacgctg cacatttact ggcggctgga cgcgggcctg cacgatgcgg ttctgcatat
     1981 tccgcagggc ggacatattc cggccgatgc cgaaaaactg cccgtctcaa cggtttcaga
     2041 cgacctcgaa gtatttgatt tcagccggcc caagccgctg gatgccgccg ttgccgccct
     2101 gcgccgcgaa acgggtcggg ccggttttga cgacgcttac cgcgtgccgt ccgatatagg
     2161 ccgtcccgcc gctgtgttgc aagccggacg ccgccgtcgt atcagcatat acagcgaccg
     2221 caacggcttg gtcatcttta ccgccgcccc gcaggatttc gcgcggcacg atgcgggcgt
     2281 ttacgacgcg ctggcgaccg aggcgcagac gctgcccgac agcctgaatt ggcccgagtt
     2341 cggcaatatt cgtctgaaca agggtgatac tagggaggcg acgattgctt acggcatcga
     2401 atccctttct taggagcttc ctaacaccgg ttgcagacgg cctttttata gtggattaac
     2461 aaaaaccggt acggcgttgc ctcggcttag ctcaaagaga acgattctct aaggtgctga
     2521 agcaccaagt gaatcggttc cgtactattt gtactgtttg cggcttcgtc gccttgtcct
     2581 gatttttgtt aatcc
//
LOCUS       DAWEYF010000193         2583 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.193, whole genome shotgun sequence.
ACCESSION   DAWEYF010000193 DAWEYF010000000
VERSION     DAWEYF010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.193"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            32..511
                     /locus_tag="WGN93_001882"
     CDS             32..511
                     /locus_tag="WGN93_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ0227741.1"
                     /translation="MPSETAVADIARTYSAHYLNPNNRNMTLFPDALPCLDKLKAQGY
                     WLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGLCGELGFDPKEA
                     LVVGDTAHDLHMAANAGAAAVGVATGAHSREQLRTAPHLAVLDGLSELPGFLAQHYA"
     gene            complement(598..1566)
                     /gene="ispH"
                     /locus_tag="WGN93_001883"
                     /gene_synonym="lytB"
     CDS             complement(598..1566)
                     /gene="ispH"
                     /locus_tag="WGN93_001883"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ0227742.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAEERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1595..2092)
                     /locus_tag="WGN93_001884"
     CDS             complement(1595..2092)
                     /locus_tag="WGN93_001884"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ0227743.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKH"
     gene            complement(2298..2402)
                     /locus_tag="WGN93_001885"
                     /pseudo
     CDS             complement(2298..2402)
                     /locus_tag="WGN93_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          589 a          790 c          621 g          583 t
ORIGIN      
        1 cctgcccgaa atcatccgcg acctgctcga aatgccgtct gaaaccgccg ttgccgacat
       61 cgcgcgcact tattccgcgc attacctcaa tcccaacaac cgcaatatga cgctctttcc
      121 cgatgccctg ccctgtctgg acaagctcaa agcacaagga tactggcttg ccgtcgccac
      181 gggcaaaggg cgggcgggct tggacaacgc catcagccaa accgccaccg gcggctattg
      241 gctcgccacc gcctgcgcgg gggaatatcc gtccaaaccc tcgcccgaaa tggtattcgg
      301 actctgcggc gaactggggt tcgacccgaa agaggcattg gtcgtcggcg atacggcgca
      361 cgacctgcat atggcggcaa acgcaggcgc ggcggcagtc ggcgtggcca ccggcgcaca
      421 ttcgcgcgaa cagctccgca ccgcaccgca tctcgccgta ttggacggtt tgtccgaact
      481 gcccggtttt cttgcacagc attacgcctg attggtttcc gcatcagaca ctcaaaacaa
      541 atgccgtctg aagcctgttc agacggcatt tgtgttgccc aaacattcaa cgcttgctca
      601 acgtttgcac aaatcgggtt tggtttcgcc ctcgcggcgc agctctttgg gcaggacgaa
      661 cacaatgctt tcttccgcac cctcgccttc gcgtacggtt tcgtgccccc atccgcgtat
      721 ggttgccagt acttcccgca ccaacacttc gggcgcggac gcgcctgccg ttacgccgac
      781 tttgtttttg ccctcaaacc atgcacgttg caggtagcct gcattatcca ccatatacgc
      841 atcgattccg cgcgatgccg ccacttcgcg caagcggttg ctgttggacg aattgggcga
      901 accgaccaca atcacgatgt cgcactgttc cgccaactct ttgacggcgg tttgccggtt
      961 ggtcgtcgca tagcagatat cttccttgtg cggattgcgg atattgggga aacgcgcgtt
     1021 cagcgcggcg atgatgtctt tggtttcatc gaccgagagc gtggtttggc tgacataggc
     1081 gagtttgtcg gggtttctga cttcgagttt tgccacatct ccgaccgttt cgaccaaaag
     1141 cattttgccc ggcgcaagct gccccatcgt gccttcgacc tcgacgtgcc ccttatgccc
     1201 gatcatgatg atttcacagt cttgggcatc cagtcgggcg acttccttat gcactttcgt
     1261 caccagcggg caagtcgcat caaacacgcg gaaaccacgt tcctccgctt cttgctgcac
     1321 cgccttcgat acgccgtgtg ccgaataaac cagtgtcgcg cccggcggca cttccgccaa
     1381 gtcttcaata aacaccgcac ctttttcacg caggttgtcc acgacgaatt tgttgtgaac
     1441 gacttcgtgg cgcacataaa tcggcgcgcc gaactcttcc aaagcacgtt cgacaatact
     1501 gattgcccga tccacaccag cgcagaagcc gcgcggattg gcaaggatga tggttttctc
     1561 gttcataagc ccggtatttc gttttcagac ggcatcaatg tttttcttct tgggttttac
     1621 ggtggacgat gttgtccaac actgccaaca ccgcaccgac gcagataaag ctgtcggcaa
     1681 tattaaaggc gggataaaac caattttgcc aataaaacaa taagaaatcg acgacatgac
     1741 cgtgtatcag gcggtcgatg acattgccta acgcaccgcc gataatcatc gccgcacccg
     1801 ttttgccgag ggttgcaaac tcatcgcgca agatggcgcg taccaaatac gcgctcaccg
     1861 ccaccgccag caccaaaaaa aagtattttt gccagccgcc ctgatcggca aggaagctga
     1921 acgccgcgcc cgggttgtac accaaggtca gatcgaaaaa cgaaggaatg acattgacgc
     1981 gttcccgata ctgaaacgac gacagcaccg cccacttcga ccactggtcc agcacgatgg
     2041 cggcaagtgc caatacccaa tagcgcgttt tacttgaaac agatgaagac atatttttca
     2101 acagccggta aaagagtacc attttacccg aaaaccccct ttcctgtacc cgaaacggca
     2161 aatgccgtaa tcttaaaacc cgtcattccc gacaacaccg taatctcgaa acccgtcatt
     2221 cccgcgtagg cgggaatcca gacctgtccg cacagaaact tatcggataa aaacagttgc
     2281 ccaaaccccg cgttctatag tggattaaat tcaaaccagt acggcattgc ctcgccttgc
     2341 cgtactattt gtactgtctg cggcttcgtt gccttgtcct gatttaaatt taatccacta
     2401 tagattccca cttccgtggg aatgacggtt cagttgcatt ccgacaacac cgtaatcttg
     2461 aaatccgtca ttcccgcgca ggcgggaatc tatcggaaat gactgaaacc tcgagattct
     2521 agattcccac tttcgtggga atgacggttc agttgcgttc caacaacacc gcaatctcga
     2581 aat
//
LOCUS       DAWEYF010000194         2581 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.194, whole genome shotgun sequence.
ACCESSION   DAWEYF010000194 DAWEYF010000000
VERSION     DAWEYF010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.194"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(197..268)
                     /locus_tag="WGN93_001886"
     tRNA            complement(197..268)
                     /locus_tag="WGN93_001886"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(233..235),aa:Arg,seq:cct)
     gene            complement(288..734)
                     /locus_tag="WGN93_001887"
     CDS             complement(288..734)
                     /locus_tag="WGN93_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ0227744.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(739..1713)
                     /gene="ispB"
                     /locus_tag="WGN93_001888"
     CDS             complement(739..1713)
                     /gene="ispB"
                     /locus_tag="WGN93_001888"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ0227745.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVAVISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVAALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1937..2245
                     /gene="rplU"
                     /locus_tag="WGN93_001889"
     CDS             1937..2245
                     /gene="rplU"
                     /locus_tag="WGN93_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ0227746.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2270..2542
                     /gene="rpmA"
                     /locus_tag="WGN93_001890"
     CDS             2270..2542
                     /gene="rpmA"
                     /locus_tag="WGN93_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ0227747.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          756 a          696 c          574 g          555 t
ORIGIN      
        1 cataaaacaa cagatttcca agccggaaca tcttttacgg agcctgaaaa tcatttcatg
       61 attctaccgt cctaaaggtc ggtttttcaa gcaggaagaa aaagttttca gatggcaaaa
      121 aagccctcca acactgaaag gccttatatc ggaaacttcc cgcaacacgg gaaacagaca
      181 aatgcaaatc gtcaaacctc gccaacagga atcgaacctg tattttacgc ttaggaggca
      241 tacgttctat ccgttgaact atggcgagcc gaaatgaaaa ggagatttta accctttccg
      301 acgacaaaag acaagatgcc ggccgcaatc agcggcccga cagggatacc gcccataaat
      361 gccaccccga taaccgtccc gattaacagc cctgtaatta aaacaggctg ctgtcccatc
      421 aaaggcacgc cgcgtcccgc cagccaagcc acgaaaatac cgataaaaac ggcggatatc
      481 attttaaaat tcaaaaattc ggcaacggga ggaacctgcg cctttcctga aaccaacgga
      541 ctcaaaaccc ctatggtcaa aagaatgata ccgagattca acccgtgctt ctcgaccaac
      601 gggacaaact gtaccaatgc cgtctgctgc atcagcagca atatggttgc cgagatggta
      661 atcgaattgt tgttgctgac cacccccaac agaatcagcg taaccagaaa caggggaaca
      721 aaactgaaat tcatcgcctc aagacaccct gaccaaagat tccttcgcca gctgaatcat
      781 ggcatccttc acttcgctgt cgggcagggc atccaacgcg gcaacggcac aatcgactgc
      841 tttgcgcgcc tcgcctatcg aatatgccaa agcatccgaa cggacgacat aatcgtggat
      901 tttctcaaaa tagctgcgat ctgcattttc caaagcagta cgcacatcgt tcgcaacctg
      961 ttcggaaccc tgacgcatca gataaatcaa aggcaaagtc ggttttcctt ccgccaaatc
     1021 gtcgccgacg tttttgccgg tttcttcggt ttcgccagaa tagtccagca catcgtcaat
     1081 aatttggaat gccgtaccga catacatacc gtagtctttc aacgcccgtt cgtgttcggg
     1141 ggaagccttg cccaaaattg cgccgacttg agcggcagct tcaaacaatt ttgccgtttt
     1201 atattggatg acttggatat attgttcttc ggtaatgtcc gtattgccga tgttcatcag
     1261 ctgcatgact tcgccctcgg caataatgtt ggttgcatcc gccatcactt ccaaaacgcg
     1321 catactgccc gaggcaacca tcagttgaaa ggcgcgcgtg tataaaaagt cgccaaccaa
     1381 cactgccgcc gcattgccga acagattgtt tgccgttgcc cgcccacggc gcaaatcgct
     1441 ttcatcgacg acatcgtcgt gcaggagggt ggaagtgtgg ataaactcga ccatcgccgc
     1501 cagcgaatac agtttctcgt catcataacc gaccgcctta cccgccaaaa tcgtcataat
     1561 cggacgcagg cgtttgccgc ccgcgctgat gatatatgta ccgatttgcg aaatcactgc
     1621 gacatcggat tgcaccgcac ggttgatgac ttcattgact ttggcaaggt cttcaggcag
     1681 atgtcgctgg aaatagggca gattctcgag catggcagac tctcaggttt acgtttccgt
     1741 caaacggcag ataccgcttg aaagctgatt caaatagcgg gcaattatat cagcaaagct
     1801 atgaggacac atcttttcag acggcatatg gttatccgaa ccgcgcaaac tttgacaaaa
     1861 caggcaaata acaatacaat gccgagttcc gcacaatggt gtgcggatat taaccataac
     1921 ccttatggag ttgagtatgt acgcggtcgt aaaaaccggc ggcaaacagt ataaagtttc
     1981 cgtcggcgaa aaattgaaag tagaacagat accagccgaa ctcgacagcc aaatcgaact
     2041 gaccgaagtt ttgatgattg ctgacggcga atctgtaaaa gttggcgcac cctttatcga
     2101 aggtgcaaaa gtaacggcta aagtagtggc acacggtcgt ggcgaaaaag tccgcatctt
     2161 caaaatgcgc cgccgcaaac actaccaaaa acgccaaggc caccgccaaa atttcaccca
     2221 aatcgaaatc gtggcaatcg cctaacctta aaacttagga gcattacaaa tggcaagtaa
     2281 aaaagcaggc ggcagcaccc gcaacggtcg cgattcagaa gccaaacgct tgggcgttaa
     2341 agcctacggc aacgagctga ttcccgcagg ttccatcatc gtacgccaac gcggtaccaa
     2401 attccacgca ggcgacaacg taggtatggg caaagaccac actttgttcg ccaaagttga
     2461 cggttatgtc gaattcaaaa ccaaaggcgc gctgaaccgt aaaactgtca gcatccgtcc
     2521 ttacactggt tctgaagaat aatccaaccg atacctgaag ccgcatcttt tcacgatgcg
     2581 g
//
LOCUS       DAWEYF010000195         2581 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.195, whole genome shotgun sequence.
ACCESSION   DAWEYF010000195 DAWEYF010000000
VERSION     DAWEYF010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.195"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            93..1496
                     /locus_tag="WGN93_001891"
     CDS             93..1496
                     /locus_tag="WGN93_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ0227748.1"
                     /translation="MNNPDLPYRQALECLSQKQYNFTEVRRLLTEAFSAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETA
                     HLLYRKAAAQGLAAAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDIYRYGLGMTSDKEKALHYYRQAAEAGSLAAYQKLISDSALNHPDQYGGIK
                     DSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDKEKACRYLQEAINNGY
                     GQKSVLQELLQQWQNAV"
     gene            1618..2334
                     /gene="trmB"
                     /locus_tag="WGN93_001892"
     CDS             1618..2334
                     /gene="trmB"
                     /locus_tag="WGN93_001892"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ0227749.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIDENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
BASE COUNT          729 a          786 c          605 g          461 t
ORIGIN      
        1 ttcgtcgcct tgtcctgatt tttgttaatc cactataaac ctaacttcat aacacaataa
       61 cgatgattcg acaaaacgga aaacgatctg acatgaacaa tcccgactta ccctatcggc
      121 aggccttaga atgcctgtct caaaaacaat ataactttac cgaagtccgc cgactgctga
      181 cagaagcgtt ctcggcaggt catcccgccg ccgcattcga gttggcaaaa cacctgatgg
      241 acgcggacag cccctaccaa gaccgcgaac aaggtatgga aatgctccgc atcgccgctg
      301 aacaggggca tccctatgcg cgttacaatc tggcatatat ccaagaattg gaaggcgcgc
      361 ccccggaaac cctgataccg ctttacagac cgttggcaga ggaaggactg cctgaagcac
      421 aagtccgcct gatgtacctt ctgtatgcgt cccgacattt tgaagaagcc ctgaaatggg
      481 caaaaacaag cgcaaaaaac aacaaccccc acgggcaata cctgcttgcc caatactgcc
      541 ggtacggcac gccgccggat tttgaaacgg cgcacctgct ctaccgcaaa gcggcggcac
      601 aaggcttggc ggcggcacac tggcagctcg ggctgcaata ccgtttcgga caagggacga
      661 aagtcgacac ggcacaggcc gtcaatcatt tgcgcgccgc cgcacaacaa ggatacattc
      721 ccgcctacac cccgcttgcc gagctcatcc tacctacggc tcctgatgaa gccgttcact
      781 ggtttcaaca ggcggcacag gaaaatgacc ccgatgccca tgccgcactt gccgacatct
      841 acctgcaagg caagcatccg gaaagaaact acaaacttgc cctgcatcac gccgaagcag
      901 ccgccgccga acgccatccc gaaggtttgc ggatactggg cgacatctac cgctacggac
      961 tgggcatgac ttccgataaa gaaaaagccc tgcattatta ccggcaggca gccgaagccg
     1021 gcagccttgc cgcgtatcag aaactcatat ccgacagcgc gttaaaccat cccgaccaat
     1081 atggcggcat taaagattcc gccatcaggc ggcaaagggc agaacggctt tatcaaaaag
     1141 cccaagccct gcattacgga ttacaatgcg cgcccgaata cgcagccgcg ctcaaactct
     1201 acacagaagc cgcagaactc ggacacagca aagcccaaac caatctgggc agcatgtatt
     1261 acttcggaca gggtatgacc gccgactaca atgaagcacg caaatggttt gaaaaagccg
     1321 ccgcaaaaaa agacagtatg gcgttctaca acctcgcctg catccattac agcggacacg
     1381 gtgtcgggcc ggacaaagaa aaagcctgcc gctacctgca agaagccata aacaacggat
     1441 acgggcaaaa aagcgtcctg caagaactgt tgcaacagtg gcaaaatgcc gtctgaacag
     1501 cgttacacct accctgccga aacgaaacag gtataatcgc ccctttccct tcccgccgtc
     1561 cgaacagaca tttcacattc agacggcatc ctgattgcac aagcgcatga aagcattatg
     1621 acagacaccg ccgaaaacca aacaccaaac gaccgtcaag ccggacaccc ccgcagcatc
     1681 cgcagcttcg tcctccgcca aagccatatg accgccgcgc agcaacgcgc catcgatacc
     1741 ttatgggaca gcttcggcat cgattaccaa gcaacaccgg ccgatcttga tgccaatttc
     1801 ggaagcaacc ggcccaaaat cctcgaaata ggcttcggta tggggacagc aaccgcagaa
     1861 atcgcccgca ggctgcccga aaccgacttt ctcgccatcg acgtacacgg tcccggcgtg
     1921 ggtaatctgc tcaaacttat agacgaaaac catttggaaa atatccgcgt gatgcggcac
     1981 gatgccgtag aagttgtcga aaatatgctg caagacggct cgctcgacgg catccacata
     2041 ttcttccccg acccgtggca caaaaaacgc caccacaaac gccgtctgat acaagccccc
     2101 ttcatcgcca aactgctgcc caaactcaaa accggcggct atatccacct ggcgacagac
     2161 tgggaagaat atgcacagca gatgcttgaa gtcctcagca gcttcgacag cctgcaaaat
     2221 acggcggcag actacgcccc caccccggac taccgccccg aaaccaaatt cgaagcgcgc
     2281 ggcaaacgcc tcggacacgg cgtttgggac ttggtattca aacggatcgg ataacaaacc
     2341 gccggataaa aaaatgccgt ctgaagcatg tttgcttaca aacggcattt tttcaagata
     2401 aagcagcgag tgatgtttcg atataaagtt caaagcaatg gtgcgaacag caaaacgcgt
     2461 gtgtaccgca cgcatccttg taggttttaa cctgcacatc ggttttaaag tttgtgccgc
     2521 ccgcaggtag tatgtgatag ctacgcacgc ggttggtgtg atgtaggcta cggcttgctg
     2581 g
//
LOCUS       DAWEYF010000196         2579 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.196, whole genome shotgun sequence.
ACCESSION   DAWEYF010000196 DAWEYF010000000
VERSION     DAWEYF010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.196"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            75..704
                     /locus_tag="WGN93_001893"
     CDS             75..704
                     /locus_tag="WGN93_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ0227750.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            850..2511
                     /locus_tag="WGN93_001894"
     CDS             850..2511
                     /locus_tag="WGN93_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ0227751.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPTAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENI"
BASE COUNT          507 a          653 c          671 g          748 t
ORIGIN      
        1 atggggttga agttgacatc tacaaagttt aatgtttgaa tacattaaaa aaatatattt
       61 gaatgagatg ttttatgatt caaaatgttg ttacttcaat aatcctgtat tctgggacag
      121 ccgtagactt acttattatc ctaatgttat tttttgccaa aagaaaaagc agaaaagaca
      181 tcattaacat ctatttagga caatttctag gctctgttag cctgatattg ctaagtttgc
      241 tttttgcatt tgtcttagat tatattccta gtaaagagat tttaggtttg ctcggcttga
      301 ttccaatttt cctaggcatc aaagttttgc tgttaggaga ttctgatgga gaggctattg
      361 ccaaagaggg tttgcgcaaa gataataaaa acctgatttt tctagtcgct atgattactt
      421 ttgcaagttg tggtgctgac aatattggtg tctttgttcc atattttact accttaaatt
      481 tagcgaattt gatagtggct ttacttacct ttctagtcat gatttatctc ttggtttttt
      541 ctgcccaaaa attagcacaa gtcccttctg ttggagaaac tttggaaaaa tatagcagat
      601 ggtttgttgc tgttgtttat ttgggattgg gggtatatat cctgattgaa aacaacagtt
      661 ttgatatgct atggactgtg tcgggccagg aaaaaatatt atgaaaaaga tagtatctgc
      721 aaagactgcc atgtgcagtc ttttttgttg ccggtctttt tgtgtctgat gccgtctgaa
      781 gcagtctctg cacgaccttt gtgcgaatat ttgctacact tggcaatccg tccatttctt
      841 ctcacgctta tgctgaccta cactccgccc gatgcccgcc cgcccgccaa aacccacgaa
      901 aagccgtggc tgctgctgtt gatggcgttt gcctggttgt ggcccggcgt gttttcccac
      961 gatttgtgga atcctgccga acctgccgtc tataccgccg tcgaagcact ggcaggcagc
     1021 cccacccctt tggttgccca tctgttcggt caaaccgatt tcggcatacc gcccgtgtat
     1081 ctttgggttg ccgccgcgtt caaacatttg ctgtcgccgt gggcagccga cccgtatgat
     1141 gccgcacgct ttgccggcgt gtttttcgcc gttgtcggac tgacttcctg cggctttgcc
     1201 ggtttcaact ttttgggcag acaccacggg cgcagcgtcg tcctgattct catcggctgt
     1261 atcgggctga ttccagttgc ccatttcctc aaccccactg ccgccgcctt tgccgccgcc
     1321 ggactggtgc tgcacggtta ttctttggct cgccggcgcg tgattgccgc ctcttttctg
     1381 ctcggtacgg gctggacgct gatgtcgttg gcagcagctt atccggcagc atttgccctg
     1441 atgctgccct tgcccgtact gatgtttttc cgtccgtggc aaagcaggcg tttgatgttg
     1501 acggcagtcg cctcacttgc ctttgccctg ccgcttatga ccgtttaccc gctgctcttg
     1561 gcaaaaacgc agcccgcgct gttcgcgcaa tggctcgacg atcacgtttt cggtacgttc
     1621 ggcggcgtgc ggcacgttca gacggcattc agtttgtttt actatctgaa aaacctgctt
     1681 tggtttgcat tgcctgcgct gccgctggcg gtttggacgg tttgccgcac gcgcctgttt
     1741 tcgaccgact gggggatttt gggcattgtg tggatgcttg ccgttttggt gctgcttgcc
     1801 gtcaatccgc agcgttttca ggataacctc gtctggctgc ttccgccgct tgccctgttc
     1861 ggcgcggcgc aactggacag cctgaggcgc ggcgcggcgg cgtttgtcaa ctggttcggc
     1921 attatggcgt tcggactgtt tgccgtgttc ctgtggacgg gctttttcgc catgaattac
     1981 ggctggcccg ccaagcttgc cgaacgcgcc gcctacttca gcccgtatta cgttcccgac
     2041 atcgatccca ttccgatggc ggttgccgta ctgttcacac ccttgtggct gtgggcgatt
     2101 acccgcaaaa acatacgcgg caggcaggcg gttaccaact gggcggcagg cgttaccctg
     2161 acctgggctt tgctgatgac gctgttcctg ccgtggctgg acgcggcgaa aagccacgcg
     2221 ccggtcgtcc ggagtatgga ggcatcgctt tccccggaat taaaacggga gctttcagac
     2281 ggcatcgagt gtatcgacat aggcggcggc gacctgcaca cgcggattgt ttggacgcag
     2341 tacggcacat tgccgcaccg cgtcggcgat gtacaatgcc gctaccgtat cgtccgcttg
     2401 ccccaaaatg cggatgcgtc gcaaggctgg cagacggttt ggcagggtgc gcgcccgcgc
     2461 aacaaagaca gtaagttcgc actgatacgg aaaatcgggg aaaatatata aaaaacaaca
     2521 gattgagccg aatttctgga ttaagtgccg gaaatcgcgt ataattgcgc gattaaacc
//
LOCUS       DAWEYF010000197         2572 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.197, whole genome shotgun sequence.
ACCESSION   DAWEYF010000197 DAWEYF010000000
VERSION     DAWEYF010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.197"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..1134)
                     /locus_tag="WGN93_001895"
     CDS             complement(<1..1134)
                     /locus_tag="WGN93_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEZ0227752.1"
                     /translation="MRHSHYFQWLSLPLLSVAVTQQLYAQPNESLPTVELEPVVITID
                     KSGMALANRITQMPHTTKVIYEEQIQEQATGSRQLADVMAQLIPSLGVSSGTTSNFGQ
                     TMHGRQVQFLLNGVPLTGSRDISRQLNSINPNQVARIEVLSGATSIYGSGATGGLINI
                     VTKSDLEEEQFETRIGVHGSKLSSEGIGYQVGQSVAGVSENGNVLARLDVDYRTTGGA
                     FDANGKRIAPEPAQTDKQDSKSLSVNTNVDWQLDDKQNINLALTHYNDKQDTDYAPDY
                     GNRLAVLFEEKPSLNAIKGLSLSEQPKTTKSTFNINYHHDDLWGNTINTNAYYRREKG
                     RFYPFVAPFSTAKALPILQSMNLPPATLDAYRAYGVLQSESKAE"
     gene            complement(1181..2437)
                     /locus_tag="WGN93_001896"
     CDS             complement(1181..2437)
                     /locus_tag="WGN93_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0227753.1"
                     /translation="MIISQQKNRHLLTMVALLYVAHALPLYFFNVALPAILRHQGVDI
                     RVIGMLSLLYLPWAFKFLWASYVDNYYCAKIGKRKTWLFFTQIIVVVGLFGLGFLQFS
                     ESEIVLFLSISFLVSLASATQDIAIDGYTVEQFDKSSFGLASAMQSFGVAFGSMVGGA
                     GTLWLYQRFDWQMATISLATTVVLISCSLWFLKDQDNPKHATNLSRASLIRLIKRPQT
                     KWLLALIVVFRFVEAPMMAMLNPMLVDFGFSLSQIGLLFSVFGAIVGIGSALLAGVLI
                     KYIDIVRCLILFGWLRTAVYALLCLGLLYPLLGDFLPAVGLLKTGFMSLMAISVLLIL
                     SVRYLTMTALYALFMNAANPDQAGTDFTLFVCVELLVYFIGGAMSGFLVHQFGYDKLF
                     LWLAIGSGVSMLILPTLIKKFSVTDC"
BASE COUNT          819 a          588 c          482 g          683 t
ORIGIN      
        1 ctctgcctta gattcagatt gtaacacccc ataggcgcga taagcatcca aagtggctgg
       61 tggcaaattc atgctttgta aaataggcag ggctttggcg gtcgaaaacg gggcaacaaa
      121 gggataaaat ctgcctttct ctctgcgata ataagcattg gtattgatgg tgttacccca
      181 caaatcatca tgatgatagt tgatattaaa ggtgcttttg gtggtttttg gctgttctga
      241 taatgataag cctttgatgg catttaatga aggcttttct tcaaacaaca ccgcaaggcg
      301 attaccataa tcaggtgcat aatcggtgtc ttgtttgtcg ttataatgcg tcaatgccag
      361 attgatattt tgcttgtcgt caagttgcca atcaacattt gtattgacac ttaggctttt
      421 gctgtcttgc ttatcagttt gggcaggctc aggagcgatg cgtttaccgt tagcatcaaa
      481 tgcccctcct gtggtgcgat agtcgacatc aagtcgtgca aggacattac cattttcgct
      541 gacacctgct acactctgac ctacctgata accgatacct tcactggata atttactacc
      601 atgtacaccg atgcgggttt caaattgctc ctcttccaaa tcagacttag taacgatatt
      661 aatcaaaccg cctgttgctc cagacccata aatactggtt gctcctgata aaacttcaat
      721 tctagcaact tgattgggat tgatactatt aagctgtcta gagatgtctc gcgaacctgt
      781 caaaggcacg ccatttaaca aaaattgcac ttgacgaccg tgcatggttt gcccaaagtt
      841 actggtagtg ccactactta cccccaaact tggaatgagc tgtgccatca catcggcaag
      901 ctgtcgagag cctgttgctt gctcttgaat ttgctcttca taaataactt tggtggtatg
      961 gggcatttgc gtgatacgat tggcaagtgc cataccgctc ttatcaatgg taataaccac
     1021 aggctctaat tcaaccgttg gtaatgattc attgggttga gcgtacaact gctgagttac
     1081 tgccacactt agtaaaggca aagataacca ttgaaaatag tgggaatgac gcataaatta
     1141 ctccttatgg aaaagtaaaa ttttaacagt ctgttacggt ttaacagtct gttacggaaa
     1201 atttttttat caatgtcggc aaaataagca ttgacacccc agaaccaatc gcaagccaca
     1261 aaaatagctt gtcatagcca aactgatgta ctaaaaatcc actcatcgcc ccgccgataa
     1321 aatacacaag caactccacg cacacaaaca aagtaaagtc cgtgccagct tggtcgggat
     1381 tggcagcatt cataaacaga gcatataagg cagtcattgt taaatagcga acagataaaa
     1441 ttagcaaaac actaattgcc atcaagctca taaaccctgt ttttaataaa cctaccgcag
     1501 gtaaaaaatc acccaataaa ggatatagca atcctagaca caacaaagca taaactgccg
     1561 ttcttagcca tccgaataat ataagacaac gtacaatgtc gatatatttg attaataccc
     1621 ctgccaaaag tgctgaacca atcccaacaa tcgctccaaa taccgaaaac aaaagcccaa
     1681 tctgagacag tgaaaaacca aaatccacaa gcattggatt tagcattgcc atcatcggag
     1741 cttccacaaa gcgaaacacc acaatcaaag ctagtaacca tttagtttgc gggcgtttga
     1801 taagcctaat aagacttgct ctggaaagat tggtagcatg tttgggattg tcttgatctt
     1861 ttaagaacca tagtgaacac gaaataagca caacagttgt tgccaaactg attgtcgcca
     1921 tttgccaatc aaatctctga tatagccaca gtgtgccagc accgcctacc atactaccaa
     1981 acgccactcc aaaactttgc atggcacttg ccagcccaaa ggatgactta tcaaattgtt
     2041 ccactgtata gccatcaata gcgatatctt gggtggcact tgccaaagac accaaaaaac
     2101 ttatgctcag aaataataca atctcagact cagaaaactg taaaaagcca agcccaaaca
     2161 gcccgactac cacgataatt tgagtaaaaa ataaccaagt tttgcgtttg ccgattttgg
     2221 cacaataata attgtccaca taacttgccc acagaaattt aaacgcccac ggcaaatata
     2281 aaagtgaaag catgccaatc accctaatat caacgccttg atgtcttaaa atggcaggca
     2341 atgccacatt aaaaaaatac aaaggcaagg catgggcaac atataacagt gccaccatcg
     2401 tcaaaagatg gcgatttttt tgttgtgaga taatcatcag accgccccta ttttagtgtt
     2461 tatccatgct ttggcttcag tcagtgacaa caccaccgca taaggcactc gccatgcttt
     2521 atgaaaagca ggactgtcta aggcttgtct ttgagtctca tcatcaacaa tt
//
LOCUS       DAWEYF010000198         2523 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.198, whole genome shotgun sequence.
ACCESSION   DAWEYF010000198 DAWEYF010000000
VERSION     DAWEYF010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.198"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(31..837)
                     /locus_tag="WGN93_001897"
     CDS             complement(31..837)
                     /locus_tag="WGN93_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ0227754.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1057..2427
                     /gene="ffh"
                     /locus_tag="WGN93_001898"
     CDS             1057..2427
                     /gene="ffh"
                     /locus_tag="WGN93_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ0227755.1"
                     /translation="MLDNLTSRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNQALVELMGKENKTLDLSVSPPAV
                     VLMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEITTAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          701 a          625 c          652 g          545 t
ORIGIN      
        1 ggggcttcag acggcatctg ttggctcttc ttatcttttc agaatgattt ccaatacgaa
       61 cttgctgccc atataggcaa tcataaggct gacaaatccg atgatggtcc acacggcggc
      121 ttttttgccg cgccatgcgg tcatgctgtg cttgagcagc agtccgccgt aaatcagcca
      181 tgacaatatg ccgaatacgg ttttatgggt aaaggtcatg ggtttgccga atacggcttc
      241 ggcgaagaat gtgccgctga cgacggaata ggtcagcagg atgaaacctg cccacatggc
      301 ctggaacatg agtttttcca aactgagcaa cgacggcagg aatcctgcga gcttggagaa
      361 gctcctgcgg tgcaggctcc gattcagcag cagggtcaaa acggacaata atgttgcgat
      421 gccgaacagc ccgtatgcga gcagcgaagt tccgatatgc agcataaagg gaaggtcggt
      481 aatttcatat cccgagaatt ttccaggaaa aaccaaacct gacagcagca tcagtgcggc
      541 gcaaggatac agcagcaact gcactccgcg cagcggataa aaaaagctgc cggcaaaata
      601 aataaacagc atcatccaaa caatcaggct gccggaatac ccgaagccca taatgatgat
      661 tttgtcttga atgaccggca taagcagtgc cgcgccgtgg acggtcaatg ccgcgcccaa
      721 aaccggcaat tccgtcttcc acgggtaatc ccggccgcgc ccctgctgtt ggcagtgcca
      781 tgcaaatgca cccaatcctg cgtaaaccgc cgtcaaaaag atgaaaactg tcggcatggt
      841 ggactttctc tatctatact gttgcgccgt atgcggtcgc ttatgaaata ttggaacttt
      901 taacgttgga attgtaaaat ccccgtttcg ggcaagcctt gacggatttg ccgatatgct
      961 gtccggcaca caagccgcat caaattattt tgattttatt ttaacaaaga atgcccctga
     1021 tggggcaagc tattcttatt cagaccaagg accagtatgt tagacaattt aaccagccgc
     1081 ttcagcaatg tcttcaaaaa catccggggg caggccaaac tgaccgaaga caatattaaa
     1141 gaagccttgc gcgaagtccg cctcgccctg cttgaggcgg atgttgccct gcctgtcgtc
     1201 aaagagttcg tcaacaacgt caaagaaaag gccctcggtc aggaagtggc gggcagcctg
     1261 acgcctgacc aagcctttat cggcgtggtc aaccaagcct tagtcgaact gatgggcaag
     1321 gaaaacaaaa cgctggattt gtcggtttca ccgcccgccg tcgtgttgat ggcgggtttg
     1381 cagggtgccg gtaagacaac aaccgtcggc aaactcgccc gcctgttgaa aaacgatcag
     1441 aagaaaaagg ttttggtggt atccgccgac gtttaccgtc ctgccgcgat tgaacaactg
     1501 cgtctgttgg ccgaacaggt cggcgtggac ttttttccat ccgataccaa ccaaaaaccg
     1561 gttgagatta caactgccgc cgtcgattac gccaaaaaac atttttacga tgtcttgatg
     1621 gtcgataccg ccggtcgttt ggcaatcgat gaagagatga tgaacgaaat caaagcgctt
     1681 catgcggcgg tcaatccggt tgaaaccttg ttcgttattg atgccatgtt gggtcaggat
     1741 gcggtgaaca ctgctcaggc atttaatgaa gctctgccgc tgaccggtgt cgtattgacc
     1801 aagatggacg gcgactcgcg cggcggtgcg gcattgtccg tacgccatgt aaccggcaaa
     1861 ccgattaaat ttatcggcgt cggcgaaaaa atcaacggcc tcgaaccttt ccaccccgac
     1921 cgtcttgcca gccgcatcct cggcatgggc gacgtattga ccctgattga agacgttcaa
     1981 aaaggtattg atgaagaagc cgccgccaaa atggcgaaaa agctacaaaa aggcaaaggc
     2041 ttcgacctca atgactttaa agaacaaatc cagcagatgc gcaatatggg cggcttggaa
     2101 aacctgatgt cgaaaatgcc gggcgaactg ggtcaaatat cgaaacaaat ccccgaagga
     2161 acggctgaaa aagcgatggg caaagtggaa gccatcatca actcgatgac tccaaaagaa
     2221 cgcgccaacc ctgccctgct caaagccagc cgcaaacgcc gtattgcaat gggtgcgggc
     2281 acgaccgtac aggaagtgaa caaattgctc aaacagtttg aacaaatgca acaaatgatg
     2341 aagatgttca gcggcaacgg cttgggcaaa ctgatgcgta tggcgaaagg aatgaaggga
     2401 atgaaaggaa tgttcccggg tttgtaagcc gatttgaccg aaaacgccgt ctaaaatttc
     2461 agacggcgtt tttgttttat attctgattt atagtggatt aacaaaaatc aggacaaggc
     2521 ggc
//
LOCUS       DAWEYF010000199         2454 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.199, whole genome shotgun sequence.
ACCESSION   DAWEYF010000199 DAWEYF010000000
VERSION     DAWEYF010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.199"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            148..597
                     /locus_tag="WGN93_001899"
     CDS             148..597
                     /locus_tag="WGN93_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ0227756.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
     gene            complement(687..842)
                     /locus_tag="WGN93_001900"
     CDS             complement(687..842)
                     /locus_tag="WGN93_001900"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ0227757.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(1139..1351)
                     /locus_tag="WGN93_001901"
     CDS             complement(1139..1351)
                     /locus_tag="WGN93_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227758.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            1583..2056
                     /locus_tag="WGN93_001902"
                     /pseudo
     CDS             1583..2056
                     /locus_tag="WGN93_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2171..2324
                     /locus_tag="WGN93_001903"
                     /pseudo
     CDS             2171..2324
                     /locus_tag="WGN93_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271703.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
BASE COUNT          686 a          478 c          595 g          695 t
ORIGIN      
        1 gtcggcgcgc ccgcaccaaa aggcccagcc aaaccggcta taccggccgc taaaaaatag
       61 agtgggaaat atgcatactg ttgaatggga tagtaagtct gttcaaagaa atatgttgaa
      121 taatctgttc ttattggaag taaagtaatg actgataatc gggggtttac gctggttgaa
      181 ttaatatcag tggtcttgat attgtctgta cttgctttaa ttgtttatcc gagctatcgc
      241 aattatgttg agaaagcaaa gataaatgca gtgcgggcag ccttgttaga aaatgcacat
      301 tttatggaaa agttttatct gcagaatggg agatttaaac aaacatctac caaatggcca
      361 agtttgccga ttaaagaggc agaaggcttt tgtatccgtt tgaatggaat cgcgcgcggg
      421 gccttagaca gtaaattcat gttgaaggcg gtagccatag ataaagataa aaatcctttt
      481 attattaaga tgaatgaaaa tctagtaacc tttatttgca agaagtccgc cagttcgtgt
      541 agtgacgggc tggattattt taaaggaaat gataaggact gcaagttact taagtaggct
      601 tgtttacaaa tcgatcgata gtgtttcagt atttgtgcgg ttttccgcct tgatggaatg
      661 aaaatcgtgt aatattaagc ctatagttat gactcgtaat ctgtatctgg attgtttctg
      721 gataaaagaa taaacccaat cgttgggtcg tttgggttta tttcattgat tgacagaagt
      781 tttttaataa atggaaagac aacgcctttt ttaggggatg gttttgtttt tctctctgat
      841 attgcctata ggtttctgcc ccttccattc taaatatatt atccgattcg gataagtcga
      901 atagggcact tgatgctaag ccgattacaa gtcgtttcga taaatcatag gacataataa
      961 ggatatcttt agccgtggat ttatggggta tagtagcaaa aattgtatag gggtgtacat
     1021 tactcatctg aaaaggtgaa cagattttat aatgctttca gacggcattt tgtttccaat
     1081 tcgttatagg cttgtatttt gcctatgtaa tatagtaatt taaggtatgt ttgcaccttt
     1141 agacataagg gcaatcgcag ctttcgtctt taatatacaa atcactatcc agcttcagcc
     1201 atacccaata gttttccaaa ccgcatacct ccgcccgata acgcccggtg gaagtttttt
     1261 ggacagcacc aactttgccc tgctgaaaat agagcagtcc gcgttcggcg atatggggcg
     1321 ggaacaggtg gagcgggtgg atatggggca tggtttgctt ccaagaagtt gttgaaatat
     1381 gagaagttta ctggttcggg cgatgtttgg ggagaggatg gtgggaagat ttgttttaca
     1441 aagtggcaaa aggtcgtctg aaaatagggt tcagacgacc ttttggttta gttgggaagg
     1501 gctgtggttt aaaaagactg agacctttgc aaaactcccc aaaatcccct aaattcccac
     1561 caagacattt aggagatttc tcatgagcac cttctttcag caaaccgccc aagccatgat
     1621 tgccaaacac atcgaccgtt tcccactatt gaagttggac caggtgattg attggcaacc
     1681 gatcgaacaa tacctgaacc gtcaaaaaac ccgttacctc cgagaccacc gcggtcgtcc
     1741 cgcctacccg ctgttgtcca tgttcaaagc cgttctgctc ggacaatggc acagcctctc
     1801 cgatcccgaa ctcgagcaca gcctcatcac ccgcatcgac ttcaacctgt tttgccgctt
     1861 tgacgaactg agcatccccg attacagcac cttatgccgt taccgcaact ggctggcgca
     1921 agacgacacc ctgtccgaat tgctcaaact gattaaccgc caactgaccg aaaaaaacct
     1981 aaaagtagag aaagcatccg ctgccgtcgt tgacgccacc attattcagg ccgccggcag
     2041 caaacagcgc caggcccgat aacgcccggc ggaagttttt cggacatcgc gaaccttgcc
     2101 ctgctgaaaa tacaaaaggc cgcgttcggc gatatggggt gggaacaggt gaggagggtg
     2161 gatacggggc atggttggct tccaagaagt tgttgaaata tggggagttt actggttcgg
     2221 gcgacgtttg gggagagggg tgggaattct tgttttgcga agtggaaaaa ggtcgtctga
     2281 aaatgggttt cagacgacct tttttagggt ggaaagggga gtagtttaga aagtccacac
     2341 atattctgcg tatggattcc aagttgtata gggtggtatc ttccaaaaat acatatgagt
     2401 aggatagtgt tatgagttga caacttgttt attgaaaata tctttcttga actg
//
LOCUS       DAWEYF010000200         2451 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.200, whole genome shotgun sequence.
ACCESSION   DAWEYF010000200 DAWEYF010000000
VERSION     DAWEYF010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.200"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            25..555
                     /locus_tag="WGN93_001904"
     CDS             25..555
                     /locus_tag="WGN93_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ0227759.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEDVL
                     KKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFT
                     RSPKRQTEFAVGQVKW"
     gene            697..2358
                     /locus_tag="WGN93_001905"
     CDS             697..2358
                     /locus_tag="WGN93_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ0227760.1"
                     /translation="MTESITRDNMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     VTPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHKDGSVKGIATGNM
                     GVGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVMHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGILVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVEGFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIAYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMINVNYKEYASPETRYCPAGVYEIIE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
BASE COUNT          621 a          601 c          678 g          551 t
ORIGIN      
        1 cctgttgctt atggaaaaat caaagtgcag agttggaaag agaggcgcga tttcaatatt
       61 gtaaagcagg atttggattt ttcctgcggg gcggcttcgg tggcgacgct tttgaacaat
      121 ttttacgggc aaaagctgac ggaagaggac gtgttaaaaa aactggataa ggagcagatg
      181 cccgcgtcgt ttgaggatat gcggcgcatt atgcctgatt tgggttttga agcgaaaggc
      241 tatgccctgt ctttcgagca gcttgcacag ttgcaaatcc ccgtcatcgt gtatctgaaa
      301 taccgcaagg atgatcattt ctcggtattg cgcggtatag acggcaatac ggttttgctt
      361 gccgacccgt cgctgggtca tgtttcgatg agcagggcgc agtttttgga tgcttggcaa
      421 acccgtgagg gaaatttggc aggtaagatt ttggcggttg tgccgaaagg gagggatgcc
      481 ggcggggata aggcgttttt cacacgcagt ccgaaacgtc agacggagtt tgcggtcgga
      541 caggtaaaat ggtagcgtgc ttattgaaat ttcgacaaag gtcgcctgaa aaccgaaaat
      601 atggttttca gacgaccttt gttgtatttg gtaactatat gttcccgttg tataattacg
      661 gatttgcaat tcaataataa atacacagga accgccatga cagaatccat cacccgcgac
      721 aatatgcaat acgatgtcgt gattgtcggc gcaggcccgt cgggtttgtc cgccgccatc
      781 aaactcaagc agcttgccga acaaaatggg cgcgaaatca gcgtttgcgt ggtggagaaa
      841 ggttcggagg cgggtgcaca ttcgctggcg ggcgcggtta tcgatccgat tgcgctgaat
      901 gagttgattc ccgactggaa agaaaaaggc gcgccgctga cacgcacagt aacgcaggac
      961 aaggtgttgt tcctgaccga gaaaaaagcg ttcaacctgc ccgttacccc caatttcgac
     1021 aatcatggca actacatcgt cagcttgggc gaagtcgtac gctggttggc ggagcaggcg
     1081 gaaaatttgg gcgtggaaat ttatccgggc tttgccgctg ccgaagtgct gtatcacaaa
     1141 gacggttcgg tcaaaggcat tgcaaccggc aatatgggcg tgggcaaaga cggcgaaccg
     1201 accgattcat tccagcccgg catggagctt tgggcacagc aaaccctgtt tgccgaaggt
     1261 tgccgaggtt cgctttccaa gcaaatcatc gaacgcttca aactcgacca aaacagccag
     1321 ccgcaaactt acggcttggg cattaaagaa gtttgggaag tgccgtccga acagcatcag
     1381 cccggtttgg tgatgcacag cgcaggctgg ccgctggaca gcaaaaccta cggcggcgcg
     1441 tttgtttacc atttcgacga caacaaagtt gccgtcggct tcgtggtcgg tttggactat
     1501 caaaatcctt atctgtcgcc gtttgaagag ttccaacgtt tcaaaaccca tcccgaaatc
     1561 cgcaaaacct ttgaaggcgg ccgccgcatt gcttacggcg cgcgttcgct gattgaaggc
     1621 ggtttgcaaa gtttgccgaa gctctcgttc aaaggcggca ttttggtcgg cgatgcggcg
     1681 ggtttcctca atatgccgcg catcaaaggc attcataccg cgatgaaatc cgccatgctc
     1741 gccgccgaag ccgtgttccc tttgttggaa aaccttgaag aagtggaggg tttcgacagc
     1801 ggcaaagagg cggcggatta tcagcaacgt tttgaacaaa gctggctgta tcaagagctt
     1861 tacgccgcgc gcaacgtccg tccgtcattc aaatggggcg tttacctcgg ctcgctttat
     1921 accggcatcg accagatgat tttcagaggc aaagccccgt ggaccttgaa acatcacggt
     1981 aaagacaacg agcagctcaa aaaagccgcc gcgtgcaagc cgattgctta tccgaaaccc
     2041 gatggcgtgt tgaccttcga ccgcttgagc agcgtcttcc ttgccaatct cgcgcacgaa
     2101 gaaaaccagc ccgaccattt ggtgctgaac aatccgcaaa cgatgataaa cgtgaactac
     2161 aaagaatacg cctcgcccga aacgcgctat tgtccggcgg gtgtgtacga aattattgaa
     2221 gaaaacggca atccgcgcct gcaaatcaac gcggcaaact gcgtgcactg caaaacctgc
     2281 gacatcaaag acccgacgca aaacatcact tggatttgcc ccgaaggcgc gagcgggccg
     2341 aattacggcg ggatgtaaac cttattccgc cgttacgccc ggtcaggaat aaggaatggg
     2401 gcagttgttc aaacctgccc cgtttgaacc cataatatag tggattaaac t
//
LOCUS       DAWEYF010000201         2374 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.201, whole genome shotgun sequence.
ACCESSION   DAWEYF010000201 DAWEYF010000000
VERSION     DAWEYF010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.201"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..1071
                     /locus_tag="WGN93_001906"
     CDS             <1..1071
                     /locus_tag="WGN93_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ0227761.1"
                     /translation="TFFDKYGVRVSLLEDEDFIRAASMLAEEVFGFGIYKESKGSGGR
                     FYERCWLMGSEDVLYGRVHFGGQNNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPK
                     ITRVDIAKDFFNGEYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKT
                     YGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAY
                     PICERFVQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKFIFPELDKAKLFELI
                     EPSHHKLPKSLAPEAYDCAFLKAQAIHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHV
                     NNEESYNNFIYDKFARLPISWA"
     gene            1116..1406
                     /locus_tag="WGN93_001907"
     CDS             1116..1406
                     /locus_tag="WGN93_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227762.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGRSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            1411..1608
                     /locus_tag="WGN93_001908"
     CDS             1411..1608
                     /locus_tag="WGN93_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227763.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            1616..1900
                     /locus_tag="WGN93_001909"
     CDS             1616..1900
                     /locus_tag="WGN93_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227764.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANATLPDTAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            1907..2185
                     /locus_tag="WGN93_001910"
     CDS             1907..2185
                     /locus_tag="WGN93_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227765.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSLKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
BASE COUNT          709 a          542 c          542 g          581 t
ORIGIN      
        1 acctttttcg ataaatacgg cgttcgtgta agtcttttgg aagacgaaga tttcattcgt
       61 gccgcgtcca tgctcgccga agaagttttc ggtttcggta tctacaaaga atccaaaggt
      121 tcgggcggtc gtttctatga gcgttgttgg ttgatgggtt cggaagacgt cctatacggt
      181 cgcgtccatt ttggcggaca aaacaatacc atccttttcg aactgaccgg caccggttgc
      241 ggcgtcgcaa aagaaggctg ggaatcacga cttttcgcat tcctgactaa tgcaatccgc
      301 ccaaaaatca cacgcgttga catcgcaaaa gactttttca acggcgaata cagcccgaac
      361 caagcccgtg aagaccgaaa taaaggtatg tttacctgtc atcacgtcaa accaaaaggc
      421 gaatgtttgg ggtcagattg ggaagaagac gatgaagcca aaatgaccaa aggcaagacc
      481 tatggtatcg gctcccgtga atcgtccaaa tatgtccgcg tctatgaaaa aggcaagcag
      541 ttgggcgata aaacaagcac atggacgcgc tttgaaattg aattcaaagc aaaagacatc
      601 gttatccctt ttgaagtttt gcagaatccg ggcgaatatt tcggcggcgc atatccgatt
      661 tgcgaacgat tcgtccaaaa ggcaacgcgc atacacgcgg ttaaggaaga taaggtcatt
      721 tcagccgacc gctaccttga atgggtaaaa aaacagtttg gacgtgcggc aaacggtctg
      781 aaattcattt ttcccgaatt ggacaaagcc aaactgtttg aactgattga gccgagtcat
      841 cacaagctgc ccaagtcttt ggctcccgaa gcctacgact gcgccttttt gaaagctcaa
      901 gccattcatg aacagcccgc attcaaaccg tacaaagacc cttactatat gtacgaatat
      961 tacgagaatc ttgaaaaaca gcttgaacag caaaaacacg tcaacaatga agaaagctat
     1021 aacaacttca tttacgacaa attcgcaaga ctaccgattt catgggctta aagtgtctgt
     1081 ccgaaagacg tttaatcaca caaggaaacc aaaaaatgaa catccaactt caaggccaca
     1141 tcgtcggcgt taaaaaattc aacggacaaa tcgaaggcag gagcttcgac tattgccgcc
     1201 tgattgtcgc cacaccctta gacagctccc aaggcaacgc attgggcagc tctactactg
     1261 aatacgattt cggcggctct gccaatttcg agcagttccg aaacgcccaa tttccgatcg
     1321 aagcaaacct gaacgtagaa atcgtcacta cgggcaaaac ccaaaaactg aaagtcatcg
     1381 gttttcaact cgtgaagaaa ggctgattga atgcagaaag tctatgttgt ccagtccgta
     1441 tcaacagggg actttctgta tctctctcct gaaacgggcg acatcggaca taccaaatta
     1501 atcaccaatg ccgattattt ctacgacttc gaagaagcga ttaacgcagg tttggaagaa
     1561 atcggcaacc aatacgaatt tgtcgtattc ggatttttga aagactgatt ttcggatgtt
     1621 cggcggtcgt ttgaaaaacg ctccatccat taccgccaaa cactttttga aggaaaatat
     1681 catgaaattt attaacacct gccgtaaata cggcgcaaaa ctggctgttg taacagctgc
     1741 tcccctggct ttggccgcac atgcaaatgc aacgttgccc gatacggcaa aaaacgcttt
     1801 ggaagccgca aaagcggacg gtatggaagc cggttggatt gtcgttggcg ttttcgccgc
     1861 gctttttgta ttttccatcg ttaagagagt gatgaagtaa gacggcatgt actaccaagt
     1921 cggaaataaa tgtcttgaga agcaccaggc tgaaaacctt tatttcagct tggtagtacc
     1981 aagaatcaaa gaaaacggac agattgtcag gccggaatat aacggcagcc tgtggaagat
     2041 gtcggacggt cagccgctaa ggcttttatt ggcggaatgc agtctgaaag acaacctgca
     2101 aagcggcctt gaaacaggct ggatagtatt cggcatcctc gcgtccgttt actttgtttc
     2161 cctgctgaaa aaggttttga aatgatggat ttttattttt atctcggcgt ttccgtaccc
     2221 gtattaatcg gggcggttct gtttaagaat tgagcgcatg aagttatggt gtcaaaatca
     2281 ggctttcaaa acaatcattg aaaggcagaa ccatgaacaa gccgtttatc actcaggcgc
     2341 agttggcact ttataaatat cagccgtcta gcaa
//
LOCUS       DAWEYF010000202         2353 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.202, whole genome shotgun sequence.
ACCESSION   DAWEYF010000202 DAWEYF010000000
VERSION     DAWEYF010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.202"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(35..991)
                     /locus_tag="WGN93_001911"
     CDS             complement(35..991)
                     /locus_tag="WGN93_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ0227766.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            1227..2192
                     /locus_tag="WGN93_001912"
     CDS             1227..2192
                     /locus_tag="WGN93_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0227767.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAGKE"
BASE COUNT          496 a          639 c          749 g          469 t
ORIGIN      
        1 gtttcaaatc aaaatatcta tgccgccggc cccatcagca cttcttcaca tccgaaggca
       61 aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc cgcgtggcgg tagccgcaaa
      121 agtgcatggc ggcttggacg gtgctgccgg attcgatgag ggcgagcgcg tgttccagcc
      181 gcaggcggcg caggcatccg gcgacggttt cgccggtttg cgctttgaaa tagcgtttca
      241 ggtagcattc gttcagtccg acgcggcggg cgatttcggc gatggtcagc ggacgggcga
      301 attcgtgttg caggatgtcg gcggcttcgt ctatgcgccg acggcggtaa ccgttgtcgt
      361 ggcggcggaa ggtgaagcgc aataatcggg cggagagttc cagcgcggcg gcttcgtcgg
      421 caagcaggcc gaagccgtcc gattcgaacg ggcgttgcag cagtgggcag gccgccgccg
      481 tcagtgccgc cgcgttttgc gccagccgtt gcagggcgaa tcggcctatc gtttgcggcg
      541 aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg gcgcagtttt tccagcgaaa
      601 aatccaaatg cagcgcgcac atgccgctgt tgtcgggcag cagggtttcg gatacgtccg
      661 ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg gcggtattcc ctgccgccca
      721 tttgtaaccg gttctgcccc gacaccatga cgaacaaggc gcagttgtgg ctgaaattgt
      781 ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat ccgcgacaag gtgatgcccg
      841 agtcgaagcg gttgatgcac atttccagat gcaaaccggg ctgttttgcc tgcgcaatga
      901 gcgcgctgtc ggaacagccg tccaacgccc agccggattt atcggagcgg acataggttt
      961 ggtactggcg gtagatggcg gcggtgttca tgattggata ggaacgagtt gtctaacaaa
     1021 tgaattaaat aggaattatt accaataatc aagcgcaggg attggttgaa acggaaaagg
     1081 tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg gaatttgttt tgccgtatcg
     1141 ggaattttgc gttttgcggc gtggtttctg caggttgttt gcttaataat aaacattctt
     1201 attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt ttattgggca gcctgcgccg
     1261 tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa aactgtatcc gccgcatccg
     1321 catctgccgc cacactgacc gtgccgaccg cgcggggcga tgccgttgtg ccgaagaatc
     1381 ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac gctgaccgaa ttgggcgtga
     1441 atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt gcagcctgca tttgacaagg
     1501 cggcaacggt ggggacgctg ttcgagcccg attacgaagc cctgcaccgc tacaatcctc
     1561 agcttgtcat taccggcggg ccgggcgcgg aagcgtatga acagttggcg aaaaacgcga
     1621 ccaccataga tctgacggtg gacaacggca atatccgcac cagcggcgaa aagcagatgg
     1681 agaccttggc gcggattttc ggcaaggaag cgcgcgcggc ggaattgaag gcgcagattg
     1741 acgcgctgtt cgcccaaacg cgcgaagccg ccaaaggcaa aggacgcggg ctggtgctgt
     1801 cggttacggg caacaaggtg tccgccttcg gcacgcagtc gcggttggca agttggatac
     1861 acggcgacat cggcctaccg cctgtagacg aatctttacg caacgagggg cacgggcagc
     1921 ctgtttcctt cgaatacatc aaagagaaaa accccgattg gattttcatc atcgaccgta
     1981 ccgccgccat cgggcaggaa gggccggcgg ctgtcgaagt attggataac gcgctggtac
     2041 gcggcacgaa cgcttggaag cgcaagcaaa tcatcgtcat gcctgccgcg aactacattg
     2101 tcgcgggcgg cgcgcggcag ttgattcagg cggcggagca gttgaaggcg gcgtttgaaa
     2161 aggcagaacc cgttgcggcg gggaaagagt agggagtcgt ctgaaaacgg agcttccgaa
     2221 ggaagcgggg ggtttctgcg aagctaaagt gcggtttcaa cgaattgaaa agcagcctgt
     2281 atgttgaaaa taccgctcaa gcaaacctgc ggtttgccgc cctctcccta gccctctccc
     2341 acagggagag ggg
//
LOCUS       DAWEYF010000203         2351 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.203, whole genome shotgun sequence.
ACCESSION   DAWEYF010000203 DAWEYF010000000
VERSION     DAWEYF010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.203"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            271..2151
                     /locus_tag="WGN93_001913"
     CDS             271..2151
                     /locus_tag="WGN93_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEZ0227768.1"
                     /translation="MNIFYEESGQFKVAAVVQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPVYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKHGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGIKRVGIHIAAPS
                     LAIKQGGKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSK
                     FNVGEPTCKIEAVNIAENLRIQTIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPDRAPQYDYSIELDEEGKVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGISELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          635 a          705 c          556 g          455 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagccgcgcc aaccctcccc
       61 aaaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgtt tcaacacaca ggacggcaca taaagcaccg ccctatgtgt
      181 tgccctgatt tggaaggggt tgcgcccctc ccaaataaat tctgattcta ccgccctaaa
      241 ggttggggtt tcaaccgaaa aggaaacacg atgaatatct tttacgaaga gtccggccaa
      301 ttcaaagtcg ccgccgtcgt ccaaaaaaac gatgccacct accaagtcga tacccaacac
      361 ggcaaacgca ccaaagtgaa ggcaaacaat gtctttgccg agtttgacgg cgatatggcg
      421 gcgtttttgg aaaacgcgca ggcgcaggcg gcggacatcg acaccgattt attgtgggaa
      481 gtatgcggcg aagaggaatt taccgccgaa gccatcgccg aagaatatta cggtcatgcg
      541 ccgaccaaaa ccgagctggc ggcaactttg attgcacttt acgccgcgcc ggtgtatttc
      601 tacaaaaaag ccaaaggcgt gttcaaagcc gcgcccgaag aaaccttaaa acaagcgctt
      661 gccgccatcg aacgcaaaaa acagcaggac gcacaaatcg acgcttgggc agaagccttg
      721 aaacacggcg agatgccgtc tgaaatcgcg gcggatttga aaaccatcct acacgcgccc
      781 gacaagcagt cgctgaccta caaagccttt accaaagccg ccgacgcgct gaaaacctcc
      841 gcctacgaac tggcgaaaaa aacgggcggc attacgtcca ttccgcaata cctgcaagac
      901 gggtttgaaa tcaaatactt tcctaaaggc acaggcttcc ccgacctccc ccttcccgaa
      961 atgcccgacc tgcccaaggc tgatgttacc gccttttcca ttgacgacga atcgaccacc
     1021 gaagtggacg acgctttgag cctgaccgac ttgggcaacg gcataaagcg cgtcggtatc
     1081 catatcgccg cgccgtcgct tgccattaaa caaggcggca aaatggaaaa aaacatcatg
     1141 gaacgcctga gtacggtcta tttccccggc ggaaaaatta ccatgctacc cgaaaactgg
     1201 attgccgcgt tcagccttga tgcaggtgca taccgccctg ccgtcagcat ttatttcgat
     1261 gtggacagca aattcaacgt cggcgagccg acctgtaaaa tcgaagcggt caacatcgcc
     1321 gaaaacctgc gcattcaaac catcgagccg catttcaacg ccgaagcggg cttggacgaa
     1381 gcgggcgaaa tgatgttcgc ccaccatcaa gacctgattt ggttttatca attcgccatc
     1441 accctgcaaa aagcgcgcgg caaatacgaa cccgaccgcg cgccgcaata cgattacagc
     1501 atcgaattgg atgaggaagg caaagtctcc gtcgtccgcc gcgaacgcgg ttcgcccatc
     1561 gatacgctgg tcagcgagat gatgattctt gccaacagca cttgggcaca aatgctccat
     1621 gacaacgacc tgcccggcct cttccgcgtc caacccaccg gaaaagtacg catgagcacc
     1681 aaatccgagc cgcacatcgg catgggcgtg cagcattacg gctggttcac ttcgccgctg
     1741 cgccgcgccg ccgactacat caaccaaaag cagctgatca gcctgataga cgacactgcc
     1801 gagccgctgt atcaaaacag cgatgccgag cttttcgccg cgctgcgcga ctttgatgcc
     1861 gcctataccg cctacgccga cttccaacgc caaatggaag cctactggag cctggtttac
     1921 ctgcaacagc aaggcatcag cgagctgacg gcgacgattc tgaaagaaga cctcgtccgc
     1981 atcgaaggcc tgccgctggt cacgcgcgcg accggtattc cgtttgacgc actgcccaaa
     2041 tcgcaggcat tgttcaaaat caccgaatta gatgccgaga agcagtttgt ctcgctcaac
     2101 tacatcaagg cagtcgcacc cgcgggtaca acggcaggca atgccgtctg aagcccgata
     2161 cggcaaactc cggcaaaaac agaaacctga atctcatcat tcccacagtc gggaatccgg
     2221 ttttttgggt ttccgttgtt tttccgtttc aatgaacttc caagccgccg ttcccgataa
     2281 atacccgcaa tctaaaatcc cgtcattccc acgcagatgg gaatctaggt ttatccgcac
     2341 agaaactgat a
//
LOCUS       DAWEYF010000204         2338 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.204, whole genome shotgun sequence.
ACCESSION   DAWEYF010000204 DAWEYF010000000
VERSION     DAWEYF010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.204"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            43..2256
                     /locus_tag="WGN93_001914"
     CDS             43..2256
                     /locus_tag="WGN93_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ0227769.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKKLVLAARSLA
                     EAHYPADAVTPYGEPLSDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNVPDNPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          598 a          755 c          566 g          419 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac gaaagaccca tcatgaccgc catcagcccg
       61 attcaagaca cgcaaagcgc gactctgcaa gaattgcgcg aatggttcga cagctactgc
      121 gccgcgctgc cggacaacga taaaaaactt gtcttagccg cccgttcgct ggcggaagca
      181 cattaccccg ccgatgccgt cacgccgtat ggcgagccgt tgtccgacca cttcctcggc
      241 gcggcacaaa tggtcgacga actcgacctg ctgcccgatg ccgtcgccgc caccctgctt
      301 gccgacatcg gacgctacgt ccccgattgg aatctattgg tttccgaacg ctgcaacagc
      361 accgtcgccg agctggtcaa aggtgtggac gaagtgcaga aactcaccca cttcgcccgg
      421 gtggacagcc tcgccacgcc agaagaacgc gcccagcagg cagaaactat gcggaaaatg
      481 ctgctggcga tggttaccga catccgcgtc gtgttaatca aactggcgat gcgtacgcgc
      541 accctgcaat tcttaagcaa cgttcccgac aatcctgaaa agcgcgccgt tgctaaagaa
      601 accctcgaca tttttgcccc actcgccaac cgcttgggcg tgtggcaact caaatggcag
      661 ctcgaagatt tgggcttccg tcatcaagag ccggaaaaat accgcgaaat cgccctgctt
      721 ttggacgaaa aacgcaccga gcgcctcgaa tacatcgaaa acttcctcaa tatcctgcgt
      781 acggaactca aaaaatacaa tatccacttt gaagtcgccg gccgcccgaa acacatctac
      841 tccatttaca aaaaaatggt gaagaaaaaa ctcagcttcg acggcctctt tgacatccgc
      901 gccgtgcgga ttctggttga taccgtcccc gagtgttaca ccacgctggg cattgtccac
      961 agcctttggc agcctatccc cggcgagttc gacgactaca tcgccaaccc gaaaggcaac
     1021 ggctataaaa gtttgcacac cgtcatcgtc ggtcccgaag acaaaggtgt ggaagtgcaa
     1081 atccgcacct tcgatatgca ccaattcaac gaattcggtg tcgccgccca ctggcgttac
     1141 aaagaaggcg gcaaaggcga ttccgcctac gagcaaaaaa tcgcctggtt gcgccaactt
     1201 ttggactggc gcgaaaatat ggcggaaagc ggcaaggaag acctcgccgc cgccttcaaa
     1261 accgagcttt tcaacgacac gatttatgtc ctgaccccgc acggcaaagt cctctccctg
     1321 cccacgggcg cgacccccat cgacttcgcc tacgccctgc acagcagcat cggcgaccgt
     1381 tgccgcggtg cgaaagtcga agggcagatt gtgccgctgt ccaccccgct cgaaaacgga
     1441 cagcgcgtcg aaatcattac cgccaaagaa gggcatcctt ccgtcaactg gctttacgaa
     1501 ggctgggtca aatccaacaa ggcaatcggc aaaatccgcg cctacatccg ccagcaaaac
     1561 gccgacaccg tgcgcgaaga aggccgcgtc caactcgaca aacagcttgc caaactcacg
     1621 cccaaaccca acctgcaaga gcttgccgaa aatctcggct acaaaaagcc agaagacctc
     1681 tacaccgccg tcggacaagg cgaaatttcc aaccgcgcca tccaaaaagc ctgcggcacg
     1741 ctgaacgaac cgccgcccgt acccgtcagc gaaaccacca tcgtcaaaca gtccaaaatc
     1801 aaaaaaggcg gcaaaaacgg cgtgctcatc gacggcgaag acggtctgat gaccacgctt
     1861 gccaaatgct gcaaacccgc gccgcccgac gacattgtcg gcttcgttac ccgcgatcgc
     1921 ggcatttcgg tacaccgcaa aacctgcccc tctttccgac acctcgccga acacgcgccc
     1981 gaaaaagtac tggacgcaag ttgggcggcg ttgcaggaag gacaagtgtt cgccgtcgat
     2041 atcgaaatcc gcgcccaaga ccgctccggg cttttgcgcg acgtatccga cgcgctcgcc
     2101 cgccacaaac tcaacgttac cgccgtgcaa acccagtccc gcgacttgga agccagtatg
     2161 cggttcacgc tcgaagtcaa acaggtcaac gacctcccgc gcgtcctcgc cagcctcggc
     2221 gacgtcaaag gcgtattgag cgttacccgg ctttaaatac aaaaatgccg tctgaaagcc
     2281 gtataacgct tcagacggca ttttgattga cggggtttgc tattttttgt tgcatagt
//
LOCUS       DAWEYF010000205         2319 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.205, whole genome shotgun sequence.
ACCESSION   DAWEYF010000205 DAWEYF010000000
VERSION     DAWEYF010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.205"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WGN93_001915"
     CDS             complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WGN93_001915"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ0227770.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTINDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLQITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGNGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMVVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1627..2193
                     /locus_tag="WGN93_001916"
     CDS             1627..2193
                     /locus_tag="WGN93_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ0227771.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          526 a          565 c          670 g          558 t
ORIGIN      
        1 tcctagttat ctaggacagc cccttaaatt taatccacta tattttcctg tttcaggctc
       61 ggcgttcttt gcacatcagt ttcgcatcca gccagccatc gccgccggag atgatgttgt
      121 tggcaacgaa gttgtccaag tcgggcagca gggaaacggc gcgaccgctg ttgatgatga
      181 cgaccaccac catcggtttg tcgcccagcc agtagcctgc caatgcgcgg acattgttga
      241 gtgtgcctgt tttcaggcgc agaagcccac cgctttgttt gaagcggttg cgtaaagttc
      301 cgtctgtgcc ggcgatgggc agcgtgtcga tgaaatcttg tgcaaacggg ctgaaataag
      361 ccgtttccaa catttgcgcc atcattctcg ccgttaccct ttcttttctg gacagacccg
      421 aaccgttttc caaaaccaaa tccgcaacat cgatgcccga cacggcaagt tcgcgccgga
      481 cggcagatgc cgcctgttcg gaaacggcgg gcagtttgcc gttgccgccg agtttgagga
      541 agacggaacg cgcaatcaga ttgtccgaac gcttgttcat gtccgtcaaa atttccttca
      601 tcggtttggc gtgtgcaacg gcaagcgtct gcgcgccttc cggcgtgtcg gctatgccga
      661 taccgtctga aatccgtccg ccgccgagca gccagtggtt ggtaaaactt tgccggatca
      721 gttcgtcaag cgcgaacatc cggacaccga caggcttgcc caaacagctc tcgggaatat
      781 tgccgcgcaa tttcagcgta ttgtccgaaa aagatgcacg catcagtttt ttgatcgaag
      841 ggcaggcagc ttgggaggcg gtaatttgca agttgttttg ggcgaaaata tgcggcaaag
      901 gcggatcggt gaggatgtcg gtactgtcgg cggcattgcg ttcggcgcgc accataacca
      961 taccggcaga cagcatagtt ggattggggg gcgtcataaa cggcgaaccg ctgtcggctt
     1021 cgaaatcgtc ggggctgccg acttcgcccc acaggctgtg gtcgagcatc aggtgtcccg
     1081 tgatattgcg tatgccttgt tcgcgcaact ggcgttggac ggcaagcagg ttttcctgat
     1141 tgaaaacggg gtcgccgctg cccgcccaat acaggtttcc gtcaagcgtg ccgtcgttta
     1201 tcgtaccgtt gcttttaaac tcggtcgccc agcggtaatt gctgccgaag gttttgaagg
     1261 cggcaaacgc ggtaacgagt ttcattgtgg aggcggggtt gacggggaca tccgagcggt
     1321 ggtcaatgat gacttttccg ctgtcaagct cttggacata tacggcgatt tcgttttgcg
     1381 gaatgcggcc ggtatcgagc gcgtgtgcgg cgagggaggc gagaagcagc agcagggagg
     1441 ccgctgtttt ggggaaattc ataggtaaat ctgttacata aaaaaagcaa ttataaggca
     1501 aagccggata agtgggaacg ctgtggcggc gggccggctt gtttgcaggg gaaatcacat
     1561 atataataat cgctatcatt atgaaatgat tgagacgcac aaacttaata ttcaggagga
     1621 atgattatgg ctaagaaaat cagtattttg gtgggcagcc tgcgccgtgc ttcttttgcg
     1681 cgcaaagtgg cattgaatgc ggcggagatg ttccccgaag gctggcaggc ggaaatcgtc
     1741 gaaatcggac atctgccgct ttacaatttc gattatgacg accctgcggt ggaagatgtg
     1801 ccgctgcccg aaagctacac ggctttccgc gaaacgatta aggcttcgga cggcattttg
     1861 ttcgttacgt ccgaaaataa ccgcaccatt cccgcctgtt tgaaaaatgc ggtggacatc
     1921 ggctcgaaac cgaatgccga cgtggcgtgg aaaaacaaac cggccggtat catcagccat
     1981 tccgtcggca agatgggcgg ttacagttcg caaaaaaacc tgcgccttgc gctgtcttat
     2041 ttcgatatgc ccgtaaccgg acagccggaa gtgtttttgg gcaattcgcc gacgctgttt
     2101 gatgaaaacg gcaaattgat cgactcggca agggattttg ttcagtcata tattaatcag
     2161 tttgttggtt tgattgaaag aaatgccaaa taaacaaacc aagtcgaaag gccgcaaaac
     2221 cggttcgggt tttgcggctt ttttatatgg gctgggcagc gtcaaggttt gccgtttgcc
     2281 ggataatgcg cggcaaatga ccggcgtgtt tatagcgga
//
LOCUS       DAWEYF010000206         2284 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.206, whole genome shotgun sequence.
ACCESSION   DAWEYF010000206 DAWEYF010000000
VERSION     DAWEYF010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.206"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            234..2012
                     /locus_tag="WGN93_001917"
     CDS             234..2012
                     /locus_tag="WGN93_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HEZ0227772.1"
                     /translation="MNKIYRIIWNSALNAWVAVSELTRNHTKRASATVKTAVLATLLF
                     ATVQANATDEDEEEELESVQRSVVGSIQASMEGSGELETISLSMTNDSKEFVDPYIVV
                     TLKAGDNLKIKQNTNENTNASSFTYSLKKDLTGLINVETEKLSFGANGKKVNIISDTK
                     GLNFAKETAGTNGDTTVHLNGIGSTLTDMLLNTGATTNVTNDNVTDDEKKRAASVKDV
                     LNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGKKTEVKIGA
                     KTSVIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTG
                     QADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVMYDVNVGDALNVNQLQNSGWNL
                     DSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSV
                     SLGAGADAPTLSVDDKGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLN
                     NRIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDGG
                     NWIIKGTASGNSRGHFGASASVGYQW"
     gene            2145..>2284
                     /locus_tag="WGN93_001918"
     CDS             2145..>2284
                     /locus_tag="WGN93_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ0227773.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNR
                     YL"
BASE COUNT          699 a          566 c          563 g          456 t
ORIGIN      
        1 ccgccgtcat tcccgcaaaa gcgggaatcc agacccgtcg gcacggaaac ttaccgaata
       61 aaacagtttc cttagattcc acgtcccaga ttcccgcctt cgcgggaatg acgagatttt
      121 aagttggggg aatttatcag aaaaccccca acccccaaaa accgggcgga tgccgcacca
      181 tccgccccca aaccccgatt taaccattca aacaaaccaa aagaaaaaac aaaatgaaca
      241 aaatataccg catcatttgg aatagtgccc tcaatgcctg ggtcgccgta tccgagctca
      301 cacgcaacca caccaaacgc gcctccgcaa ccgtgaagac cgccgtattg gcgacactgt
      361 tgtttgcaac ggttcaggcg aatgctaccg atgaagatga agaagaagag ttagaatccg
      421 tacaacgctc tgtcgtaggg agcattcaag ccagtatgga aggcagcggc gaattggaaa
      481 cgatatcatt atcaatgact aacgacagca aggaatttgt agacccatac atagtagtta
      541 ccctcaaagc cggcgacaac ctgaaaatca aacaaaacac caatgaaaac accaatgcca
      601 gtagcttcac ctactcgctg aaaaaagacc tcacaggcct gatcaatgtt gaaactgaaa
      661 aattatcgtt tggcgcaaac ggcaagaaag tcaacatcat aagcgacacc aaaggcttga
      721 atttcgcgaa agaaacggct gggacgaacg gcgacaccac ggttcatctg aacggtatcg
      781 gttcgacttt gaccgatatg ctgctgaata ccggagcgac cacaaacgta accaacgaca
      841 acgttaccga tgacgagaaa aaacgtgcgg caagcgttaa agacgtatta aacgcaggct
      901 ggaacattaa aggcgttaaa cccggtacaa cagcttccga taacgttgat ttcgtccgca
      961 cttacgacac agtcgagttc ttgagcgcag atacgaaaac aacgactgtt aatgtggaaa
     1021 gcaaagacaa cggcaagaaa accgaagtta aaatcggtgc gaagacttct gttattaaag
     1081 aaaaagacgg taagttggtt actggtaaag gcaaaggcga gaatggttct tctacagacg
     1141 aaggcgaagg cttagtgact gcaaaagaag tgattgatgc agtaaacaag gctggttgga
     1201 gaatgaaaac aacaaccgct aatggtcaaa caggtcaagc tgacaagttt gaaaccgtta
     1261 catcaggcac aaatgtaacc tttgctagtg gtaaaggtac aactgcgact gtaagtaaag
     1321 atgatcaagg caacatcact gttatgtatg atgtaaatgt cggcgatgcc ctaaacgtca
     1381 atcagctgca aaacagcggt tggaatttgg attccaaagc ggttgcaggt tcttcgggca
     1441 aagtcatcag cggcaatgtt tcgccgagca agggaaagat ggatgaaacc gtcaacatta
     1501 atgccggcaa caacatcgag attacccgca acggtaaaaa tatcgacatc gccacttcga
     1561 tgaccccgca gttttccagc gtttcgctcg gcgcgggggc ggatgcgccc actttgagcg
     1621 tggatgacaa gggcgcgttg aatgtcggca gcaaggatgc caacaaaccc gtccgcatta
     1681 ccaatgtcgc cccgggcgtt aaagaggggg atgttacaaa cgtcgcacaa cttaaaggcg
     1741 tggcgcaaaa cttgaacaac cgcatcgaca atgtggacgg caacgcgcgt gcgggcatcg
     1801 cccaagcgat tgcaaccgca ggtctggttc aggcgtatct gcccggcaag agtatgatgg
     1861 cgatcggcgg cggcacttat cgcggcgaag ccggttacgc catcggctac tccagtattt
     1921 ccgacggcgg aaattggatt atcaaaggca cggcttccgg caattcgcgc ggccatttcg
     1981 gtgcttccgc atctgtcggt tatcagtggt aagggctttt tcgcctgtct gctgttggga
     2041 caggcggaag gtttgaaggg aagggtggcg atttgccgcc tgagaccttt gcaaaattcc
     2101 ccaaaatccc ctaaattccc accaagacat ttaggggatg ttccatgagc accttctttc
     2161 agcaaaccgc acaagccatg attgccaaac acatcgaccg tttcccgcta ttgaagttgg
     2221 atcaagtgat tgattggcag ccgatcgagc agtacctgaa ccgtcaaaaa aaccgttacc
     2281 ttag
//
LOCUS       DAWEYF010000207         2276 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.207, whole genome shotgun sequence.
ACCESSION   DAWEYF010000207 DAWEYF010000000
VERSION     DAWEYF010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.207"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..585)
                     /locus_tag="WGN93_001919"
     CDS             complement(<1..585)
                     /locus_tag="WGN93_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ0227774.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSDGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAALS"
     gene            748..2154
                     /gene="dnaB"
                     /locus_tag="WGN93_001920"
     CDS             748..2154
                     /gene="dnaB"
                     /locus_tag="WGN93_001920"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ0227775.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          547 a          591 c          614 g          524 t
ORIGIN      
        1 ggacaaggcg gcaaaacgtt tggcaacttc gtcccagttg acgatttccc agaaaccttt
       61 caggtagttg ggacggctgt tgcggtagtc gatgtaatag gcgtgttccc acacgtcgca
      121 ggtcagcagc ggcgtgtttt cagtggtcag cggcgtagcg gcgttggaag tggaaaccaa
      181 atccaatccg ccggcagggg tttttaccag ccacgcccaa ccggagccga aagtaccggc
      241 cgcgcaggca ttgaacgctt cttggaattt ctcgaagctg ccccatttcg cgtcgatggc
      301 ggcggccagt tcgccggaag gtttgccttg acctttgggc gtgaaaccca gccagtagaa
      361 ggtgtggttc caagtttgcg ccgcgttgtt gaacacgccg tccgaagatt ttttcacaat
      421 ctcttccaaa ggcaggtttt caaattcggt gcctttgatt tgattgttca ggttggtgat
      481 gtaggtttga tggtgtttgc cgtagtggaa ttccaaagtc tctttgctca gatgcgggga
      541 caatgcgtcc agttcataag gcagttgcgg cagcttatgt tccattttgt gctcctaata
      601 ttgttttaaa tgttgtattt tggcagtgtt gctgcaaata gctcagcagc gcacatattt
      661 tacctgtttt gagggatgga aaccaattaa acctgcttta cgctataata gaagattgca
      721 atttcggcac gacagatagg atgtaccatg aacgattacg cagctatgcc gtctgaagac
      781 cgtgaggtcg gcgcattgtc gctgcctcca cattcgatgg aggcggaaca atccgttttg
      841 ggcgggttga tgctggaaaa tccggcctgg gacaggattg ccgatgtggt ttcgggagag
      901 gatttctacc gccacgaaca ccgcctgatt ttccgatcca ttgccaaatt aatcaatgag
      961 agccgtcccg ccgatgtgat tacggttcag gaagatttgc agcggaacga agaattggaa
     1021 gcggcaggcg gattcgaata tctgattacg ctggcgcaaa acaccccgtc tgccgccaac
     1081 atccgccgct acgccgaaat cgtgcgcgag cgttccatca tgcgccaact cgccgaagtg
     1141 gggacggaaa tcgcccgcag cgcatacaat ccgcaaggca gggacgcggg gcagcttttg
     1201 gacgaggcgg aaaacaaagt attccaaatc gccgaaagca ccgccaaatc caagcagggc
     1261 tttttggaga tgcccgattt gctgaaagaa gtcgtacagc gcatcgatat gctctactcg
     1321 cgcgacaatc ccgatgaagt taccggcgtg ccgacagggt tcatcgacct cgacaaaaaa
     1381 acctcgggtc tgcaacccgg cgacctgatt atcgttgccg gtcgtccgtc tatgggtaag
     1441 accgcctttt ccatcaatat cgccgaacac gttgccgtag aaggcaagct gccggttgcc
     1501 gtcttctcaa tggagatggg cggtgcgcaa ctggtcatgc gtatgctcgg ctcggtcgga
     1561 cgcttggatc aaagcgtcct gaaaaccggc aggctcgaag acgaacactg gggtcgtctg
     1621 aacgaagcag tcgtcaaact ctccgacgcg cccgtgtaca tcgacgagac cccgggtttg
     1681 actgcgctcg aactgcgcgc ccgcgcccgc cgtctcgccc gtcaatttaa caataagctg
     1741 ggattgatcg tcatcgacta cctgcaactg atggcgggat ccggccgttc cgacaaccga
     1801 gcttcagagc tgggcgaaat ttcacgttcg ctcaaagcgt tggcgaaaga attgcaagtc
     1861 cccatcatcg ccctgtcgca actgagccgc acggtcgaat cgcgtaccga caaacgcccg
     1921 atgatgtccg accttcgcga atccggtgct atcgagcagg atgccgacct gattatgttt
     1981 atgtaccgcg acgaatacta caaccaagac tcgcccatga aaggccttgc cgaatgtatc
     2041 atcggcaaac accgcaacgg tcccgtcggt aaaatcttcc tcacatggac ggggcaattc
     2101 accaaattcg acaatgctgc ctatattccc gaggaggcaa agatagagga ttaaatggct
     2161 atataaaaat ttattaggcg aaatcaggca aaatcgttta aaatcatgct tagagattgc
     2221 cctaaaaaat aaaacgcggt cttgaggcat ttttgcattc agcccgcata taattg
//
LOCUS       DAWEYF010000208         2216 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.208, whole genome shotgun sequence.
ACCESSION   DAWEYF010000208 DAWEYF010000000
VERSION     DAWEYF010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.208"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="WGN93_001921"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="WGN93_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ0227776.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          564 a          631 c          579 g          442 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgcgccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgacacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaaca
      481 aaatcgacaa gccgtccgct cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttatgct tccggtctgt
      601 ccggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgaatcaa acccggccaa accgttgccg tcatgaacca cgatcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttggaacg cgtgccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggtatcggc gtaaccatca
      961 ccgacaaaga caatcccaaa ggcctaccga tgttgagcgt ggacgaaccg acgctgacga
     1021 tggactttat ggtcaacacc agcccgctgg cgggtacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 ataccgccga tgccgacgtg ttccgcgtat ccgggcgcgg cgagctgcac ctgaccattt
     1201 tgctggaaaa tatgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cgtatgaaaa cctgaccgtg gatgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggtttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccatgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcccggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggtcgta
     1621 tgttcgtatc acccaacgac aaaatctacg aaggtatgat tatcggcatc cacagccgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgcgccagcg
     1741 gcaccgacga agccgtgcgc ctgaccacgc cgatcaagct gacgctggaa ggtgcggttg
     1801 agtttatcga cgatgacgaa ctcgttgaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc actttaaaaa gctggattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggtatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccgtttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaagagg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcaga
//
LOCUS       DAWEYF010000209         2163 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.209, whole genome shotgun sequence.
ACCESSION   DAWEYF010000209 DAWEYF010000000
VERSION     DAWEYF010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.209"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            373..885
                     /locus_tag="WGN93_001922"
     CDS             373..885
                     /locus_tag="WGN93_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ0227777.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            965..2044
                     /gene="aroB"
                     /locus_tag="WGN93_001923"
     CDS             965..2044
                     /gene="aroB"
                     /locus_tag="WGN93_001923"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ0227778.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          529 a          676 c          526 g          432 t
ORIGIN      
        1 ttcagcacct tagagaatcg ttctctttga gccaaggcga ggcaacgctg tactggtttt
       61 tgttaatcca ctatagtatt gataaacata ttatcttcaa tatattcaat tggataattg
      121 tttacctaag caaagataat tgccttttcc tgacaaataa gtgaaatcaa cggattgtca
      181 aaacacagcc tgaaataaaa aacctccctg atttctttta tttgtcctta aaatcagaaa
      241 ggttcgggat ggtcgggtta tttttccaaa cgtaccgccg ccctgccgat ttcgtataaa
      301 attccgccgt aacccgacaa gcccgaaccc tgtcgccccg aaaggcgggg tgtcaaacat
      361 taaggaattg tgatgaaaaa ctttaacggc aaactcatcc tcatcggact gatgggcgcg
      421 ggcaaaacca cgctgggccg gcaaatggcg cagcggctgg attaccgttt ttacgacagc
      481 gatcacgaaa tcgccgtagc cgccggcgtt cccatcccca ccatatttga aatggaaggc
      541 gaacagggat tccgttcgcg cgaaaccgcc atactcaaaa agctggttat cctgccccat
      601 atcgtcctgt ccaccggcgg cggcgcggtg ttaaaagaag aaaaccgcgc ccttatccgc
      661 aaaagcggca cggtcgtcta tctgcacgcc ccgcccgaaa ccctgctcga acgcacgcgc
      721 tgcgacaaca gccgtccttt gctgcaagtt gccgatcctt tggcgaaatt acgtgaactc
      781 tacgccgcac gcgaccccgt ttaccgccaa accgccgact ttaccgtaga atcggcaaac
      841 tgccgggaaa ccgtgcaaac cctgctcaaa cgcttatccc gataaaccgg catatgcgcc
      901 gcgcccagaa aaccaagccg cgccccgccc ggcgggccgg cggttcaaac tttaaggaac
      961 aacaatgaaa acactgaccg tacacacccc gtcccacagc taccccatct ttatcggcaa
     1021 cggactgctg ccgcaggcag gaagcctgct caaaccgcat ttgggcaaac gcgccgccat
     1081 catcgccaac gaaaccgtcg ccccgctcta cctcggcacg cttcagacgg cattggatgc
     1141 ggcaggcgta tcccatttca gcatcatcct gcccgacggc gaggcgcaca aaaactggca
     1201 gacgctcaac ctcatctttg acgggctgat gcaaaaccgc gccgaacgca aaaccacatt
     1261 aatcgcactg ggcggcggcg tgatcggcga catggtcggc tttgccgctg ccacctacca
     1321 gcgcggcgca ccgttcgttc aaataccgac cacactgttg agtcaagtcg actcatcggt
     1381 gggcggcaaa accgccatca accacccgct cggcaaaaat atgatcggcg cattctacca
     1441 gccgcaggcg gtgcttgccg acttggacac gctgcacacc ctgcccgtcc gcgaattgtc
     1501 cgccggtatg gcggaagtca tcaaatacgg cgcgctcggc gacatcggtt ttttcgaatg
     1561 gctcgaacaa aacatatccg gactgatgac gctcgatcgg gaaaaactcg cccaagccgt
     1621 gtaccgctgc tgccaaatga aggcagacat cgtcgcccaa gacgaaaccg aacagggcat
     1681 acgcgcatgg ctcaacctcg gacacacctt cggacacgcc attgaaaccg agatgggtta
     1741 cggcacttgg ctgcatggag aagccatcgc cgccggctgc gtgttggcgg cgcgtttgtc
     1801 cgaacaactg ggcaaaacct ccgccgcaga taccgcgcgg ctcgccgccc tgctcgaagc
     1861 cgctggactg ccgtccgcac cgcccgtgtt tgcctttgaa aaatggctcg aacatatgag
     1921 ccacgataaa aaagtcagcg gcggcatcat gcgctttatc ggtctgaacc ggctgggcga
     1981 agccaacatc accgaaatta ccgacacgga catcctccgc cgcaccctgc aaccgtatct
     2041 ctgatttcct ctgccgatgt gctgccgcgc gggtttgacg cacgatgatg attttccatc
     2101 atctttctcc gtaaaagcgg gaatccggtc cgttcggttt cggtcgtttc cgataaattc
     2161 ctg
//
LOCUS       DAWEYF010000210         2122 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.210, whole genome shotgun sequence.
ACCESSION   DAWEYF010000210 DAWEYF010000000
VERSION     DAWEYF010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.210"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            123..1508
                     /locus_tag="WGN93_001924"
     CDS             123..1508
                     /locus_tag="WGN93_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ0227779.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     DFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            1528..2046
                     /locus_tag="WGN93_001925"
     CDS             1528..2046
                     /locus_tag="WGN93_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ0227780.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
BASE COUNT          448 a          646 c          570 g          458 t
ORIGIN      
        1 ttcaaataaa caggaatata acttcagaca aacaacttac cgcccgattt gtgctatcgt
       61 tttcgcacaa cttaaaaaaa cctgacaatt ttgtactttt attacagaga aaggctttac
      121 aaatggacgg ctggacacag acgctgtccg cgcaaaccct gttgggcatt tcggcggcgg
      181 caatcatcct cattctgatt ttaatcgtca aattccgcat ccacgcgctg ctgacactgg
      241 tcatcgtcag cctgctgacg gctttggcaa ccggtttgcc cacaggcagc attgtcaacg
      301 acgtactggt caaaaacttc ggcggcacgc tcggcggcgt ggcgcttctg gtcggcctgg
      361 gcgcgatgct cggacgtttg gtcgaaacat ccggcggcgc acagtcgctg gcggacgcgc
      421 tgatccggat gttcggcgaa aaacgcgcac cgttcgcgct gggcgttgcc tcgctgattt
      481 tcggcttccc gattttcttc gatgccggac taatcgtcat gctgcccatc gtgttcgcca
      541 ccgcacggcg catgaaacag gacgtactgc ccttcgcgct tgcctccatc ggcgcatttt
      601 ccgtcatgca cgtcttcctg ccgccccatc cgggcccgat tgccgcttcc gaattttacg
      661 gcgcgaacat cggccaagtt ttgattttgg gtctgccgac cgccttcatc acatggtatt
      721 tcagcggcta tatgctcggc aaagtgttgg ggcgcaccat ccatgttccc gttcccgaac
      781 tgctcagcgg cggcacgcaa gacaacgacc tgccgaaaga acctgccaaa gcaggaacgg
      841 tcgtcgccat catgctgatt cccatgctgc tgattttcct gaataccggc gtatcggccc
      901 tcatcagcga aaaactcgta agtgcggacg aaacctgggt tcagacggca aaaataatcg
      961 gttcgacacc gatcgccctt ctgatttccg tattggtcgc actgtttgtc ttgggacgca
     1021 aacgcggcga aagcggcagc gcgttggaaa aaaccgtgga cggcgcactc gcccccgtct
     1081 gttccgtgat tctgattacc ggcgcgggcg gtatgttcgg cggcgttttg cgcgcttccg
     1141 gcatcggcaa ggcactcgcc gacagcatgg cggatttggg cattcccgtc cttttgggct
     1201 gtttccttgt cgccttggca ctgcgtatcg cgcaaggttc ggcaaccgtc gccctgacca
     1261 ccgccgccgc gctgatggct cctgccgttg ccgccgccga ctttaccgac tggcagctcg
     1321 cctgtatcgt attggcaacg gcggcaggtt cggtcggttg cagccacttc aacgactccg
     1381 gcttctggct ggtcggccgc ctcttggaca tggacgtacc gaccacgctg aaaacctgga
     1441 cggtcaacca aaccctcatc gcactcatcg gctttgcctt gtccgcactg ctgttcgcca
     1501 tcgtctgaca gacggaaagg atagtaaatg actacgcatt ttgtcgttat gggcgtatgc
     1561 ggctgcggca agaccaccgc cgcgctgtcc ctgcagaaac acctcggtca atgtccctat
     1621 gccgaaggcg acgagttcca cacccaagcc aaccgcgaca agatgggcgc gggtattccg
     1681 ctgaccgatg aagaccgcta tccgtggttg ggcaatctgc gcgactggat gacgaaacag
     1741 gcgcaaaacg gtgcgaacca caccatcgta acctgttccg ccctcaaacg cggctaccgc
     1801 gacattctgc gcggagccga aggcaaagct gccttcatcc acctcagtcc gccgcaagac
     1861 atcaacctcg agcgcatgat gtcgcgcaaa ggacattaca tgaaagcagg gatgctcgat
     1921 tcgcaactgg aaatcctcga ggaactgggc gaaggcgaat acggagtcaa aatcgccaac
     1981 cccggcacgc ccgaagcggt cgaagccgat attctgaact gggttgcctc ggaaaacctg
     2041 ctttgaagca atatgccgtc tgaagcccga cacaggatgg gtttcagacg gcataaacat
     2101 cgggaacaga atggattaca tt
//
LOCUS       DAWEYF010000211         1999 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.211, whole genome shotgun sequence.
ACCESSION   DAWEYF010000211 DAWEYF010000000
VERSION     DAWEYF010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.211"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            299..1756
                     /locus_tag="WGN93_001926"
     CDS             299..1756
                     /locus_tag="WGN93_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ0227781.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          453 a          594 c          457 g          495 t
ORIGIN      
        1 tgcgcccttc gacgtggcgg atatataagg aagtgatttt ccatctaagt aaaaaccgcc
       61 ctatcggata agcccttaac agaaaaggct ttacccgcgc cgtatcggaa cacatcctct
      121 aaaatacaat ccgttgaatt gaaaaaaata taaaaacatc cgcccgcgaa aaacggcagc
      181 gcgtcgtttg acaaagattg aaaatatcgg ttaaaaaccg attttcatac aaaaaacacc
      241 gctgccgtcc gcatccgttt cagacggtat tgagagaaaa tcttttagga gaacctttat
      301 gtcccggcat cccgccccca ccggagaaaa aacattcttc ggccacccct tccagctttc
      361 caccctcttc catatcgaat tgtgggaacg tttttcattt tacggaatgc agggcatcct
      421 gctgatttac ctctactaca ccgccgacaa aggcggcttg ggcatagaca aaaccctcgc
      481 cggcggcatt gtcggcgcat acagcggcag cgtgtacctg tccaccattt tgggggcgtg
      541 gtttgccgac cgagtatggg gtgcggaaaa aaccctcttc ctctcgggca tcgtcgtgat
      601 gctcggacac atcgtccttg ccgccgcccc gggcctgtac ggccttttaa tcgggctgat
      661 attcatcgca ttgggcagcg gcggcgtgaa atctacggcc agttctatgg tgggcgcatt
      721 atacgaacaa gacgaaatgc gcccgctgcg cgatgcggga ttttccattt tctacatcgc
      781 catcaatatc ggcggcttcc taggcccgct gctgaccggc ctgcttcaag aaaacatcgg
      841 tttccattat ggtttcggcg cggcagcggt cggtatggca ttcggcttgt ggcgttattc
      901 cttgggacgt aaaaacctgc cccaccccac cgtcccccat ccgctttcaa aaggacaggg
      961 caaaactgcg gccgccgtcg gcattgctct catcgccgca cttgcaaccg ccatcaaaac
     1021 ggggcttgtc aacctcgaca atttctccgg catcctctta tctaccgtca tccttgccgt
     1081 cattgcctat ttcgcccgcc tgctgaccaa cccccgcgtc agttccgaca acaagcggca
     1141 catcatcgcc tacatcccgc ttttcctgac catctgtatg ttttgggccg tctggtttca
     1201 gatttacacc gtagcaaccg tctatttcga cgaaaccgtc aaccgcacca tcggttcgtt
     1261 taccgtgccc gtcgcctgga aagattccat gcaaagcctg tgggtcatcc tgttttccgg
     1321 actgatggcg gcaatgtgga caaaaatggg gcgcaaacag cccaaaaccc cgctgaaatt
     1381 cgctatggcg gtatttgtta ccggcgcgtc gtttttggga ttcgtcccct ttatttccgc
     1441 cggcacgccg atgcctattg cggttttcgc actgattgtc cttgccatca cgataggcga
     1501 actgatgatt tccccgattg cgctgtccat ctccaccaaa atcgcaccgc ctttattcaa
     1561 aacccaaatg gtcgccctta atttccttgc cttttcatta ggcttcactt tgggcggcgt
     1621 attgtttgaa aaaggctatc aggcgggcga cgaaatcggc ttctatcggc tgctgttcta
     1681 catcggcgca gccacaggct tcctgctgct cctgctcgtc cccaaattga acaaaatgct
     1741 cgaaggcaca gactaagtcc cgccccgatg ccgtctgaac ccttcagacg gcatttttcc
     1801 gcataatgaa accaaaccgt ttccacccga caggacaggc tccccccaac cggaaggcag
     1861 cctgccgatt gtcatttaaa tatctgactg attccgtctg tttgcaaggg aaatagccgt
     1921 ttatttccgc ttgggcggaa accggttcta ttgagtaaaa ggcattttat ccgactaaat
     1981 tagtgctgca tcaacggaa
//
LOCUS       DAWEYF010000212         1938 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.212, whole genome shotgun sequence.
ACCESSION   DAWEYF010000212 DAWEYF010000000
VERSION     DAWEYF010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.212"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(4..1260)
                     /locus_tag="WGN93_001927"
     CDS             complement(4..1260)
                     /locus_tag="WGN93_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ0227782.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEEIEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQNLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
     gene            complement(1608..>1938)
                     /locus_tag="WGN93_001928"
     CDS             complement(1608..>1938)
                     /locus_tag="WGN93_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227783.1"
                     /translation="VKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAYCLSM
                     LPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFTLAKE
                     IGKQKNI"
BASE COUNT          456 a          415 c          478 g          589 t
ORIGIN      
        1 ggtttatttg cgttgcaata cggcggcgaa gaagccgtcg gtttggtgct ttgccgaatc
       61 gaggcgcagg tattttccgg tatccaaatc aatcttcagg ttttgcagca gttcggcgca
      121 gttgacgggt tcaaattcgg gatgttcgga caggaaacgt tcgacttgca gctcgttttc
      181 ttcgggcagg atgctgcaag tggcgtaaac caagcggcct tgcggtttta ccagtttgga
      241 ggcagcatcg aggatgctgt gttgctgttc caaaaggttg gccacggtct cggcagattg
      301 gcggtatttg aggtcgggat tgcggcgtaa agtacccaaa ccggagcagg gcgcgtccac
      361 caacacacgg tcggctttgc ctgccagtcg ggcgatacgg ctgtcgtgtt cgctgctgat
      421 gcgttcgggg tggatattgg tcagtccggc gcgggtcata cgcggtttga ggttggcaag
      481 gcgtttttcg gcgatgtcga aggcgtagat tctgccttta ttggccattt gcgcaccgac
      541 agccaaggtt ttgccgccgg caccggcaca gaaatcgaca atgatttcgc cgcgttttgc
      601 gcccaccaat aaagcaagca gctggctgcc ttcgtcttga acttccagcg taccgtccaa
      661 aaacagctcg tgtttgttaa gcgcgatttt gtttttcagg cggatgcccc aaggcgaata
      721 aggcgttgcc tctgcatcgg cactttcggc ttgcaacaat ggcagcactt tatcgcgttt
      781 gcctttcaag gtattgacgc gtatatcgag cggcgcagct tggttgatgc tgcggccgaa
      841 ggcgaggatt tcttcttcgc gccaatgctg ctgcagctgt tctaccagcc attgcggcaa
      901 ttctgcggcg gtattcaggc cgtctgaaaa ctcggtttta cgggctttca aattgccgag
      961 aaactctatt tcttcttcat caagcaggtc tttgatttgg ctgatgttgg tgcttctgcc
     1021 gagaaccagt gcggcgagtg cggctttgcg cggctgcgcg tgcggacggc gcagggcggt
     1081 actgattttt tgatagtggc gcagcgcggc aaaggcggtt tcggcgattt cgtggcggtc
     1141 ttggcggccg agctttttgt gttcgcggaa ataggcggag aggacggcat cggaaggctg
     1201 tttgaaagtc agcatttcag ccaaaacttt ggcggtatgg tcgagttgtg cggcgttcat
     1261 aatgtaatgg gttctcttac tgtgggttat tcataatcaa tctaacgtcc ttaaaataac
     1321 aatagcatct ttatcattac ttagtattct atccgcaata agaaagatgt gttaaaagtg
     1381 cgcaatcggg atttgtctaa atttctccgt taactacaaa ggcagcctga aaaaagttct
     1441 attttcaggt cgcttgaaca gcatccgata taatcacatc agcgatttca ttttgtaatc
     1501 actccctaaa acatgaggaa aaaaacaaaa tttattttct tcgttcagta tatctatcct
     1561 aaatatgcca tcactccatt gagtttttaa tttgtatttc gctcttgtta aatgtttttc
     1621 tgtttgccga tttcttttgc taatgtaaaa aatactctac cactctcatt ggttaaagtt
     1681 ttcaagtatt catcaacatc agtaacatta ataacaactg tttcatttgt atgtttatta
     1741 aattctaaat caataataat attcccatta accaatattt catatatatc ttcttcttca
     1801 gggagcatag acaaacaata agcacttgaa gctgaaaact cttttttcag atactgaaga
     1861 agaaaagtat ttttaattaa aatattatta aatttatcta atgattgctt gacttcttta
     1921 gttgtccaat ttttaaca
//
LOCUS       DAWEYF010000213         1935 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.213, whole genome shotgun sequence.
ACCESSION   DAWEYF010000213 DAWEYF010000000
VERSION     DAWEYF010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.213"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            238..1778
                     /locus_tag="WGN93_001929"
     rRNA            238..1778
                     /locus_tag="WGN93_001929"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          518 a          415 c          589 g          413 t
ORIGIN      
        1 tgctgcagaa gcggcggacg aactgaaaag tatagcacag aatgttgggg atatcgagag
       61 atatcttgac aggcggaaga gatactttat aattcgcaac gctctttaac aaaacagatt
      121 accgataagt gtgagtgcct tgagcctcac actgtttgaa agacagacaa gataatgttt
      181 tgaacattgt cctgttggtt tctttgaagc agaccagaag ttaaaaagtt agagattgaa
      241 cataagagtt tgatcctggc tcagattgaa cgctggcggc atgctttaca catgcaagtc
      301 ggacggcagc acagagaagc ttgcttcttg ggtggcgagt ggcgaacggg tgagtaacat
      361 atcggaacgt accgagtagt gggggataac tgatcgaaag atcagctaat accgcatacg
      421 tcttgagaga gaaagcaggg gacctttggg ccttgcgcta ttcgagcggc cgatatctga
      481 ttagctggtt ggtggggtaa aggcctacca aggcgacgat cagtagcggg tctgagagga
      541 tgatccgcca cactgggact gagacacggc ccagactcct acgggaggca gcagtgggga
      601 attttggaca atgggcgcaa gcctgatcca gccatgccgc gtgtctgaag aaggccttcg
      661 ggttgtaaag gacttttgtc agggaagaaa aggctgttgc taataccagc ggccgatgac
      721 ggtacctgaa gaataagcac cggctaacta cgtgccagca gccgcggtaa tacgtagggt
      781 gcgagcgtta atcggaatta ctgggcgtaa agcgggcgca gacggttact taagcaagat
      841 gtgaaatccc cgggctcaac ccgggaactg cgttctgaac tgggtgacta gagtgtgtca
      901 gagggaggta gaattccacg tgtagcagtg aaatgcgtag agatgtggag gaataccgat
      961 ggcgaaggca gcctcctggg acaacactga cgttcatgcc cgaaagcgtg ggtagcaaac
     1021 aggattagat accctggtag tccacgccct aaacgatgtc aattagctgt tgggcaactt
     1081 gattgcttag tagcgtagct aacgcgtgaa attgaccgcc tggggagtac ggtcgcaaga
     1141 ttaaaactca aaggaattga cggggacccg cacaagcggt ggatgatgtg gattaattcg
     1201 atgcaacgcg aagaacctta cctggtcttg acatgtacgg aatcctccag agacggagga
     1261 gtgccttcgg gagccgtaac acaggtgctg catggctgtc gtcagctcgt gtcgtgagat
     1321 gttgggttaa gtcccgcaac gagcgcaacc cttgtcatta gttgccatca ttcagttggg
     1381 cactctaatg agactgccgg tgacaagccg gaggaaggtg gggatgacgt caagtcctca
     1441 tggcccttat gaccagggct tcacacgtca tacaatggtc ggtacagagg gtagccaagc
     1501 cgcgaggcgg agccaatctc acaaaaccga tcgtagtccg gattgcactc tgcaactcga
     1561 gtgcatgaag tcggaatcgc tagtaatcgc aggtcagcat actgcggtga atacgttccc
     1621 gggtcttgta cacaccgccc gtcacaccat gggagtgggg gataccagaa gtaggtaggg
     1681 taaccgcaag gagtccgctt accacggtat gcttcatgac tggggtgaag tcgtaacaag
     1741 gtagccgtag gggaacctgc ggctggatca cctcctttct agagaaagaa gaggctttag
     1801 gcattcacac ttatcggtaa actgaaaaga tgcggaagaa gcttgagtga aggcaagatt
     1861 cgcttaagaa gagaatccgg gtttgtagct cagctggtta gagcacacgc ttgataagcg
     1921 tggggtcgga ggttc
//
LOCUS       DAWEYF010000214         1892 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.214, whole genome shotgun sequence.
ACCESSION   DAWEYF010000214 DAWEYF010000000
VERSION     DAWEYF010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.214"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            237..1196
                     /locus_tag="WGN93_001930"
     CDS             237..1196
                     /locus_tag="WGN93_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227784.1"
                     /translation="MYQNYDIVILSLGNGLLTRFFRNSSKLNLTLPIVITLFPGVIFG
                     DSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPILRKKHHCSDGNKV
                     YFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDITVHEDKYSYAELA
                     KNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGVISDLGVDKKYAN
                     THFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLLEVTSTQPPSFDN
                     YFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1244..>1892
                     /locus_tag="WGN93_001931"
     CDS             1244..>1892
                     /locus_tag="WGN93_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HEZ0227785.1"
                     /translation="MQKIRKAVFPVAGMGTRFLPATKASAKEMLPIVDKPLIQYAAEE
                     AVAAGCTELIFITGRNKRNIEDHFDKAYELETELEMREKHKLLGYVQKILPDHVSCIF
                     IRQAEALGLGHAVLCARPAVGNEPFAVILADDLIDAPQGALKQMVDIYNQSGNSILGV
                     ETVDPSQTGSYGIVEVEQLKSYQRVTNIVEKPKPEDAPSNLAVVGRYILTPRIFDL"
BASE COUNT          636 a          310 c          334 g          612 t
ORIGIN      
        1 acttaatatc taatatttaa aatacaatga ataaaaaacg agtcctatta attgctagtt
       61 atgattcttt tttgaatact ggatatgctg ttgcaaaaga aattaactat tcaacaatcg
      121 atatttatat ccaccaaaca aaaaaaaata ttctttcgga atcacaatta agtttaaatg
      181 ggctttcttt aaaagaaatc aatttttttc atattgatga ttatttcgac aaattaatgt
      241 accagaatta tgatattgtt attctatcat taggtaatgg tttactgacg cgtttttttc
      301 ggaatagtag caaacttaat ttaacattac ctatagtaat tactctattt ccaggggtaa
      361 tttttggtga ttcagaaagt attataacta ggttaggtgc taatatttta ttgttcaata
      421 attattatga ttaccaaata ggcaataagt tcaaagaacg ttacaactta tcgtgtacaa
      481 atattttata tggttatcct atcctacgaa aaaaacacca ttgctctgat ggcaataaag
      541 tttatttcat tgatcaagta aaaattccag atggaaaaaa agaaagatta ttaattctaa
      601 aaaaattaat agcactggct aatcgctatc cacataaaga tttagtacta ttattacgtg
      661 tccatcaaaa tgatatcaca gtacatgaag ataaatactc ttatgctgaa ttagcaaaaa
      721 atatgaaatt gcctgataat tttaaaatag agagaaaacg gacacaagat gccttacaag
      781 aaatgggata ttgtttatca ttctcttcaa caatgttatt tgaagctgaa agctgcggaa
      841 ttcctattgg tgtcattagt gatttagggg ttgacaagaa atatgccaat acacatttca
      901 aagatagtgg tgttttggtt aatttagata cggtagactt ggactctcca aataccatta
      961 atccaacttg ggctgaacta tatactaatc cagatagcct ctcttcaaaa gagtttaacc
     1021 aattattaga ggttacttct actcaaccac ctagttttga taattatttt attgcagtta
     1081 atgacgttca gcctgtatct atggttctgt tacgtaaatt taaaaagctt atatatcatc
     1141 ctaagcaatt ctttgttgat tcaaaactat ataaattaat taaatttact aaataatttt
     1201 tactatgggt tgccttattt atttcaaagg agtgacataa aaaatgcaaa aaattcgtaa
     1261 agctgtattc cctgtagctg gcatgggaac ccgattctta cctgccacga aagccagcgc
     1321 taaagaaatg ctgccaatcg tggacaaacc gttaattcaa tatgctgcgg aagaagccgt
     1381 tgccgcgggt tgtactgaat tgatttttat caccggccgt aataagcgta atattgaaga
     1441 ccacttcgat aaagcctatg agttggaaac tgaactggaa atgcgtgaaa agcataaatt
     1501 gcttggctat gtgcaaaaaa ttctgcctga tcatgtcagc tgtattttca ttcgtcaggc
     1561 agaagctttg ggcttgggtc atgcggtatt atgcgcccgt cctgctgtcg gtaatgagcc
     1621 ttttgccgtg attttggccg atgacttgat tgatgcacca caaggcgcac tcaagcagat
     1681 ggtagatatt tacaatcaaa gcggcaacag cattttaggg gtagaaacag tcgatccttc
     1741 gcaaaccggt tcatacggca ttgtcgaagt ggaacagctg aaaagctatc agcgtgtaac
     1801 caatattgtg gaaaaaccaa agcctgaaga tgcgccgtca aatttagcgg tagtcggccg
     1861 ttatattttg acaccgcgta tttttgattt gc
//
LOCUS       DAWEYF010000215         1863 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.215, whole genome shotgun sequence.
ACCESSION   DAWEYF010000215 DAWEYF010000000
VERSION     DAWEYF010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.215"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..650)
                     /locus_tag="WGN93_001932"
     CDS             complement(<1..650)
                     /locus_tag="WGN93_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227786.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEHYLNRQRTR
                     YLRDHRGRPAYPLLSMFKAILPGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYRNWLAQDDTLSELLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQHQAIE
                     VDNKGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHE"
     gene            935..1606
                     /locus_tag="WGN93_001933"
     CDS             935..1606
                     /locus_tag="WGN93_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ0227787.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
     gene            1668..>1863
                     /locus_tag="WGN93_001934"
     CDS             1668..>1863
                     /locus_tag="WGN93_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ0227788.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNR
                     YLRDHRGRPAYPLLSMFKAVL"
BASE COUNT          456 a          421 c          482 g          504 t
ORIGIN      
        1 cactcatggg cattggcggg agtaatgtgc agtttctcga tatagccttc tgcatcggta
       61 cgggtatgtt gtttgtaacc gagtttgtag aggccgtttt tcttgatcca acgggcatcg
      121 ctgtccttac tcggtgtggt ttggccgctg acttgtcctt tgttatcgac ttctatagcc
      181 tggtgctgtt tgctgccggc ggtctgaata atggtggcgt caacgacggc ggcggatgct
      241 ttctctactt ttaggccttt ttcggtcagt tgtcggttga tcagtttgag caattcggac
      301 agggtgtcgt cttgcgccag ccagttgcgg tagcggcata aggtgctgta atcagggatg
      361 ctcagttcgt cgaaacggca aaacaggttg aagtcgatgc gggtgatgag gctgtgttcg
      421 agttcgggat cggagaggct gtgccattgt ccgggcagga tggctttgaa catggacagc
      481 aggggatagg cgggacggcc gcggtggtct cggaggtaac gggttctttg acggttcagg
      541 tagtgttcga tcggctgcca atcaattacc tgatccaact tcaatagtgg gaagcggtcg
      601 atgtgtttgg caatcatggc ttgtgcggtt tgttgaaaga aggtgctcat gagaaatccc
      661 ctaaatgtct tggtgggaat ttaggggatt ttggggaatt ttgcaaaggt ctcaaacgga
      721 tgaaatcaac cgatattcaa acacagtcat ttttagcgca ttttcagcgt atcgttaatg
      781 cggaaaattt cgtgaacagg ttttttgcac aggtctccgc ctcgtttcgc gggatgggaa
      841 accgtattag aaaacggacg cacgcaacat aaaccccgaa agtgatgata agatgatgat
      901 ttaacgtact gctttaatta tttaaggaat tatcgtgttt cccgacaaat acaagttgag
      961 tttagaagaa aatatttttc tggcaaagaa agtattggtt gcccaaattc acaacctcag
     1021 ccgttttgag aattgtcaga cgaccttgtt gcagaccgaa caaattatcc atggcaaaaa
     1081 tgtagcctcc gcgtcactgg aagacatcca aaccatcttg aacctgaaac gtgcctatca
     1141 atatgtgatt tcgcatattt caaacggcga accggtcgat atttcactcc ttaaaaaaat
     1201 caacaacatt gttgccaagg acgattcttt ggcacccggt gatttccgta ccggttcggt
     1261 cggcgtaacg ctattggacg gttcccgtca tgccccaaat ccggtgaagg aaattgaagt
     1321 ggctcgcgtg ttacaaaata tcggactgca aagcggttcg acgacggagg cagccgtccg
     1381 ttttatgctt tattgtatgc ggcagcaggt tttttgggac ggcaacaaac gaacggcaac
     1441 cttatttgcc aacggtctga tgatggcggg gggctgcggc atcttggaaa tctccgaaat
     1501 gcagatgccg caattcaatg aaaaactgtc cgcattctat cgctccggcg acgataccga
     1561 tatttccaag tttgtgtatc aaaattgtat atcgggcata gactgagacc tttgcaaaat
     1621 tccccaaaat cccctaaatt cccaccaaga catttagggg atttctcatg agcaccttct
     1681 tccggcaaac cgcccaagcc atgattgcca aacacatcga ccgcttccca ctattgaagt
     1741 tggatcaggt aattgattgg cagccgatcg agcagtacct gaaccgtcaa aaaaaccgtt
     1801 acctccgaga ccaccgcggc cgtcctgcct atcccctgct gtccatgttc aaagccgtcc
     1861 tgc
//
LOCUS       DAWEYF010000216         1848 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.216, whole genome shotgun sequence.
ACCESSION   DAWEYF010000216 DAWEYF010000000
VERSION     DAWEYF010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.216"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            79..1248
                     /gene="metZ"
                     /locus_tag="WGN93_001935"
     CDS             79..1248
                     /gene="metZ"
                     /locus_tag="WGN93_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ0227789.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1343..1549
                     /locus_tag="WGN93_001936"
     CDS             1343..1549
                     /locus_tag="WGN93_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ0227790.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(1648..1760)
                     /locus_tag="WGN93_001937"
                     /pseudo
     CDS             complement(1648..1760)
                     /locus_tag="WGN93_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          451 a          480 c          471 g          446 t
ORIGIN      
        1 ggtttaaatt taatccacta taaattaaac aacgggcgca cgctccgttg ccgaacggat
       61 aaaaccgagg aatcaccgat gagcaaaaaa ctccatccgc aaacgctcgc catacgcggc
      121 ggcaaagaac aaaccgaata ccgcgaacac aatcaggcat tgttcctgac cagcagcttc
      181 atgtgggaca acgcccaaca cgctgccgat ttgttttcaa aaaaaatcaa aggcttcact
      241 tatacccgta ccgccaaccc gactacagcc gcctttgaaa aacgcatcgc cgctttggaa
      301 ggtgcggaac gcgcggtcgc cacttcgacc ggcatgtccg cgattcaggc ggcgtttttc
      361 acctttttgc aggcgggcga ccatgtgatt tccagccgca gcctgttcgg cacgaccgtc
      421 ggctttatca ataacatcgt taccaaattc ggcatcgaag tgagtcacgt gtcgccgact
      481 gatataaacg aatggaaagc cgccgtcaaa gccaacacca aactgctgtt tttggaaacg
      541 ccgtccaatc ccttgggaga agtggccgac ttggaagcct tggcggaatt ggcgcacggc
      601 atcggcgcgc tcttggtggt ggacaacagc ctgctgtcgc ctgtcggctc tcagcctttg
      661 aaacacggcg cggatatttc cgtttcctcc gcgaccaaag ccatagacgg acacgggcgc
      721 gtgatgggcg gcgtgttggc gggttcggaa gaactgatgg cgcaggtcgc cgtttactgc
      781 aactcttgcg ggctggcaat gtcgccgttt aacgcatggc agttgttgag cggcgtggaa
      841 accctgtctc tgcgtatgga aaaacagttc gacaacgcct tgaaaatcgc gcaatggctg
      901 caagcgcagc cgcaggttca agccgtgtat tacaccggat tacccgacca tcctcaggcg
      961 gagcttatcc gcaaacagca aaacggcggc ggcatcgtca tcggctttga agtcgccgac
     1021 caagcagccg cgtggaaagt cgtggacggc gtcgaacttt tctcccgtac cgccaacctc
     1081 ggcgacgtgc gctcgaccat tacccatccg tggacaacca cgcacggcag gatgcagccc
     1141 gaagaaaaac tcgccgccaa catccgcccc ggattggtgc gcctgtcggt cggtttggaa
     1201 tatgttggcg atttgattga cgatttgaaa caggcactcg cgcgctgatt gcgtgttcag
     1261 acggcatcgg cggaaaaaca ccgcaaatgc cgtctgaaac ccttatctta tatgacatac
     1321 acgtcaacaa taggaaaaaa atatggatga agcggttttt gccgattggg cgttgaaaat
     1381 ctgcctgacc ggcttgatta tttttttggg ttttatcgtt tggaatttgg gcaaggagtc
     1441 taaagcgggc aaattcggca tcgccatttt gtttttggtt ttgggcttgg gcgtgtttgg
     1501 ttttgtgttc aaagagttat tgattaagtt tttggtattg ccgaaatagg tttgcggtct
     1561 gtcaaaatgc cgtctgaaat cataaaaagt aatctgcacc ctaaaagttt gatttaaccg
     1621 ccaactgatt aaggtgcgga tttttatgac aaaatatagt ggattaacaa aaaccagtac
     1681 ggcgttgcct cgccttgccg tactatttgt actgtctgcg gcttcgtcgc cttgtcttga
     1741 tttaaattta atccactata aaaatcatct ttccgcagtc attcccacgg atgcgaaagc
     1801 ctgtcttttt gaatcccgga taattttaca tcgtcattcc cgcgcagg
//
LOCUS       DAWEYF010000217         1835 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.217, whole genome shotgun sequence.
ACCESSION   DAWEYF010000217 DAWEYF010000000
VERSION     DAWEYF010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.217"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            31..243
                     /locus_tag="WGN93_001938"
     CDS             31..243
                     /locus_tag="WGN93_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HEZ0227791.1"
                     /translation="MELETVVPPEEGEGEREGADGEMPEYLELHGGREDDISAPSQPE
                     PPTRNIKPLLFGLLIAFLGYLLGKIF"
     gene            278..1789
                     /gene="ubiB"
                     /locus_tag="WGN93_001939"
     CDS             278..1789
                     /gene="ubiB"
                     /locus_tag="WGN93_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ0227792.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT          403 a          499 c          494 g          439 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactacat atggagttag aaacggtcgt gccgccggag
       61 gaaggtgagg gcgaaagaga gggcgcggat ggggaaatgc ccgaatatct tgaacttcat
      121 ggcgggcggg aagatgatat ttccgcacct tcgcaacccg aaccgccgac ccgcaatatc
      181 aaaccgctgc ttttcgggct gctgattgcc tttttgggct atctgctcgg taagattttt
      241 tgattgtccg ataaatgctg tattcgggat tttatatatg aaatggttga aacgcctgac
      301 ggtcattgtc gggacttttt accgctatcg gctggcaggt ctgtgtgctt cgctgatggg
      361 tagcggttgg atatgcgctc tgctgaaaat gatgccgcag tcgtccaaat tgaaaaacga
      421 accgcctgcc gtccgtctgc gccttgcctt ggaaagcctg gggccgattt tcatcaagtt
      481 cgggcaggtt ttgtccacac gccccgattt gattccgcac gattacgccg tcgaactggc
      541 aaagctgcaa gacaaagtgc cgccttttga cgcgcggctt tcgcgtgaac aaatcgaaaa
      601 atcgttgggt cagtccatcg aaaagctgta tgcggaattt gaaaccgagc ccatcgccag
      661 cgcgtccatc gcccaagtac acaaagcccg cctgcattcg ggcgaacgag tggcggttaa
      721 agttttgcgc cccaaccttt tgccccttat cgaacaggat ttgtcgctga tgcgtttcgg
      781 cgcggcctgg gtcgaacgct tgttttcaga cggcaggcgt ctgaagccgc tcgaagtggt
      841 ggcggagttc gacaaatacc tgcacgacga gttggatttg atgcgcgaag ccgccaatgc
      901 cggacagctc gggcgcaatt tccaaaacag caatatgctg attgtgccca aggtgtttta
      961 cgactactgc accagcgacg tgctgacaat cgaatggatg gacggcacgc cggttgccga
     1021 catcgccaaa ctcaaagcag acggcatcga tttgcacaaa ctcgccgatt acggcgtgga
     1081 aatctttttc acgcaggtct tccgcgacgg ctttttccac gcggatatgc accccggcaa
     1141 tattttggtt gccgccgaca accgctacat cgccctcgat ttcggcatcg tcggcacgct
     1201 gaccgattac gacaaacgtt atctcgccat caatttcctc gcctttttca accgcgatta
     1261 ccggcgcgtc gccaccgccc acatcgaatc gggctgggtg cctgccgaca cgcgtgcgga
     1321 agaattggaa gccgccgtcc gcgccgtgtg cgaaccggtg ttcaacaaac cgatttcgca
     1381 gatttccttc ggcttggtgc tgatgcgcct gtttgaagtc agccgccgct tcaatgtcga
     1441 aatccaaccg cagcttgtgc tgctgcaaaa aacgctgctc aacatcgaag gcttgggccg
     1501 ccagctcgat cccgatttgg acttgtggaa aaccgccaaa ccgtttttgg tgaaatggat
     1561 gaacgggcag gtcggcccta aagccctttg gcgcaacctc aaaaacgaag cccccgactg
     1621 ggcgcaaatc atcccttcat tgccgcgcaa aatcagtgcg ttgattgatg aaaaccgcca
     1681 gcaggaaatg cgtgatgcct atatccattt ggtcaaagtg cagcagcggc aaagcctgtg
     1741 gctggctgtg attgcggttg ttttgctgct gattttgctt ttgaaatagg ctttgtccga
     1801 atcatcgccc gactccgccc gtttataagg aaatc
//
LOCUS       DAWEYF010000218         1830 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.218, whole genome shotgun sequence.
ACCESSION   DAWEYF010000218 DAWEYF010000000
VERSION     DAWEYF010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.218"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            324..1769
                     /gene="zwf"
                     /locus_tag="WGN93_001940"
     CDS             324..1769
                     /gene="zwf"
                     /locus_tag="WGN93_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ0227793.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT          500 a          423 c          485 g          422 t
ORIGIN      
        1 aaggtatacc gtctgaaagt gggaagcggg tgttattata gtacaaaatt tgtaattttg
       61 ttacaaaaaa atcagacatc gaaaagaaat ttgatttaaa tcgcagaatc tttcgattgt
      121 tgtaacggaa taggggaaac ctgcccgatt tttggactag gtcaaataaa ttgtaaaaat
      181 tgggaataga caaaaagtgt agcggtgtgt agtattacta ctcattatgc cgcctgcctt
      241 tgtttccgat attgcgatgc agcgtgatgg gggaaacagg tttcagacgg catcgaaaaa
      301 ttctttcctg acgagataat acgatgagta cacaaacaaa ttttgatttg gtgttgttcg
      361 gtgcgaccgg cgatttggcg atgcgcaagc tgttgccctg tctgtaccag gcgcatgttg
      421 ccggtctgct tcatcccgaa gggcgtattt tgggggtcag ccgcagcgag ttggataccg
      481 aaggttttct ggcgaaggta gaaaccagtt ccaaaatcca tgtgaaagaa aatttttccg
      541 atgaggcttg ggcatcgttt gtcgaacgtt tcgcatatct caaagtcgat gttacgcagc
      601 cggacgattt tgccgctttg ggcgatttgg tcaaagcgcg caaagaaacc gacaatgtcg
      661 tcatctatct ttccaccgcg ccgaaattct tcgcgcaaac atgtgaaaac cttgccaaaa
      721 tcggtttgaa cgccgacaac gtgcgtgtgg ttttggaaaa accgttgggt acggatttgg
      781 cttcttccca gcaaatcaat accgatgttg cgcgttattt caaagaaggg caaatttacc
      841 gcatcgacca ctaccttggc aaagaaagcc tgcaaaacct gcttgcgctg cgttttgcca
      901 atgtaatgtt cgagccgctg tggaacaata aatacatcga aagcgtgcag ttgaccatcg
      961 ccgaacagct cggtgtggaa gagcgcggcg agttttacga cattactggc gccttgcgcg
     1021 atatggtgca aaaccacttg atgcaaatgc tgtgcatgac tgcgatggaa gcccccgcca
     1081 gcttggatgc cgacgcggtg cgcgatgaaa aagtcaaagt catcaagtca ttgaagccgc
     1141 tgaccgtcga atctgtcaat gaaaatgtcg tgcgcggaca atataccgcc gccaaaggca
     1201 tgaacggcta tcttgaagaa atcaacgttc cgcaagacag ctttaccgaa acctacgtcg
     1261 ccattaaagc cgaaatcgaa aacgaacgct ggaagggcgt tcccttctac ctgcgtaccg
     1321 gcaagcgcat ggcgggcaaa gtggcggaaa tcgttttgaa cttcaaagat ttgaacagcc
     1381 atatttttga aggcagccgc accgcgccca accggctcgt tatcgagttg caaccatatg
     1441 aatccgtgcg cctctatacg cagatgaaaa ccccgggggc aggaaataag gtcgaaaccg
     1501 tgccgctggc aaccgatttg ggcaaagcat tggaaagccg ccgcgcggaa gcttacgagc
     1561 gcctgctgct ggatgtgatt aacggcaaac tcgctttgtt caaccgccgc gacgaacttg
     1621 aagccgcgtg ggaatatgtg atgccgattt tggaaaactg gacaaataac accacgccgc
     1681 cgcacggcta cggcgcacac tcgtgggggc ctgaagccgc gcgcgaacta ttggcgcgcg
     1741 acggacacaa gtggcacgaa gagcagtaat acaataatgc gttcagacgg catggggttt
     1801 gaaatgccgt ctgaacgcaa gtaaagcagt
//
LOCUS       DAWEYF010000219         1783 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.219, whole genome shotgun sequence.
ACCESSION   DAWEYF010000219 DAWEYF010000000
VERSION     DAWEYF010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.219"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            216..1688
                     /gene="pyk"
                     /locus_tag="WGN93_001941"
     CDS             216..1688
                     /gene="pyk"
                     /locus_tag="WGN93_001941"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ0227794.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVTAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          459 a          518 c          483 g          323 t
ORIGIN      
        1 agctccaaaa ataaatttag cctaagtcat aaaaccgtgt aattttgcac caaaaaagac
       61 ggtttgcagg taaaatatca aactattaat ttaaatcata tttttacaga atattccgcc
      121 gcattcatca aatggacatc aaaccggttc caaatttctg taattttgca acaaaatacc
      181 gcaaaacacc cgattgagac cgaaaggact ttcatatgaa ccagacaagc cgcgatctga
      241 cccgcatcag ccacaacacc aaaatcgtcg ccaccttggg gccgggcagc aacaacgtcg
      301 aactgttgga agacatgatc cgcgtcggcg gtctgaacgt cgtccgcttc aacttcagcc
      361 acggcacgcc cgaattccat caggaaaacg cccgcattgt gcgcgaggcg gcaaaacgcg
      421 ccggacagga aatcgccatc attgccgacc tgcaagggcc gaaaatccgc gtgggcaaaa
      481 tcgccggcgg cggcatcgaa ttgaacaaag gcgaaacgct ggtactggat gccgcgctcg
      541 aaggcgaagg cacgcgcgag gcggtcggtt tggactaccg cgacctgccc gacgacgtta
      601 ccgcaggcga cgtattgtgg ctggacgacg gcctgctgac cctgaccgtg gaatccgtcg
      661 aaggcagcag gattatcaca agggtggaaa acagccacgt cctgaaaagc aacaagggca
      721 tcaacaaacg cggcggcggt ctatctgcag gcgcgttgac cgaaaaagac ttccgcgacc
      781 tgaaaaccgc gattgccatc ggttgcgact acctcgccat cagctttgtg aaatccgccg
      841 aagatttgca tatcgcgcgc gccaaagtcg aagaagaaat gaagggcagc actgccgtgc
      901 gccccggttt ggtttccaaa atcgaacgcg tagaagcgat tgaaaacctt gatgaaatca
      961 tcctcgccgg cgacggcatt atggttgcgc gcggcgactt ggcggtcgaa gtcggacacg
     1021 ccgccgtccc cgccctgcaa aaacggatga tccgccgcgc ccgcgagttg cgccgcttca
     1081 gcattacggc gacgcaaatg atggaatcga tgattaccaa ccccgtgccg acccgcgcgg
     1141 aagtcagcga tgtggcaaac gcggtattgg acggcaccga tgcggtgatg tgttccgccg
     1201 aaaccgccgt cggcgcgtat ccgtttgaaa ccgtcagcca aatggcgatt atctgcgcgg
     1261 ctgcggaaaa agagcaggat tcgctcaacg gcgttgccga acaggtcgag tatcccgaag
     1321 cggtcagcac caacctggcg gttgccggcg gtgcggtcag cgtggcgcgc gcggttcacg
     1381 ccaaagccat cgtcgccctg accgaaagcg gttcgaccgc ctttgaaatc agccgccaca
     1441 acatcaccct gccgattttc gcgctgaccc cgagcgtttc cgcccaacgc cgtatggcga
     1501 tgtaccgggg cgtgcgcccg ctgattttgg caaccagcac cgaccacgac acggcgttaa
     1561 acgaagtcga aaccatgctg gtggaacaca acatcctgca ttccggcgac caatacatca
     1621 ttaccagcgg ctcgcaaatg cgcgaatccg gttcgaccaa tacgctggaa gtgctgcgcg
     1681 tcaaataatc cgccctgagt ggaaaatgcc gtctgaagtc gatgcccgag gcttcagacg
     1741 gcattgtttt aggcgcgatt tatagtggat taacaaaaat cag
//
LOCUS       DAWEYF010000220         1755 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.220, whole genome shotgun sequence.
ACCESSION   DAWEYF010000220 DAWEYF010000000
VERSION     DAWEYF010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.220"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(113..769)
                     /locus_tag="WGN93_001942"
     CDS             complement(113..769)
                     /locus_tag="WGN93_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ0227795.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALVAAAILLLS
                     "
     gene            834..1724
                     /locus_tag="WGN93_001943"
     CDS             834..1724
                     /locus_tag="WGN93_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ0227796.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQETLPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMAGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIRAIFGATVVLKGHKTLVASPDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
BASE COUNT          396 a          419 c          580 g          360 t
ORIGIN      
        1 gtttgggacg gaaaaacggc ctgaagccgt ttcgggcatt cagaccgttt gcgcggagag
       61 gggatgccgt ccgaagggcg aaaagggctt cagacggcat tgatgtcggg tttcaggaca
      121 ggagcaggat ggcggctgcg acaagcgcgg caaccgataa tgcggcggca agcgcggttt
      181 tgccggcaaa gcggattgag gttttgcctt cgatgtattt gaagccggtt atcatcggga
      241 ggacgaggtt tttctttttg aacacgcggt atgcggcgac ggcggcgata tgaatggcgg
      301 aaaaaacggc gagcagcttg aaaaagttga ggtggatttt ccgcataagg ctgcccgtat
      361 gctcggaaac caaatggttg aggtagccgt tggtgctgaa ggtgttttca tcggcggcaa
      421 aaagccctgt gccgacttga aatgagacgg cggccaaaag cgcgacgacc atcagtgcgc
      481 ccaaggggtt gtgtccgggt tggacgtgtt cgggaatacc gtttttcata tactctctga
      541 tacccgacca tccgcggacg aaacgggaga aacgggcggt atcgctgccc caaatgcccc
      601 agcagaggcg gaatacgagc aggaaaagga taaacagccc gacgcgcgtg tgccattgca
      661 gcatatcgcc gccggttttc gcgctatacc acataaaggg tagggatgcg gcaagcagcc
      721 agtggaaaag gcgggtgggg aagtcccaga ctttggtttt gtttttcata atcggtttcc
      781 ggcggtagaa tcggtttgtt ttcgagcctt aattttaacc gattggaggg gaaatgtttc
      841 ccgttttcca tctttcaggc gaaagccgcc gccggatgct tcaggcggca tcgcgttttc
      901 cctatgtttt caaagcccgt gcggaagatt cgcacaaagg gactttcggc acgctcgccg
      961 tagtcggcgg atcggcaggg atgagcggcg cgcccgtatt ggcggcatcg gcggcgatgt
     1021 atctcggctg cggcaaggtg tgggcgggtt tcaatcagga aacgctgccg tttgccgtca
     1081 ttgccggttt tcccgaaatt atgttggaca cggcagacgg tttgaccaag cgtcaaggca
     1141 taaacgcttg gatggcaggt tgcggcctgg gtacggataa agcggcggtc ggaacgcttg
     1201 ccggaatttt ggcggaacac acggacaagc ccgtcctttt ggatgcggac gcgctgaaca
     1261 tattatcaac cgatgccgaa acccgaaatc tggcgcgcgg gtgtaaaaac ctgattttaa
     1321 cgccacaccc cgccgaagcc gcgcgcctgc ttggaacgac ggttgcacag gttcaggcgg
     1381 atcggacggc ggcagtgagg aagataaggg caattttcgg cgcaaccgtg gttttaaagg
     1441 ggcacaaaac attggttgcc tcacccgata cggaaatcta tgtcaacgaa agcggcaacg
     1501 cgggattggc aacggcgggc agtggcgacg tattgggcgg catcatcggc agtctgctcg
     1561 cacagggcgt gccggttttt gaagccgcct gcgcgggcgc gtggctgcac ggcgcggcgg
     1621 cggatgtcat aaaagaatcg gcaggcattg cggcagggct gttggctggc gaaatcgccc
     1681 cggcggcaag gtggctgcgc aaccggataa ctgaaagtat gtaagaagat atagtggatt
     1741 aacaaaaacc agtac
//
LOCUS       DAWEYF010000221         1733 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.221, whole genome shotgun sequence.
ACCESSION   DAWEYF010000221 DAWEYF010000000
VERSION     DAWEYF010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.221"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            357..1661
                     /locus_tag="WGN93_001944"
     CDS             357..1661
                     /locus_tag="WGN93_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ0227797.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDATAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          355 a          433 c          510 g          435 t
ORIGIN      
        1 caattaaaaa tttttaatat attaatcaat aaattaattt tataaaataa aaatattgtc
       61 aacaatattt tgccttatcg cccaaacctc tgtatatttt cctacagtaa attgttgaca
      121 atccatacgc ccacatatgc gccgcctaag gataaatcct cccgccggac aacgggtgca
      181 agggattgga tgcgatattt ccatattcaa acaagggatt tgtttcacgc acagggcggc
      241 acatcggcaa aatccccgcg ccgccccggt ccagcagggc ttgcgtccct cccggacaag
      301 ccccgacccc gcctttccga aagacgggct caaccattaa ggaaacttta atcaaaatga
      361 aaaaacacat atgggcggca tctttgctgc cggcatccct atcggcagaa cctttaaact
      421 ggtggaagcc ttattccgcc gtcaattcgg gcgataccgc ctgggtgatg actgcggctg
      481 ccttggtact gttgatgacg cttcccgggc tggctttatt ctacggcggt atggtgcgga
      541 aaaaaaacct gctctcgacg atgatgcaca gcttttccat cgcgacattg gtgggcatcc
      601 tttgggtcgc cgtcggctat tctttagcgt tcacgccggg aaatgccttt atcggcggtt
      661 tggggcgtgt atttttaagc gggatgcaga tagacgctac cgcacagatg ctgaccgtgt
      721 cgcccaatgc gccgactgtt cccgaaccgg tatttatgtt ttttcagatg acgtttgcca
      781 ttatttcgac cgccattatt accggcgcgt ttgccgaacg gatgaaatat tcggcaatga
      841 tgctgttttc gggcatatgg tttttattgg tttatgtgcc gggcgcgcat tgggtgtggg
      901 gcggcggctt tatgagcaag ggcggcgtat tggattatgc cggcggtacg gtggtgcaca
      961 tcaatgccgg tatcgcggga ctcgtcgccg ccttggtttt gggcaggcgc ataggctacg
     1021 ggcgcgaggc gatgcctccg cacaatatgg cgatgacact gatcggcgcg gcaatgttgt
     1081 ggttcggctg gttcggcttt aacgccggat cggcgcttgc ggcagacgcg gcggcgggta
     1141 tggcgatggc ggtaacgcag gtgtcggccg tattcggcgc ggcaggctgg cttgcctgcg
     1201 aaaaaatagc gggacacaaa ccttccgctt tggggctggc ttccggcgcg gtttccggtc
     1261 tggtcggcat cacccctgcc gccggcttta ccggcccgtc gggcgcggcc gccatcggta
     1321 tattgactgc cgccgcgtgc tttgtgtccg tcaccgtcgt caaacacaaa ttgcgttacg
     1381 atgattcttt ggacgctttc ggcatacacg gattcggcgg gctggtgggc ggaatattga
     1441 ccggcatctt tttcgacaac cgcattttcg gcggggatgc ggcagtttgg cagcagttgt
     1501 ggatacaggt aaaagacggg ttcgttatgg cggcatacag cgggctgatg agttgggcga
     1561 ttttgaaggt cgtggggaaa atctgcggcg gcctgcgcgt cggcaaggat gtcgaacgcg
     1621 aaggtttgga tctgaatatc cacggcgaac gcgtggaata agggcggtta tgccgtctga
     1681 agcctgaaaa tcgggtttca gacggcattt ttcacgtttg ccgccgatgg ata
//
LOCUS       DAWEYF010000222         1708 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.222, whole genome shotgun sequence.
ACCESSION   DAWEYF010000222 DAWEYF010000000
VERSION     DAWEYF010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.222"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(37..699)
                     /locus_tag="WGN93_001945"
     CDS             complement(37..699)
                     /locus_tag="WGN93_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ0227798.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPPKSMDEIRNQ
                     ASHGAAGLLKLGAGITPEHPDYARWRTEYLDEYDSRYAQDTTLFGGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLAPKLGFIIPPAVVVSGDTCGEPKPSVKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTDSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(712..1539)
                     /locus_tag="WGN93_001946"
     CDS             complement(712..1539)
                     /locus_tag="WGN93_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ0227799.1"
                     /translation="MKPDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNAPP
                     LDFPHAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVEQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT          334 a          453 c          516 g          405 t
ORIGIN      
        1 atttaatcca ctatatgttt gtggggcgga tatttttcag ggctgtattt tgtccagaca
       61 ttcgagcaga tcgagcggcg tgcggatgtg gaaatccgcc tgccatgagt cggtatcgtc
      121 ttcatctgag atgtagcccc attcggcgag gacggttttc atgccggcgt tgcggcctgc
      181 ttggatgtcg cgttcggcat caccgacgta gagtgtgtgt tgcgggtcgg cgtggatttg
      241 tccgcacgca tacagcatgg gtttgacgct gggcttgggt tcgccgcagg tgtcgccgct
      301 gacgacgacg gcgggtggga tgatgaagcc gagtttgggg gcgagtttgt cggtgaagcg
      361 cataggtttg ttggtgatga tgccccattt gatgccgcgt ctgtcgagtt cggcgatgag
      421 ttcgtttacg ccgccgaaga gggtggtgtc ttgggcgtag cggctgtcgt attcgtcaag
      481 gtattcggtg cgccatcggg catagtcggg gtgttcgggg gtgatgcctg cgccgagttt
      541 gagcagtcct gccgcgccgt ggctggcttg gttgcggatt tcgtccatgc ttttgggcgg
      601 cagtccgtgg cgggcgagca gggtattgag tgcgccgccg aggtctaggg cggtgtcggc
      661 aagcgtgccg tcgaggtcga agagtacggc gtgtatcatg tgtgttcctt ttcagacggt
      721 atttttgttc tgtttcaaac cctgttcgaa atcttccaac atatccaatt cgaagcggct
      781 gaagcccgct ttttcccgcg cttcgatgtt cacatagccg cggaagataa acatatcgta
      841 acgggcaatc agactgcgga acagggcgac aggttccaaa ccgcgttcgc ggcagaggtg
      901 ttgataccaa tggttgccga tggcgacatg acccacttcg tcgcggtaaa tgatgtccaa
      961 tacgccgcag gtttccgaat cgccgcgctg ctccaccttc gcgcgtatcc ccggcgtaac
     1021 gtccagcccg cgcgcttcca acacgcgcgg taccaacgcc atacgcaaca gcgggtcgta
     1081 ggcggttttg tacgccatat cccacaaatg gttgtgcgcc tcgaaactgc cgtaatcgaa
     1141 gccgaaagcg cgcaatctgt cgcgcatcag gcggaaatgg tacacctctt ccttcgccac
     1201 tttcacccag tcgcggacaa actgaaacgg cagcgtgcgg aaacggtatg ccgcgtccaa
     1261 agccagattg acggcgttga actcgatatg cgcaatcgcg tgcagcatcg ccgcatagcc
     1321 ttctgccgtg ttcattttgc gcggggtcag ttgcgacggc gcgaccaaaa ccggcttgtc
     1381 cggccgtccc gcgtggggga aatccagcgg cggcgcgttt gtttcagccc cgtccatgtt
     1441 ctgaacggcg gcaaacgcct catccgtcag ccgtcctttt tcatctgggt cgcccgaaag
     1501 cagggcgcgt tccagcaaag cataaatatc gggtttcatc tcaagtccgc cgtgttcgga
     1561 aaacaaatat tatagcgttt aaaaaaaaca agatgaggca tataatctcc gcgattcggc
     1621 attccgcgcc caaaccgtca aatatagtgg attaacaaaa accagtacgg cgttgcctcg
     1681 ccttagctca aagagaacga ttctctaa
//
LOCUS       DAWEYF010000223         1649 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.223, whole genome shotgun sequence.
ACCESSION   DAWEYF010000223 DAWEYF010000000
VERSION     DAWEYF010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.223"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            295..1455
                     /locus_tag="WGN93_001947"
     CDS             295..1455
                     /locus_tag="WGN93_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ0227800.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     QNIQQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGATRW
                     GNRESFVGLAGEFGTLRVGRVANQFDDASKAIDPWDSNNVVASQLGIFKRHDDMPVSV
                     RYDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQQTPQIQPTLVPAVVGKPGSDVYYAG
                     LNYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTGGYE
                     EGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGKKG
                     ENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          408 a          392 c          424 g          425 t
ORIGIN      
        1 gtgccgtgtg tgttttttat ggcgttttaa aaagccggga ctgcatccgg gcagcagcgc
       61 atcggcccgc acgaggtctg cgcttgaatt gtgttgtaga aacacaacgt tttttgaaaa
      121 ataagctatt gttttatatc aaaatataat catttttaaa ataaaggttg cggcatttat
      181 cagatatttg ttctgaaaaa tggttttttg cggggggggg ggtataattg atgacatatc
      241 gggtgtttgc ccgatgtttt taggttttta tcaaatttac aaaaggaagc cgatatgcga
      301 aaaaaactta ccgcgctcgt attgtccgca ctgccgcttg cggccgttgc cgatgttagc
      361 ctgtacggcg aaatcaaagc cggcgtggaa ggcaggaaca tccagctgca gttgaccgaa
      421 ccgctccaaa atattcaaca acctcaggtt actaagcgca aaagccgcat caggacgaaa
      481 atcagcgatt tcggctcgtt tatcggcttt aaggggagcg aggatttggg cgaagggctg
      541 aaggctgttt ggcagcttga gcaagacgta tccgttgccg gcggcggcgc gacccgttgg
      601 ggcaacaggg aatcctttgt cggcttggca ggtgaattcg gcacgctgcg cgtcggccgc
      661 gttgcgaatc agtttgacga tgccagcaaa gccattgatc cttgggacag caataatgtt
      721 gtggcttcgc aattgggtat tttcaaacgc cacgacgata tgccggtttc cgtacgctac
      781 gattcccccg aattttccgg tttcagcggc agcgtccaat tcgttccggc tcaaaacagc
      841 aagtccgcct atacgccggc tcattttgtt cagcagactc ctcaaattca gcctactctc
      901 gttccggctg ttgtcggcaa gccggggtcg gatgtgtatt atgccggtct gaattacaaa
      961 aatggcggtt ttgccgggaa ctatgccttt aaatacgcga aacacgccaa tgtgggccgt
     1021 gatgcttttg agttgttctt gctcggcagc gggagtgatg aagccaaagg taccgatccc
     1081 ttgaaaaacc atcaggtaca ccgcctgacg ggcggctatg aggaaggcgg cttgaatctc
     1141 gccttggcgg ctcagttgga tttgtctgaa aatgccgaca aaaccaaaaa cagtacgacc
     1201 gaaattgccg cgactgcttc ctaccgcttc ggtaatgcag ttccacgcat cagctatgcc
     1261 catggtttcg actttatcga acgcggtaaa aaaggcgaaa ataccagcta cgatcaaatc
     1321 atcgccggcg ttgattatga tttttccaaa cgcacttccg ccatcgtgtc tggcgcttgg
     1381 ctgaaacgca ataccggcat cggcaactac actcaaatta atgccgcctc cgtcggtttg
     1441 cgccacaaat tctaaatatc ggggcggtga agcggatagc tttgtttttg acggctcgcc
     1501 ttcattcttt gattgcaatc tgactgccaa tctgcttcag ccccaaacaa aaatccggat
     1561 acggaagaaa aacggcaata aagacagcaa ataccgtctg aaagattttc agacggtatt
     1621 tcgcattttc ggcttggttt gcacatata
//
LOCUS       DAWEYF010000224         1644 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.224, whole genome shotgun sequence.
ACCESSION   DAWEYF010000224 DAWEYF010000000
VERSION     DAWEYF010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.224"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(282..1274)
                     /gene="porB"
                     /locus_tag="WGN93_001948"
     CDS             complement(282..1274)
                     /gene="porB"
                     /locus_tag="WGN93_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HEZ0227801.1"
                     /translation="MKKSLIALTLAALPIAAMADVTLYGTIKTGVETSRSVYYEDGKA
                     AEVTTGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFVQYGGAYKRHEQIDNVKIEKYQIHRLVSG
                     YDNDALHASVAVQQQDAKLVEDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFD
                     DADRYNTYDQVVVGAEYDFSKRTSALVSAGWLQEGEGESKFVSTAGGVGLRHKF"
BASE COUNT          447 a          365 c          406 g          426 t
ORIGIN      
        1 agtttcaaaa tttattctaa atagctgaaa ctcaacgcac tagattcccg cctgcgcggg
       61 aatgacggca tattttgaca ttgaataaaa aagactaaaa acaggaaaaa gccaaacaga
      121 aaacagcgaa acagaaaaaa gccaaacaga aaaaagccaa acagaaaaaa gccaaacaga
      181 aaacagccaa acagaaaaca gccaaacaga aaacaggaaa aagccaaaca gaaaaaagcc
      241 tgtctggcga caggcttttt gttgatacca atctttgcag attagaattt gtggcgcaga
      301 ccgacaccgc cggcagtcga tacgaatttg ctttcgcctt cgccttcttg caaccaaccg
      361 gcagaaacca aggcagaagt gcgtttggag aagtcgtatt ccgcaccgac aaccacttgg
      421 tcgtaagtat tgtagcggtc tgcatcatca aacgagcctt tgaagccgtg ggcgtaagaa
      481 acgcggggcg ttacgttgcc gaagcggtat gccaaggtag cggcaacttc ggtttgagag
      541 ttgtgcgaat aattgtcttc aaccaatttg gcatcttgtt gttgtacggc tacggaagcg
      601 tgcagggcat cattgtcgta accgctgacc aaacggtgaa tctggtattt ctcaatcttc
      661 acgttatcta tctgctcatg tcttttatag gcaccgccat attgcacgaa gaagccgccg
      721 tttttgtagt tgaagccggc gtggtaagat tcgctgttat gtctgcctgc attgtcgtta
      781 agcgcgtatt gtacgctgcc gctgaggccg gcaaattcgg gagaatcgta gcgtacggaa
      841 atgaggcgtg cctcgggttc ggcaattttg tttacaccca aatagtcgct tttgctatcc
      901 caaggattga tgtcgccggt atctttcagg acgctgttca gacggccgac gcgcaattta
      961 ccgaagccgc ctttcaaacc gatgaaggat tggcggttgc cccaaccgga gtcagtaccg
     1021 gcgatagatg ccttttgctc aacctgccaa atggctttca gaccgttacc gaggtcttct
     1081 tggcctttga agccgatttt cgaacccaaa tcaacgatgc cggtaccggt tgtaacttca
     1141 gcagctttgc cgtcttcgta atatacagag cgggaagttt ctacgccggt tttgatggtg
     1201 ccgtacaggg taacgtcagc cattgctgca ataggaaggg ctgccaaagt cagggcaatc
     1261 agggattttt tcattgctgt attccttttt tggttaagaa atttaagcag gccgggcttt
     1321 ccaagccgct tagctttgca tttaccgccg acgttttcgg cgattccatg tctgaaacta
     1381 tagatgttcc tgtctgaaaa aacaaacttc tgcctgtttt tgtgtggaat tcgatgtgta
     1441 ttttgaaggg cggatagaga tattgtgggt attttttgtt ttataacata tggttattta
     1501 aattttttaa gatttgcatt tttacaacac ttactcggga gggtattgga gggcattgca
     1561 aaccgagggt tataaagacg gcaaaaaacg cgcacgtggt ttctttcgga acgggcggat
     1621 gcaaaacccg cccctgcggc agga
//
LOCUS       DAWEYF010000225         1624 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.225, whole genome shotgun sequence.
ACCESSION   DAWEYF010000225 DAWEYF010000000
VERSION     DAWEYF010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.225"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(247..>1624)
                     /gene="autA"
                     /locus_tag="WGN93_001949"
     CDS             complement(247..>1624)
                     /gene="autA"
                     /locus_tag="WGN93_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autoaggregation autotransporter AutA"
                     /protein_id="HEZ0227802.1"
                     /translation="HVKIENKSHVAGQVLELTKMTLKDSLWEPRRHSDIHMLETSDNA
                     RIRLNTKDEKLTVHKAYQGGADFLFGYDVRESDKPALTFEEKVSGQSGVVLERRPENL
                     KTLDGRKLIAAEKADSNSFAFKQNYRQGLYELLLKQCEGGFCLGVQRLAIPEAEAVLY
                     AQQAYAANTLFGLRAADRGDDVYAADPSRQKLWLRFIGGRSHQNIRGGAAADGRRKGV
                     QIGGEVFVRQNEGSRLAIGVMGGRAGQHASVNGKGGAAGSYLHGYGGGVYAAWHQLRD
                     KQTGAYLDGWLQYQRFKHRINDENRAERYKTKGWTASVEGGYNALVAEGVVGKGNNVR
                     FYLQPQAQFTYLGVNGGFTDSEGTAVGLLGSGQWQSRAGIRAKTRFALRNGVNLQPFA
                     AFNVLHRSKSFGVEMDGEKQTLAGRTALEGRFGIEAGWKGHMSARIGYGKRTDGDKEA
                     ALSLKWLF"
BASE COUNT          320 a          503 c          413 g          388 t
ORIGIN      
        1 accattatca atcggcggat tgtatcagtt ttttatgccg ctgttccaaa ccctgccgcc
       61 cgatgccgcg acaatgccgt ctgaagccag aatcgggttt caaacggcgg caaaaaaccg
      121 gcggttttcc gccggtttca tcatgatgcc ccgcccttcg gggcggcagg gttcggattg
      181 gtttgcgggg cggcgcgcgg ggccgtgccg gtgtgccgcc tgtgcgtcaa aacatttccc
      241 gacgcatcaa aacagccatt tgagcgacaa tgcggcttct ttgtcgccgt ccgtcctttt
      301 gccgtatccg atgcgtgcgg acatatggcc tttccaaccg gcttcaatgc cgaaccgccc
      361 ttcgagcgcc gtcctgcctg ccagcgtctg tttttcgccg tccatttcca cgccgaaaga
      421 ttttgacctg tgcaaaacat taaaagcggc aaaaggctga agattgacac cattacgcaa
      481 agcaaaacgg gtttttgccc gaatgccggc gcggctttgc cactgaccgc tgccgagcag
      541 tccgaccgcc gtcccctcgc tgtcggtaaa gccgccgttt acgcccaagt aggtaaactg
      601 agcctgcggt tgcaggtaaa accgcacatt attgcctttt ccgacaacgc cttccgccac
      661 aagcgcgttg tagccgcctt cgacagaagc cgtccaacct ttggttttgt agcgttccgc
      721 acggttttca tcattgatgc gatgtttgaa acgttggtat tgcaaccagc cgtccaaata
      781 cgcacccgtt tgtttatcgc gcaactgatg ccacgcagca taaacacccc cgccataacc
      841 atgcaaataa ctgcctgccg caccgccttt gccgttgact gatgcgtgct ggccggccct
      901 gccgcccatc acgccgattg ccagtcggct gccttcattt tgccgtacaa acacctcgcc
      961 gccgatttgc acgcctttgc gccgcccgtc cgcagccgcg ccgccccgta tattttgatg
     1021 cgaccgaccg ccgatgaagc gcagccacaa tttttgacgg gacggatcgg cggcatacac
     1081 gtcgtcgccc ctgtcggcgg cacgcagccc aaacaaagta tttgccgcat aagcctgttg
     1141 ggcatataaa accgcttccg cctcggggat agccaaacgc tgcacgccca agcaaaatcc
     1201 gccttcgcat tgcttgagca ataattcgta cagtccctgc cggtaatttt gtttaaacgc
     1261 aaacgaatta gagtctgcct tttccgccgc aatcagtttg cgcccgtcga gcgttttcag
     1321 attttccggc cggcgttcca aaaccacgcc ggattgtccg ctgacttttt cttcaaaggt
     1381 cagggcgggt ttgtccgact cccgcacgtc gtagccgaac aggaaatccg caccgccctg
     1441 atacgcttta tggacggtca gtttttcatc tttcgtgttc aggcggatgc gggcattatc
     1501 ggaagtttcc agcatatgga tgtcggaatg gcggcgcggt tcccaaaggg aatctttcag
     1561 cgtcatcttg gtcagttcca acacctgtcc ggcgacgtgg gatttgtttt cgattttgac
     1621 gtgt
//
LOCUS       DAWEYF010000226         1591 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.226, whole genome shotgun sequence.
ACCESSION   DAWEYF010000226 DAWEYF010000000
VERSION     DAWEYF010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.226"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            59..1432
                     /locus_tag="WGN93_001950"
     CDS             59..1432
                     /locus_tag="WGN93_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ0227803.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKPEMREPRQRNRYESAKAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          414 a          522 c          384 g          271 t
ORIGIN      
        1 cccatcctat cggtttcccg cttcagacgg cataaggtct gaaagaaaga ctacaattat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttacta gccgccgcgc aaaccggcac gggcaaaacc gccgccttta tgctgccctc
      241 gctcgaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtg ttgaccccca cgcgcgaact cgccgaccaa atcgaccaaa acgtgcagtc
      361 ctacatcaaa aacctgccgc tgcgccacac cgtcttgttc ggcggtatga atatggacaa
      421 acagaccgcc gatttgcgtg ccggctgcga aatcgtcgtc gccacagtcg gacggctgct
      481 cgaccacgtc aaacaaaaaa acatcagttt gaacaaagta gaaattgtcg ttttggatga
      541 agccgaccgt atgctggata tgggttttat cgacgacatc cgcaaaatca tgcagatgct
      601 gccccgccaa cgccaaaccc tgctcttttc cgccaccttc tccgccccga tacgcaaact
      661 ggcgcaagac ttcatgaacg cgcccgaaac cgtcgaagtc gccgcgcaaa acaccaccaa
      721 cgccaacgtc gaacaacaca tcatcgccgt cgataccttc caaaagcgca acctgctcga
      781 acggctgatt gtcgatctgc atatgaacca ggtcatcgtg ttctgcaaaa ccaaacaaag
      841 cgtcgaccgc gtaacgcgcg aactggtgcg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttcc caacaaagcc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcgcg cgggctggac attgccgaac tgcccttcgt
     1021 catcaattac gaaatgcccg cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgcgggc gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 tgaatccatt aaagagctga ccggcaacaa gctgctcatt gagcgcatcg agggcttcga
     1201 gccgcaatgg tgggaacagg gcggcgcaaa accggaaaaa cccgaaatgc gcgaaccgag
     1261 acaacgcaac cgctacgaat ccgccaaagc gcaacgcgaa aaaaacaccc ggccggaaac
     1321 cacggcaaac gatgcgggcg cggcttgcgg aaaaattgcc ggacgcagcc gccgaagccg
     1381 ccgggaacac cggacctgcg ccctgctcca accgcgttac ggcgtaaaat agccctgaaa
     1441 atcaaatgcc gtctgaacat ttccgtttca gacggcattt ttcaaaccgg actgacgcat
     1501 tgggcgcaac cgcccgcacc ggataaattt ctgccgcaaa cagtttcaga cggcatttgc
     1561 tgcctgtaca atatagtgga ttaacaaaaa t
//
LOCUS       DAWEYF010000227         1542 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.227, whole genome shotgun sequence.
ACCESSION   DAWEYF010000227 DAWEYF010000000
VERSION     DAWEYF010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.227"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            96..404
                     /locus_tag="WGN93_001951"
     CDS             96..404
                     /locus_tag="WGN93_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227804.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFTF
                     DVVQAQALAQAIMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            486..1517
                     /gene="ruvB"
                     /locus_tag="WGN93_001952"
     CDS             486..1517
                     /gene="ruvB"
                     /locus_tag="WGN93_001952"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ0227805.1"
                     /translation="MLQTDNLTAAQPQRIITAQSISSQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRK
                     FLEAILHKFSGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
BASE COUNT          385 a          518 c          354 g          285 t
ORIGIN      
        1 agttttgagg aggataccca atccaagctt tgcaacagcc gccgccatat ccgctataat
       61 tcacgcttca gccatcctgc ccccgacata aaatcatgac cctgaaaacc gatttattgc
      121 ctaaaatcaa caacgaagat tatcaacgcc tcatcctcaa acacagtgcg gaatttagcg
      181 gtggcgaaat ccgcctgttg aacgaaatcc ttgaaaaatt caccttcgac gtcgttcaag
      241 cgcaggcatt ggcgcaggcg ataatgcagc aagtccgctt cgaccccaac gcctatcaca
      301 tcgacagcga tgacgaagac accacaggca tctgcccaca ctgcatcaat ccgcccatgc
      361 cgcccctgcg cgattacctc gtttggcgcg aaacgcgcgg ataaaacgct tttgaccgtt
      421 atcttttcaa tgccgtctga aacgccgccg accgttcaga cggcataccc gacaaaggga
      481 acactatgct gcaaaccgac aacctaaccg ctgcccagcc ccagcgcatc atcactgccc
      541 aaagcatctc ctcacaagaa gagttgctcg aacgtgccct gcgtcctaaa acgctggacg
      601 actatatcgg gcaagacaaa gccaaagaac agcttgccat tttcatccaa gccgccaaaa
      661 aacgcggcga agcactcgac cacgttttgc tcttcggccc gcccggactg ggcaaaacca
      721 cactggcgca catcatcgcc aaagagctgg gcgtcaacct gcgccaaacc agcggccccg
      781 tcctcgaacg cgccggcgac cttgccgccc ttctgaccaa ccttgatccg cacgatgtat
      841 tgttcatcga cgaaatccac cgcctcagcc ctgttgtcga agaaatcctc tatcccgcgc
      901 tcgaagacta ccggctcgac attatgatag gcgaaggacc cgccgcccgt tccgtcaaaa
      961 tcgacctgcc gcccttcacc ctcgtcggcg cgaccacccg cgccggtatg ctgaccaatc
     1021 cgttgcgcga ccgcttcggc atcgtctccc gccttgagtt ttacgaaaac cgagacctta
     1081 ccaccatcgt cagccgttcg gcacaactgt tgcagctcga tatgtccgaa gaaggcgcgg
     1141 aagaaatcgc caaacgcagc cgcggtacgc cgcgcatcgc caaccgcctg ttgcgacgcg
     1201 tgcgcgattt cgccgacgtg aaaaacaacg gcgtaatcga tgccgccgtc gccgatgccg
     1261 ctttaagcat gctggatgtg gacgcgcaag gtttggatgt tatggacaga aaattcctcg
     1321 aagccatcct gcataaattc agcggcggcc ccgtcggttt ggacaacgtt gccgccgcca
     1381 tcggcgaatc tacagacacc atcgaagacg ttatcgaacc ctatctcatc caacaaggct
     1441 tcctgcaacg caccccgcgc ggcaggatgg cgaccgaacg cgcctacctg catttcgggc
     1501 tgcccgtcga aaaataacgc aatgccgtct gaaacagagc ta
//
LOCUS       DAWEYF010000228         1541 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.228, whole genome shotgun sequence.
ACCESSION   DAWEYF010000228 DAWEYF010000000
VERSION     DAWEYF010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.228"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            199..1413
                     /locus_tag="WGN93_001953"
     CDS             199..1413
                     /locus_tag="WGN93_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ0227806.1"
                     /translation="MAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINLVPFILTAPTP
                     YQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFTGHLSYYDRGRMAN
                     IFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHLNEPKSQKILF
                     IVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEMRELCAYGGLR
                     GFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAGFQEIKTAENL
                     IGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESDIFNHRLKCTE
                     YGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGVEVIIVGDHPPPVGNLNETFRYLK
                     QGHVAWLHFKIK"
BASE COUNT          334 a          484 c          370 g          353 t
ORIGIN      
        1 attcacgccc tgctctccaa acaatggacg ctgccgccat tcctgccgaa acggctgctg
       61 ctgtccctgc tgatactgct ggcccccaat gcgatgtttt gggttttggc actgctgacc
      121 gccaccgccc gcccgattgt caatttggac taccttcccg ccgcgctgct gatcgccctg
      181 ccttggcgtt tcgtcaaaat tgccggcgta ttggcgtttt ggctggcggt tttgtttgac
      241 gggctgatga tggtgatcca gcttttccct tttatggacc tcatcggcgc catcaacctc
      301 gtccccttca tcctgaccgc ccccacccct tatcagataa tgaccgggct gttgctgctg
      361 tatatgctgg cgatgccgtt tgtgttgcag aaagccgccg ccaaaaccga cttccggcac
      421 attgccgtct gcgccgccgt tgtggcggca gccggctatt tcaccggcca tttgagttac
      481 tacgaccggg ggcggatggc caatatcttc ggcgcaaaca acttctatta cgccaaaagt
      541 caggcgatgc tctacaccgt tagccagaat gccgacttta ttaccgccgg cctggtcgat
      601 cccgtcttcc tccccttggg caatcagcag cgtgccgcca cgcatctgaa cgagccgaaa
      661 tctcaaaaaa tcctctttat cgtcgccgaa tcttgggggc tgccggccaa tcccgaactt
      721 caaaacgcca cttttgccaa actgctggcg caaaaagacc gtttttcggt ttgggaaagc
      781 ggcagttttc cctttatcgg cgcgacggtc gaaggcgaaa tgcgcgaact gtgtgcctac
      841 ggcggtttgc gcgggtttgc actgcgccgc gcgcccgacg aaaaatttgc ccgctgcctc
      901 cccaaccgtt tgaaacaaga aggttacgcc acctttgcga tgcacggcgc gggcagttcg
      961 ctttacgacc gcttcagctg gtatccgagg gcgggctttc aagaaatcaa aaccgccgaa
     1021 aacctgatcg gtaaaaaaac ctgtgccatt ttcggcggcg tgtgcgacag cgagctgttc
     1081 ggcgaagtgt cggcattttt caaaaaacac gacaagggac tgttttactg gatgacgctg
     1141 accagccacg ccgactatcc cgaatccgac attttcaacc acaggctcaa atgcaccgaa
     1201 tacggcctgc ccgccgaaac cgacctctgc cgcaatttca gcctgcacac ccaattcttc
     1261 gaccaactgg cggatttaat ccaacgcccc gaaatgaaag gcgtggaagt catcatcgtc
     1321 ggcgaccatc cgccgcccgt cggtaacctc aatgaaacct tccgctacct caaacagggg
     1381 cacgtcgcct ggctgcactt caaaatcaaa taacaacaat gccgtctgaa cgcaccaaca
     1441 gccttcagac ggcattttgc agacagaccg acccttcaag cccacttttt tcatcatctc
     1501 cgataaattg ctttgtatag tggattaaca aaaaccagta c
//
LOCUS       DAWEYF010000229         1479 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.229, whole genome shotgun sequence.
ACCESSION   DAWEYF010000229 DAWEYF010000000
VERSION     DAWEYF010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.229"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            41..211
                     /locus_tag="WGN93_001954"
     CDS             41..211
                     /locus_tag="WGN93_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ0227807.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT          459 a          403 c          326 g          291 t
ORIGIN      
        1 ggtttttgtt catccgctat acaaaaacaa ggaaacacaa atggcgcaat atatgtgcgg
       61 cccctgcggc tggatttacg atgaagaaca cggcgaccct gaacacggca tcccccccgg
      121 gacaaagttt gaagacattc ccgacgactg gaaatgcccc gaatgcggcg tgggcaaaga
      181 agatttctac ctgttggatt tcgtgatata gcggcagccg aaccccttcg gaaaattcct
      241 cggcgttccg cctgcggtag cagggaacac cgttttatag tggattaaca aaaatcagga
      301 caaggcgacg aagccgcaga cagtacaaat agtacggaac cgattcactt gttaaagaat
      361 cgttctcttt gagctaaggc gaggcaacgc cgtactggtt tttgttaatc cactatatcc
      421 gtttgcgccc gccaagccgt gttgcacaga tgcgacacgg cttttttctt tctgttgtca
      481 gaatgtaaat tttcgtcaaa aaacatcaaa aatcaccccc cccccgaatt tgcgtaaaat
      541 aaagtgtaat ccctttgatc ataagggaat gttgacaatt agatcgattc tcctaggctg
      601 actttcgcaa taaatggggt tgtcaataat tgtgtatggt cgtttgccgt ccggcggccg
      661 tcattcccgc gcaggcggga atccagaaac gcaacgcagc aggactttat cggaaaaaac
      721 cgaaatccca ccgccgtcat tcccgcgcag gcgggaatcc agcaacacaa cgcagcagga
      781 ctttatcgga aaaaaccgaa accccaccga ccgtcattcc cgcaaaagcg ggaatccagc
      841 aaccgaaaaa ccacaggaat ctatcagcaa aaacagaaac cccaccgccg tcattcccgc
      901 gaaagcggga atccagaccc gtcggcacgg aaacttaccg gataaaacag tttccttaga
      961 ttccacgtcc tagattcccg ccttcgcggg aatgacgaga ttttagatta tgggaattta
     1021 tcaggaatga ttcaatccat agaaaaacca caggaatcta tcagcaaaaa cagaaacccc
     1081 caccgcgtca ttcccgcaaa agcgggaatc cagaaacaca acgcggcagg actttatcgg
     1141 aaaaaacaga aacccccacc accgtcattc ccgcgcaggc gggaatccag acccgtcggc
     1201 acggaaactt accggataaa acagtttcct tagattccac gtcccagatt cccgccttcg
     1261 cgggaatgac gagattttag attatgggaa tttatcagga atgattgaat ccatagaaaa
     1321 atcacaggaa tctatcagaa aaaacagaaa cccccaccgc gtcattcccg caaaagcggg
     1381 aatccaaaaa cgcaacgcaa caggaatcta tcggaaaaaa cagaaacccc accgccgtca
     1441 ttcccgcaaa agcgggaatc cagacccgtc ggcacggaa
//
LOCUS       DAWEYF010000230         1445 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.230, whole genome shotgun sequence.
ACCESSION   DAWEYF010000230 DAWEYF010000000
VERSION     DAWEYF010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.230"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            27..1364
                     /locus_tag="WGN93_001955"
     CDS             27..1364
                     /locus_tag="WGN93_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ0227808.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGQNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGIWGEFKVFGKTIFDLWDYVISAVIMPVGALGVA
                     VFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLDIL"
BASE COUNT          259 a          347 c          391 g          448 t
ORIGIN      
        1 tatcttcaca tttcttaata aattttatga gtaaccatac ttcttggtcg tccaaaatcg
       61 gtttcgtgct tgctgcggca ggttcggcca tcggtttggg cgcgatttgg aaatttcctt
      121 atacggcagg caccaacggc ggcgcggtgt ttttcctgct gtttttgata tttaccgtct
      181 tggtcgccct gcccgtccag cttgccgagt tttatatcgg gcgcacaggc ggtcaaaacg
      241 ccgtcgattc cttcagggct ctgcgtccga gtacgcaatg gctttgggtc gggcgcatgg
      301 gcgtttccgc ctgctttatt ttgctgtcgt tttacagcgt ggtcggcgga tgggtattaa
      361 attatgtcgt ccacagtttc acgggggcgg ttcataccgg cgcggacttt gaagccttgt
      421 tcggcgcgac gatttccaat ccggcaggtt cgctgtccta tcaggcactg tttatgctga
      481 ttacggtctg ggtggtcaaa ggcggcattt cagacggcat tgaaaaggca aaccgttatc
      541 tgatgccggg gctgtttatc ctctttattg cgctggcaat ccgttcgctg acgctgccgg
      601 gtgcaatgga gggcgtgtct ttcctgctca aaccgaattg gtcgtacttt aaagccgata
      661 cgatgattac ggctttaggc caggcgtttt ttgccttgag catcggcgtt tccgctatga
      721 ttacctatgc ttcgtatttg ggaaaagatc aggatatgtt ccgctcgggg catacgatta
      781 tgtggatgaa cctcttggtt tcgctgttgg caggtttggt gatttttccg gcggtgttcg
      841 ccttcggttt tgaaccgagc caggggccgg gattgatttt tatcgtattg ccggcagtgt
      901 ttatgaagat gccgttcggt acggttttgt ttgcggtatt tatgctgctg gtcgttttcg
      961 ccacgctgac ttcggcgttt tcgatgttgg aaacggtcat tgcctcaacc atccgccaag
     1021 acgagcgcaa acgcaaaaaa cacacttggc ttatcggcac ggctattttc attgtcggca
     1081 tcccgtccgc gctgtctttc ggcatctggg gtgagtttaa ggttttcggc aaaaccattt
     1141 ttgatttgtg ggactatgtt atttccgccg tcattatgcc tgtcggcgcg ttgggcgttg
     1201 ccgtatttac cgcctggatt caggacaagc agtctgtgtt aaaagatgcc ggcgcgggca
     1261 gcaccgtacc acgggcagtg ctgctgctgt ggctgaatac cttgcgctac ctcgccccga
     1321 ttgccattat tattgttttc gtcaattctt tggacatcct ttaaaagcca tccaaacagc
     1381 aaaaatgccg tctgaaagcc tttcagacgg catttttgct tcaggttcag cctatttcgt
     1441 tcaaa
//
LOCUS       DAWEYF010000231         1420 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.231, whole genome shotgun sequence.
ACCESSION   DAWEYF010000231 DAWEYF010000000
VERSION     DAWEYF010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.231"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            1..106
                     /locus_tag="WGN93_001956"
                     /pseudo
     CDS             1..106
                     /locus_tag="WGN93_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type cleavage/methylation
                     domain-containing protein"
     gene            302..649
                     /locus_tag="WGN93_001957"
     CDS             302..649
                     /locus_tag="WGN93_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ0227809.1"
                     /translation="MTGFNDAAGVASASDIKGKYVKSVEVKNGVVTATMASSNVNNEI
                     KGKKLSLWAKRQDGSVKWFCGQPVTRKANNADDVAADGNDKIDTKHLPSTCRDESTAG
                     CIETPPTAFYKNT"
     gene            1290..>1420
                     /gene="pilE"
                     /locus_tag="WGN93_001958"
     CDS             1290..>1420
                     /gene="pilE"
                     /locus_tag="WGN93_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial major subunit PilE"
                     /protein_id="HEZ0227810.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEA"
BASE COUNT          452 a          416 c          266 g          286 t
ORIGIN      
        1 gcgcaccgac gccaaagccg acaccgtcgc cgccgccgcc aagaccgccg acaacatcaa
       61 caccaagcac ctgccgtcaa cctgccgcga cgcttcatct gccagccgta caaaaacacc
      121 cggtttcgct ttcaaatact tccaaaaaat cagccgttac cgagtattgc ccgaatcacg
      181 gcaaatgact aaaaaacttc gtcattcccg cgcaggcggg aatctaggtt tgtcggcgca
      241 gaaacttatc gggtaaaaag gtttctccag tcctgaatcc tagattccca ctttcgtggg
      301 aatgacggga tttaatgatg ccgccggcgt ggcatccgcc tccgacatca aaggcaaata
      361 tgttaaaagc gttgaagtca aaaacggcgt cgttaccgcc acaatggctt caagcaacgt
      421 aaacaacgaa atcaaaggca aaaaactctc cctgtgggcc aagcgtcaag acggttcggt
      481 aaaatggttc tgcggacagc cggttacgcg caaagccaac aacgccgacg acgtcgccgc
      541 cgacggcaac gacaaaatcg acaccaagca cctgccgtca acctgccgcg atgaatcaac
      601 tgccggttgc atagaaacac cacctacggc tttctataaa aatacctaaa ccgtcattcc
      661 cacgaaccta catcccgtca ttcccgcgaa agtgggaatc cagaacgtaa aatctaaaga
      721 aaccgttttc ccgataagtt tccgtgccga cgaggctgga ttcccgcctg cgcgggaatg
      781 acgaagccat ccgcacggaa acctgccgcg atgattcaac tgccgtttgc acaggaacac
      841 cacgcgccga tttcaatcac tttccaagaa aacggaaatt tttaaaaatt aaatttaaaa
      901 tttcccaccc aacccaccct atgctaccgc gcaaattcaa aaatctcaaa ttccgaccca
      961 atcaacacac ccgatgcccc atgccaatag aaatacccca cgccaataaa aaagtgccga
     1021 aaatcggcac taaaactgac aattttcaac actgatgaca aaaaacggta accccctgct
     1081 tcctcaaacc acgcccaaac gaaagaaaat gtaaaataaa aacaaccata taaagataaa
     1141 cgcataaatt ttcacctcaa aacacaaact tgataccaat cttgctttat aatacacagg
     1201 tatcgcaaca aaataccgat ggtcaaatac attgcataat gccgatggcg taagcttgaa
     1261 gcatttcctt tccaattagg agtaatttta tgaacaccct tcaaaaaggt tttaccctta
     1321 tcgagctgat gattgtgatt gccatcgtcg gcattttggc ggcagtcgcc cttcctgctt
     1381 atcaagacta cacagcccgc gcacaagttt ccgaagccat
//
LOCUS       DAWEYF010000232         1416 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.232, whole genome shotgun sequence.
ACCESSION   DAWEYF010000232 DAWEYF010000000
VERSION     DAWEYF010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.232"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="WGN93_001959"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="WGN93_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ0227811.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAQPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT          379 a          409 c          308 g          320 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggcccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgattgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtttgg gtatgtggga caaaattccc gaaaacgaaa tctacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 cgaggcgcgc ggcgaacctg ccgactgttt gggctatctt atttccaacc acaatatccg
      541 acgcgctgcc tacgaagtcg tatcccaact cgacaacatt accattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggcggcaagc gtaaaagaac agctcaaggg
      961 caggcttggc gacatggaac tggtcagcag tatccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggta aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc atgcccagcc gctttatcac ggaaccaata tgatgctgaa
     1261 actgtttacc aatgagaccg cgccggcaaa actgctgcgc ggtttggtat tgcgtgccgg
     1321 caacaacttc ccgccgctga aaaaactgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttg
//
LOCUS       DAWEYF010000233         1309 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.233, whole genome shotgun sequence.
ACCESSION   DAWEYF010000233 DAWEYF010000000
VERSION     DAWEYF010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.233"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(99..1022)
                     /locus_tag="WGN93_001960"
     CDS             complement(99..1022)
                     /locus_tag="WGN93_001960"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ0227812.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          350 a          312 c          330 g          317 t
ORIGIN      
        1 gggaatgacg aattttaggt ttctgttttg gttttttgtc cttgtaggaa tgatgaaaat
       61 ttaagtttta ggaatttacc ggaaaaaaat agaaagcgtt atccacaagt tctgatgttc
      121 agctcgtgaa atgcgtcggg caaatcatcg ctgtcggcaa attccacccg gtcgtaagcc
      181 gtttcgtctg ccaaaaccgc gcgcaagagt gcgttgttga tggcgtgtcc cgatttgtag
      241 ccttcaaatg cgccgacaat cggatgtccg acgatataca aatcaccgat ggcatcaagg
      301 attttgtggc gcacaaactc atcgggatag cgcaagcctt caggattcag gacatccgtg
      361 tcgtcaatca cgatggcgtt gttcaaattg ccgcccaaac ccagattgtg ggcgcgcatc
      421 atttccactt cgtgcataaa gccgaaagtg cgcgcgcgcg cgatttcgtc gatgtaggat
      481 ttgccggcga aatcgatttc aaaagtgggc gagctgcggt tgaaaaccgg atggtcgaat
      541 tcgatggtca gcgttacctt aaagccgtca tacggcgtaa agcgcaccca tttgcccgct
      601 tctttgattt cgacaggctt gaggattttc aaaaaacgct tttgcgcctt ttgatcgacc
      661 acgcccgcat cttgcaaaag gtaaataaac ggcaggctgg agccgtccat aatcgggatt
      721 tcgggcgcgt tcagctcaat cagcgcgttg tcgataccgt aggcggacag cgcggacata
      781 atgtgttcga tcgtgccgac gcgcacgcct ttgtcggtaa cgatggtgga ggaaaggcgg
      841 gtatcgttga tcaaataagg ggtcagtttg atttgttcgc ccatctcgcc gtccaaatcg
      901 gtacggcgga aggaaatccc gctgttttca ggcgcggggt gcagggtcag tgcgacccgt
      961 tcgccggaat gcagcccgac tccggtaacg ctgatggatt tcgccaaagt tctttgcagc
     1021 ataaaccgct tccttatcaa tggggtaagt tttggaataa tacgataaaa ccggaaaaac
     1081 aggctatgtt tttccatagt atttgccaat gtatccgttt tcaatacgta agccgcataa
     1141 aaatgtatag tggattaaca aaaatcaaga caaggcgacg aacccgcccc tcccgaaaaa
     1201 cgcaaaaaat gccgtccgaa aacctttcgg acggcatttt cgcgtgaacc gtcattccca
     1261 caaggacaaa aaaccaaaac agaaaaccaa aaacagcaac ctaaaattc
//
LOCUS       DAWEYF010000234         1265 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.234, whole genome shotgun sequence.
ACCESSION   DAWEYF010000234 DAWEYF010000000
VERSION     DAWEYF010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.234"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            37..369
                     /locus_tag="WGN93_001961"
     CDS             37..369
                     /locus_tag="WGN93_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ0227813.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            701..1210
                     /locus_tag="WGN93_001962"
     CDS             701..1210
                     /locus_tag="WGN93_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ0227814.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          337 a          240 c          303 g          385 t
ORIGIN      
        1 tgttttgacg gaaaaccatc atataaagga acacttatgc agattttatc ttttcagccg
       61 gacattgcgg aacgtatgct ggaaggtacg gaaggcgagt cggtcaacga aaacgcacaa
      121 ttcgtccgta cggacaacgg ctattggatt gcgtggcatg aaggcgtagc ggcactgctt
      181 gcgcccgata cgccgccggg cattccctgt ttttgggtgg aaggcgcgga aagccttgaa
      241 gagttgtgcg tcatggtgga acgcggcgag tttgacgaag tggaagagtt tgacggcgat
      301 gacgacgaat ggctcgaaac ggcacagggt tgcgggcacc acggcgacgc ttgcgcctgc
      361 ggacattaaa ggcattgcag gcttgccgca aggggggcaa ggctttgccg ttttttaaat
      421 aatcggtgga ttgcatctgt ttgcaatggg ctgaacgctt ccctttgtat tttattgaat
      481 aaaaaaactt atcttggtat tataattaag gcagcatcaa ttattttggg atggcaataa
      541 acgcaaagca ttgatttgcg ccgattgcag acttattata gcaggttgcg gcgcggactt
      601 aatgggaatt gtttatagag catgatggtc tgaaacatca ttaattaaaa ataccattaa
      661 tccgatttat atttatttca atttcaatgg aaaaacatca atgacaatga ttttaagcat
      721 tttaagcctg ttttttatca tcagactgtt atttttagcc gtctctatta aacatgaaaa
      781 agccttgatt gccaaagggg cgaaacaata cggaaaaacc aattccacgc tgcttgcggc
      841 agttcatacg ctttattatt tggcgtgttt tgtttgggta tggctttctg acactgcttt
      901 taatggcata tccttgattg gtacgctgac ggtgatggct tcgtttgtga tattgtcatt
      961 gattattaag cagttggggg agatttggac ggttaaaatc tatattttac caaatcatca
     1021 aattaatcgt tcgtggttgt ttaaaacatt ccgccacccc aattattttt taaacatcat
     1081 acccgaactg attggcatcg ccttattatg tcaagcgtgg tatgttttat tgattggtct
     1141 gcccatttat ttgctggtct tatttaagcg tatccgacaa gaagaacagg cgatggcaac
     1201 acttttttaa cccgtttcat caattatagc ggattaacaa aaaccagtac ggcgttgcct
     1261 cgcct
//
LOCUS       DAWEYF010000235         1253 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.235, whole genome shotgun sequence.
ACCESSION   DAWEYF010000235 DAWEYF010000000
VERSION     DAWEYF010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.235"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            236..1189
                     /locus_tag="WGN93_001963"
     CDS             236..1189
                     /locus_tag="WGN93_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ0227815.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPASFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSPGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNPESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT          200 a          271 c          432 g          350 t
ORIGIN      
        1 aaaccggatg attcgggcta aataattcct gattctttgg atatagccaa cggtatgcct
       61 gccgatgccg tcagaaaggg cttgatgggc gtttgcggtt cgggttaata tttgtgctgt
      121 atctgttaat tccggttagt aaaatggggc ggggacgatg agtggccgtc ggtcggtttt
      181 gcacgggcgg taataatgtc cggcgcaagg tgcgccgttt cgggaggggt gtgtgatggg
      241 ttttctgatt ggtttgagcc gcaacctgac gcggtttacg gctttggtca ttttgcttgc
      301 gtcggcggtt gcgtttatcg gaccggcttc gtttgcgtgg gttaagggcg atgttcaggt
      361 cttggtgctg ggcatcatta tgctgggtat ggggatgact ttgggcaggg aggactaccg
      421 gattttggcg cagcgtcctt tggatgtgtt tatcggtgcg gcggcgcaat ataccgtgat
      481 gccgttgctc gccatcggta ttgccaagct gttcgacctt tcgccggggc tgactttggg
      541 gctggtgttg gtggggacgt gtccgggcgg cgtgtcgtcc aacattatga gtttccttgc
      601 caaaggcgat gtggcgtttt cagtcggtat gacgacggtg tctacggtgc tggctccggc
      661 cgttacgcct ttgtggatga cctgcctggt cggtcagacg gtggatatgg acggttgggg
      721 gatgttccgg tttatgctgc tggtcacgct tttgccggtg gtgctgggtt cggcggcaaa
      781 tatcctgctg cacggaaaac attggtttga aaatgtccgt gccgttatgc cgggcgtggc
      841 ggtattggca tttgcctgca ttgtcggcgg tgtggcttcg gttcacggac accgttttgc
      901 cgaatcggcg ttggtaatgg tgttggcgat tgcggtacac aatatcgccg gctatgtgtc
      961 aggctattac gccgccgcgc tgtttggtat ggatacggca aaaaaacgca ccttggcaat
     1021 cgaagtcggc gtgcagaatg ccggtttggc aacaggattg agcgcgaaat ttttcccagg
     1081 caaccccgaa tcggcggttg cggcggcggt cgcctgcgtg tggcattcgg tttcggggac
     1141 ggtattgggc aacttgttcg ctctgtggga caagcgtcgg gacgcttagt cgggcgtgtc
     1201 cgaaccgtcc cacgatatat agtggattaa ctttaaaccg gtacggcgtt gcc
//
LOCUS       DAWEYF010000236         1208 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.236, whole genome shotgun sequence.
ACCESSION   DAWEYF010000236 DAWEYF010000000
VERSION     DAWEYF010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.236"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>1208
                     /locus_tag="WGN93_001964"
     CDS             <1..>1208
                     /locus_tag="WGN93_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ0227816.1"
                     /translation="FAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQA
                     NELRTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTDGTTAKMGDLLLAADNLH
                     SRFKDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKEAQLALL
                     DNLIHKWAETDSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQLKKNALVSLSDKAKA
                     AIDAARDRIAVLDAYTGQDSSTLYYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTR
                     LQPYLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEG
                     RRLMADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHNKNVSLY
                     GNDGNDTLIGG"
BASE COUNT          373 a          275 c          272 g          288 t
ORIGIN      
        1 tttgccaaac acggctacgc ggctttggcc gaattggatt caaacggcga caacatcatc
       61 aacgcggcag acgccgcatt ccaaaccctg cgtgtatggc aggatctcaa tcaggacggc
      121 atttcccaag ctaatgaatt gcgtaccctt gaagaattgg gtatccaatc tttggatctc
      181 gcctataaag atgtaaataa aaatctcggt aacggtaaca ctttggctca gcaaggcagc
      241 tataccaaaa cagacggtac aaccgcaaaa atgggggatt tacttttagc agccgacaat
      301 ctgcacagcc gcttcaaaga caaagtggaa ctcactgccg aacaggcaaa agccgccaat
      361 cttgcgggca ttggtcgtct gcgcgatttg cgcgaagctg ccgcattgtc cggcgatttg
      421 gccaatatgc tgaaagctta ttctgccgcc gaaactaaag aagcacagtt ggcattgtta
      481 gataatttga ttcacaaatg ggcggaaacc gattcgaact ggggcaaaaa atcgccaatg
      541 cgactttcaa ccgattggac gcaaacggct aatgaaggta ttgcactgac accatcccaa
      601 gtagcacaac taaaaaagaa cgctttagtt tccctttctg ataaagctaa agcagctatt
      661 gacgccgccc gcgaccgcat tgccgtgctt gatgcctaca cggggcagga ttccagcaca
      721 ctctattaca tgagcgaaga agacgcgctt aatatcgtca aagtaaccaa cgatacatac
      781 gaccatctcg ccaaaaacat ctaccaaaac ctgttattcc aaacccgttt gcagccatat
      841 ttgaatcaaa tcagtttcaa aatggaaaat gatacgttca ctttggattt tagtggtctt
      901 gttcaagcat ttaaccatgt caaagaaact aatccgcaaa aagcttttgt ggatttggcc
      961 gagatgcttg catatggcga acttcgttct tggtatgaag gccgaagact aatggccgat
     1021 tatgtggagg aggcaaaaaa agcaggtaaa tttgaagatt accagaaagt gttgggtcag
     1081 gagaccgttg cattattagc taaaacatcg ggtacgcaag cagatgatat cctgcaaaat
     1141 gtaggctttg gtcataataa aaatgtttct ttatatggta atgacggtaa cgacactcta
     1201 atcggcgg
//
LOCUS       DAWEYF010000237         1207 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.237, whole genome shotgun sequence.
ACCESSION   DAWEYF010000237 DAWEYF010000000
VERSION     DAWEYF010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.237"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..533
                     /gene="mafB"
                     /locus_tag="WGN93_001965"
     CDS             <1..533
                     /gene="mafB"
                     /locus_tag="WGN93_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ0227817.1"
                     /translation="DQWMQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDF
                     SDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGKHISGHRNYIEGKST
                     LNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKSGLSTNFGTIHSGKN
                     GVHIVPANPKTIKKVQ"
     gene            536..853
                     /locus_tag="WGN93_001966"
     CDS             536..853
                     /locus_tag="WGN93_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227818.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEERRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            954..1207
                     /locus_tag="WGN93_001967"
                     /pseudo
     CDS             954..1207
                     /locus_tag="WGN93_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951255.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
BASE COUNT          406 a          236 c          254 g          311 t
ORIGIN      
        1 ttgaccagtg gatgcaggaa aaccccaatg ccgccgaaac cgtcgaagcc ctggtcaacg
       61 tcctgccgtt tgccaaagtc aaaaacctga caaaggcggc aaaaccgggg aaggctgcgg
      121 ttagtgggga tttctcagac tcctacaagc ataacactgc ttcaagatta tctcagtctg
      181 tagatggaga aatgtttcaa acccgcaatg ttgattttaa agcaaaatct attgggacta
      241 aaattcatga tggagctcaa gggaaacata tttcaggaca tagaaactac attgaaggta
      301 agagtacttt aaatcaaaac attaatcctc aagaattgtt gaacggaata cattcaggtg
      361 cttatccagt tatttctaaa ggagcaagag gaaatcctgt tgttgatttt gggtatccta
      421 taggcagcga tgggaaatca ggattaagta ccaattttgg tacgattcat tcaggtaaaa
      481 atggagttca cattgttccg gctaacccta aaaccattaa aaaggtgcaa tagttatgaa
      541 tatattacca agctggctgc gagtcggtat gaatatagca atgctgggca tgatacactc
      601 agatatcagg ttaattaccg tagattacga ggaaagaaga aggtttttaa aaatcaaaaa
      661 ttatttatca agagaagcca tcacagaaga ccatgaagat atggaatatt tgattacaga
      721 gttatggtct atgtgtggag aatattttga tgaagctgac tttgaatgta tttattctaa
      781 tcattcttct atggagttaa accaaataaa tggtgcagta ttcaggagaa aggaattaat
      841 ttcgcaagcg taggttaaaa aaccaacaat cacaatgtct tctgaaaccg tgtttaattt
      901 tcagacggca tttccttcat ttgaaatagg atattgagaa ctgagttctt caaaaatcct
      961 acacctgctc cttccacggc agcaccttgg tcaaaacggc agacggctac aaagccattg
     1021 cccgtatccg aaccggcgac cgcgtcttcg ccaaggacga ggcaagcgga aaaacgggat
     1081 acaaacccgt taccgcccga tacggcaatc cgtatcaaga aaccgtttac attgaaattt
     1141 cagacggcat cggtaaaata cagaccctcg tttccaataa aatccacccg ttttacagtc
     1201 aaggaaa
//
LOCUS       DAWEYF010000238         1122 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.238, whole genome shotgun sequence.
ACCESSION   DAWEYF010000238 DAWEYF010000000
VERSION     DAWEYF010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.238"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            80..1045
                     /locus_tag="WGN93_001968"
     CDS             80..1045
                     /locus_tag="WGN93_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ0227819.1"
                     /translation="MLRLTALAVCTVLALGACSPQNSDSAPQAKEQAVSAAQSESASL
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGLPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
BASE COUNT          287 a          317 c          295 g          223 t
ORIGIN      
        1 tatcatttat cctttctaaa gccgttccgg tttgtccgac cggcggcttt gccccaatat
       61 ccccattttg gagacaccta tgttacgttt gactgcttta gccgtatgca ccgtcctcgc
      121 cttgggcgcg tgttcgccgc aaaattccga ctctgcccca caagccaaag aacaggcagt
      181 ttccgccgca caatccgaaa gcgcgtccct gactgtcaaa acggcgcgcg gcgatgttca
      241 aataccgcaa aaccccgaac gtatcgccgt ttacgatttg ggtatgctcg acaccttgag
      301 caaactgggc gtgaaaaccg gtttgtccgt cgataaaaac cgcctgccgt atttagagga
      361 atatttcaaa acgacaaaac ctgccggcac gctgttcgag ccggattacg aaacgctcaa
      421 tgcctacaag ccgcagctca tcatcatcgg cagccgcgcc gccaaggcgt ttgacaaatt
      481 aaacgaaatc gcgccgacca tcgaaatgac cgccgatacc gccaacctca aagaaagtgc
      541 caaagagcgt atcgacgcgc tggcgcaaat cttcggcaaa caggcggaag ccgacaagct
      601 gaaggcggaa atcgatgctt cgtttgaagc ggcgaaaact gccgcacaag gcaaaggcaa
      661 aggtttggtg attttggtca acggcggcaa gatgtccgcc ttcggcccgt cttcacgact
      721 gggcggctgg ctgcacaaag acatcggttt gcccgctgtt gacgaagcca tcaaagaagg
      781 cagccacggt cagcctatca gctttgaata cctgaaagag aaaaatcccg actggctgtt
      841 tgtcctcgac cgaagcgcgg ccatcggcga agagggtcag gcggcgaaag acgtgttgga
      901 taatccgctg gttgccgaaa caaccgcttg gaaaaaagga caggtggttt accttgttcc
      961 tgaaacttat ctggcggccg gcggcgcgca agagctgctg aatgcaagca aacaggttgc
     1021 ggatgcgttc aacgccgcga aataatgaaa cggcggcatt cgatgccgtc tgaaacacgg
     1081 atgcaaaccg cttcccgtgt ttcagacggc attgcccgat ac
//
LOCUS       DAWEYF010000239         1112 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.239, whole genome shotgun sequence.
ACCESSION   DAWEYF010000239 DAWEYF010000000
VERSION     DAWEYF010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.239"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            153..1052
                     /locus_tag="WGN93_001969"
     CDS             153..1052
                     /locus_tag="WGN93_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ0227820.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGVLYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQS"
BASE COUNT          189 a          253 c          354 g          316 t
ORIGIN      
        1 gggttttatc tggcaggacg gttttttgcc ccaacggaaa atagcctgcc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttag cacggttttt caggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg tcagcggttt ggtatcggga ctgatgctcg
      661 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gacggtggcg cttttccctt
      721 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
      781 atggcggcgt gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttacctcgg ttcgctgaaa cagcagtctt aatattgatt ccatcaaggc agtattggca
     1081 gttttccgtg caaaacctgc gttaccggac tg
//
LOCUS       DAWEYF010000240         1037 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.240, whole genome shotgun sequence.
ACCESSION   DAWEYF010000240 DAWEYF010000000
VERSION     DAWEYF010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.240"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(301..687)
                     /locus_tag="WGN93_001970"
     CDS             complement(301..687)
                     /locus_tag="WGN93_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEZ0227821.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(684..932)
                     /locus_tag="WGN93_001971"
     CDS             complement(684..932)
                     /locus_tag="WGN93_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEZ0227822.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMENTDISRILEDDNETAALFFEESAL"
BASE COUNT          285 a          244 c          182 g          326 t
ORIGIN      
        1 cacagccata tatattaagt acctgctctt tatgcgcttt tttaggaaag gaagatcaaa
       61 cggttcaata gcgaagtctt gcccaaattt gatggacagg atatagaata catgcgtgca
      121 taccacaccc tgccaaagtt gggagatgca cttaaggttg cacttgtggt cgccaactat
      181 gcctatacac gcggatttcc cgcgtttata ggccgcgacg gaagtctggc ttttaagcga
      241 agacaataac cgaaaagacc gcctcggcgg tctttcttgt gtacacagtt tttatatttg
      301 tcagcttgat gcattgacaa ctctaattcc atattgcgga atatattcat cgacagtcat
      361 cagttcaaag ccttccgctt gggtttgtgc aatcaacatc ctatcgaaag ggtctttgtg
      421 tatttccgga aggcttccag cctgttttgc atgaaacaga cctataggca gcatttcaaa
      481 atcctcttct tgaagcacat caaaaaactc ttccggtaat ttcaacaacc ccttgttctg
      541 cttgatggaa atttcccaaa tacttgctgc actgacaaag atcgcatttc tcggattttc
      601 tatcagtttg cgtgcagata tccccagttt cttgtcatcc aacaaccacc acagcaaagc
      661 atgggtatca agcagaatct ttctcacaga gccgactcct caaaaaataa agctgccgtt
      721 tcattgtcat cctcaagaat acgtgaaata tccgtatttt ccatatgact gaattttttc
      781 aaccttcctg catttcgtgc cggtttttca ataccggtta gttggacgca aggcttacct
      841 gccttcgcaa taataacaat ttcccctgct tctgctcttt gaatcaattg actcaaattg
      901 gtttttgcct gatgaatatt tgcttgaaac ataacacttc tcatgattag ctaacttaac
      961 taatatacat cattaccaag attttgggaa tctcattaca tatatttgat tatatccgcc
     1021 gttttattca caccttg
//
LOCUS       DAWEYF010000241         1027 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.241, whole genome shotgun sequence.
ACCESSION   DAWEYF010000241 DAWEYF010000000
VERSION     DAWEYF010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.241"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..778)
                     /locus_tag="WGN93_001972"
     CDS             complement(<1..778)
                     /locus_tag="WGN93_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ0227823.1"
                     /translation="MIYIDPPYNTGEDSFKYNDKFSHSTWLTFMKNRLEIAKDLLKDD
                     GLIFVQCDDKEQAYLKILLDEIFTRENFINCIAVKMSEPSGNKMAHTSHRLPKIKEYI
                     LIYKNINIKLNPIREQKSEWDDEYNIFLENFTQEDKRFIDLIISSQTENKELNADTLK
                     EIDVLLKKISPISVNQKLAQLNIKDNEVIKWKLDNAYRIIRTAASSSVKKLADEKKEI
                     CQQQFFSVISKRDKLLYIVKSDYSKDAKAPRVQVLFAEDYL"
BASE COUNT          296 a          164 c          150 g          417 t
ORIGIN      
        1 tcaaataatc ttctgcaaac aaaacctgca ctcgtggtgc ttttgcatct tttgagtaat
       61 ctgacttaac gatatacaat aatttatctc gtttagaaat aactgaaaaa aattgttgtt
      121 ggcaaatttc ctttttttca tctgctaatt tttttacgct actactagct gctgttctta
      181 taattctata tgcattatct aatttccatt ttataacttc attatcttta atatttaatt
      241 gggctaattt ttgattaact gaaataggag atattttctt taaaagaaca tcaatttctt
      301 ttaaagtatc agcattcagt tctttatttt ctgtttggct acttattatt aaatcaataa
      361 atcttttatc ttcttgtgta aaattctcta aaaaaatatt gtactcatcg tcccattctg
      421 atttttgctc tctaataggg tttaatttta tatttatatt tttatagata agaatatatt
      481 cctttatttt tggtagtcta tgcgatgtat gcgccatttt gttacctgat ggctctgaca
      541 tttttacagc aatacagttt ataaaatttt ctcttgtgaa aatttcatct aataaaattt
      601 ttaaataagc ctgttcctta tcatcgcatt gaacaaagat tagcccatca tcttttaata
      661 aatctttcgc aatttctaaa cgatttttca taaaagtaag ccaagtggaa tgactgaatt
      721 tgtcgttata tttaaaactg tcttcccctg tattgtatgg cgggtcaata taaatcagct
      781 tcactttacc ttttaactgt ttggcaagcg aatgcagggc aatcagatta ttgcctttga
      841 taataagatt ttcggcgggt gtgccgtctg aatgtcgttt gatttctcca acggcttgtt
      901 tgccgtctgc ggtatagcga gagaattttg agaatgcttt tgcgtcaaaa agccgatcga
      961 tttcatcaaa agcaagcgtt tgattaaaaa agatttcttg tctctttcgg gttaatttgg
     1021 tgtataa
//
LOCUS       DAWEYF010000242          978 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.242, whole genome shotgun sequence.
ACCESSION   DAWEYF010000242 DAWEYF010000000
VERSION     DAWEYF010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.242"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            9..>978
                     /locus_tag="WGN93_001973"
     CDS             9..>978
                     /locus_tag="WGN93_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HEZ0227824.1"
                     /translation="MLEKQHFPRFVIGESLLPHCMEMLEEAGFADAVRAEPGFQLKNG
                     AAFSWGSRYTEFDFTDKFSDGPGTTYQVRRAVFDKILIEEAAKQGVEVRFGHGVTAFD
                     NSGDFVRLNIETDTGKRYELTAKFVLDASGYGRVLPRLLNLETPSHLPPRQAHFTHID
                     DNITNPKFDRNKILITTYPQHRDVWIWLIPFGDNRCSVGVVGTPDKLAGESETVLKKF
                     VYECPMLNEILDKAVWENDFPFRSIQGYSANVKSLHGRHFALLGNAAEFLDPVFSSGV
                     TIALHSAKLAADLLAKQLKGEAADWQTEFAEPLMIGVDAFRTYSGLN"
BASE COUNT          230 a          290 c          253 g          205 t
ORIGIN      
        1 aagtctgcgt gttggaaaaa cagcactttc cgcgcttcgt catcggcgaa agcctgctgc
       61 cgcactgtat ggaaatgctg gaagaagccg gatttgccga tgccgtgcgc gccgagcccg
      121 gctttcagtt gaaaaacggc gcggcgtttt cgtggggcag ccgttatacc gaattcgatt
      181 tcaccgataa attttcagac ggccccggca cgacttatca agtgcgccgc gccgtgttcg
      241 ataaaatcct gattgaagaa gccgccaaac aaggcgttga agtacgtttc gggcacggcg
      301 taaccgcgtt cgacaacagc ggcgattttg tccgcctgaa catcgaaacc gacaccggca
      361 agcgctatga actgaccgcg aaattcgtct tggacgcaag cggttacgga cgcgtgctgc
      421 cgcgcctgct aaacttggaa acgccctcgc acctgccgcc gcgccaagcg catttcacgc
      481 acatcgacga caacatcacc aacccgaaat tcgaccgcaa caaaatcctg attaccacct
      541 atccgcaaca ccgcgacgtg tggatttggc tgattccctt cggcgacaac cgctgttccg
      601 tcggcgtggt cggcacgccc gacaaacttg ccggcgaatc ggaaacagtg ttgaaaaaat
      661 ttgtttacga atgcccgatg ctgaacgaaa ttttggacaa agccgtttgg gaaaacgatt
      721 ttccgttccg ctccatccaa ggctattccg ccaatgtgaa atcgctgcac ggcaggcatt
      781 tcgcgctatt gggcaatgcc gccgagttcc tcgatcccgt gttctcgtcg ggcgtaacca
      841 tcgcgctgca ctccgccaaa cttgccgccg atctgttggc aaaacaactc aaaggcgaag
      901 ccgccgattg gcaaaccgaa tttgccgaac ccttgatgat cggcgtggac gcgttccgca
      961 cctatagtgg attaaatt
//
LOCUS       DAWEYF010000243          961 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.243, whole genome shotgun sequence.
ACCESSION   DAWEYF010000243 DAWEYF010000000
VERSION     DAWEYF010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.243"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            180..509
                     /locus_tag="WGN93_001974"
     CDS             180..509
                     /locus_tag="WGN93_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ0227825.1"
                     /translation="MGSLIIEDLQEGFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            538..795
                     /locus_tag="WGN93_001975"
     CDS             538..795
                     /locus_tag="WGN93_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ0227826.1"
                     /translation="MASSNVNKEIKDKKLSLWAKRQDGSVKWFCGQPVTRTTAGAKDD
                     TVAADTDTAKKIDTKHLPSTCRDAASAVCIETPPTAFYKNT"
BASE COUNT          285 a          263 c          228 g          185 t
ORIGIN      
        1 aaatttaatc cactatattt ccatgaaaaa gcatggaacc tttacgaaaa aaataaaaca
       61 gtcaaacaaa cacagccgtt tcagctgcac cggagcagct gacgtttgag cggcatttga
      121 cttcgccgga cggtatgtta cccttgccgt tttaaccaac aagcaacgaa aggacaaata
      181 tgggcagcct gattattgaa gatttgcagg aaggcttcgg aaaagaagca gttaaaggca
      241 aagagattac cgtgcattac acaggttggc tggaagacgg caccaaattc gactccagcc
      301 tcgaccgccg ccagccgctg accatcacgc tcggtgtcgg acaagtcatc aaaggctggg
      361 acgaaggctt cggcggaatg aaggaaggcg gcaaacgcaa gctgaccatc ccttcggaaa
      421 tgggctacgg cgcacacggc gcgggcggcg tgattccccc gcacgccact ttgatatttg
      481 aagtcgagct gctgaaagtg tacgaataaa gctgcccggg caataccgtc tgacataatg
      541 gcttcaagca acgtaaacaa agaaatcaaa gacaaaaaac tctccctgtg ggccaagcgt
      601 caagacggtt cggtaaaatg gttctgcgga cagccggtta cgcgcaccac cgccggcgcc
      661 aaagacgaca ccgtcgccgc cgacaccgac accgccaaga agatcgacac caagcacctg
      721 ccgtcaacct gccgcgacgc agcatctgcc gtttgcatag aaacaccacc tacggctttc
      781 tataaaaata cctaaaccgt cattcccacg aacctacatc ccgtcattcc cgcaaaagcg
      841 ggaatctagt tcgttgagtt tcagttattt agaataaatt ttgaaacttt aatcccgtca
      901 ttcccacgaa agtgggaatg acgggattta atgatgccgc cagcgtggca tcctccaccg
      961 a
//
LOCUS       DAWEYF010000244          929 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.244, whole genome shotgun sequence.
ACCESSION   DAWEYF010000244 DAWEYF010000000
VERSION     DAWEYF010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.244"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(112..744)
                     /gene="mtrR"
                     /locus_tag="WGN93_001976"
     CDS             complement(112..744)
                     /gene="mtrR"
                     /locus_tag="WGN93_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ0227827.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          208 a          204 c          242 g          275 t
ORIGIN      
        1 ctatgttatt gcaaaggtct caatatgtat ttttagaaga aggctttgtg tcattttgat
       61 gccgtctgaa agggtttgtt cgtttcagac ggcattgtta ccaaggcttg attatttccg
      121 gcgcaggtcg ggatggtttt ccaagttgtc catcattatc ccgatgatgc gcggggcggt
      181 tttgcccaaa tcgaaacgtt cgcaggaaga gaaccaccgc caaatcagcc cgtccaaggt
      241 tgatttgatg aagatgaccg ctgtttcctt gtccaaatcg tcagccaaat cctgattttc
      301 caccgcttcg gtcaaaacgg cggtaatttt ctcgcgccag attgcctgat gcttgcgggc
      361 aatggcgata acggcggcgt tttgttccgt gtgttcgcat tttaaaaaca ggatgttgtg
      421 gaatttgtag tagatgtcgt tgctttgcag ccgctcgaaa aagtgcagca gcgtgtggcg
      481 gaataccgcc caagaccctc cttcggcatc ttcggcatct tgcgcgatgc agttttcgat
      541 gtcgtcgcag atacgttgga acagcgcgtc gaacaagtct tccttatttt tgaaatgcca
      601 atagagcgcg ccgcgcgtta cgccggcggc ttgggcgatt tcgttgagcg aggtgcgcgc
      661 aatccctttg cggtaaaagg tttccaaggc ggcaagcatc aggtgttctt tggttttcaa
      721 ggcttcggtt ttggtttttc tcataatggc gttttcgttt cgggtcggtt tgatgagggc
      781 ggattataaa aaagactttg taaccatgca atcgtgtatg tataatgaaa cccatgaaat
      841 tgagactaca tctcaacttt gaaaacaggc ataacctgct ttgcaacccg ttcgaacatt
      901 cgggtatcaa agcaggcggt ttttatatc
//
LOCUS       DAWEYF010000245          914 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.245, whole genome shotgun sequence.
ACCESSION   DAWEYF010000245 DAWEYF010000000
VERSION     DAWEYF010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.245"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            313..873
                     /locus_tag="WGN93_001977"
     CDS             313..873
                     /locus_tag="WGN93_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HEZ0227828.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINLPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
BASE COUNT          257 a          259 c          183 g          215 t
ORIGIN      
        1 ctataccacg atgaatcctt cgcaatatct gtttatcgac ctcaattttg acaaaatacc
       61 ggatacgcgc ctttgttgct tttccatctt ccaaccaact gtaaatctca aacagccggt
      121 acacgccatg cttcagtttc ttttcctgtc ggcggattgt ttcgacaaag aattgaaaat
      181 ccatttcatg caccttaaaa tttaatctgc attcaaacct tttcactttg gaagcaccat
      241 ttatcggatg tcccttcgca ataaacaaat tttcccgata tcgccgccca tttcaaccca
      301 aacccaaaag ctatgaaaaa cctcatcgcc ttcaacaaac cctatggcgt tatctgccaa
      361 ttttcaccgc acgaaaaaca caaaagcctc aaagacttta tcaatcttcc cggcttctac
      421 cccgccggac ggctcgacac cgacagcgag gggctgctgc tgctgaccga cgacggcagg
      481 cttcaggcac aaattaccga ccccaaattc aaacacccca aaacctactg ggcgcaactg
      541 gagggcgtac ccgacgaaag ccgattggaa agcctaagaa aagggataga cttaggcggt
      601 ttcgttaccc gtccggcaag catccgcatc ttgaaacacg gagaagcaga ttcgttatgg
      661 gagcgcatcc cgccgatacg cgtccgcaaa accgttcccg atttttggat tgaaattacc
      721 atttctgagg gcaaaaaccg ccaagtcagg cgaatgaccg ccaaggcggg ctatccctgc
      781 ctgcgtctga tcagagtggc aagcggcagg ctgaaactgt ttgatttgga tttaaaaccc
      841 ggggaatggg catacgcccc gtttaaacca taatcacgtt tatctcatca tttccacaaa
      901 agtgggaatc cgga
//
LOCUS       DAWEYF010000246          911 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.246, whole genome shotgun sequence.
ACCESSION   DAWEYF010000246 DAWEYF010000000
VERSION     DAWEYF010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.246"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..216
                     /locus_tag="WGN93_001978"
     CDS             <1..216
                     /locus_tag="WGN93_001978"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227829.1"
                     /translation="ADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATLLALDWQG
                     NKPLGAEELADLKPLYKDLKNNIGNIV"
     gene            547..>911
                     /locus_tag="WGN93_001979"
     CDS             547..>911
                     /locus_tag="WGN93_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227830.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLYD"
BASE COUNT          285 a          147 c          213 g          266 t
ORIGIN      
        1 gctgatgccg gagacgtata ttgcgtctat aacatcagac tgaagcagta cactgcctgc
       61 caggttaccc gagttgaaga acacggtggc aaaaaaacac atgcgaccct gctggctttg
      121 gactggcagg gcaacaaacc gcttggggcg gaggagctgg cggatttgaa accactttac
      181 aaagacttaa agaataatat tggaaatatt gtatgaacaa aaaattaaac tatattttta
      241 tgttggactg tttagggttg gtgatattgt ttacttgtat aatagctact tttgaaagag
      301 attatggatt taaaattttt actaattcta agaggcctga attttattat tggattggaa
      361 tgttttatta tggaattatt tcttgctggt ttgattatca attaatttca acaaaggcga
      421 attcgtataa aagaaaagtt aaacaatata aaattttttc agtaatattt tcagttttga
      481 tatttatttc tactatagta aaactttaaa ttttggagca aaaatttatg agcgattcaa
      541 ttgaatatgt attgggaacg cggtctgcac atgtataagg caagtgctgt cgtgccaacg
      601 ggatatgtac gggttgggaa taccgcgccg ctggtcggcg aagacacgca acggtatgcc
      661 tctttttggg gcgacggcta cgacgtgtac cgtcagttga gatggcagca gatacccgaa
      721 aaacagagaa aggcattcaa aaaagccgcc aaaagcaaaa agaccgtgat gtttgccgga
      781 cgggaatacg gcatatccaa acagaatttg agcgatgttt gggatgattt tgaagacgcg
      841 atggaactga aggcgtttcc ctgcctgtct tcgctgtttc tgaccaaatg gcataaaaat
      901 ctatatgata g
//
LOCUS       DAWEYF010000247          911 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.247, whole genome shotgun sequence.
ACCESSION   DAWEYF010000247 DAWEYF010000000
VERSION     DAWEYF010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.247"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(66..845)
                     /locus_tag="WGN93_001980"
     CDS             complement(66..845)
                     /locus_tag="WGN93_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ0227831.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          221 a          290 c          180 g          220 t
ORIGIN      
        1 gtactggttt aaatttagtt cactataccg atacatccga atatgccaga ccgtctaaac
       61 ggtattcata cctcccaatc ctgcacgcgc ttcaaatcgt tttgcgccaa agtatccgcg
      121 tggcggttac ggctctgata ttccctgtct ttcatgatgc tgcttgccac ataattcaaa
      181 tgtgcctttg ccgcctccga agcctcgccc ggccgacggt tcgatatcgc ctcatacagc
      241 acgcggtgct gcgccatcag tttcggacgc ggatcttctt cctgattcag ataaataagg
      301 ctgctgcgcg tctgccggta cagcattttc aacaaaccgc ccgacaaatg gctgaacaac
      361 aaattgtgcg ccgcatccgc aatcgtctga tggaagctga catcggcttc gctctgatgt
      421 tccagattgc cgctttcgca cgcctcctca aacttttcaa gccaaaaccc aatccgcttc
      481 aaatcggcat ccgtccggcg ttctgccgcc aatgccgcca tacagccctc gatgtggcag
      541 ctgaaatcaa aaacatcctg ttcccaattg gaatgcttgc ccaaaagctc ctgccaactt
      601 tgcaaaaaat cctgctgcgg cttgaccgaa acataataac cgtctccctg cctcgcttcc
      661 aaaacctgac gggcaaccaa aacattcaat gccgaccgga ccgacgggcg cgaaacgccg
      721 aactcttccg ccaaaacgcg ttcgggcgga atcttgcccc cttccgcgta aaccccttcc
      781 gcaatgcgct cctccaatac cgacaatacc tgatcgctga ttttctgagg ccttaccagt
      841 ttcattactc ctcctttata aagattccct gcagaaccct tccgaaatat agtggattaa
      901 caaaaatcag g
//
LOCUS       DAWEYF010000248          871 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.248, whole genome shotgun sequence.
ACCESSION   DAWEYF010000248 DAWEYF010000000
VERSION     DAWEYF010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.248"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            132..>871
                     /locus_tag="WGN93_001981"
     CDS             132..>871
                     /locus_tag="WGN93_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEZ0227832.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYM"
BASE COUNT          233 a          201 c          232 g          205 t
ORIGIN      
        1 tctgaagcct tcgcgcctcc cagatgccgt ctgaagtacg ctccgcgcct tcagatggca
       61 tttgatttag ttgaacgggt aggatgaatt ggttaaactt gcgggcaata gtgccttcag
      121 acaaacaaaa tatgccgaac aaaaagaaaa aagccgcctt tgcgcgtgct gcaacggaga
      181 acggtgtgcc ggacgtgtcc aacatcaaaa attcatatga tgatttgatg tatgaatcca
      241 aagcattttc ccaaaccgcc atcaacgcct tggaggctcg cgcccgcatg atgggtttgc
      301 agcccgcgcc cgccgccaat gccaaggtct tggagctggg ctgttcgatg ggcggcaaca
      361 tcatcacgca ggctctttat tacccggatg cggaatttgt cggtatcgac ttgtccggca
      421 ggcaggttgc gcagggcaac gccatcattg aaaaaatggg cttgaaaaat gtgcgtctgg
      481 aagaaaaaga tattttgacc gtcgatgagt cattcgggaa gtttgactat atcatcgtcc
      541 acggcatttg gtcgtgggtg cctgacgcag ttaaagacaa aattttttcg atttgccgga
      601 acaacttgac cgaacacggc attgcctata tttcatacaa tgtttacccc ggctggaaac
      661 ggcaggagca gttgcgcgaa attatgtact ttgccggcag ggatgtgctt gaagaaccct
      721 tggaagcacg gacgcggaaa ggcttggacg cgctcaaggc gctggcggaa attttagaaa
      781 acgacaaggg cttggacggc ggcggcaaac ttccggcgat tcaaaaaata ttgaatcata
      841 atttttatta catcgcacac gaatatatgg a
//
LOCUS       DAWEYF010000249          870 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.249, whole genome shotgun sequence.
ACCESSION   DAWEYF010000249 DAWEYF010000000
VERSION     DAWEYF010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.249"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            348..647
                     /locus_tag="WGN93_001982"
     CDS             348..647
                     /locus_tag="WGN93_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ0227833.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFLFAVLTVLKLKGYQAGLYTLLIALAVAAFGFGMPAGMAVSSLPPQPH"
     gene            587..823
                     /locus_tag="WGN93_001983"
     CDS             587..823
                     /locus_tag="WGN93_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ0227834.1"
                     /translation="MRLRDAGGYGGFFPAAAAALTQRPYATLDLTAHYKIGKSTRIGL
                     DFENVFNKRYRPMPDIHVYGTPRSLTATVKHIVD"
BASE COUNT          246 a          235 c          188 g          201 t
ORIGIN      
        1 atccactata catcaaacat caaattggac tgaccaatca gggcggattc taatgacacg
       61 ccgttcccgc cgtcaacggc atttacctcg caccgccccc gaaacacagg aaaaaactac
      121 accaaactac aatttttgtt tatgcaaata tttgttttga caggatttaa acgaaagctc
      181 cgattcaaat ctgccgaacc gcccaaaaat atatagtgga ttaacaaaaa tcaggacaag
      241 gcgacgaagc cgcagacagt acagatagta cggtaaggcg aggcaacgcc gtactggttt
      301 aaatttaatc cactctattg acctgaatat taaagtttcg caaagtaatg caacgttgct
      361 ttaattggtt tgaccactat tgccgacgat tagaaaaata ttttcggaga tgttcaatta
      421 tggaaacttg ggttcaaaac tacacggcaa tcggcggcag cctgtatctg actgccgccg
      481 ccgcactctt acccatcgtc tttttatttg ccgtgctgac cgtcctgaag ctgaaaggct
      541 atcaggcggg gctttatacg ctgctgattg cgcttgccgt tgccgcattc ggcttcggga
      601 tgccggcggg tatggcggtt tcttccctgc cgccgcagcc gcactgaccc aacgccccta
      661 cgccacgctg gatttgaccg cgcattacaa aatcggcaaa tccacccgca tcggtttgga
      721 ctttgaaaac gtgttcaaca aacgctaccg ccctatgccc gacattcacg tttacggcac
      781 gccgcgcagc ctgaccgcaa ccgtcaaaca tatagtggat taacaaaaat caggacaagg
      841 cgacgaagcc gcagacagta caaatagtac
//
LOCUS       DAWEYF010000250          828 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.250, whole genome shotgun sequence.
ACCESSION   DAWEYF010000250 DAWEYF010000000
VERSION     DAWEYF010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.250"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>828
                     /locus_tag="WGN93_001984"
     CDS             <1..>828
                     /locus_tag="WGN93_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227835.1"
                     /translation="RLEKFDRVALQHFSQYVDLINENNGRLPNTSEIERSYYKAVTEN
                     GVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNAQAVNNPNGSEWDNRKQLISA
                     LDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIGGWGNGIINDLYKSVAKRE
                     WTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKETKKRNGKYHVYDPLALDLD
                     GDGIETVATKGFAGSLFDHTNNGIRTATGWVSADDGLLVRDLNGNGIIDNGAELFGD"
BASE COUNT          262 a          143 c          194 g          229 t
ORIGIN      
        1 ccgtttagag aaatttgatc gggttgcatt gcaacatttc agccaatatg tagatctaat
       61 taatgaaaat aatggtagat tacctaacac tagtgaaatt gagagaagtt actataaagc
      121 cgttaccgaa aatggtgttt cttctagtgc agctattgat ttagttatta atcgctcact
      181 tccggatatg gcagatggtt attgggcatt aggtttgggg atagaagccg aacgtatcca
      241 caatgcgcaa gcagtaaata atccgaacgg tagcgaatgg gataatagaa agcagttaat
      301 atctgcttta gataaaggat ttgatggatc ttttaaagag aagcatttta cttttttaca
      361 atctgtgata atggatgtaa caaagttagg tgttgaatat acaatagatg gttggcaaaa
      421 aattggaggt tggggtaatg ggataatcaa tgatttatat aaaagtgttg caaaaagaga
      481 gtggactgga atatttgaga tcgttaataa taacatcaag caatttagag atctgttccc
      541 aaatccggaa ggctggatcg atgatggtca ccaatgtttc gctccttggg ttaaagaaac
      601 taaaaaacgc aatggcaaat atcatgtcta cgaccccctc gccctagatt tggacggaga
      661 cggtatagaa accgttgcca ccaaaggctt tgcaggcagc ttatttgatc acaccaacaa
      721 cggtatccgc accgccaccg gttgggtttc tgccgatgac ggtttactcg tccgcgattt
      781 gaacggcaac ggcatcatcg acaacggtgc ggaactcttc ggcgacaa
//
LOCUS       DAWEYF010000251          813 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.251, whole genome shotgun sequence.
ACCESSION   DAWEYF010000251 DAWEYF010000000
VERSION     DAWEYF010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.251"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..751)
                     /locus_tag="WGN93_001985"
     CDS             complement(join(<1..532,532..751))
                     /locus_tag="WGN93_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242698.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ0227836.1"
                     /translation="MARTAITDNIWEQLQTTMKAHGCHQWKNDRTVMEAILWKLRTGA
                     PWRDIPIELGSWKTAYNRFNRWSKKGLWQKFFFDLRKEIDKEWVFIDGSYVRCHQHAS
                     GARRGFDRAIGQSRGGNTTKIHLCVDSHGNPLDFKVTGGNVHDGQVANDLIEVIQEAQ
                     YFIADKGYDSQEIRDKAIEHGMKAIIPKRKNAKKPNPDFDSYLYKLRHLVENAFARLK
                     QFRSIATRYEKLARNFKSMLYLACSIIHAKLN"
BASE COUNT          197 a          176 c          160 g          280 t
ORIGIN      
        1 caatttaact tagcatgaat aatagagcaa gccaagtaaa gcatcgattt aaaattacga
       61 gctaatttct catagcgagt agcaatacta cgaaactgct ttaatcgtgc aaatgcattc
      121 tcgactaagt ggcgtaattt ataaaggtag ctatcaaaat cagggttagg tttcttggca
      181 tttttacgct ttggtataat agctttcata ccgtgttcta tcgctttatc tctgatttct
      241 tgcgagtcat accctttgtc agcgataaaa tactgggctt cttgtatgac ttctatcaag
      301 tcgtttgcaa cttgaccgtc gtgcacgtta cccccagtga ctttaaaatc gagcggattt
      361 ccatgcgagt ccacacatag gtgtattttt gtcgtgtttc cgccacggct ttgtccaatt
      421 gctctatcga aaccacgccg agctccactt gcatgttgat gacaccgtac ataacttccg
      481 tcgatgaata cccattcttt gtcaatttct tttcgtagat caaaaaaaaa ttctgccaca
      541 agcctttttt agaccatcgg ttaaagcggt tataagcggt tttccatgac cctagctcaa
      601 taggtatgtc tcgccatggt gcacctgttc ttagcttcca tagtatggct tccatcacgg
      661 tacggtcgtt cttccattga tgacagccgt gcgctttcat ggttgtttgt aattgttccc
      721 atatgttgtc agttattgcg gttctcgcca ttgtttgtgt ttgcctatat ttcgttggaa
      781 tatagggtta aaatagggct cttttgggct tat
//
LOCUS       DAWEYF010000252          769 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.252, whole genome shotgun sequence.
ACCESSION   DAWEYF010000252 DAWEYF010000000
VERSION     DAWEYF010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.252"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..274
                     /locus_tag="WGN93_001986"
     CDS             <1..274
                     /locus_tag="WGN93_001986"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ0227837.1"
                     /translation="PVKRDGTAGTNNDEVKAATGTTANIDTKHLPSTCRDDSSTGCIE
                     TPRADFKHFQKISRYRVLPESRHMAEKLRHSRAGGNPGLSVRKLIG"
     gene            321..>769
                     /locus_tag="WGN93_001987"
     CDS             321..>769
                     /locus_tag="WGN93_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ0227838.1"
                     /translation="MTGFNDAAGVASSPSDIKGKYVQSVTVANGVITAQMASSNVNKE
                     IKDKKLSLWAKRQDGSVKWFCGQPVQRANANGANNDEVTAATGKGTDKIDTKHLPSTC
                     RDASSAVCTKTPEYYLNHGKWPDGNSNAGVASSSTIKGKYVKEVTVA"
BASE COUNT          221 a          237 c          178 g          133 t
ORIGIN      
        1 gccggttaag cgcgacggca ccgccggcac caacaacgac gaagtcaaag ccgccaccgg
       61 caccaccgcc aacatcgaca ccaagcacct gccgtcaacc tgccgcgatg attcatctac
      121 cggttgcata gaaacaccac gcgccgactt caaacacttc caaaaaatca gccgttaccg
      181 agtattgccc gaatcacggc acatggccga aaaacttcgt cattcccgcg caggcgggaa
      241 tccaggtctg tcggtacgga aacttatcgg gtaaaacggt ttcttgagat tttgcgttct
      301 ggattcccac tttcgtggga atgacgggat ttaatgatgc cgccggcgtg gcatcctccc
      361 cctccgacat caaaggcaaa tatgttcaaa gcgttacagt cgcaaacggc gtcattaccg
      421 cccaaatggc ttcaagcaac gtaaacaaag aaatcaaaga caaaaaactc tccctgtggg
      481 ccaagcgtca agacggttcg gtaaaatggt tctgcggaca gccggttcag cgcgccaacg
      541 ccaacggcgc caacaacgac gaagtcaccg ccgccaccgg caagggcacc gacaaaatcg
      601 acaccaagca cctgccgtca acctgccgcg acgcatcatc tgccgtttgc acaaaaacac
      661 ccgagtatta cctgaatcac ggcaaatggc ctgacggcaa cagtaatgcc ggcgtggcat
      721 cttcttcaac aatcaaaggc aaatatgtta aggaagttac agtcgcaaa
//
LOCUS       DAWEYF010000253          766 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.253, whole genome shotgun sequence.
ACCESSION   DAWEYF010000253 DAWEYF010000000
VERSION     DAWEYF010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.253"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..721
                     /locus_tag="WGN93_001988"
     CDS             <1..721
                     /locus_tag="WGN93_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227839.1"
                     /translation="HQFAQSQPLTKTDAKDAKMPAFFAQMTAQKEDSQTMPYQPPTEA
                     EEVLEALVNRRNQPADMRTAEKNRLHQVHETQVGSVKQLIAHFDRLIDELDKQIDNHT
                     HTHFDGKDQVAEQIKGIGSITTATLMAMLPELGRLLHKRIAGLAGIAPHPREGGETKF
                     KSRCFGGRSAVRKALYMATVAATRFEPLIRDFHQRPLSEGKPYKVAVTACMRKLLTIS
                     NARMRDYFAENDTAENGIRTA"
BASE COUNT          205 a          203 c          210 g          148 t
ORIGIN      
        1 gcatcagttt gcccaatcgc agccgctgac caaaaccgac gccaaagatg ccaaaatgcc
       61 cgccttcttc gcacagatga cggcacagaa agaagattcg caaaccatgc cctaccaacc
      121 gcccaccgaa gcggaagaag tgttggaagc cttggttaac cgccgcaacc aaccggcgga
      181 tatgcggact gccgagaaaa accgtctgca tcaggttcac gaaacgcaag tcggaagcgt
      241 caaacaactg attgcccatt ttgaccggct gattgacgaa ttggacaaac aaatcgacaa
      301 ccacacccac acgcattttg acggcaaaga ccaagtggcg gagcaaatca aaggcatcgg
      361 ttcgataacg acggctacgc tgatggcgat gttgcccgaa ttggggcggc tgttgcacaa
      421 acggatagcg ggtttggccg gcattgcccc gcacccgagg gagggcgggg aaaccaaatt
      481 caaaagccgc tgctttggcg gaaggtctgc ggtgcgtaaa gcactgtata tggctaccgt
      541 ggcagcgaca cgttttgaac cgcttattcg ggatttccac caacgcccgc tgtccgaggg
      601 taagccgtat aaggttgccg ttacggcatg tatgcgcaaa ctgctgacga tatcgaatgc
      661 ccggatgcgt gattattttg ccgaaaacga taccgccgaa aacggtatcc ggacggcttg
      721 atttgagttt tggtattttt gcccgacggg gtgaaaaata cagttg
//
LOCUS       DAWEYF010000254          733 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.254, whole genome shotgun sequence.
ACCESSION   DAWEYF010000254 DAWEYF010000000
VERSION     DAWEYF010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.254"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(53..619)
                     /locus_tag="WGN93_001989"
     CDS             complement(53..619)
                     /locus_tag="WGN93_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ0227840.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMLREGLSGGADDVREAKRES
                     WWLTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMATTVMVTVGLTAGRALGVLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          218 a          252 c          147 g          116 t
ORIGIN      
        1 aaggcgaggc aacgacgtac tggtttttgt taatccacta tattttccga catcattgaa
       61 tcaaacccaa atgcgacaag agcgtccatg taccgatggc aatcaacacc aaacctccgg
      121 caaactcggc gcgtttgccg aacaatacgc ccaaagccct tcccgccgtc agcccgaccg
      181 taaccatcac cgtcgtcgcc atgccgatga cggcggcggc aaaggcgatg tttacctcca
      241 taaacgccaa gcccaccccg actatcatgg aatcaatact ggttccaaaa gcagtcagaa
      301 ccgtcaacca ccagctttcc cgtttggctt cgcgcacatc gtccgccccg ccggacaagc
      361 cctcacgcaa catcttcaga cccagcccgc ccagcaggac gaaagccgcc caatggtccc
      421 attcgctgat aaacggcttg gcataaaaac cgcccaccca gcctgccagc ggcgtgagcg
      481 cttcaaccgt gccgaacacc aaagccgttg ccgcaatttt gcgcggaggc attctgaccg
      541 ccgcaccctt tgccaatgcg acggcaaacg catccatcga catccccagc gcaatcaaga
      601 gcaaagcata aaaacccata ccgcacccgt cctcaaaaag ggcggattat agcaaaagca
      661 aaaaaatgca aaaacgccgc acgaaaaccc acatcccgtc attcccgcaa aaacaaaaaa
      721 tcaaaaactg aaa
//
LOCUS       DAWEYF010000255          733 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.255, whole genome shotgun sequence.
ACCESSION   DAWEYF010000255 DAWEYF010000000
VERSION     DAWEYF010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.255"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..446
                     /locus_tag="WGN93_001990"
     CDS             <1..446
                     /locus_tag="WGN93_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ0227841.1"
                     /translation="GKAQVAEQIKGIGSITTATLMAMLPELRRLSHKRIAGLAGIAPH
                     PREGGETKFKSRCFGGRSAVRKALYMATVAATRFEPLIRDFYQRLLSEGKPYKVAVTA
                     CMRKLLTISNARMRDYFAENDTAENDTAENDTAENDTAENGIRTA"
BASE COUNT          176 a          177 c          216 g          164 t
ORIGIN      
        1 acggcaaagc ccaagtggcg gagcaaatca aaggcatcgg ttcgataacg acggctacgc
       61 tgatggcgat gctgcccgaa ttgaggcggc tgtcgcacaa acggatagcg ggtttggccg
      121 gcattgcccc gcacccgagg gagggcgggg aaaccaaatt taaaagccgc tgctttggcg
      181 gaaggtctgc ggtgcgtaag gcactgtata tggctaccgt ggcagcgaca cgttttgaac
      241 cgcttattcg ggatttctac caacgcctgc tgtccgaggg taagccgtat aaggttgccg
      301 ttacggcatg tatgcgcaaa ctgctgacga tatcgaatgc ccggatgcgt gattattttg
      361 ccgaaaacga taccgccgaa aacgataccg ccgaaaacga taccgccgaa aacgataccg
      421 ccgaaaacgg tatccggacg gcttgatttg agttttggta tttttgcccg acggggtgaa
      481 aaatacagtt gctacggctc gatgaatcgt cagaaatacc cgaaccgtca ttcccgcgca
      541 ggtgggaatc cagaccggtc ggtgcggaaa cttatcggga aaaaaggttt ctccgtccct
      601 gaatcctgga ttcccacttt cgtgggaatg acagaatgta ggttcgtggg aatgacgtgg
      661 tgcaggtttc cgtgcggatg aattcatcat tcccgcgcag gcgggaatct agtctgttcg
      721 gtttcagtta ttt
//
LOCUS       DAWEYF010000256          728 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.256, whole genome shotgun sequence.
ACCESSION   DAWEYF010000256 DAWEYF010000000
VERSION     DAWEYF010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.256"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            20..>728
                     /gene="rpe"
                     /locus_tag="WGN93_001991"
     CDS             20..>728
                     /gene="rpe"
                     /locus_tag="WGN93_001991"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ0227842.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQV
                     RAMLDRYEEKSGRRIAIEVDGGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEI"
BASE COUNT          178 a          171 c          210 g          169 t
ORIGIN      
        1 gatattgaag gaaaaaaaca tgactactta ccgtatcgca cccagcattt tatcggcaga
       61 ttttgcacgg cttggcgaag aggtggaaag cgtcattgcg gcaggtgcag atctgatcca
      121 ttttgacgtg atggacaacc attatgtgcc gaacctgacc ttcggcccta tggtttgcgc
      181 ggcgttgaag ccttatgcaa gtgtgccgat cgatgtgcat ctgatggtcg aacccgtgga
      241 tgacctgatt cagtcgtttg ccaaagcagg agcatcaatc atcacgttcc atcccgaagc
      301 gagccgccat attgaccgca gcttgagcct gattcgggac atgggctgtc aggcggggct
      361 ggtgttgaat ccggcaacgc ccgtatatct gttggaaaac gtattggaca ggctggatat
      421 ggttttgctg atgtcggtaa accccgggtt cggcggtcag agcttcattc cgtatacttt
      481 ggaaaaaatc agacaggttc gtgccatgct tgaccgctat gaagagaaaa gcggcagacg
      541 tattgccatt gaagtggacg gcggcatcaa aaccgacaat atcgccgccg ccgcccaagc
      601 cggcgcggat acctttgttg ccggttctgc gattttcggc aaaccagact ataaggcggt
      661 gattgatgcg atgagggcgg aactggaaaa aagcggcagg ctgaaccttg cgccaatgat
      721 tgaaatag
//
LOCUS       DAWEYF010000257          726 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.257, whole genome shotgun sequence.
ACCESSION   DAWEYF010000257 DAWEYF010000000
VERSION     DAWEYF010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.257"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(129..>726)
                     /locus_tag="WGN93_001992"
     CDS             complement(129..>726)
                     /locus_tag="WGN93_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ0227843.1"
                     /translation="LSIGQIVKVKPAGYAAPKTSAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          165 a          209 c          193 g          159 t
ORIGIN      
        1 ccaaacacag tcaaacaaat ttatatgccc catcccttcc gaataatttg aaaacacagc
       61 cgccaaaaac aaaaatgccg tctgaaaacc tttcagacgg catttccaac ttgatttcag
      121 gcagaaagtc agaacgcgat atagctgttc ggattaaccg gtttgccgtt ttgccgcacc
      181 tcgaaatgaa gctgcgttct agaagcgtcg gtattgccca tcaaagcgac ctgctgcccg
      241 cgtttgacct gctggccttc gccgaccagc aatttttggt tgtgcccgta tgcggtcagg
      301 aaggaagaat tatgctggat gatgaccaaa ttgccgtatc ccctcaaacc ggaacctgca
      361 taaaccactt tgccgtcagc cgccgccaaa acgggctgtc ccgcatttcc tgcaatatcg
      421 acacccttat tgttgccgcc gaaatcggca accactttac cttgcgtcgg acgctgccaa
      481 acaatgccgc cgaccgaacg cgtgccggaa ggcgaagcgg caggagattg cggggcgggc
      541 gcgggaaccg ctttattttc cgcagcgggc gcggcaggtt gcggcgcgga ctgcacaggc
      601 ggttgcgcgg cgggtttcac aggggtttgc acggcagccg gtacggcggg cctgctttct
      661 acggctgagg ttttcggtgc ggcatatcct gccggtttga ctttaacaat ctgaccgatg
      721 ctcaac
//
LOCUS       DAWEYF010000258          706 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.258, whole genome shotgun sequence.
ACCESSION   DAWEYF010000258 DAWEYF010000000
VERSION     DAWEYF010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.258"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            28..705
                     /locus_tag="WGN93_001993"
     CDS             28..705
                     /locus_tag="WGN93_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HEZ0227844.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT          218 a          137 c          156 g          195 t
ORIGIN      
        1 catcaaaaaa cctgataagc tcctaatatg aaactaaaaa ataagtatca aaagttcagc
       61 aaaatttcag agcaaaagtt tagagaaata atccgctgtt tcgctcttga tttgaccgct
      121 tccgatactg ctaaaatgac cggcattagt gtacgcggta tcaatcctat tttcctgaaa
      181 atcagacaca ggattgctgc tctgtgcgaa caaagctcac cactgtccgg tgtggtcgaa
      241 ttagatgaat cttactttgg tgcgcgacgt atcaggggta agcgcggtcg cggagcgtca
      301 ggtaaaacca tcgtatttgg catactgaaa cgcaatggcg tggtctatac ggaaatcgtt
      361 cccgacgctt cgaaagcctc actaatcaag gtcatacgtg gtcacatatc tgctgacagt
      421 gaaatcaata ctgacggctg gaaagcatat gacggtcttg tcgatatggg ctatgagaag
      481 cattaccgtg tccatcatgg ttccaatgag tttgctcgag gaaagcaaca tatcaatggt
      541 attgaatctt tttggagtta tactaagggg cgtttggcta aatttcatgg tatttccaaa
      601 gagatgtttt atctgcatct caaagaaacg gagtttaggt ttaaccaccg gcatgaagat
      661 ttaggtaaaa tattaatgaa gatgcttcga aataacccaa tttaat
//
LOCUS       DAWEYF010000259          654 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.259, whole genome shotgun sequence.
ACCESSION   DAWEYF010000259 DAWEYF010000000
VERSION     DAWEYF010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.259"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(53..538)
                     /gene="fxsA"
                     /locus_tag="WGN93_001994"
     CDS             complement(53..538)
                     /gene="fxsA"
                     /locus_tag="WGN93_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ0227845.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          195 a          211 c          116 g          132 t
ORIGIN      
        1 tttcaaaccg gaaaaatgcc gtctgaatct tcagacggca ttccattcat atttattcgt
       61 cttttttgtg ttcgatggcg tttcgggaac gattgccgcc gtaaggctct tcaaccgtat
      121 attccccctc gataatatcg tcatcgcggg aaaagccctc ttttctgccc gattggttca
      181 tgttgaaaaa attttccgca cctcctgcct gcaacactgc acctccctta aacggcagca
      241 gcagcaatac cgccaacacc gaggatacga atcccggact catcagacac accgccgcca
      301 ccgtataacg gataggccac aacatctgat aaacggatac cctcccgccg cttctcattg
      361 ccgcgcccgc caataaaaga ccggacagcc ccgtatgcct gagcatcagc acaccggcgg
      421 caaaacctgc cgccatcaaa aacaacgtcc agccgccgcc caaccaatcg gcaacccaca
      481 caatcgacat aatctccaaa aacagcagca ccaaaaaacc gataccgaaa aatctcattg
      541 accgtcatcc ttatatttaa gtaaacagca aaccgcccga acaagactcc aagcgacctg
      601 cctgtaaatg attacaaaac catgtgcttc aagccgaaac aatgtgaaat cacg
//
LOCUS       DAWEYF010000260          636 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.260, whole genome shotgun sequence.
ACCESSION   DAWEYF010000260 DAWEYF010000000
VERSION     DAWEYF010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.260"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..584)
                     /locus_tag="WGN93_001995"
     CDS             complement(<1..584)
                     /locus_tag="WGN93_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ0227846.1"
                     /translation="MIASRLSGNISSAIQEHKDGKVNINRFQNILADLYSLGGLGSTL
                     IEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEFYNFDNWKGFGYELFEDWSR
                     WVYDWLPDGWNLWKELDRNRSGQYHIYDPLALDLDGDGIETVATKGFSGALFDHRNQG
                     IRTATGWVSADDGLLVRDLNGNGIIDNGAELFGD"
BASE COUNT          160 a          160 c          136 g          180 t
ORIGIN      
        1 ttgtcgccga agagttccgc accgttgtcg atgatgccgt tgccgttcaa atcgcgcaca
       61 agcagaccgt catcggcaga aacccaaccg gtggcggtgc ggatgccttg gttgcggtgg
      121 tcgaacaatg cacctgaaaa gcctttggtg gcgactgttt ctatgccgtc gccgtctagg
      181 tctagggcga gggggtcgta gatgtggtat tggcctgaac ggtttctgtc caattctttc
      241 cacagattcc agccgtcggg cagccagtcg tatacccaac gagaccagtc ttcaaatagc
      301 tcatacccaa aacctttcca gttgtcaaaa ttataaaatt cctctgtaga tatcgtacca
      361 gtatctcctg tggcaatagc cgttgctgca attatatctc cagcaattgc taatggaatc
      421 ccccaactct gcatatttcc attcttctct attaatgtac ttcctaaccc tcccaatgaa
      481 tataaatccg ctaaaatatt ttgaaaacgg ttgatattaa ctttaccatc tttatgctcc
      541 tgaatagctg aagatatatt tccagagaga cggcttgcaa tcacagaggc atttgttccg
      601 tttacaatat gcgatgacgt actacctggt gcaata
//
LOCUS       DAWEYF010000261          627 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.261, whole genome shotgun sequence.
ACCESSION   DAWEYF010000261 DAWEYF010000000
VERSION     DAWEYF010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.261"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>627
                     /locus_tag="WGN93_001996"
     CDS             <1..>627
                     /locus_tag="WGN93_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ0227847.1"
                     /translation="RSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQID
                     NAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAA
                     DGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDD
                     CPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPI"
BASE COUNT          167 a          185 c          150 g          125 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggtggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgtccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggtgccgc acaaatggac ggtgcaatct tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gccaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatc gtacaaggtt ccgcactgaa agccttggaa ggcgatgccg cttacgaaga
      541 gaaaatcttc gaattggctg ctgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaacct ttcttgttgc ctatcga
//
LOCUS       DAWEYF010000262          616 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.262, whole genome shotgun sequence.
ACCESSION   DAWEYF010000262 DAWEYF010000000
VERSION     DAWEYF010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.262"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>616
                     /locus_tag="WGN93_001997"
     CDS             <1..>616
                     /locus_tag="WGN93_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS30-like element IS1655 family transposase"
                     /protein_id="HEZ0227848.1"
                     /translation="IYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVG
                     IENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARA
                     AVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLI
                     RQYFPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNL"
BASE COUNT          198 a          168 c          136 g          114 t
ORIGIN      
        1 catttaccgc taccttcgcc aagacaaaag caacggcagc acgttgtggc aacatctcag
       61 aatatgcagc aaaccctacc gcaaacgcta cggcagcaca tggaccagag gcaaagtccc
      121 caaccgtgtc ggcatagaaa accgacccgc tatcgtcgac cagaaatccc gtatcggcga
      181 ttgggaagcc gacaccattg tcggcaaagg acagaaaagc gcattattga ccttggtcga
      241 acgcgttacc cgctacacca tcatctgcaa attggatagc ctcaaagccg aagacactgc
      301 ccgggcagct gttagggcat taaaggcaca taaagacagg gtgcacacca ttaccatgga
      361 taacggcaaa gagttctacc aacacaccaa aataaccaaa gcattgaaag cggagactta
      421 tttttgtcgc ccttaccatt cttgggagaa agggctgaat gagaacacca acggactcat
      481 ccggcaatac ttccccaaac aaaccgattt ccgtaacatc agtgatcggg agatacgcag
      541 ggttcaagat gagttgaacc accgaccaag aaaaacactt ggctacgaaa cgccaagtgt
      601 tttattcttg aatctg
//
LOCUS       DAWEYF010000263          607 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.263, whole genome shotgun sequence.
ACCESSION   DAWEYF010000263 DAWEYF010000000
VERSION     DAWEYF010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.263"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            61..444
                     /locus_tag="WGN93_001998"
     CDS             61..444
                     /locus_tag="WGN93_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ0227849.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNALLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
BASE COUNT          148 a          145 c          155 g          159 t
ORIGIN      
        1 ggcaacgccg tacaggtttt tgttaatcca ctatattgag aacattttga aaggataccg
       61 atggaacctt cctcctacgc ggcagaaaaa aaaggcaaag gcggcatcag gcgcgtcatt
      121 aacgcattcg gctattcgat agacggcatc gccgccgcct accgttacga agcggcattc
      181 cgtcaggttt tgtggctgaa cgcgctgctg gtgtgtgcgg catttttttg ggtttccgaa
      241 accgccgtcc gcctgccgtt gattatcgcg tcttttgtgt cggtcattgt cgaactgttc
      301 aacaccgccg tcgaagctgc cgtcgatcat acttcgaccg aaaaacacga gctggccaaa
      361 cgcgccaaag acgcaggttc tgccgcacaa ttgttcgcga tgctgatgtt ggcggcggtt
      421 tggctgtctg ccctgttcgg gtaaaacgct tgcagcagga tttgtaatcc tttaggatta
      481 gtatgtggta tttattattc acttaatcta catcaaattt ccaggcagta tttgtatgta
      541 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg
      601 aaccgat
//
LOCUS       DAWEYF010000264          600 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.264, whole genome shotgun sequence.
ACCESSION   DAWEYF010000264 DAWEYF010000000
VERSION     DAWEYF010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.264"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..151
                     /locus_tag="WGN93_001999"
     CDS             <1..151
                     /locus_tag="WGN93_001999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227850.1"
                     /translation="SIRQGKPEEEFSRKMAGCLTDLENCLEKYLEQFGPVSESIEACT
                     VKLQE"
     gene            173..466
                     /locus_tag="WGN93_002000"
     CDS             173..466
                     /locus_tag="WGN93_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227851.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPDCFDMKAVWQMFNRIPR"
BASE COUNT          159 a          151 c          160 g          130 t
ORIGIN      
        1 gtccattcgg cagggaaagc ctgaagaaga attttcccgc aagatggccg gctgcctaac
       61 cgacttggaa aactgtttgg aaaaatacct cgaacagttc gggccggtat cggaaagtat
      121 cgaagcctgt accgtcaaac tgcaggagta accgtcgttc ttcaacaggc tgatgaaaac
      181 caacgacaag ctcaataggc agattgacgt gttgcagaaa cagtcggcag ccatccacaa
      241 cgaagcctat atcgaaatga acacgctgct ttaccgccac cgcgaagtgg tttccgtcca
      301 caaccgcaag gcggattatg cggaaaaggg caaagagcgg attgcgctgt tcccgcgcgg
      361 cttgaacggc atcaccaagc tgcctgccgc cgtcctgttg cccgagcgtc ccgattgttt
      421 tgatatgaag gcagtttggc aaatgtttaa tagaataccg aggtaggcgt atcggctgcc
      481 ggataaaaat gccgtctgaa acggaagcgt tcagacggca ttgttgcagt ggaacaaatc
      541 aaaatgcacc ccgtcattcc tgtctgtacg gtgatagcgg cagtgttttc ctgcttcgtt
//
LOCUS       DAWEYF010000265          596 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.265, whole genome shotgun sequence.
ACCESSION   DAWEYF010000265 DAWEYF010000000
VERSION     DAWEYF010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.265"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..379)
                     /locus_tag="WGN93_002001"
     CDS             complement(<1..379)
                     /locus_tag="WGN93_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227852.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSYLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKF"
     gene            complement(363..>596)
                     /locus_tag="WGN93_002002"
     CDS             complement(363..>596)
                     /locus_tag="WGN93_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ0227853.1"
                     /translation="VIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFSDNS
                     EMVIKESLKDGHKIYKFEFCEIVDNCNFDDVFV"
BASE COUNT          167 a          117 c          111 g          201 t
ORIGIN      
        1 caaatttgtc ggtttcggtg tcgtattggt agcctcgtgc ctgtatgtct tctttgaaag
       61 tttcgtatac gtcatgggct aaaagggctg ttccgacata gggaaccgcc cttgtgctga
      121 atttcgcgcc taagcgggca agtttgccgc cccccgccaa tacgccggcg cgggaaatgc
      181 tggcggttat tttggcgttg attcgggctt ttgcgcccgt agggatgtgt gttaaatcta
      241 ccgtttttat taaataagat gaataagttt tactattttt aggtacaaac ttatgaattt
      301 tcgcaccttg tccggtatca actgaaacag tttcagatat ttttactgca tttgcattcg
      361 cttcaaacga atacatcatc aaaattgcaa ttatcgacaa tttcgcaaaa ttcaaatttg
      421 tatattttat gaccatcttt cagggattct ttaattacca tttctgaatt atcagaaaat
      481 gagattagcc aaatatcatg tttaattctt ctattccaga aaaaagagaa acaatcaata
      541 acattttcag acttattaat cttcgcaaat tcaacaaatt cagattgcgc tataac
//
LOCUS       DAWEYF010000266          587 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.266, whole genome shotgun sequence.
ACCESSION   DAWEYF010000266 DAWEYF010000000
VERSION     DAWEYF010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.266"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            49..>587
                     /locus_tag="WGN93_002003"
     CDS             49..>587
                     /locus_tag="WGN93_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Opacity protein opA54"
                     /protein_id="HEZ0227854.1"
                     /translation="MTHDYPKATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGGWRI
                     AADYASYRKWNNNKYSVNTKEVLRNNNGNRKELKTENQENGTFHAASSLGLSAIYDFK
                     LNDKFDKFKPYIGARVAYGHVKHQVHSVKKETTTTFLAPTQGATVPGKIVEGPFSKPA
                     YHESHSISSLGLGVIAGVG"
BASE COUNT          180 a          153 c          130 g          124 t
ORIGIN      
        1 cgcagcccgt attatgtaca ggcggattta gcttatgccg ccgaacgcat tacccacgat
       61 tatccgaaag caaccggtgc aaacaacaca agcacagtaa gcgattattt cagaaacatc
      121 cgtgcgcatt ccatccaccc ccgggtgtcg gtcggctatg atttcggcgg ctggaggata
      181 gcggcagatt atgccagtta cagaaaatgg aacaacaata aatattccgt caacacaaaa
      241 gaggtgctaa gaaacaataa tggcaacagg aaagaactga agacggaaaa tcaggaaaac
      301 ggtacattcc acgccgcttc ttctctcggc ttatccgcca tttacgattt caaactcaac
      361 gataaattcg ataaattcaa accctatatc ggtgcgcgcg tcgcctacgg acacgttaaa
      421 catcaggttc attcagtgaa aaaagaaacc acgactactt tccttgcacc aacgcaaggc
      481 gctacagtgc caggcaagat cgtagaaggt ccgttcagca aacctgccta tcacgaaagc
      541 cacagcatca gcagcttggg tcttggtgtc atcgccggtg tcggttt
//
LOCUS       DAWEYF010000267          578 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.267, whole genome shotgun sequence.
ACCESSION   DAWEYF010000267 DAWEYF010000000
VERSION     DAWEYF010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.267"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            169..>578
                     /locus_tag="WGN93_002004"
     CDS             169..>578
                     /locus_tag="WGN93_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227855.1"
                     /translation="MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLSNDELKRHFFVKVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRN"
BASE COUNT          192 a          116 c          119 g          151 t
ORIGIN      
        1 cgcaaaattc cgacacactc ggacacccgc cccgcttatc gcaactttgc gaacgccccc
       61 ggaaacagca aagacatcaa aggattgatt ttattagaat ttatttgcaa agccatttgc
      121 cgttacacaa gaatggcaca ttaaaataac tgatgaggat ttataacgat gaagacagac
      181 attcaaaccg aattaaccca agccctgcta tcacacgaaa aagtatgggc gaacgaagaa
      241 aaaaccattt tagccaaaaa cattctgttg gatttggtgg aaaaaaccga cccgaccatt
      301 atcggtttgt tattgagtaa tgatgagtta aaacgccatt tctttgtgaa agtgaatggt
      361 gtgctggtgt ttaaattgca ggatttccgt tttttcttgg acaaacacag cgtcaataat
      421 tcctacacaa aatacgccaa ccgcattggt ttgacggacg gcaaccgctt tttgaaagac
      481 agttcggata ttgtgttgga ttttccgttt aaagattgcg tattgaatgg cggacaaagc
      541 accgaagaag gcgaagagat ttattttaaa cgcaataa
//
LOCUS       DAWEYF010000268          555 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.268, whole genome shotgun sequence.
ACCESSION   DAWEYF010000268 DAWEYF010000000
VERSION     DAWEYF010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.268"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT          184 a           98 c           77 g          196 t
ORIGIN      
        1 tagaaattag ttaaagaata tattatggta gatactaact ctttagttaa aaataattta
       61 ctaactttta ctacttaggt ataaattcca atacttaact aaactgaggg taaatatatt
      121 tatccaagat agaagagaaa cttttttctc tgtttccgca agaatagtta cgggttgtga
      181 aatatgctct atacccaagc agtagatatt ttcattgtta cttaccgtat tgcttcatag
      241 aattggcact ctacgctttc ctttaaaaat cgtcaataac gattatcatt ttctttaaat
      301 ttattcaaaa caatattctt atatacatct caagcccgct gaaataaagc aaaatggtgg
      361 ttcatcgact gtaatgccaa tttcaaagca gcctgcactt tgacaacaca caagatatac
      421 gggaaggaca gggcatcagc atatatttca gcccgaagcc gtttcattcg tttaaaaaac
      481 tgcttttttc acaatttacc tttacaaagc ctatacgtat ccttacaatt tgttttgctg
      541 tttttggtat atttt
//
LOCUS       DAWEYF010000269          549 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.269, whole genome shotgun sequence.
ACCESSION   DAWEYF010000269 DAWEYF010000000
VERSION     DAWEYF010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.269"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(16..507)
                     /locus_tag="WGN93_002005"
     CDS             complement(16..507)
                     /locus_tag="WGN93_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227856.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEY
                     TIRDEADFAWHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
BASE COUNT          161 a          138 c          115 g          135 t
ORIGIN      
        1 gaatccgaca ttacttcaat cgtatccaat agaaaagtcc gcattgccgc caccccaatt
       61 atgcggataa ataccctgtt tgacataacg gtgaaacgta gaaaaccccc aatcggaaat
      121 ttgtcctaca tagccatgtt tgaccggatt gaaatgcaga taatcaaaat gccaggcaaa
      181 atcggcctca tcgcggatag tatattccca aaagcgtttt tgccaaagcc tgagattgcc
      241 gccgattaaa tattggctgt gccgcttgat ttgccgccag cgttccgaat aagcagaatc
      301 attgtccggc agccgccata tggtatgaag atggtcgggc atcaacaccc atgccaaaat
      361 ttcaaacgga taccgttcgc gcaccgccat taccgcctgc cgcaaagcca aacgcaccgc
      421 atcatcggtc aaaatcttct gccgtttatt ggttacaacc gtaaaaaagt aagtgccgcc
      481 attgcggtaa aaacgacggt atttcatagt attatgctcg gaatgatttt gtaggtcgga
      541 ttcttgaat
//
LOCUS       DAWEYF010000270          519 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.270, whole genome shotgun sequence.
ACCESSION   DAWEYF010000270 DAWEYF010000000
VERSION     DAWEYF010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.270"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            110..>519
                     /locus_tag="WGN93_002006"
     CDS             110..>519
                     /locus_tag="WGN93_002006"
                     /inference="COORDINATES: protein motif:HMM:NF024751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227857.1"
                     /translation="MDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSLVSAQVGN
                     RLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHK
                     VLPLAPYSPELNPIEKVWANIKRYLRTVLSDYAR"
BASE COUNT          147 a          118 c          123 g          131 t
ORIGIN      
        1 tggggataac gcgcaaaaaa agaccaccac ttacaaagaa caagacccgg ccaaagtaac
       61 gcattatttg acacagccgg ccgaattttc cgactaccaa cgtgtttatt tggatgaaac
      121 aggatttgac cgctacctgt tccgtcccta tgcccgcagc ctgaaagggc aaatagtgaa
      181 agcgcagata agtggaaaaa gataccaacg cttatctttg gtgtccgcac aagtcggcaa
      241 ccggctgatt gctccgatgg tttatcaaaa tacgatgacc ggagtctttt ttgaagcgtg
      301 gtttcagcaa tgcctactgc ccgcattgac tcaaaaatcg gtgattattt tagataatgc
      361 gcgatttcac cgtatgggtg tcttacggga aatggcggaa aaattgggac ataaggtatt
      421 gcctcttgca ccttattcac ctgagctcaa cccgattgag aaagtgtggg cgaatattaa
      481 gcggtatctg cgaaccgttt tgtctgatta cgcccgatt
//
LOCUS       DAWEYF010000271          512 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.271, whole genome shotgun sequence.
ACCESSION   DAWEYF010000271 DAWEYF010000000
VERSION     DAWEYF010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.271"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(328..403)
                     /locus_tag="WGN93_002007"
     tRNA            complement(328..403)
                     /locus_tag="WGN93_002007"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(367..369),aa:Glu,seq:ttc)
BASE COUNT          140 a          123 c          134 g          115 t
ORIGIN      
        1 cattgaatac tttgatgctt tggtgggctg aagcccaccc tacaatatag agaaaatgcc
       61 gccaaacggt atggaagcgg aaacaatggt ggggctggct tcagaaacaa tggtagggtg
      121 ggcttcagcc caccgcttta gacggcatcc gcgcaccgtc attcccgcgc aggcgggaat
      181 ccagccttgt cggcacggaa acttatcgga taaaacggtt tcttcaaccc tacgctctag
      241 attcccgttt tcacgggaat gacgaagagt gtgagaatga cggttcataa ataaaaaaac
      301 ctgcttaaaa caagcaggtt tttgaattgg cacgcccacg gggattcgaa ccccggttgc
      361 cgccgtgaaa gggcagtgtc ctaggcctct agacgatggg cgcgtgggaa tgggcattat
      421 acatacttct agaaatttag caatacgatg ccgtctgaaa cttcgtcatt cccgcgaaag
      481 cgggaatcta gaatctccaa gttttcagac aa
//
LOCUS       DAWEYF010000272          503 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.272, whole genome shotgun sequence.
ACCESSION   DAWEYF010000272 DAWEYF010000000
VERSION     DAWEYF010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.272"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            219..425
                     /locus_tag="WGN93_002008"
     CDS             219..425
                     /locus_tag="WGN93_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227858.1"
                     /translation="MFDGAKVVRRVEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSV
                     YLKQTGKGSNILQSSYSHKRFIVN"
BASE COUNT          151 a           82 c          136 g          134 t
ORIGIN      
        1 ttggggggta tcggagcgga acgtctgaaa aagggtttca ggcggtcttt gggcgtgtgg
       61 taacagtcga aaacgtgata aggctacctg aaaagtttgg gagattttca ggtagtcttt
      121 ggtattgggc gcaacagacg caggtacaga ttaggcggtg tgccgtaatc gtacgaatgc
      181 cgattcaacc taagcagaca tcagtattta ggaagtggat gtttgatgga gcaaaggttg
      241 tacgaagggt ggaaggcaac ctgtgggtgt ttggtatggt cgcgcttgaa aaaacgtgtt
      301 ttaagggaca aatgccgtct gaaaatcggt ttcagacggc attttctgtt tatttaaagc
      361 aaacaggaaa aggcagcaat attctgcagt cttcctattc acacaagcgt tttatagtta
      421 attaaaaaca aaatagtaca atactcaact ttgaaggtct aaccatggca tactctgcgg
      481 acttaagaaa caaagcttta aac
//
LOCUS       DAWEYF010000273          495 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.273, whole genome shotgun sequence.
ACCESSION   DAWEYF010000273 DAWEYF010000000
VERSION     DAWEYF010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.273"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..495
                     /locus_tag="WGN93_002009"
     CDS             <1..495
                     /locus_tag="WGN93_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ0227859.1"
                     /translation="LKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITI
                     AEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTIL
                     KGVCIPNNVVVGSHTVLYKSFKEPNCVIAGSPAKIVKENIVWGRKMYHSTMYDDPTLN
                     EFYK"
BASE COUNT          182 a           66 c           93 g          154 t
ORIGIN      
        1 ttaaaaggaa ataatataac cttatttata gctgatgatg tagaaatcat gggactagta
       61 tgttcccttc attcggactg ctctttacaa attcaagcca agaccactat gggcaatgga
      121 gaaattacca ttgctgaaaa aggtaagatt agtattggca aagattgtat gctggcacat
      181 ggatatgaaa ttagaaatac tgatatgcat ccaatttatt ctttagaaaa tggcgaacga
      241 ataaaccatg gtaaagacgt tattatcggt aatcacgtgt ggcttggccg caatgttact
      301 atattaaaag gtgtatgtat tccaaataat gtagttgtag gttctcatac tgtgctatat
      361 aaaagtttta aagaacctaa ttgtgtaata gcaggttcac ctgcaaaaat agtaaaagaa
      421 aatattgtat ggggaagaaa aatgtatcat tcaactatgt atgatgaccc tactttaaat
      481 gaattttata aataa
//
LOCUS       DAWEYF010000274          460 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.274, whole genome shotgun sequence.
ACCESSION   DAWEYF010000274 DAWEYF010000000
VERSION     DAWEYF010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.274"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            1..434
                     /locus_tag="WGN93_002010"
                     /pseudo
     CDS             1..434
                     /locus_tag="WGN93_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
BASE COUNT          172 a           87 c          104 g           97 t
ORIGIN      
        1 aaaaaaggcg acaccctgct ttccgaaagc ggtgcaaaac agacggttca aaacattacc
       61 ctcaaacagc agccgctcaa agcctacaat ctgaccgttg ccgactggca tacctacttc
      121 gtcaagggta atcaggcgga acggaagggg tttgggttca taatgcgtgt ccgccaagaa
      181 aaacaccatc tacccccgta tatgggaatg attcagaagc atatgcagca gcaaagaaat
      241 tgggatatag aaaaataaaa gaaagaacga gaaatgatgc tgctattttt aaaaaaggaa
      301 agagttatat atcacgcgat gtagattcac ataatggagg ggcttggaaa gaagcatctt
      361 cacccaagaa gctgaacaga aaagaaacaa gaaacggtac atttgataaa aacctaaatc
      421 gtattggaga ttaattatga tgtgcgagtt caaggatttt
//
LOCUS       DAWEYF010000275          457 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.275, whole genome shotgun sequence.
ACCESSION   DAWEYF010000275 DAWEYF010000000
VERSION     DAWEYF010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.275"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(379..454)
                     /locus_tag="WGN93_002011"
     tRNA            complement(379..454)
                     /locus_tag="WGN93_002011"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(419..421),aa:Ala,seq:tgc)
BASE COUNT          111 a           95 c           85 g          166 t
ORIGIN      
        1 gcctaacatt ccgttgacta gaacatcaga cttgaatttc ctactttgat aaagcttact
       61 gctttgttgt gtcttaatcc tgccttttgt gtttcaggat taagtcgata caatcatcac
      121 ccaaatacgg tgtttgtttt cttttctctt gtgagcgatt ttttatcctt tgcaaagaat
      181 aaaaaatcaa aacaaacgct ttgtctttgt ttgttgattt cggctttcca atttgttaaa
      241 gatcgatgcg ttcgatattg ctatctactg tgcaaatcaa aacgagctga ttattatatc
      301 agcattttgt tcttggtcaa gtgtgacgtc tccctgaatg gattctgttc cattcttccg
      361 ttttgatttg tacagtattg gtggaggcaa acgggatcga accgatgacc ccctgcttgc
      421 aaagcaggtg ctctaccaac tgagctatgc ccccatt
//
LOCUS       DAWEYF010000276          450 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.276, whole genome shotgun sequence.
ACCESSION   DAWEYF010000276 DAWEYF010000000
VERSION     DAWEYF010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.276"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(38..250)
                     /locus_tag="WGN93_002012"
     CDS             complement(38..250)
                     /locus_tag="WGN93_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ0227860.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
BASE COUNT           96 a          125 c          118 g          111 t
ORIGIN      
        1 gcacttgaaa tccgaatcca agggcatttt tgccgcttta tttcaacgcg gcatcatagc
       61 cgccgtcttc aacggcttca atcaacgccc ctgcatcggt ttgcgcgggg tcgtatccga
      121 cggtcgcgct tttgttttca aggctgactt cgacgcttgc cacgcctttt acgccttcca
      181 atatccgggt aacgcttttg acgcagccgc cgcagctcat gccgccgatg tcgaggataa
      241 gggtttccat cattttcctt tcgttggaac tgcaatctga cgggcgttat tgtaagtcgg
      301 ggcgtgaact tgggcaaacg cggaaacggt gcggcggttt ggaaaaagac ggacgcttgc
      361 gcataatggc ggcaattccc atcaggacga caacaatgaa cgcttcacaa aaaccctggt
      421 tgagcatcat cgccttggca atcggcgcat
//
LOCUS       DAWEYF010000277          436 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.277, whole genome shotgun sequence.
ACCESSION   DAWEYF010000277 DAWEYF010000000
VERSION     DAWEYF010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.277"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           86 a           98 c          128 g          124 t
ORIGIN      
        1 gggatttagg gctaatctag tacagcccct tagatttaat tcactatacc tgcgtaatgg
       61 tatcgggtac tcatcatcaa cctgccttgc attcggttgt gttgtccggc aactgtccgg
      121 ttgtgtcgat gggttgccct gccgctccct gtgctgcgca acggttgtgt gccttgggtg
      181 ggcgcgggtg gcggccgggc ggtttgttgc tatgatacgg gagttccgat atacaagggt
      241 gggcttcagc ccaccaatca acgaccgaaa aagaaaaaac gttgggctga agcccactct
      301 acgcaattac gcaactgtta tcgtggggat gacgggattt taggtttttg tttttctgtt
      361 tttgcgggaa ggatgggttt taggttgcgg tcatttatcg gaaaagcaga aatcgctccg
      421 ccgtcattcc cgcgaa
//
LOCUS       DAWEYF010000278          422 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.278, whole genome shotgun sequence.
ACCESSION   DAWEYF010000278 DAWEYF010000000
VERSION     DAWEYF010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.278"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(344..419)
                     /locus_tag="WGN93_002013"
     tRNA            complement(344..419)
                     /locus_tag="WGN93_002013"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(384..386),aa:Ala,seq:tgc)
BASE COUNT          123 a           83 c           75 g          141 t
ORIGIN      
        1 gtttacctac ccgttgacta gggaagtaaa cttgaaattc ctactttgat aaagcttact
       61 gctttgttgt gtcttaatcc tgccttttgt gtttcaggat taagtcgata caatcatcac
      121 ccaaatactg tgtttgtttt cttttctctc gcgagagatt tttacccttt gcaaaaggta
      181 aaaatcaaaa caaactcatt gtctttgttt gttgatttcg gctttccaat ttgttaaaga
      241 tcgatgcgtc gttattttac tccgcaaatc aaaataagtt gctataaaat ataaaagtac
      301 aaataaaata aaagcaacag gattactttg atttgcaaag ttttggtgga ggcaaacggg
      361 atcgaaccga tgaccccctg cttgcaaagc aggtgctcta ccaactgagc tatgcccccg
      421 tt
//
LOCUS       DAWEYF010000279          417 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.279, whole genome shotgun sequence.
ACCESSION   DAWEYF010000279 DAWEYF010000000
VERSION     DAWEYF010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.279"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>417
                     /locus_tag="WGN93_002014"
     CDS             <1..>417
                     /locus_tag="WGN93_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ0227861.1"
                     /translation="GQDAYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGL
                     DSVDDIVIRKDACHLNQDLGKSLLDLGFKKIPSVYPEYEAYEDKRSIPENPYIHELQY
                     IKKGENPAIITHQNYHRYGENDYSTDIGSCINGFTV"
BASE COUNT          140 a           73 c           85 g          119 t
ORIGIN      
        1 ccgggcagga tgcttactcc attaatttga tagagattag cgtctattac aaaaaaaccg
       61 accaaggttg ggttcttgag ccatacaacc agcaaaacaa agcacacttt attcaatttc
      121 tacgcgatgg tttggatagc gtggacgata ttgttatccg aaaagatgcg tgtcatttga
      181 atcaagactt aggaaaatcg ttgcttgatt tgggatttaa aaaaatcccg tctgtctatc
      241 ctgaatatga agcttatgaa gataaaaggt cgattcctga aaacccatat attcatgaac
      301 tacagtatat taagaaagga gaaaatccgg cgattattac tcatcagaac tatcataggt
      361 atggagagaa cgattacagt actgatatag gttcctgtat taacggtttc acggtac
//
LOCUS       DAWEYF010000280          413 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.280, whole genome shotgun sequence.
ACCESSION   DAWEYF010000280 DAWEYF010000000
VERSION     DAWEYF010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.280"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT          122 a          102 c          108 g           81 t
ORIGIN      
        1 cataagttcc cgtgcggaca gacctagatt cccacctgcg tgggaatgac gatgcagaag
       61 ttgcccgaaa ctcaaaaaaa acgaaaccga acgaaccgga ttcccgcttt cgcgggaatg
      121 acggcgcata agttcccgtg cggacagacc tagattccca cctgtgtggg aatgacgatt
      181 cagaagttgc ccgaaaccaa aaaactgaag ccgaacggtc tggattcccg ctttcgcggg
      241 aatgacggca tatcagtttc tgtgcggaca aacctggatt cccatctgcg taggaatgac
      301 gatgcagaag ttgcccgaaa ctcaaaaaaa acgaaaccga acgaaccgga ttcccgcttt
      361 tacgggaatg acgggatttt gggttgtggt aatttatcgg gaaaacggaa acc
//
LOCUS       DAWEYF010000281          405 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.281, whole genome shotgun sequence.
ACCESSION   DAWEYF010000281 DAWEYF010000000
VERSION     DAWEYF010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.281"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(178..>405)
                     /locus_tag="WGN93_002015"
     CDS             complement(178..>405)
                     /locus_tag="WGN93_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227862.1"
                     /translation="NVRISGFFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQSM
                     SVFGSNTAATGGNVDANTQSVQQPLLVTPSA"
BASE COUNT          131 a           80 c           78 g          116 t
ORIGIN      
        1 atagtacggt aaggcgaggc aacgctgtac tggtttttgt gaatccacta tattgctaga
       61 agtgcaccga ttaaggttaa ttaaaatacg acccttatcc caatattaag aaaaacagca
      121 atcaaaataa acttgattgc tgtttttcag tttaagccat gaatgtgatt aggctcctta
      181 tgcagatggc gttaccaata acggctgctg tacggattgt gtattggcat ccacatttcc
      241 tcctgtcgca gcagtattag aaccgaacac agacatagac tgtaccaaat tattgccagc
      301 attaatatac ttggcaaaat ctggattact gatagctgca tcatcaaaga caaatgtatc
      361 tacacgatgg ttttcaccat agaagaatcc ggaaatacgt acgtt
//
LOCUS       DAWEYF010000282          402 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.282, whole genome shotgun sequence.
ACCESSION   DAWEYF010000282 DAWEYF010000000
VERSION     DAWEYF010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.282"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            108..323
                     /gene="rpmE"
                     /locus_tag="WGN93_002016"
     CDS             108..323
                     /gene="rpmE"
                     /locus_tag="WGN93_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEZ0227863.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT          124 a          105 c           74 g           99 t
ORIGIN      
        1 attttatcga atatcctctt gacgaaacaa cagaaaatag cgagaatgcc gagcttgtct
       61 gaagcatagg tacatcccct atgcccgctt ttttgaaagg aaatcaaatg aaacaaggta
      121 ttcacccgaa ctaccacgaa gtcaacgtta cctgctcttg cggcaacaaa ttcgcaacca
      181 aatccgcgat ggaaaaagaa aacttcaata tcgaggtttg ctccctgtgc cacccgttct
      241 ataccggcac ccaaaaaatc gtcgatacca ccggccgcgt ggacaaattc aacaacaaat
      301 tcggcaacct gttcaaacgc tgattgccgt tttgcaagaa ttaagccctg ccatcatttc
      361 gatggcaggg ctttttaata tttggcacac tgacttctta tc
//
LOCUS       DAWEYF010000283          392 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.283, whole genome shotgun sequence.
ACCESSION   DAWEYF010000283 DAWEYF010000000
VERSION     DAWEYF010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.283"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            10..>392
                     /locus_tag="WGN93_002017"
     CDS             10..>392
                     /locus_tag="WGN93_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEZ0227864.1"
                     /translation="MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASLQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLA"
BASE COUNT           81 a           88 c          125 g           98 t
ORIGIN      
        1 cgggggtttt tgctttgccc ggaaaaaatg tcggggatgg cgggacagta tccgtacggc
       61 gtccggtcgg gtttgcggag gaacggcttg aaactttggg atattcattt tagaatgacc
      121 cgttttatcg tcgcaagatg cggtttattg tttgcaaccc ttaaaggaaa aaccatgaag
      181 aaaatgttcg tgctgttctg tatgctgttc tcctgcgcct tctcccttgc ggcggtaaac
      241 atcaatgcgg cttcgctgca ggagttggag gcgctgccag gcataggccc ggcgaaggcg
      301 aaggccattg cggaataccg tgcgcaaaac ggtgcgttca agtctgtgga cgatttgacc
      361 aaggtgaagg gcatcggccc tgcggtgctg gc
//
LOCUS       DAWEYF010000284          391 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.284, whole genome shotgun sequence.
ACCESSION   DAWEYF010000284 DAWEYF010000000
VERSION     DAWEYF010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.284"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>391
                     /locus_tag="WGN93_002018"
     CDS             <1..>391
                     /locus_tag="WGN93_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227865.1"
                     /translation="LNRQRTRYLREHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSL
                     ITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEKGLKVEKAS
                     AAVVDATIIQTAGSKQRQAIEVDNKGQV"
BASE COUNT          104 a          123 c           84 g           80 t
ORIGIN      
        1 ctgaatcgtc aaagaacccg ttaccttaga gagcaccgcg gccgtcccgc ctatcccctg
       61 ttgtccatgt tcaaagccgt cctgctcgga caatggcaca gtctctccga tcccgaactc
      121 gaacacagcc tcattacccg catcgatttc aacctgtttt gccgttttga cgaactgagc
      181 atccccgatt acagcacctt atgccgttac cgcaactggc tggcgcaaga cgacaccctg
      241 tccgaattgc tggaactgat taaccgccaa ctgaccgaaa aaggcttaaa agtagagaaa
      301 gcatccgccg ctgtcgttga cgccaccatt attcagaccg ccggcagcaa acagcgtcag
      361 gctatagaag tcgataacaa aggacaagtc a
//
LOCUS       DAWEYF010000285          390 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.285, whole genome shotgun sequence.
ACCESSION   DAWEYF010000285 DAWEYF010000000
VERSION     DAWEYF010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.285"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT          138 a           81 c           88 g           83 t
ORIGIN      
        1 aaaaaaaacg aaatcgaacg gactggattc ccgcctgcgc gggaatgacg agtcagaagt
       61 tactcgaaac ttaaaaaacc gaaatcgaac gaattggatg gattcccgcc tgcgcgggaa
      121 tgacgattga tacgtttcga taatttattg aaaatggctg aaatccaaag ttacagaaat
      181 ttataaacaa aaaacagcaa cccgctgccg tcattcccgc gaaagcggga atccagtccc
      241 ttgatcttaa gataatcttt aattcgtcat tcctgaaaaa gcgggaatcc ggaagcgaaa
      301 agtggtggga atgtattaga aatgactgaa actcaaaaaa ccggattccc gcctacgcgg
      361 gaatgacgag tcagaagtta ctcgaaactt
//
LOCUS       DAWEYF010000286          376 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.286, whole genome shotgun sequence.
ACCESSION   DAWEYF010000286 DAWEYF010000000
VERSION     DAWEYF010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.286"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(182..>376)
                     /locus_tag="WGN93_002019"
     CDS             complement(182..>376)
                     /locus_tag="WGN93_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ0227866.1"
                     /translation="RGEDGFKPDNAGHHSRLAYAQAGGIVEPFFISNDTDLALFKTTK
                     WGICRAIADAIAMKLGAARV"
BASE COUNT           87 a           99 c           89 g          101 t
ORIGIN      
        1 cgcgccgccc gttttgcggc tgccacgcct gagtttctta aatttgggcg tggataggtg
       61 tgtatcggac gaacatttgg catctgtata agtgcgcggt ttacctgctc attactagga
      121 ttttctccaa tcaattttgt aagaaaatag gaagcagctt ctttcaattt accaataata
      181 ttcatactct tgccgccccc aatttcatcg caatcgcgtc cgcaatcgcg cggcagatgc
      241 cccatttggt cgtcttaaac aaggccaaat cagtgtcgtt gctgatgaaa aaaggctcaa
      301 caatgccgcc agcctgcgca taagccaggc gcgaatgatg gcccgcattg tcgggtttaa
      361 agccgtcttc gccgcg
//
LOCUS       DAWEYF010000287          366 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.287, whole genome shotgun sequence.
ACCESSION   DAWEYF010000287 DAWEYF010000000
VERSION     DAWEYF010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.287"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>366
                     /locus_tag="WGN93_002020"
     CDS             <1..>366
                     /locus_tag="WGN93_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227867.1"
                     /translation="YRNRLAQDDTLSELLKLINRQLTEKGLKIEKASAAVIDATIIQT
                     AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLH
                     ITPANAHECKHLPPLLEGIA"
BASE COUNT          121 a          105 c           83 g           57 t
ORIGIN      
        1 taccgcaacc ggctggcgca agacgacacc ctgtccgaat tgctcaaact gattaaccga
       61 caactgaccg aaaaaggttt aaaaatagag aaagcatccg ccgccgtcat tgacgccacc
      121 attattcaga ccgctggcag caaacagcgt caggccatag aagttgacga agaaggacaa
      181 atcagcggcc aaaccacacc gagtaaggac agcgatgccc gttggataaa gaaaaacggc
      241 ctctacaaac tcggttacaa acaacatacc cgtaccgatg cggaaggcta tatcgagaaa
      301 ctgcacatca cccccgccaa tgcccatgag tgcaaacacc tgccgccgtt gttagaaggg
      361 atagct
//
LOCUS       DAWEYF010000288          364 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.288, whole genome shotgun sequence.
ACCESSION   DAWEYF010000288 DAWEYF010000000
VERSION     DAWEYF010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.288"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..283)
                     /locus_tag="WGN93_002021"
     CDS             complement(<1..283)
                     /locus_tag="WGN93_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEZ0227868.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPIIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPAGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPS"
BASE COUNT           97 a           91 c          108 g           68 t
ORIGIN      
        1 aagaaggaac gtatgtaccc gaaacggcag gtgcagacgg cggaacataa gcaggaggcg
       61 tataaaccgg cgcgctttgc accggcggca cataaggcgc atcgccggca ggagccgggc
      121 tgtacggcgt tgctccatag gggttgttgt aaactgccga agacggcgcg tcctgcatac
      181 ctgaattgcc tgcaatgatg ggggcaggct gctgggtagc acaaccgccc aacagtgcgg
      241 caaaggaggc gcaagccgcc aaaagtgtcg tttgtttcaa cataagataa ccttcatgtt
      301 ccgatatata gcctgaatgc ggtatatcat aataaaaatg cgcgttcttc tcaagcgcaa
      361 agcc
//
LOCUS       DAWEYF010000289          351 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.289, whole genome shotgun sequence.
ACCESSION   DAWEYF010000289 DAWEYF010000000
VERSION     DAWEYF010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.289"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            26..>351
                     /locus_tag="WGN93_002022"
     CDS             26..>351
                     /locus_tag="WGN93_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ0227869.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNSAAGKAATGIEALSTVKNKRWCQ
                     VLSKAVA"
BASE COUNT           91 a           81 c          105 g           74 t
ORIGIN      
        1 aatcaatatt ttttggagat gatgaatggg caaaaccgta accttaaccg ctggacacag
       61 caacaccgac ccgggtgcgg tcaacggcag cgaccgtgag gcggacttgg cgcaggatat
      121 gcgcaacatc gtggctgcta ttttgcgcga tgactacggt ttgactgtta aaaccgacgg
      181 cacaggcaaa ggcaatatgc cgctgcgtga agctgtaaaa ctgattcgcg gctcggatgt
      241 ggcgattgag ttccatacca actcggcggc cggtaaagca gctacgggca ttgaggcgtt
      301 gagtaccgtt aaaaacaaac gctggtgtca ggtgttgagc aaagctgttg c
//
LOCUS       DAWEYF010000290          351 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.290, whole genome shotgun sequence.
ACCESSION   DAWEYF010000290 DAWEYF010000000
VERSION     DAWEYF010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.290"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           92 a           91 c           70 g           98 t
ORIGIN      
        1 gttcccacgg tcaggatttc agattgcgga catctgtcag aaaagacaaa aaaccttccg
       61 ccgtcattcc ctacaggcga gaatccgatc cgttgaaatt cggttgtttt aaataaattc
      121 ttgcagcttt gattttctgt ttttccgata acgccgtaac tttgaaacgc gaaagcggta
      181 atccgatccg ttgggatttt gcaacttcaa atcaatccgc aaactgaaat cccgtcattc
      241 ccgcgcagtc gtgaatccga acgcgtccgc acgaaaacct gcatcccgtc attcccacgg
      301 aagtgggaat ccagtttttt gagtttcagt cattcccgat aaattgcctt a
//
LOCUS       DAWEYF010000291          347 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.291, whole genome shotgun sequence.
ACCESSION   DAWEYF010000291 DAWEYF010000000
VERSION     DAWEYF010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.291"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT          122 a           85 c           63 g           77 t
ORIGIN      
        1 actcattagt tacctaaaac ttaaaaaaca gaaaccttta cgccgtcatt cccacgaaag
       61 tgggaatcta gaacccaaat gctaaggcga tttatcggaa acggctgaaa ccgaacgaat
      121 tggattcccg cctgcgcagg aatgacaact cattagttac ctaaaactta aaaaacagaa
      181 acctttacac cgtcattccc acgaaagtgg gaatctagaa cccaaatgct aaggcgattt
      241 atcggaaacg gctgaaaccg aatgaattgg attcccgcct gtgcgggaat gacgacttat
      301 tagttaccta acacttaaaa aacagaaacc tttccgcgtc attccca
//
LOCUS       DAWEYF010000292          346 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.292, whole genome shotgun sequence.
ACCESSION   DAWEYF010000292 DAWEYF010000000
VERSION     DAWEYF010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.292"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..152)
                     /locus_tag="WGN93_002023"
     CDS             complement(<1..152)
                     /locus_tag="WGN93_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227870.1"
                     /translation="MKKSLIALALSVLKPQMPEFEIKPASIGYLKQHPSMRLGKSGVA
                     AAKRAAR"
     gene            complement(149..>346)
                     /locus_tag="WGN93_002024"
     CDS             complement(149..>346)
                     /locus_tag="WGN93_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ0227871.1"
                     /translation="RGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAAKV"
BASE COUNT           85 a          104 c           81 g           76 t
ORIGIN      
        1 cgcgccgcgc gtttcgcggc tgccacgccc gacttgccta ggcgcataga cggatgttgt
       61 ttcaaatagc caatactggc aggcttaatc tcaaattcag gcatctgcgg tttcaagaca
      121 gacagagcca aagcaatcaa agactttttc ataccttcgc cgctcccaat tccatcgcaa
      181 tcgcgtccgc aatcgcgcgg cagatgcccc atttagtagt cttaaacaag gccaaatcag
      241 tgtcgttgct gatgaaaaaa ggctcaaaca caatgccacc tgcctgcgca taagccaggc
      301 gcgaatgctg gcccgcattg tctggtttaa agccgtcttc gccgcg
//
LOCUS       DAWEYF010000293          338 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.293, whole genome shotgun sequence.
ACCESSION   DAWEYF010000293 DAWEYF010000000
VERSION     DAWEYF010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.293"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            33..>338
                     /locus_tag="WGN93_002025"
     CDS             33..>338
                     /locus_tag="WGN93_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227872.1"
                     /translation="MLGFRLSGGKGILQRSQVALVVMESTGGLEIPAAKAIRRAGIAV
                     IIANPRQTHQFAQSQPLTKTDAKDAKMPAFFAQMTAQKEDSQTMPYQPPTEAEEVLEA
                     "
BASE COUNT           91 a           98 c           94 g           55 t
ORIGIN      
        1 gaggtgtttg gggcgaaaac agccgaaaac ctgtgttggg gtttcggctg tcgggaggga
       61 aaggaatttt gcaaaggtct caggtcgcac tcgtcgtgat ggaaagtacc ggaggtctcg
      121 aaatccccgc cgccaaagcc atccgccgag caggcatagc cgtgattatc gccaacccgc
      181 gtcagacgca tcagtttgcc caatcgcagc cgctgaccaa aaccgacgcc aaagatgcca
      241 aaatgcccgc cttcttcgca cagatgacgg cacagaaaga agattcgcaa accatgccct
      301 accaaccgcc caccgaagcg gaagaagtgt tggaagcc
//
LOCUS       DAWEYF010000294          331 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.294, whole genome shotgun sequence.
ACCESSION   DAWEYF010000294 DAWEYF010000000
VERSION     DAWEYF010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.294"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            41..331
                     /locus_tag="WGN93_002026"
                     /pseudo
     CDS             41..331
                     /locus_tag="WGN93_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
BASE COUNT          103 a           93 c           71 g           64 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat actttatgcc gctaccgcaa
       61 ctggcggctc aagacaatac cctgtccgaa ttgctcaaac tgattaaccg acaactgacc
      121 gaaaaaggcc taaaagtaga gaaagcatcc gccgccgttg ttgacgccac cattattcag
      181 accgccggca gcaaacagcg tcaggctata gaagtcgatg aagaaggaca agtcagcggc
      241 caaaccacac cgagtaaaga cagcgatgcc cgttggataa agaaaaacgg cctctacaaa
      301 ctcggttaca aacaacatac ccgtaccgat g
//
LOCUS       DAWEYF010000295          331 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.295, whole genome shotgun sequence.
ACCESSION   DAWEYF010000295 DAWEYF010000000
VERSION     DAWEYF010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.295"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           96 a           73 c           95 g           67 t
ORIGIN      
        1 gctaagtgcg cccgctgccg cctaaaagga gaccggatgc ctgattatcg ggtatccggg
       61 gagggttaag ggggtatttg ggtaaaatta ggaggtattt ggggcgaaaa tagacgaaaa
      121 cctgtgtttg ggtttcggct gtcgggaggg aaaggaattt tgcaaagatc tcatcctgtt
      181 attttcacaa aaacagaaaa ccaaaaacag caacctgaaa ttcgtcattc ccgcgcaggc
      241 gggaatccag acccccaacg cggcaggaat ctatcggaaa taaccgaaac cggacgaacc
      301 tagattcccg ctttcgcggg aatgacggca g
//
LOCUS       DAWEYF010000296          325 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.296, whole genome shotgun sequence.
ACCESSION   DAWEYF010000296 DAWEYF010000000
VERSION     DAWEYF010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.296"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>325
                     /locus_tag="WGN93_002027"
     CDS             <1..>325
                     /locus_tag="WGN93_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ0227873.1"
                     /translation="KSQIKFQSSNNLKSSGFKLDSSSKSFAKFIEAANFEHIPTGAKA
                     RINAKITASVSRAGVLAGVGLGAKFSTKAVPYVGTALLAHDVYETFKEDIQAQGYQYD
                     PETDKF"
BASE COUNT          111 a           77 c           66 g           71 t
ORIGIN      
        1 aaatcacaaa ttaaatttca atcaagtaat aatttaaaat caagtggttt taaattagat
       61 tcaagttcta agagttttgc caaattcata gaagcggcaa attttgagca catccctacg
      121 ggcgcaaaag cccgaatcaa cgcaaaaata accgccagcg tatcccgcgc cggcgtattg
      181 gcgggggtcg gcttaggcgc gaaattcagc acaaaggcgg ttccctatgt cggaacagcc
      241 cttttagccc atgacgtata cgaaactttc aaagaagaca tacaggcaca aggctaccaa
      301 tacgaccccg aaaccgacaa atttg
//
LOCUS       DAWEYF010000297          318 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.297, whole genome shotgun sequence.
ACCESSION   DAWEYF010000297 DAWEYF010000000
VERSION     DAWEYF010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.297"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           90 a           88 c           66 g           74 t
ORIGIN      
        1 acggaaacct gcaccgcgtc attcccacga acccacatcc cgtcattacc acgaaagcgg
       61 gaatctagga cgcagggtta agaaaacctg catcccgtca ttcctcaaaa acagaaaacc
      121 aaaatcagaa acctaaaatc ccgtcattcc cgcgcaggcg ggaatctagg tctgtcagtg
      181 caggaactta tcggataaaa cggtttcttg agattttaca tcctggattc ccactttcgt
      241 gggaatctag aatctcggac tttcagataa tctttgaata ttgccgctgc cttaaggtct
      301 agattcccgc ctgcgcgg
//
LOCUS       DAWEYF010000298          315 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.298, whole genome shotgun sequence.
ACCESSION   DAWEYF010000298 DAWEYF010000000
VERSION     DAWEYF010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.298"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           88 a           82 c           67 g           78 t
ORIGIN      
        1 ctttcgtggg aatgacggga tttgagattg cggcatttac cggaaaaaac agaaaccgct
       61 ctgccgtcat tcccgcgcag gcgggaatct agaccttaga acaacagtaa tattcaaaga
      121 ttatctgaaa gtccgggatt ctggattccc actttcgtgg gaatgacggc atcagtctgc
      181 cgtttacagc acggtttctt tagattttac gttctagatt cctgcctgcg cgggaatgac
      241 gaatccatcc atacggaaac ctacaccacg tcattcctac gaacctacat cccgtcattc
      301 ccacaaaaac agaaa
//
LOCUS       DAWEYF010000299          308 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.299, whole genome shotgun sequence.
ACCESSION   DAWEYF010000299 DAWEYF010000000
VERSION     DAWEYF010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.299"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            18..212
                     /gene="thiS"
                     /locus_tag="WGN93_002028"
     CDS             18..212
                     /gene="thiS"
                     /locus_tag="WGN93_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEZ0227874.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFVPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT           85 a           90 c           77 g           56 t
ORIGIN      
        1 agaaacatcg agaaaccatg aacatcatct taaacggcgg acccgccgaa cttcacggca
       61 caagcgttgc cgacctcatc gcccaaaccg cgccgcaaaa gccctttgcc gtggcggtca
      121 acaccgtttt cgtccccaaa ggcgcgtatg cggaaacggt tttaaacgaa aacgacaaaa
      181 tcgatatcgt gcggccggtg gtcggcggct aggcggtttt gccttttcag acgacccctg
      241 tccccaaaac aacgttatgg tggattaact ttaaatcagg acaaggcgac gaagccgcag
      301 acagtacg
//
LOCUS       DAWEYF010000300          296 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.300, whole genome shotgun sequence.
ACCESSION   DAWEYF010000300 DAWEYF010000000
VERSION     DAWEYF010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.300"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           76 a           68 c           92 g           60 t
ORIGIN      
        1 cggaaaaaac agaaaccgct ccgccgtcat tcccgcgcag gcgggaatct aggacgtaaa
       61 atctcaagaa accgttgtac ccgataagtt tccgtgccga caagtccgga ttcccgcctg
      121 cgcgggaatg acggttcagt tgcgtaggac tggattgtga aaaggggcgg attcggtgaa
      181 aacggcggaa atgtgggatt gatggaatcg gtgggctgaa gccctcccta cagagctttc
      241 agacggtatt gtttgcgttt tcgggatggg ggcaaatgaa acgccgacaa accgat
//
LOCUS       DAWEYF010000301          293 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.301, whole genome shotgun sequence.
ACCESSION   DAWEYF010000301 DAWEYF010000000
VERSION     DAWEYF010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.301"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            <1..>293
                     /locus_tag="WGN93_002029"
     CDS             <1..>293
                     /locus_tag="WGN93_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227875.1"
                     /translation="HLLPLLEGIAEGTTVYADKGYDSKENRQHLKEHQLLDGIMRKAC
                     RNRPLSETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLLKVSAQSHL"
BASE COUNT           79 a           79 c           78 g           57 t
ORIGIN      
        1 cacctgttgc ctttgctgga aggtatagcc gaaggcacga ccgtctatgc cgacaaaggc
       61 tacgacagta aggaaaaccg gcagcatctg aaagaacatc agttactgga cggcattatg
      121 cgcaaagcct gccgcaaccg tccgctgtcg gaaacgcaaa ccaaacgcaa ccggtatttg
      181 tcgaagaccc gttatgtggt tgaacagagc ttcggtacgc tgcaccgtaa attccgctat
      241 gcgcgggcag cctatttcgg gctgctcaaa gtgagtgcgc aaagccatct gaa
//
LOCUS       DAWEYF010000302          282 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.302, whole genome shotgun sequence.
ACCESSION   DAWEYF010000302 DAWEYF010000000
VERSION     DAWEYF010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.302"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(<1..108)
                     /locus_tag="WGN93_002030"
     CDS             complement(<1..108)
                     /locus_tag="WGN93_002030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ0227876.1"
                     /translation="MDLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHL"
BASE COUNT           51 a           71 c           71 g           89 t
ORIGIN      
        1 caggtgtttg cactcatgag cattggcggg ggtaatgtgc agtttctcga tatagccttc
       61 cgcatcggta cgggtatgtt gtttgtaacc gagtttgtag agatccaacg ggcatctttg
      121 tctttactcg gtgtggtttg gccgctgatt tgtccttctt cgtcaacttc tatggcctgg
      181 cgctgtttgc tgccggcggt ctgagacctt tgcaaaactc cccaaaatcc cctaaattcc
      241 caccaagaca tttaggggat gttccatgag caccttcttc cg
//
LOCUS       DAWEYF010000303          276 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.303, whole genome shotgun sequence.
ACCESSION   DAWEYF010000303 DAWEYF010000000
VERSION     DAWEYF010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.303"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           92 a           65 c           65 g           54 t
ORIGIN      
        1 tggatggatt cgtcgttccc gcgaaagcgg gaatccggaa ccagaaacca caaaaattta
       61 tcgggaaaac cgaaactcaa aaacaacgga aaccgaacgg acaggattcc cgcctgcgcg
      121 ggaatgacgg ctcatacatc acccaaaaaa ttgaaaccaa acagatggga ttccctcttg
      181 cgtgaggctg acagatgccg tctgaaagac tttcagacgg catagctttt tctctttgaa
      241 tttatagtgg attaacaaaa atcaggacaa ggcggc
//
LOCUS       DAWEYF010000304          269 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.304, whole genome shotgun sequence.
ACCESSION   DAWEYF010000304 DAWEYF010000000
VERSION     DAWEYF010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.304"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           59 a           50 c           81 g           79 t
ORIGIN      
        1 atttatcgga aatgaccgaa actgaacgga ctggattccc gcttttgcgg gaatgacggt
       61 tcagttgcta cggttattgt caggtttcgg ttatgttgga atttcgggaa acttatgaat
      121 cgtcattccc gcgcaggcgg gaatctagac cggtcggtgc ggaaacttat cgggaaaaaa
      181 ggtttcttga gattttacgt cctggattcc cactttcgtg ggaatgacgt ggtgcaggtt
      241 cgtaggaatg acgtggtgca ggtttccgt
//
LOCUS       DAWEYF010000305          268 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.305, whole genome shotgun sequence.
ACCESSION   DAWEYF010000305 DAWEYF010000000
VERSION     DAWEYF010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.305"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           64 a           82 c           58 g           64 t
ORIGIN      
        1 aatcttgaaa tccgtcattc ccgcgcaggc gggaatccag acctgtccgc acagaaactt
       61 atcggataaa aacagttgct caaacccctc gttctagatt cccacttccg tgggaatgac
      121 ggttcagttg ctacggcccc gccctacaat acgccttgcg aatctgtccc acgcccgccc
      181 ttgtatgcct caaatgggtt aaactacgca cttcccgact tcccgtttcg ggcaggggta
      241 caggtccgat ttatagtgga ttaacaaa
//
LOCUS       DAWEYF010000306          258 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.306, whole genome shotgun sequence.
ACCESSION   DAWEYF010000306 DAWEYF010000000
VERSION     DAWEYF010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.306"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           61 a           51 c           76 g           70 t
ORIGIN      
        1 ggatgaattc gtcattcccg cgcaggcggg aatctagaca ttcaatgcta aggcaattta
       61 tcgggaatga ctgaaactca aaaaaactgg attcccactt ttgtgggaat ggcgggatgt
      121 aggttcgtgg gaatgacggg atgcaggttt ccgtatggat ggattcgtca ttcccgcgca
      181 ggcgggaatc caggtctgtc ggtgcggaaa cttatcgggt aaaacggttt cttgagattt
      241 tgcgtcttgt attcccac
//
LOCUS       DAWEYF010000307          253 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.307, whole genome shotgun sequence.
ACCESSION   DAWEYF010000307 DAWEYF010000000
VERSION     DAWEYF010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.307"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
     gene            complement(20..>253)
                     /locus_tag="WGN93_002031"
     CDS             complement(20..>253)
                     /locus_tag="WGN93_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ0227877.1"
                     /translation="LIAQKEFEEFVNNVKEYDILESFSYFLNKRVAHNIWKIYFSDES
                     VIFIRKSEENGKTVHEFVYQEYTDSSDFNSMFE"
BASE COUNT           97 a           42 c           26 g           88 t
ORIGIN      
        1 tacaggttca gaataagaat tactcgaaca tagaattaaa atcagaacta tcggtgtact
       61 cttgataaac aaattcatga acagtttttc cattctcttc tgattttctt ataaaaataa
      121 cagattcatc agaaaaataa atcttccaaa tattatgtgc gactctctta tttaaaaaat
      181 aagagaagct ctctaaaata tcgtactctt ttacgttatt aacaaattct tcaaattctt
      241 tctgagcaat taa
//
LOCUS       DAWEYF010000308          251 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.308, whole genome shotgun sequence.
ACCESSION   DAWEYF010000308 DAWEYF010000000
VERSION     DAWEYF010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.308"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           70 a           59 c           59 g           63 t
ORIGIN      
        1 cgcttgttcg gtaaatgaga gggcggatta cgcgcctgtc agataaaccc cgtgtttaaa
       61 cgggcggcaa tgaggtacgc gtagagcctt gaagcgcaat cgatatatta tttccaccaa
      121 aacggacgac cccgcctgcc ttgcaaaccc ttaaaatgaa gccacccgga ttaatccgag
      181 tggccgtgga aaatcactta ccgcttgatt tatttaaaat ttatggtata atttacctta
      241 gctggcagat g
//
LOCUS       DAWEYF010000309          250 bp    DNA     linear   BCT 15-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain 2590STDY5562160 isolate 3086
            SAMEA2145162-rid20302363.denovo.309, whole genome shotgun sequence.
ACCESSION   DAWEYF010000309 DAWEYF010000000
VERSION     DAWEYF010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2145162
            Sequence Read Archive: ERR369494
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-NOV-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001995237.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001995237.1
            Genome Coverage       :: 216x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/22/2023 19:01:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,031
            CDSs (total)                      :: 1,979
            Genes (coding)                    :: 1,897
            CDSs (with protein)               :: 1,897
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 15 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2145162-rid20302363.denovo.309"
                     /strain="2590STDY5562160"
                     /serovar="W"
                     /isolate="3086"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="Ghana"
                     /collection_date="2010"
BASE COUNT           75 a           54 c           63 g           58 t
ORIGIN      
        1 gaatgacggg atgtgggttc gtgggaatga cgaagtagaa gttacccgaa atttaaaaca
       61 agcgaaaccg aacgaactgg attcccgctt tcgtgggaat gacggcggag cggtttctgc
      121 ttttcccaat aaatgcccca acctaaaatc cgtcattcct gcgcaggcgg gaatctagac
      181 attcaatgct aaggcaattt atcgggaatg actgaaactc aaaaagctag attcccactt
      241 tcgtgggaat
//
